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Schistosoma mansoni
cluster # 10644 cluster # 10644       Sequences # 19       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10644#0 length = 1725 sequences # 16  
consensus_10644#1 length = 468 sequences # 1  
consensus_10644#2 length = 234 sequences # 1  
consensus_10644#3 length = 204 sequences # 1  

consensusID : consensus_10644#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 16
consensus length = 1725
fasta sequence
                              [TGCTGAGCTCAATGCTTTAAATCCGCGTTCATTCTTTTATTGGGTTTAAGTTTATTATATTATCGAGTTAGCTGAGTCAACAAACATCTTCAACTATACCTTTTTTCACCACTTTCCAACAAAATCCTACACAAAACCTTATTTAGAGACCGTAGTTGACCGAACGGTAAAGCTGTTTAGAGCTCTTTCATAATAACACACAAGCTACTCAGAAGTATAGATACATTGCTTGCAAAACCACGACTAAGAGGCGAAACATCTTGGCAGAAAGCTGGTAGAAAAATGGCCCTCAGTTTTAGATCTTCTAAATACTTACTCATAACTCTAAACTTACTCTACCTAGTTATTGCTTTCATTCTTGTTGGCGTTGCTGCATATGCCCGGCTAAGCATTTATGTGACGAGCGTTCATATTGTTGGTGGTATAATAGCTTGTGGAGTCTTCCTCTTTGTGCTTGCTGTAGCTGGATTGTTGGGCGCTATCAAACATAACCAGCCAATATTATTTTTCTATATAATCCTACTTTTCGGCCTCTTTCTCGTCCAATTTTCTGTAGCATGCGCTTGTCTATCACTCTCTAGTGATTATCAACAGATTTTAGTTGAGACAGCGTGGAAACAAAGCTCCAATAACTCAAAACTAACTG-TCATGACGGCGTTTAAATGCTGTGGTTTCAGTAGATCCGATCTGTCTTCATCTGCCGCATTGGGATATCCCCCGTGCAAGTTAGCCAAGCTGTCTTGCTGCGATACACCTGAGGGTGAAACTGCTAAATGCTGCCAAGGTTCAGATGTGGGGAATAGCACGTTCTGCCCATGTACTACAGCTTGTTGGACTGTAATTCAAGAACGGTTATCAACTGGTGTCCGAGTTACTGGTGCCACTAGCCTTTTCTTCAGCGTCATTGAACTTTTAGGAGTATGGACGGCTCTTCGCTATCGGCACCAACGTGATCCCTTACTTGATCCAAACAGTGTTCTCTGAATTGTCTTCTCCATATTCATTGTCATTACTATTATTATCATCAGTACTATTGCCATATCATATAGCTCTGTAACACATCATGGATGCCTGACAGGTTAATTTTATAACATGAAGTAACATTTTCTAGTCATAAATACTATTGAAACAATCTTAAGTTCACCCGTTTCTTTGCGTGTTTGTATGCA-TTATTGCTTTAATTGTTTTCATCTATCCCAATTTATAATCAGTATTATCTTCACGAGTGATAAAAGCCTCCGTAAGTCCATTATCATTTGTTCAATGACTTCATTTCTAATCTAAACTCGAGAAACAAACTAGTCTTTGCACACACAAATTTGTGCACATTTATCTGTTTTTCACTCCATACTTGTGTCTGTACGCAACGATTATCTTCATTAAGGTCACTGTGATCTCAAATCACCTGAAGAGATTCATTAAACGTAAAATAGATTTCTTGTAAATAATAGTCTTCATCCTTTTTTTATTGATGTTCGTGCATGCGCTAAGTGAAGCCTGATGGATCGTACGAAAATTTTAACGATACATATATTGACTATTGACAGTTTTCGACTGGTTATTGGTCATTTTTGAGTTACGATTCCATAAGTCTATATGTTAGCTTTTTTTCATATTGATCGATCAGTTCTCAATGTTCTTCATATTATTTGCTAATAACCCATGTTTATTGTTGGTTTTTCTCACTCAGCTGTATAACAATCATTCTAAAAAAAAAAAAAAAAA]

