cluster # 10645

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Schistosoma mansoni
cluster # 10645 cluster # 10645 Sequences # 19 consensus # 6

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10645#0 length = 805 sequences # 6
consensus_10645#1 length = 602 sequences # 3
consensus_10645#2 length = 570 sequences # 2

consensus_10645#3 length = 463 sequences # 2
consensus_10645#4 length = 382 sequences # 5
consensus_10645#5 length = 308 sequences # 1

consensusID : consensus_10645#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 805
fasta sequence

                              [GCAATGATAATGATAAAAGTACCACTGACAGAAATATTATTGATGATAATAAGGCGATAGGTGTGTGGTAATTTGTATAATTTTCGAATGTGCAGACAGGTATGTGCATTAGTTTTTTGTTTAGACAGTGTTACGTGTAATGTTGCGTAACTTGTTTGATTTAGTTAAGTTGAGTAAATGACTGGAATGTGGCTT------GT---AGTAGTAGTAGTAGTAGTAGTAGAAGTAGTAGTTGCGGATGGACACATTTCTTGGTTAATGAAATTAACTGTACATGATTAGGTAGGTTTGATGTGAGTGAAGTATA------TATTTGTATTTGTATTTGTATTTGTATGTATATTTATATATCTATATATATGTAGCTAATGTGTGTGGATAAATTTGATATTATTGCGAGTGTTGTTTGACATTACATTACTAATTAGTACTACTGAGGATATAGTGAGAAAAGCGTTTACACTGTAAGTGTTTTGTTTTGTTAGTGTGACGTGATAATAAATTTGTTATACGTAAGTTGGTTGATGACAGATGTGTGATCCATATGTTAGTGGTGAGTATATCTGGTTGGCACGTAGTGAGTGAATAAGAATAGTGGAATTGATGATATATAGGTAGATATATAGATATGGATATAGATATAAAAAAATTCTTTATTTGTTGTCGTTTGAAACATACAACTTTATGACGTACTTACTTAGTTACGCATGTTACCCCTTCTGAAGAAGTATGGGCCGCCCACCAGCATTCTCCATCCAACCCTGTCCTGTACAATCCTTTCCAGTTGTTTTCAAGTGTTATTTATCCTTTT]