[+] EMBL AW017053             [TGCTGAGCTCAATGCTTTAAATCCGCGTTCATTCTTTTATTGGGTTTAAGTTTATTATATTATCGAGTTAGCTGAGTCAACAAACATCTTCAACTATACCTTTTTTCACCACTTTCCAACAAAATCCTACACAAAACCTTATTTAGAGACCGTAGTTGACCGAACGGTAAAGCTGTTTAGAGCTCTTTCATAATAACACACAAGCTACTCAGAAGTATAGATACATTGCTTGCAAAACCACGACTAAGAGGCGAAACATCTTGGCAGAAAGCTGGTAGAAAAATGGCCCTCAGTTTTAGATCTTCTAAATACTTACTCATAACTCTAAACTTACTCTACCTAGTTATTGCTTTCATTCTTGTTGGCGTTGCTGCATATGCCCGGCTAAGCATTTATGTGACGAGCGTTCATATTGTTTGTGGTATAATAGCTTGTGGAGTCTTCCTCTTTGTGCTTGCTGTAGCTGGATTGTTGGGCGCTATCAAACATAACCAGCCAATATTATTTTTCTATATAATCCTACTTTTCGGCCTCTTTCTCGTCCAATTTTCTGTAGCATGCGCTTGTCTATCACTCTCTAGTGATTATCAACAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD184163             [                                                   cttcgcgATTATCGAGTTAGCTGAGTCAACAAACACCTTCAACTATACCTTTTTTCACCACTTTCCAACAAAATCCTACACAAAACCTTATTTAGAGACCGTAGTTGACCGAACGGTAA        AGAGCTCTTTCATAATAACACACAAGCTACTCAGAAGTATAGATACATTGCTTGCAAAACCACGACTAAGAGGCGAAACATCTTGGCAGAAAGCTGGTAGAAAAATGGCCCTCAGTTTTAGATCTTCTAAATACTTACTCATAACTCTAAACTTACTCTACCTAGTTATTGCTTTCATTCTTGTTGGCGTTGCTGCATATGCCCGGCTAAGCATTTATGTGACGAGCGTTCATATTGTTGGTGGTATAATAGCTTGTGGAGTCTTCCTCTTTGTGCTTGCTGTAGCTGGATTGTTGGGCGCTATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD189566             [                                                                                                                            TCCTACACAAAACCTTATTTAGAGACCGTAGTTGACCGAACGGTAAAGCTGTTTAGAGCTCTTTCATAATAACACACAAGCTTCTCAGAAGTATAGATACATTGCTTGCAAAACCACGACTAAGAGGCGAAACATCTTGGCAGAAAGCTGGTAGAAAAATGGCCCTCAGTTTTAGATCTTCTAAATACTTACTCATAACTCTAAACTTACTCTACCTAGTTATTGCTTTCATTCTTGTTGGCGTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD193770             [                                                                                                                                                                                                                                                                                                                                                                                                           TGTGACGAGCGTTCATATTGTTGGTGGTATAATAGCTTGTGGAGTCTTCCTCTTTGTGCTTGCTGTAGCTGGATTGTTGGGCGCTATCAAACATAACCAGCCAATATTATTTTTCTATATAATCCTACTTTTCGGCCTCTTTCTCGTCCAATTTTCTGTAGCATGCGCTTGTCTATCACTCTCTAGTGATTATCAACAGATTTTAGTTGAGACAGCGTGGAAACAAAGCTCCAATAACTCAGAACTAACTG TCATGACGGCGTTTAAATGCTGTGGCTTCAGTAGATCCGATCTGTCTTCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD098439             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TATCAAACATAACCAGCCAATATTATTTTTCTATAT ATCCTACTTTTCGGCCTCTTTCTCGTCCAATTTTCTGTAGCATGCGCTTGTCTATCACTCTCTAGTGATTATCAACAGATTTTAGTTGAGACAGCGTGGAAACAAAGCTCCAATAACTTAAAACTAACTG TCATGACGGCGTTTAAATGCTGTGGTTTCAGTAGATCCGATCTGTCTTCATCTGCCGCATTGGGATATCCCCCGTGCAAGTTAGCCAAGCTGTCTTGCTGCGATACACCTGAGGGTGAAACTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD152722             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GTGATTATCACCAGATNTTAGTTGAGACAGCGTGGAAACAAAGCTCCAATAACTCAAAACTAACTG TCATGACGGCGTTTAAATGCTGTGGTTTCAGTAGATCCGATCTGTCTTCATCTGCCGCATTGGGATATCCCCCGTGCAAGTTAGCCAAGCTGTCTTGCTGCGATACACCTGAGGGTGAAACTGCTAAATGCTGCCAAGGTTCAGATGTGGGGAATAGCACGTTCTGCCCATGTACTACAGCTTGTTGGACTGTAATTCAAGAACGGTTATCAACTGGTGTCCGAGTTACTGGTGCCACTAGCCTTTTCTTCAGCGTCATTGAACTTTTAGGAGTATGGACGGCTCTTCGCTATCGGCACCAACGTGATCCCTTACTTGATCCAAACAGTGTTCTCTGAATTGTCTTCTCCATATTCATTGTCATTACTATTATTATCATCAGTACTATTGCCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD189281             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CAGATTTTAGGTGAGCCAGGGGGGAAACAAAGCTTCCATAACTCAAAACT ACTGTTCA G CGGCGTTTAAATGCTGTGGTTTCAGTAGATCCGATCTGTCTTCATCTGCCGCATTGGGATAT CCNCGTGCAAGTTAGCCAAGCTGTCTTGCTGCGATACACCTGAGGGTGAACCTGCTANATGCTGCCAAGGTTCAGATGTGGGGAATAGCACGTTCTGCCCATGTACTACAGCTTGTTGGACTGTAATTCAAGAACGGTTATCAACTGGTGTCCGAGTTACTGGTGCCACTAGCCTTTTCTTCAGCGTCATTGAACTTTTAGGAGTATGGACGGCTCTTCGCTATCGGCACCAACGTGATCCCTTACTTGATCCAAACAGTGTTCTCTGAATTGTCTTCTCCATATTCATTGTCATTACTATTATTATCATCAGTACTATTGCCATATCATATAGCTCTGTAACACATCATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD060625             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ATGACGGCGTTTAAATGCTGTGGTTTCAGTAGATCCGATCTGTCTTCATCTGCCGCATTGGGATATCCCCCGTGCAAGTTAGCCAAGCTGTCTTGCTGCGATACACCTGAGGGTGAAACCGCTAAATGCTGCCAAGGTTCAGATGTGGGGAATAGCACGTTCTGCCCATGTACTACAGCTTGTTGGACTGTAATTCAAGAACGGTTATCAACTGGTGTCCGAGTTACTGGTGCCACTAGCCTTTTCTTCAGCGTCATTGAACTTTTAGGAGTATGGACGGCTCTTCGCTATCGGCACCAACGTGATCCCTTACTTGATCCAAACAGTGTTCTCTGAATTGTCTTCTCCATATTCATTGTCATTACTATTATTATCATCAGTACTATTGCCATATCATATAGCTCTGTAACACATCATGGATGCCTGACAGGTTAATTTTATAACATGAGGTAACATTTTCTAGTCATAAATACTATTGAAACAATCTTAAGTTCACCCGTTTCTTTGCGTGTTTGTATGCACTTATTGCTTTAATTGTTTTCATCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CD134697             