[+] EMBL CD062177             [GCAATGATAATGATAAAAGTACCACTGACAGAAATATTATTGATGATAATAAGGCGATAGGTGTGTGGTAATTTGTATAATTTTCGAATGTGCAGACAGGTATGTGCATTATTTTTTTGTTTAAACAGTGTTACGTGTAATGTTGCGTAACTTGTTTGATTTAGTTAAGTTGAGTAAATGACTGGAATGTGGCTT      GT   AGTAGTAGTAGTAGTAGTAGTAGAAGTAGTAGTTGCGGATGGACACATTTCTTGGTTAATGAAATTAACTGTACATGATTAGGTAGGTTTGATGTGAGTGAAGTATA      TATTTGTATTTGTATTTGTATTTGTATGTATATTTATATATCTATATATATGTAGCTAATGTGTGTGGATAAATTTGATATTATTGCGAGTGTTGTTTGACATTACATTACTAATTAGTACTACTGAGGATATAGTGAGAAAAGCGTTTACACTGTAAGTGTTTTGTTTTGTTAGTGTGACGTGATAATAAATTTGTTATACGTAAGTTGGTTGATGACAGATGTGTGATCCATATGTTAGTGGTGAGTATATCTGGTTGGCACGTAGTGAG                                                                                                                                                                                                                                     ]
[+] EMBL CD096240             [       TAATGATAAAAGTACCACTGACAGAAATATTATTGATGATAATAAGGCGATAGGTGTGTGGTAATTTGTATAATTTTCGAATGTGCAGACAGGTATGTGCATTAGTTTTTTGTTTAGACAGTGTTACGTGTAATGTTGTGTAACTTGTTTGATTTAGTTAAGTTGAGTAAATGACTGGAATGTGGCTTGTAGCAGT   AGTAGTAGTAGTAGTAGTAGTAGAAGTAGTAGTTGCGGATGGACACATTTCTTGGTTAATGAAATTAACTGTACATGATTAGGTAGGTTTGATGTGAGTGAAGTATATATTTGTATTTGTATTTGTATTTGTATTTGTATGTATATTTATATATCTATATATATGTAGCTAATGTGTGTGGATAAATTTGATATTATTGCGAGCGTTGTTTGACATTACATTACTAATTAGTACTACTGAAGATATAGTGAGAAAAGCGTTTACGCTGTAAGTGTTTTGTTTTGTTAGTGTGACGTGATACTAAATTTGTTATACGTAAGTTGGTTGATGACAGATGTGTGATCCATATG                                                                                                                                                                                                                                                                        ]
[-] EMBL CD084567             [                                 ATATTATTCATGATAATAGGGCGATAGGTGTGTGGTAATTTGTATAATTTTCGAATGTGCAGACAGGTATGTGCATTAGTTTTTTGTTTAGACAGTGTTACGTGTAATGTTGCGTAACTTGTTTGATTTAGTTAAGTTGAGTAAATGACTGGAATGTGGCTT      GT   AGTAGTAGTAGTAGTAGTAGTAGAAGTAGTAGTTGCGGATGGACACATTTCTTGGTTAATGAAATTAACTGTACATGATTAGGTAGGTTTGATGTGAGTGAAGTATA      TATTTGTATTTGTATTTGTATTTGTATGTATATTTATATATCTATATATATGTAGCTAATGTGTGTGGATAAATTTGATATTATTGCGAGTGTTGTTTGACATTACATTACTAATTAGTACTACTGAGGATATAGTGAGAAAAGCGTTTACACTGTAAGTGTTTTGTTTTGTTAGTGTGACGTGATAATAAATTTGTTATACGTAAGTTGGTTGATGACAG                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD091104             [                                                                                                 AGGTATGTGCATTAGTTTTTTGTTTAGACAGTGTTACGTGTAATGTTGCGTAACTTGTTTGATTTAGTTAAGTTGAGTAAATGACTGGAATGTGGCTT      GT   AGTAGTAGTAGTAGTAGTAGTAGAAGTAGTAGTTGCGGATGGACACATTTCTTGGTTAATGAAATTAACTGTACATGATTAGGTAGGTTTGATGTGAGTGAAGTATA      TATTTGTATTTGTATTTGTATTTGTATGTATATTTATATATCTATATATATGTAGCTAATGTGTGTGGATAAATTTGATATTATTGCGAGTGTTGTTTGACATTACATTACTAATTAGTACTACTGAGGATATAGTGAGAAAAGCGTTTACACTGTAAGTGTTTTGTTTTGTTAGTGTGACGTGATAATAAATTTGTTATACGTAAGTTGGTTGATGACAGATGTGTGATCCATATGTTAGTGGTGAGTATATCTG                                                                                                                                                                                                                                                     ]
[+] EMBL CD117884             [                                                                                                         GCATTAGTTTTTTGTTTAGACAGTGTTACGTGTAATGTTGCGTAACTTGTTTGATTTAGTTAAGTTGAGTAAATGACTGGAATGTGGCTT      GTAGCAGTAGTAGTAGTAGTAGTAGTAGAAGTAGTAGTTGCGGATGGACACATTTCTTGGTTAATGAAATTAACTGTACATGATTAGGTAGGTTTGATGTGAGTGAAGTATA      TATTTGTATTTGTATTTGTATTTGTATGTATATTTATATATCTATATATATGTAGCTAATGTGTGTGGATAAATTTGATATTATTGCGAGTGTTGTTTGACATTACATTACTAATTANTACTACTGAGGATATAGTGAGAAAAGCGTTTACACTGTAAGTGTTTTGTTTTGTTAGTGTGACGTGATAATAAATTTGTTATACGTAAGTTGGTTGATGACAGATGTGTGATCCATATGTTAGTGGTGAGTATATCTGGT                                                                                                                                                                                                                                                   ]
[-] EMBL CD124891             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TGAGAAAAGCGTTTACACTGTAAGTGTTTTGTTTTGTTAGTGTGACGTGATAATAAATTTGTTATACGTAAGTTGGTTGATGACAGATGTGTGATCCATATGTTAGTGGTGAGTATATCTGGTTGGCACGTAGTGAGTGAATAAGAATAGTGGAATTGATGATATATAGGTAGATATATAGATATGGATATAGATATAAAAAAATTCTTTATTTGTTGTCGTTTGAAACATACAACTTTATGACGTACTTACTTAGTTACGCATGTTACCCCTTCTGAAGAAGTATGGGCCGCCCACCAGCATTCTCCATCCAACCCTGTCCTGTACAATCCTTTCCAGTTGTTTTCAAGTGTTATTTATCCTTTT]