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ACTACAGCTTGTTGGACTGTAATTCAAGAACGGTTATCAACTGGTGTCCGAGTTACTGGTGCCACTAGCCTTTTCTTCAGCGTCATTGAACTTTTAGGAGTATGGACGGCTCTTCGCTATCGGCACCAACGTGATCCCTTACTTGATCCAAACAGTGTTCTCTGAATTGTCTTCTCCATATTCATTGTCATTACTATTATTATCATCAGTACTATTGCCATATCATATAGCTCTGTAACACATCATGGATGCCTGACAGGCTAATTTTATAACATGAAGTAACATTTTCTAGTCATAAATACTATTGAAACAATCTTAAGTTCACCCGTTTCTTTGCGTGTTTGTATGCA TTATTGCTTTAATTGTTTTCATCTATCCCAATTTATAATCAGTATTATCTTCACGAGTGATAAAAGCCTCCGTAAGTCCATTATCATTTGTTCAATGACTTCATTTCTAATCTAAACTCGAGAAACAAACTAGTCTTTGCACACACAAATTTGTGCACATTTATCTGTTTTTCACTCCATACTTGTG                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD153946             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TGGACTGTAATTCAAGAACGGTTATCAACTGGTGTCCGAGTTACTGGTGCCACTAGCCTTTTCTTCAGCGTCATTGAACTTTTAGGAGTATGGACGGCTCTTCGCTATCGGCACCAACGTGATCCCTTACTTGATCCAAACAGTGTTCTCTGAATTGTCTTCTCCATATTCATTGTCATTACTATTATTATCATCAGTACTATTGCCATATCATATAGCTCTGTAACACATCATGGATGCCTGACAGGTTAATTTTATAACATGAAGTAACATTTTCTAGTCATAAATACTATTGAAACAATCTTAAGTTCACCCGTTTCTTTGCGTGTTTGTATGCA TTATTGCTTTAATTGTTTTCATCTATCCCAATTTATAATCAGTATTATCTTCACGAGTGATAAAAGCCTCCGTAAGTCCATTATCATTTGTTCAATGACTTCATTTCTAATCTAAACTCGAGAAACAAACTAGTCTTTGCACACACAAATTTGTGCACATTTATCTGTTTTTCACTCCATACTTGTGTCTGTACGCAACGATTATCTTCATTAAGGTCACTGTGATCTCAAATCACCTGAAGA                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD167422             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GCTATCGGCA CAACGTGATCCCTTACTTGATCCAAACAGTGTTCTCTGAATTGTCTTCTCCATATTCA TGTCATTACTATTATTATCATCAGTACTATTGCCATATCATATAGCTCTGTAACACATCATGGATGCCTGACAGGTTAATTTTATAACATGAAGTAACATTTTCTAGTCATAAATACTATTGAAACAATCTTAAGTTCACCCGTTTCTTTGCGTGTTTGTATGCA TTATTGCTTTAATTGTTTTCATCTATCCCAATTTATAATCAGTATTATCTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL AA999272             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ATATAGCTCTGTAACACATCATGGATGCCTGACAGGGTTATTTTATAACATGAAGTAACATTTTCTAGTCATAAATACTATTGAAACAATCTTAAGTTCACCCGTTTCTTTGCGTGTTTGTATGCA TTATTGCTTTAATTGTTTTCATCTATCCCAATTTATAATCAGTATTATCTTCACGAGTGATAAAAGCCTCCGTAAGTCCATTATCATTTGTTCAATGACTTCATTTCTAATCTAAACTCGAGAAACAAACTAGTCTTTGCACACACAAATTTGTGCACATTTATCTGTTTTTCACTCCATACTTGTGTCTGTACGCAACGATTATCTTCATTAAGGTCACTGTGATCTCAAATCACCTGAANAGATTCATTAAACGTTAAATAGATTTCTT                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD169491             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TTTATAACATGAAGTAACATTTTCTAGTCATAAATACTATTGAAACAATCTTAAGTTCACCCGTTTCTTTGCGTGTTTGTATGCA TTATTGCTTTAATTGTTTTCATCTATCCCAATTTATAATCAGTATTATCTTCACGAGTGATAAAAGCCTCCGTAAGTCCATTATCATTTGTTCAATGACTTCATTTCTAATCTAAACTCGAGAAACAAACTAGTCTTTGCACACACAAATTTGTGCACATTTATCTGTTTTTCACTCCATACTTGTGTCTGTACGCAACGATTATCTTCATTAAGGTCACTGTGATCTCAAATCACCTGAAGAGATTCATTAAACGTAAAATAGATTTCTTGTAAATAATAGTCTTCATCCTTTTTTTATTGATGTTCGTGCATGCGCTAAGTGAAGCCTGATGGATCGTACGAAAATTTTAACGATACATATATTGACTATTGACAGTTTTCGACTGGTTATTGGTCATTTTTGAGTTACGATTCCATAAGTCTATATGTTAGCTTTTTTTCATATTGATCGATCAGTTCTCAATGTTCTTCATATT                                                                              ]
[+] EMBL AI977388             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GAAGTAACATTTTCTAGTCATAAATACTATTGAAACAATCTTAAGTTCACCCGTTTCTTTGCGTGTTTGTATGCA TTATTGCTTTAATTGTTTTCATCTATCCCAATTTATAATCAGTATTATCTTCACGAGTGATAAAAGCCTCCGTAAGTCCATTATCATTTGTTCAATGACTTCATTTCTAATCTAAACTCGAGAAACAAACTAGTCTTTGCACACACAAATTTGTGCACATTTATCTGTTTTTCACTCCATACTTGTGTCTGTACGCAACGATTATCTTCATTAAGGTCACTGTGATCTCAAATCACCTGAAGAGATTCATTAAACGTAAAATAGATTTCT                                                                                                                                                                                                                                                                                              ]
[+] EMBL BE431281             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TTATAATCAGTATTATCTTCACGAGTGATAAAAGCCTCCGTAAGTCCATTATCATTTGTTCAATGACTTCATTTCTAATCTAAACTCGAGAAACAAACTAGTCTTTGCACACACAAATTTGTGCACATTTATCTGTTTTTCACTCCATACTTGTGTCTGTACGCAACGATTATCTTCATTAAGGTCACTGTGATCTCAAATCACCTGAAGAGATTCATTAAACGTAAAATAGATTTCT                                                                                                                                                                                                                                                                                              ]
[-] EMBL AI394903             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TGTGATCTCAAATCACGTGAGGAGATTCATTAAACGTAAAATAGATTTCTTGTAAATAATAGTCTTCATCCTTTTTTTATTGATGTTCGTGCATGCGCTAAGTGAAGCCTGATGGATCGTACGAAAATTTTAACGATACATATATTGACTATTGACAGTTTTCGACTGGTTATTGGTCATTTTTGAGTTACGATTCCATAAGTCTATATGTTAGCTTTCTTTCATATTGATCGATCAGTTCTCAATGTTCTTCATATTATTTGCTAATAACCCATGTTTATTGTTGGTTTTTCTCACTCAGCTGTATAACAATCATTCTAAAAAAAAAAAAAAAAA]