>consensus_10645#0
GCAATGATAATGATAAAAGTACCACTGACAGAAATATTATTGATGATAATAAGGCGATAG
GTGTGTGGTAATTTGTATAATTTTCGAATGTGCAGACAGGTATGTGCATTAGTTTTTTGT
TTAGACAGTGTTACGTGTAATGTTGCGTAACTTGTTTGATTTAGTTAAGTTGAGTAAATG
ACTGGAATGTGGCTTGTAGTAGTAGTAGTAGTAGTAGTAGAAGTAGTAGTTGCGGATGGA
CACATTTCTTGGTTAATGAAATTAACTGTACATGATTAGGTAGGTTTGATGTGAGTGAAG
TATATATTTGTATTTGTATTTGTATTTGTATGTATATTTATATATCTATATATATGTAGC
TAATGTGTGTGGATAAATTTGATATTATTGCGAGTGTTGTTTGACATTACATTACTAATT
AGTACTACTGAGGATATAGTGAGAAAAGCGTTTACACTGTAAGTGTTTTGTTTTGTTAGT
GTGACGTGATAATAAATTTGTTATACGTAAGTTGGTTGATGACAGATGTGTGATCCATAT
GTTAGTGGTGAGTATATCTGGTTGGCACGTAGTGAGTGAATAAGAATAGTGGAATTGATG
ATATATAGGTAGATATATAGATATGGATATAGATATAAAAAAATTCTTTATTTGTTGTCG
TTTGAAACATACAACTTTATGACGTACTTACTTAGTTACGCATGTTACCCCTTCTGAAGA
AGTATGGGCCGCCCACCAGCATTCTCCATCCAACCCTGTCCTGTACAATCCTTTCCAGTT
GTTTTCAAGTGTTATTTATCCTTTT

consensusID : consensus_10645#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 602
fasta sequence

                              [CTACCAATTTTAAAGTAAACGGATCCACAAGCTTACCCCACCATATTTATAAAATCAAGAACATAATCATTAAAATTAGCAAATCTTTTTTTCATCGAAAATAATAGTACTGACCAGTTGATTTACAAAACTATAATTACAATGCCAGTAAGAAATTCACCCAAAAAAACAAAACTAGCCACTTCTCATCCTCTCGCAAGACTTTTTGCTCACTACTAGTCAATTGAGAAGTGGTAACAAAGGCCAGTGCTATGCTTATCTATCTCTCATGGCCACAATTAATAAAAAACAAGGAAATAGGTAAGGCCCCCAACCTCTACCGATTTAGACAGCTTCACTATCTGTTCATAACAAGACGCCAACTCTTCACGCAGTTGACCAACCACATTCGACTTATCTTCACACAAACTTGAACTCACTAGCTTCTCTCTCGTCATCTCCACTGCACTCATGGTCGACTGGTCTACGGTCGACGGATAGGTAAATCCTGAAGTTGACAATGTGTCAGTAGCCAACCAAGACCGACACCACCTCCTACTACACTGACAAGTATGGAAAGAGACACAGACGAAGTGGAAGACCGAGGAGGCGACCACACCGAC]