>consensus_10644#0 TGCTGAGCTCAATGCTTTAAATCCGCGTTCATTCTTTTATTGGGTTTAAGTTTATTATAT TATCGAGTTAGCTGAGTCAACAAACATCTTCAACTATACCTTTTTTCACCACTTTCCAAC AAAATCCTACACAAAACCTTATTTAGAGACCGTAGTTGACCGAACGGTAAAGCTGTTTAG AGCTCTTTCATAATAACACACAAGCTACTCAGAAGTATAGATACATTGCTTGCAAAACCA CGACTAAGAGGCGAAACATCTTGGCAGAAAGCTGGTAGAAAAATGGCCCTCAGTTTTAGA TCTTCTAAATACTTACTCATAACTCTAAACTTACTCTACCTAGTTATTGCTTTCATTCTT GTTGGCGTTGCTGCATATGCCCGGCTAAGCATTTATGTGACGAGCGTTCATATTGTTGGT GGTATAATAGCTTGTGGAGTCTTCCTCTTTGTGCTTGCTGTAGCTGGATTGTTGGGCGCT ATCAAACATAACCAGCCAATATTATTTTTCTATATAATCCTACTTTTCGGCCTCTTTCTC GTCCAATTTTCTGTAGCATGCGCTTGTCTATCACTCTCTAGTGATTATCAACAGATTTTA GTTGAGACAGCGTGGAAACAAAGCTCCAATAACTCAAAACTAACTGTCATGACGGCGTTT AAATGCTGTGGTTTCAGTAGATCCGATCTGTCTTCATCTGCCGCATTGGGATATCCCCCG TGCAAGTTAGCCAAGCTGTCTTGCTGCGATACACCTGAGGGTGAAACTGCTAAATGCTGC CAAGGTTCAGATGTGGGGAATAGCACGTTCTGCCCATGTACTACAGCTTGTTGGACTGTA ATTCAAGAACGGTTATCAACTGGTGTCCGAGTTACTGGTGCCACTAGCCTTTTCTTCAGC GTCATTGAACTTTTAGGAGTATGGACGGCTCTTCGCTATCGGCACCAACGTGATCCCTTA CTTGATCCAAACAGTGTTCTCTGAATTGTCTTCTCCATATTCATTGTCATTACTATTATT ATCATCAGTACTATTGCCATATCATATAGCTCTGTAACACATCATGGATGCCTGACAGGT TAATTTTATAACATGAAGTAACATTTTCTAGTCATAAATACTATTGAAACAATCTTAAGT TCACCCGTTTCTTTGCGTGTTTGTATGCATTATTGCTTTAATTGTTTTCATCTATCCCAA TTTATAATCAGTATTATCTTCACGAGTGATAAAAGCCTCCGTAAGTCCATTATCATTTGT TCAATGACTTCATTTCTAATCTAAACTCGAGAAACAAACTAGTCTTTGCACACACAAATT TGTGCACATTTATCTGTTTTTCACTCCATACTTGTGTCTGTACGCAACGATTATCTTCAT TAAGGTCACTGTGATCTCAAATCACCTGAAGAGATTCATTAAACGTAAAATAGATTTCTT GTAAATAATAGTCTTCATCCTTTTTTTATTGATGTTCGTGCATGCGCTAAGTGAAGCCTG ATGGATCGTACGAAAATTTTAACGATACATATATTGACTATTGACAGTTTTCGACTGGTT ATTGGTCATTTTTGAGTTACGATTCCATAAGTCTATATGTTAGCTTTTTTTCATATTGAT CGATCAGTTCTCAATGTTCTTCATATTATTTGCTAATAACCCATGTTTATTGTTGGTTTT TCTCACTCAGCTGTATAACAATCATTCTAAAAAAAAAAAAAAAAA