[-] EMBL CD189525             [CTACCAATTTTAAAGTAAACGGATCCACAAGCTTACCCCACCATATTTATAAAATCAAGAACATAATCATTAAAATTAGCAAATCTTTTTTTCATCGAAAATAATAGTACTGACCAGTTGATTTACAAAACTATAATTACAATGCCAGTAAGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD119875             [             AGTAAACGGATCCACAAGCTTACCCCACCATATTTATAAAATCAAGAACATAATCATTAAAATTAGCAAATCTTTTTTTCATCGAAAATAATAGTACTGACCAGTTGATTTACAAAACTATAATTACGGGGCCAGAAAGAAATTCACCCAAAAAAACAAAACTAGCCACTTCTCATCCTCTCGCAAGACTTTTTGCTCACTACTAGTCAATTGAGAAGTGGTAACAAAGGCCAGTGCTATGCTTATCTATCTCTCATGGCCACAATTAATAAAAAACAAGGAAATAGGTAAGGCCCCCAACCTCTACCGATTTAGACAGCTTCACTATCTGTTCATAACAAGACGCCAACTCTTCACGCAGTTGACCAACCACATTCGACTTATCTTCACACAAACTTGAACTCACTAGCTTCTCTCTCGTCATCTCCACTGCACTCATGGTCGACTGGTCTACGGTCG                                                                                                                                  ]
[+] EMBL CD141026             [                                                                                                                                                                                                                                                                                                                                          AGCTTCACTATCTGTTCATAACAAGACGCCAACTCTTCACGCAGTTGACCAACCACATTCGACTTATCTTCACACAAACTTGAACTCACTAGCTTCTCTCTCGTCATCTCCACTGCACTCATGGTCGACTGGTCTACGGTCGACGGATAGGTAAATCCTGAAGTTGACAATGTGTCAGTAGCCAACCAAGACCGACACCACCTCCTACTACACTGACAAGTATGGAAAGAGACACAGACGAAGTGGAAGACCGAGGAGGCGACCACACCGAC]




>consensus_10645#1
CTACCAATTTTAAAGTAAACGGATCCACAAGCTTACCCCACCATATTTATAAAATCAAGA
ACATAATCATTAAAATTAGCAAATCTTTTTTTCATCGAAAATAATAGTACTGACCAGTTG
ATTTACAAAACTATAATTACAATGCCAGTAAGAAATTCACCCAAAAAAACAAAACTAGCC
ACTTCTCATCCTCTCGCAAGACTTTTTGCTCACTACTAGTCAATTGAGAAGTGGTAACAA
AGGCCAGTGCTATGCTTATCTATCTCTCATGGCCACAATTAATAAAAAACAAGGAAATAG
GTAAGGCCCCCAACCTCTACCGATTTAGACAGCTTCACTATCTGTTCATAACAAGACGCC
AACTCTTCACGCAGTTGACCAACCACATTCGACTTATCTTCACACAAACTTGAACTCACT
AGCTTCTCTCTCGTCATCTCCACTGCACTCATGGTCGACTGGTCTACGGTCGACGGATAG
GTAAATCCTGAAGTTGACAATGTGTCAGTAGCCAACCAAGACCGACACCACCTCCTACTA
CACTGACAAGTATGGAAAGAGACACAGACGAAGTGGAAGACCGAGGAGGCGACCACACCG
AC

consensusID : consensus_10645#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 570
fasta sequence

                              [TTGTCAATGTAGTAGATGTAGAGATCGTCGTCGTCCGGTGTTGTACTGGAAGGCGATGCTGTGTCCGGTGTCGCTCCAGGTTCTGGAGATGTCGGTGTGGTTCGCCTCCTCGGTCTTCCACTTCGTCTGTGTCTCTTTCCATACTTGTCAGTGTAGTAGGAGGTGGTGTCGGTCTCCTCGATTGTCATGCTGGTCGACTCGGTGCGTTTCACTGAACCGGTGACTGGTGTCGAGCTGTTTGGTGTGTCTGATGGTGTTGTACGAGGTCGAGGTCGTCTTCTCCTCTTACCAAACTTGTCAATGTAGTAGATGTAGAGATCGTCGTCGTCCGGTGTTGTACTGGAAGGCGATGCTGTGTCTGGTGTCGCTCCAGGTTCTGGAGATGTCGGTGTGGTTCGCCTCCTCGATCTTCCACTTCTTCTGTGTCTCTTTCCATACTTGCCAGTGTACCAGGATGTGGTGACTGTCTGGTTCGCCTCCTCGGTCTTCCACTTCGTCTGTGTCTCTTTCCATACTTGTCAGTGTAGTAGGAAGTGGTGTCGGTCTCCTCGGTTGTCATGCTGGTCGACT]

[+] EMBL CD145939             [TTGTCAATGTAGTAGATGTAGAGATCGTCGTCGTCCGGTGTTGTACTGGAAGGCGATGCTGTGTCCGGTGTCGCTCCAGGTTCTGGAGATGTCGGTGTGGTTCGCCTCCTCGGTCTTCCACTTCGTCTGTGTCTCTTTCCATACTTGTCAGTGTAGTAGGAGGTGGTGTCGGTCTCCTCGATTGTCATGCTGGTCGACTCGGTGCGTTTCACTGAACCGGTGACTGGTGTCGAGCTGTTTGGTGTGTCTGATGGTGTTGTACGAGGTCGAGGTCGTCTTCTCCTCTTACCAAACTTGTCAATGTAGTAGATGTAGAGATCGTCGTCGTCCGGTGTTGTACTGGAAGGCGATGCTGTGTCTGGTGTCGCTCCAGGTTCTGGAGATGTCGGTGTGGTTCGCCTCCTCGATCTTCCACTTCTTCTGTGTCTCTTTCCATACTTGCCAGTGTACCAGGATGTGGTGACTG                                                                                                        ]
[+] EMBL CD144264             [                                                                                                                     CCACTTCGTCTGTGTCTCTTTCCATACTTGTCAGTGTAGTAGGAGGTGGTGTCGGTCTCCTCGGTTGTCATGCTGGTCGACTCGGTGCGTTTCACTGAACCGGTGACTGGTGTCGAGCTGGTTGGTGTGTCTGATGGTGTTGTACGAGGTCGAGGTCGTCTTCTCCTCTTACCAAACTTGTCAATGTAGTAGATGTAGAGATCGTCGTCGTCCGGTGTTGTACTGGAAGGCGATGCTGTGTCTGGTGTCGCTCCAGGTTCTGGTGATGTCGGTGTGGTTCGCCTCCTCGGTCTTCCACTTCGTCTGTGTCTCTTTCCATACTTGTCAGTGTAGTAGGAGGTGGTGTCGGTCTGGTTCGCCTCCTCGGTCTTCCACTTCGTCTGTGTCTCTTTCCATACTTGTCAGTGTAGTAGGAAGTGGTGTCGGTCTCCTCGGTTGTCATGCTGGTCGACT]




>consensus_10645#2
TTGTCAATGTAGTAGATGTAGAGATCGTCGTCGTCCGGTGTTGTACTGGAAGGCGATGCT
GTGTCCGGTGTCGCTCCAGGTTCTGGAGATGTCGGTGTGGTTCGCCTCCTCGGTCTTCCA
CTTCGTCTGTGTCTCTTTCCATACTTGTCAGTGTAGTAGGAGGTGGTGTCGGTCTCCTCG
ATTGTCATGCTGGTCGACTCGGTGCGTTTCACTGAACCGGTGACTGGTGTCGAGCTGTTT
GGTGTGTCTGATGGTGTTGTACGAGGTCGAGGTCGTCTTCTCCTCTTACCAAACTTGTCA
ATGTAGTAGATGTAGAGATCGTCGTCGTCCGGTGTTGTACTGGAAGGCGATGCTGTGTCT
GGTGTCGCTCCAGGTTCTGGAGATGTCGGTGTGGTTCGCCTCCTCGATCTTCCACTTCTT
CTGTGTCTCTTTCCATACTTGCCAGTGTACCAGGATGTGGTGACTGTCTGGTTCGCCTCC
TCGGTCTTCCACTTCGTCTGTGTCTCTTTCCATACTTGTCAGTGTAGTAGGAAGTGGTGT
CGGTCTCCTCGGTTGTCATGCTGGTCGACT

consensusID : consensus_10645#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 463
fasta sequence