consensusID : consensus_10644#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 468
fasta sequence
                              [AAAAGCCTCCGTAAGTCCATTATCATATGTCCAATGACTTCATGTCTAATCTAAACTCGAGAAACAATCTAGTCTTTGCACACACAAATTTGTGCACATTGATCTGTGTTTCACTCCATACTTGTGTCTGTACGCAACGATTATCTTCATTAAGGTCACTGTGATCTCAAATCACCTGAAGAGATTCATTAAACGTAAAATAGATTTCTTGTAAATAATAGTCTTCATCCTTTTTTTATTGATGTTCGTGCATGCGCTAAGTGAAGCCTGATGGATCGTACGAAAATTTTAACGATACATATATTGACTATTGACAGTTTTCGACTGGTTATTGGTCATTTTTGAGTTACGATTCCATAAGTCTATATGTTAGCTTTTTTTCATATTGATCGATCAGTTCTCAATGTTCTTCATATTATTTGCTAATAACCCATGTTTATTGTTGGTTTTTAAAAAAAAAAAAAAAAA]

[-] EMBL AI395802             [AAAAGCCTCCGTAAGTCCATTATCATATGTCCAATGACTTCATGTCTAATCTAAACTCGAGAAACAATCTAGTCTTTGCACACACAAATTTGTGCACATTGATCTGTGTTTCACTCCATACTTGTGTCTGTACGCAACGATTATCTTCATTAAGGTCACTGTGATCTCAAATCACCTGAAGAGATTCATTAAACGTAAAATAGATTTCTTGTAAATAATAGTCTTCATCCTTTTTTTATTGATGTTCGTGCATGCGCTAAGTGAAGCCTGATGGATCGTACGAAAATTTTAACGATACATATATTGACTATTGACAGTTTTCGACTGGTTATTGGTCATTTTTGAGTTACGATTCCATAAGTCTATATGTTAGCTTTTTTTCATATTGATCGATCAGTTCTCAATGTTCTTCATATTATTTGCTAATAACCCATGTTTATTGTTGGTTTTTAAAAAAAAAAAAAAAAA]


>consensus_10644#1 AAAAGCCTCCGTAAGTCCATTATCATATGTCCAATGACTTCATGTCTAATCTAAACTCGA GAAACAATCTAGTCTTTGCACACACAAATTTGTGCACATTGATCTGTGTTTCACTCCATA CTTGTGTCTGTACGCAACGATTATCTTCATTAAGGTCACTGTGATCTCAAATCACCTGAA GAGATTCATTAAACGTAAAATAGATTTCTTGTAAATAATAGTCTTCATCCTTTTTTTATT GATGTTCGTGCATGCGCTAAGTGAAGCCTGATGGATCGTACGAAAATTTTAACGATACAT ATATTGACTATTGACAGTTTTCGACTGGTTATTGGTCATTTTTGAGTTACGATTCCATAA GTCTATATGTTAGCTTTTTTTCATATTGATCGATCAGTTCTCAATGTTCTTCATATTATT TGCTAATAACCCATGTTTATTGTTGGTTTTTAAAAAAAAAAAAAAAAA



consensusID : consensus_10644#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 234
fasta sequence
                              [AACTGCATTGATATATTCCAATTTCTGATCGGCAGTATCTTCCCGAGTGATAAAAGCCTCCTTAAGTCCATTATCATTTGTTCAATGACTTCAGTACTAATCTAAACTCGAGAACCAAACTAGTCTTTGCACACACAAATTTGTGCACATGTATCTGTTCTTCACTCCATACTTGTGCCTGTTCGCAACGATTATCTTCATTAAGGTCACTGTGATCTCAAATCACCTGAAGAG]

[-] EMBL AI395068             [AACTGCATTGATATATTCCAATTTCTGATCGGCAGTATCTTCCCGAGTGATAAAAGCCTCCTTAAGTCCATTATCATTTGTTCAATGACTTCAGTACTAATCTAAACTCGAGAACCAAACTAGTCTTTGCACACACAAATTTGTGCACATGTATCTGTTCTTCACTCCATACTTGTGCCTGTTCGCAACGATTATCTTCATTAAGGTCACTGTGATCTCAAATCACCTGAAGAG]


>consensus_10644#2 AACTGCATTGATATATTCCAATTTCTGATCGGCAGTATCTTCCCGAGTGATAAAAGCCTC CTTAAGTCCATTATCATTTGTTCAATGACTTCAGTACTAATCTAAACTCGAGAACCAAAC TAGTCTTTGCACACACAAATTTGTGCACATGTATCTGTTCTTCACTCCATACTTGTGCCT GTTCGCAACGATTATCTTCATTAAGGTCACTGTGATCTCAAATCACCTGAAGAG



consensusID : consensus_10644#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 204
fasta sequence
                              [CAAGACAATTATTATATGCCCGGCTAAGCATTTATGTGACGAGCGTTCATATTGTTGGTGGTATAATAGCTTGTGGAGTCTTCCTCTTTGTGCTTGCTGTAGCTGGATTGTTGGGCGCTATCAAACATAACCAGCCAATATTATTTTTCTATATAATCCTACTTTTCGGCCTCTTTCTCGTCCAATTTTCTGTAGCATGCGCTT]

[+] EMBL CD197130             [CAAGACAATTATTATATGCCCGGCTAAGCATTTATGTGACGAGCGTTCATATTGTTGGTGGTATAATAGCTTGTGGAGTCTTCCTCTTTGTGCTTGCTGTAGCTGGATTGTTGGGCGCTATCAAACATAACCAGCCAATATTATTTTTCTATATAATCCTACTTTTCGGCCTCTTTCTCGTCCAATTTTCTGTAGCATGCGCTT]


>consensus_10644#3 CAAGACAATTATTATATGCCCGGCTAAGCATTTATGTGACGAGCGTTCATATTGTTGGTG GTATAATAGCTTGTGGAGTCTTCCTCTTTGTGCTTGCTGTAGCTGGATTGTTGGGCGCTA TCAAACATAACCAGCCAATATTATTTTTCTATATAATCCTACTTTTCGGCCTCTTTCTCG TCCAATTTTCTGTAGCATGCGCTT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10644#0      TGCTGAGCTCAATGCTTTAAATCCGCGTTCATTCTTTTATTGGGTTTAAGTTTATTATAT 60
consensus_10644#3      ------------------------------------------------------------
consensus_10644#1      ------------------------------------------------------------
consensus_10644#2      ------------------------------------------------------------
                                                                                   

consensus_10644#0      TATCGAGTTAGCTGAGTCAACAAACATCTTCAACTATACCTTTTTTCACCACTTTCCAAC 120
consensus_10644#3      ------------------------------------------------------------
consensus_10644#1      ------------------------------------------------------------
consensus_10644#2      ------------------------------------------------------------
                                                                                   

consensus_10644#0      AAAATCCTACACAAAACCTTATTTAGAGACCGTAGTTGACCGAACGGTAAAGCTGTTTAG 180
consensus_10644#3      ------------------------------------------------------------
consensus_10644#1      ------------------------------------------------------------
consensus_10644#2      ------------------------------------------------------------
                                                                                   

consensus_10644#0      AGCTCTTTCATAATAACACACAAGCTACTCAGAAGTATAGATACATTGCTTGCAAAACCA 240
consensus_10644#3      ------------------------------------------------------------
consensus_10644#1      ------------------------------------------------------------
consensus_10644#2      ------------------------------------------------------------
                                                                                   