                              [GACAAAAACGACAAAACCAGCGAAAATTAACACACAAAAGAGAGGATCAAAGAAAGTGGGAGAAAACCAACGAAACGAAAAAAACTTAACAACACAAAAAACAAAATCAGTATATCACATCTAAAAACAGCAAAACTGAAATGAACCAAACAAAAGACCACTTGAATGAAGGAACAACAAAAACGCTTAAGAAAAGAAAAAGCGGACCAAATAAAAATAAAATTAGGGTCAAGCACAGCATAGAGCAGCAAGATTGCGTCACCGTACATCAGAAAAGAAGAGGAACTACAACGGAAAGAAGGAATGACGTAAACGACGAATCCAGTTGGGATGTAGAAACGATCACGGTTCCGATGCCGTCATTGACTGAGGACAGACTGCAGACGGGTTCTGTGTCGGATGCTGTACAGTCAGTGAGCCCACATGAGGACACAGATTCACACGGAAACAATTCTCTCAGTTC]

[+] EMBL CD133117             [GACAAAAACGACAAAACCAGCGAAAATTAACACACAAAAGAGAGGATCAAAGAAAGTGGGAGAAAACCAACGAAACGAAAAAAACTTAACAACACAAAAAACAAAATCAGTATATCACATCTAAAAACAGCAAAACTGAAATGAACCAAACAAAAGACCACTTGAATGAAGGAACAACAAAAACGCTTAAGAAAAGAAAAAGCGGACCAAATAAAAATAAAATTAGGGTCAAGCACAGCATAGAGCAGCAAGATTGCGTCACCGTACATCAGAAAAGAAGAGGAACTACAACGGAAAGAAGGAATGACGTAAACGACGAATCCAGTTGGGATGTAGAAACGATCACGGTTC                                                                                                                ]
[+] EMBL CD146688             [                                                                                                                                  CAAAACTGAAATGAACCAAACAAAAGACCACTTGAATGAAGGAACAACAAAAACGCTTAAGAAAAGAAAAAGCGGAAAAAATAAAAATAAAATTAGGGTCAAGCACAGCATAGAGCAGCAAGATTGCGTCACCGTACATCAGAAAAGAAGAGGAACTACAACGGAAAGAAGGAATGACGTAAACGACGAAACCAGTTGGGATGTAGAAACGATCGCGGTTCCGATGCCGTCATTGACTGAGGACAGACTGCAGACGGGTTCTGTGTCGGATGCTGTACAGTCAGTGAGCCCACATGAGGACACAGATTCACACGGAAACAATTCTCTCAGTTC]




>consensus_10645#3
GACAAAAACGACAAAACCAGCGAAAATTAACACACAAAAGAGAGGATCAAAGAAAGTGGG
AGAAAACCAACGAAACGAAAAAAACTTAACAACACAAAAAACAAAATCAGTATATCACAT
CTAAAAACAGCAAAACTGAAATGAACCAAACAAAAGACCACTTGAATGAAGGAACAACAA
AAACGCTTAAGAAAAGAAAAAGCGGACCAAATAAAAATAAAATTAGGGTCAAGCACAGCA
TAGAGCAGCAAGATTGCGTCACCGTACATCAGAAAAGAAGAGGAACTACAACGGAAAGAA
GGAATGACGTAAACGACGAATCCAGTTGGGATGTAGAAACGATCACGGTTCCGATGCCGT
CATTGACTGAGGACAGACTGCAGACGGGTTCTGTGTCGGATGCTGTACAGTCAGTGAGCC
CACATGAGGACACAGATTCACACGGAAACAATTCTCTCAGTTC

consensusID : consensus_10645#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 382
fasta sequence