consensus_10644#0      CGACTAAGAGGCGAAACATCTTGGCAGAAAGCTGGTAGAAAAATGGCCCTCAGTTTTAGA 300
consensus_10644#3      ------------------------------------------------------------
consensus_10644#1      ------------------------------------------------------------
consensus_10644#2      ------------------------------------------------------------
                                                                                   

consensus_10644#0      TCTTCTAAATACTTACTCATAACTCTAAACTTACTCTACCTAGTTATTGCTTTCATTCTT 360
consensus_10644#3      -----------------------------------------------------------C 1
consensus_10644#1      ------------------------------------------------------------
consensus_10644#2      ---------------------AACTGCATTGATATATTCCAATTTCTGATCGGCAGTATC 39
                                                                                   

consensus_10644#0      GTTGGCGTTGCTGCATATGCCCGGCTAAGCAT-TTATGTGACGAGCGTTCATATTGTTGG 419
consensus_10644#3      AAGACAATTATT--ATATGCCCGGCTAAGCAT-TTATGTGACGAGCGTTCATATTGTTGG 58
consensus_10644#1      --------------AAAAGCCTCCGTAAGTCCATTATCATATGTCCAATGACTTCATGTC 46
consensus_10644#2      TTCCCGAGTGAT--AAAAGCCTCCTTAAGTCCATTATCATTTGTTCAATGACTTCAGTAC 97
                                     * * ***    ****    ****     *  *  * *  *      

consensus_10644#0      TGGTATAATAGCTTGTGGAGTCTTCCTCTTTGTGCTTGCTGTAGCTGGATTGTTGGGCGC 479
consensus_10644#3      TGGTATAATAGCTTGTGGAGTCTTCCTCTTTGTGCTTGCTGTAGCTGGATTGTTGGGCGC 118
consensus_10644#1      TAATCTAA--ACTCGAGAAACAATCTAGTCTTTGCACACACAAATTTGTGCACATTGATC 104
consensus_10644#2      TAATCTAA--ACTCGAGAACCAAACTAGTCTTTGCACACACAAATTTGTGCACATGTATC 155
                       *  * ***   ** * * *     *   * * ***   *   *  * *           *

consensus_10644#0      TATCAAACATAACCAGCCAATATTATTTTTCTATATAATCCTACTTTTCGGCCTCTTTCT 539
consensus_10644#3      TATCAAACATAACCAGCCAATATTATTTTTCTATATAATCCTACTTTTCGGCCTCTTTCT 178
consensus_10644#1      TGTGTTTCACTCCATACTTGTGTCTGTACGCAACGATTATCTTCATTAAGGTCACTGTGA 164
consensus_10644#2      TGTTCTTCACTCCATACTTGTGCCTGTTCGCAACGATTATCTTCATTAAGGTCACTGTGA 215
                       * *    **   *   *   *     *   * *       ** * **  ** * ** *  

consensus_10644#0      CGTCCAATTTTCTGTAGCATGCGCTTGTCTATCACTCTCTAGTGATTATCAACAGATTTT 599
consensus_10644#3      CGTCCAATTTTCTGTAGCATGCGCTT---------------------------------- 204
consensus_10644#1      TCTCAAATCACCTGAAGAGATTCATTAAACGTAAAATAGATTTCTTGTAAATAATAGTCT 224
consensus_10644#2      TCTCAAATCACCTGAAGAG----------------------------------------- 234
                         ** ***   *** **                                           

consensus_10644#0      AGTTGAGACAGCGTGGAAACAAAGCTCCAATAACTCAAAACTAACTGTCATGACGGCGTT 659
consensus_10644#3      ------------------------------------------------------------
consensus_10644#1      TCATCCTTTTTTTATTGATGTTCGTGCATGCGCTAAGTGAAGCCTGATGGATCGTACGAA 284
consensus_10644#2      ------------------------------------------------------------
                                                                                   

consensus_10644#0      TAAATGCTGTGGTTTCAGTAGATCCGATCTGTCTTCATCTGCCGCATTGGGATATCCCCC 719
consensus_10644#3      ------------------------------------------------------------
consensus_10644#1      AATTTTAACGATACATATATTGACTATTGACAGTTTTCGACTGGTTATTGGTCATTTTTG 344
consensus_10644#2      ------------------------------------------------------------
                                                                                   

consensus_10644#0      GTGCAAGTTAGCCAAGCTGTCTTGCTGCGATACACCTGAGGGTGAAACTGCTAAATGCTG 779
consensus_10644#3      ------------------------------------------------------------
consensus_10644#1      AGTTACGATTCCATAAGTCTATATGTTAGCTTTTTTTCATATTGATCGATCAGTTCTCAA 404
consensus_10644#2      ------------------------------------------------------------
                                                                                   

consensus_10644#0      CCAAGGTTCAGATGTGGGGAATAGCACGTTCTGCCCATGTACTACAGCTTGTTGGACTGT 839
consensus_10644#3      ------------------------------------------------------------
consensus_10644#1      TGTTCTTCATATTATTTGCTAATAACCCATGTTTATTGTTGGTTTTTAAAAAAAAAAAAA 464
consensus_10644#2      ------------------------------------------------------------
                                                                                   

consensus_10644#0      AATTCAAGAACGGTTATCAACTGGTGTCCGAGTTACTGGTGCCACTAGCCTTTTCTTCAG 899
consensus_10644#3      ------------------------------------------------------------
consensus_10644#1      AAAA-------------------------------------------------------- 468
consensus_10644#2      ------------------------------------------------------------
                                                                                   

consensus_10644#0      CGTCATTGAACTTTTAGGAGTATGGACGGCTCTTCGCTATCGGCACCAACGTGATCCCTT 959
consensus_10644#3      ------------------------------------------------------------
consensus_10644#1      ------------------------------------------------------------
consensus_10644#2      ------------------------------------------------------------
                                                                                   

consensus_10644#0      ACTTGATCCAAACAGTGTTCTCTGAATTGTCTTCTCCATATTCATTGTCATTACTATTAT 1019
consensus_10644#3      ------------------------------------------------------------
consensus_10644#1      ------------------------------------------------------------
consensus_10644#2      ------------------------------------------------------------
                                                                                   

consensus_10644#0      TATCATCAGTACTATTGCCATATCATATAGCTCTGTAACACATCATGGATGCCTGACAGG 1079
consensus_10644#3      ------------------------------------------------------------
consensus_10644#1      ------------------------------------------------------------
consensus_10644#2      ------------------------------------------------------------
                                                                                   

consensus_10644#0      TTAATTTTATAACATGAAGTAACATTTTCTAGTCATAAATACTATTGAAACAATCTTAAG 1139
consensus_10644#3      ------------------------------------------------------------
consensus_10644#1      ------------------------------------------------------------
consensus_10644#2      ------------------------------------------------------------
                                                                                   

consensus_10644#0      TTCACCCGTTTCTTTGCGTGTTTGTATGCATTATTGCTTTAATTGTTTTCATCTATCCCA 1199
consensus_10644#3      ------------------------------------------------------------
consensus_10644#1      ------------------------------------------------------------
consensus_10644#2      ------------------------------------------------------------
                                                                                   

consensus_10644#0      ATTTATAATCAGTATTATCTTCACGAGTGATAAAAGCCTCCGTAAGTCCATTATCATTTG 1259
consensus_10644#3      ------------------------------------------------------------
consensus_10644#1      ------------------------------------------------------------
consensus_10644#2      ------------------------------------------------------------
                                                                                   

consensus_10644#0      TTCAATGACTTCATTTCTAATCTAAACTCGAGAAACAAACTAGTCTTTGCACACACAAAT 1319
consensus_10644#3      ------------------------------------------------------------
consensus_10644#1      ------------------------------------------------------------
consensus_10644#2      ------------------------------------------------------------
                                                                                   

consensus_10644#0      TTGTGCACATTTATCTGTTTTTCACTCCATACTTGTGTCTGTACGCAACGATTATCTTCA 1379
consensus_10644#3      ------------------------------------------------------------
consensus_10644#1      ------------------------------------------------------------
consensus_10644#2      ------------------------------------------------------------
                                                                                   

consensus_10644#0      TTAAGGTCACTGTGATCTCAAATCACCTGAAGAGATTCATTAAACGTAAAATAGATTTCT 1439
consensus_10644#3      ------------------------------------------------------------
consensus_10644#1      ------------------------------------------------------------
consensus_10644#2      ------------------------------------------------------------
                                                                                   

consensus_10644#0      TGTAAATAATAGTCTTCATCCTTTTTTTATTGATGTTCGTGCATGCGCTAAGTGAAGCCT 1499
consensus_10644#3      ------------------------------------------------------------
consensus_10644#1      ------------------------------------------------------------
consensus_10644#2      ------------------------------------------------------------
                                                                                   

consensus_10644#0      GATGGATCGTACGAAAATTTTAACGATACATATATTGACTATTGACAGTTTTCGACTGGT 1559
consensus_10644#3      ------------------------------------------------------------
consensus_10644#1      ------------------------------------------------------------
consensus_10644#2      ------------------------------------------------------------
                                                                                   

consensus_10644#0      TATTGGTCATTTTTGAGTTACGATTCCATAAGTCTATATGTTAGCTTTTTTTCATATTGA 1619
consensus_10644#3      ------------------------------------------------------------
consensus_10644#1      ------------------------------------------------------------
consensus_10644#2      ------------------------------------------------------------
                                                                                   

consensus_10644#0      TCGATCAGTTCTCAATGTTCTTCATATTATTTGCTAATAACCCATGTTTATTGTTGGTTT 1679
consensus_10644#3      ------------------------------------------------------------
consensus_10644#1      ------------------------------------------------------------
consensus_10644#2      ------------------------------------------------------------
                                                                                   

consensus_10644#0      TTCTCACTCAGCTGTATAACAATCATTCTAAAAAAAAAAAAAAAAA 1725
consensus_10644#3      ----------------------------------------------
consensus_10644#1      ----------------------------------------------
consensus_10644#2      ----------------------------------------------
                                                                     




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)