                              [ATCTCTACATCTACTACATTGACAAGTCTGGTAAGAGGAGAAGACGACCTCGACCTCGTGCAACACCATCAGACACACCAACCAGCTCGACACCAGTCACCGGTTCAGTGAAACAACC-TGGAGCGACACCAGACACAGCATCGCCTTCCAGTACAACACCGGACGACGACGATCTCTACATCTACTACATTGACAAGTCTGGTAAGAGGAGAAGACGACCTCGACCTCGTGCAACACCATCAGACACACCAACCAGCTCGACACCAGTCACCGGTTCAGTGAAACAACCTGGAGCGACACCAGACACAGCATCGCCTTCCAGTACAACACCGGACGACGACGATCTCTACATCTACTACATTGACAAGTCTGGTAAGAGGAG]

[+] EMBL CD085572             [ATCTCTACATCTACTACATTGACAAGTCTGGTAAGAGGAGAAGACGACCTCGACCTCGTACAACACCATCAGACACACCAACCAGCTCAACACCAGTCACCAGTTCAGTGAAACAACC TGGAGCGACACCAGACACAGCATCGCCTTCCAGTACAACACCGGACGACGACGATCTCTACATCTACTACATTGACAAGTCTGGTAAGAGGAGAAGACGACCTCGACCTCGTGCAACACCATCAGACACACCAACCAGCTCGACACCAGTCACCGGTTCAGTGAAACAACCTGGAGCGACACCAGACACAGCATCGCCTTCCAGTACAACACCGGACGACGACG                                        ]
[-] EMBL CD136128             [                        AGTCTGGTAAGAGGAGAAGACGACCTCGACCTTGTGCAACACCATCAGACACACCAACCAGCTCGACACCAGTCACCGGTTCAGTGAAACAACC TGGAGCGACACCAGACACAGCATCGCCCTCCAGTACAACACCGGACGACGACGATCTCTACATCTACTACATTGACAAGTCTGGTAAGAGGAG                                                                                                                                                                           ]
[+] EMBL CD132425             [                                        AAGACGACCTCGACCTCGTGCAACACCATCAGACACACCAACCAGCTCGACACCAGTCACCGGTTCAGTGAAACAACC TGGAGCGACACCAGACACAGCATCGCCTTCCAGTACAACACCGGACGAGGACGATCTCTACATCTACTACATTGACAAGTCTGGAAAGAGGAGAAGAC                                                                                                                                                                      ]
[+] EMBL CD136160             [                                                                                                   CCGGTTCAGTGAAACAACC TGGAGCGACACCAGACACAGCATCGCCTTCCAGTACAACACCGGACGACGACGATCTCTACATCTACTACATTGACAAGTCTGGTAAGAGGAGAAGACGACCTCGACCTCGTGCAACACCATCAGACACACCAACCAGCTCGACACCAGTCACCGGTTCAGTGAAACAACCTG                                                                                           ]
[-] EMBL CD136141             [                                                                                                    CGGTTCAGTGAAACAACCTTGGAGCGACACCAGACACAGCATCGCCTTCCAGTACAACACCGGACGACGACGATCTCTACATCTACTACATTGACAAGTCTGGTAAGAGGAGAAGACGACCTCGACCTCGTGCAACACCATCAGACACACCAACCAGCTCGACACCAGTCACCGGTTCAGTGAAACAACCTGGAGCGACACCAGACACAGCATCGCCCTCCAGTACAACACCGGACGACGACGATCTCTACATCTACTACATTGACAAGTCTGGTAAGAGGAG]




>consensus_10645#4
ATCTCTACATCTACTACATTGACAAGTCTGGTAAGAGGAGAAGACGACCTCGACCTCGTG
CAACACCATCAGACACACCAACCAGCTCGACACCAGTCACCGGTTCAGTGAAACAACCTG
GAGCGACACCAGACACAGCATCGCCTTCCAGTACAACACCGGACGACGACGATCTCTACA
TCTACTACATTGACAAGTCTGGTAAGAGGAGAAGACGACCTCGACCTCGTGCAACACCAT
CAGACACACCAACCAGCTCGACACCAGTCACCGGTTCAGTGAAACAACCTGGAGCGACAC
CAGACACAGCATCGCCTTCCAGTACAACACCGGACGACGACGATCTCTACATCTACTACA
TTGACAAGTCTGGTAAGAGGAG

consensusID : consensus_10645#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 308
fasta sequence

                              [TTGGCTGGCATTGGGCGGCGGCAGTGATGGGTGAGGGCTAGTGAGTGTGTGTGTGTGTGTGTGTGTAGCTCTTTCCACCGGTTGATGTTGGTGCTGCATCTTCAAGAACAACGCGCCTCAATGTTTCATGCTGTGATCTGCTAATGCACCTTGTTACTGGGTAGAACTAATCGACTCCTAAAATTTGTGACTAGTGGTATCATGTGTGGTGGTAGTGTTTTAATGTGTTTTGTCACCTTTGCTTAATAGTTGATAATTTTGTATAATGAGCAAAATTAAACGGTGCCGACGCCTGTTGACAGCCATTT]

[+] EMBL CD085591             [TTGGCTGGCATTGGGCGGCGGCAGTGATGGGTGAGGGCTAGTGAGTGTGTGTGTGTGTGTGTGTGTAGCTCTTTCCACCGGTTGATGTTGGTGCTGCATCTTCAAGAACAACGCGCCTCAATGTTTCATGCTGTGATCTGCTAATGCACCTTGTTACTGGGTAGAACTAATCGACTCCTAAAATTTGTGACTAGTGGTATCATGTGTGGTGGTAGTGTTTTAATGTGTTTTGTCACCTTTGCTTAATAGTTGATAATTTTGTATAATGAGCAAAATTAAACGGTGCCGACGCCTGTTGACAGCCATTT]




>consensus_10645#5
TTGGCTGGCATTGGGCGGCGGCAGTGATGGGTGAGGGCTAGTGAGTGTGTGTGTGTGTGT
GTGTGTAGCTCTTTCCACCGGTTGATGTTGGTGCTGCATCTTCAAGAACAACGCGCCTCA
ATGTTTCATGCTGTGATCTGCTAATGCACCTTGTTACTGGGTAGAACTAATCGACTCCTA
AAATTTGTGACTAGTGGTATCATGTGTGGTGGTAGTGTTTTAATGTGTTTTGTCACCTTT
GCTTAATAGTTGATAATTTTGTATAATGAGCAAAATTAAACGGTGCCGACGCCTGTTGAC
AGCCATTT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10645#1      ---------------------------------------------------CTACCAATT 9
consensus_10645#3      ------------------------------------------------------------
consensus_10645#4      ------------------------------------------------------------
consensus_10645#2      -----------------------------------------------------------T 1
consensus_10645#5      ------------------------------------------------------------
consensus_10645#0      GCAATGATAATGATAAAAGTACCACTGACAGAAATATTATTGATGATAATAAGGCGATAG 60
                                                                                   

consensus_10645#1      TTAAAGTAAACGGATCCACAAGCTTACCCCACCATATTTATAAAATCAAGAACATAATCA 69
consensus_10645#3      --------------------------------------------------GACAAAAACG 10
consensus_10645#4      ------------------------------------------------------------
consensus_10645#2      TGTCAATGTAGTAGATGTAGAGATCGTCGTCGTCCGGTGTTGTACTGGAAGGCGATGCTG 61
consensus_10645#5      ------------------------------------------------------------
consensus_10645#0      GTGTGTGGTAATTTGTATAATTTTCGAATGTGCAGACAGGTATGTGCATTAGTTTTTTGT 120
                                                                                   

consensus_10645#1      TTAAAATTAGCAAATCTTTTTTTCATCGAAAATAATAGTACTGACCAGTTGATTTACAAA 129
consensus_10645#3      ACAAAACCAGCGAAAATTAA---CACACAAAAGAGAGGATCAAAGAAAGTGG--GAGAAA 65
consensus_10645#4      ---------------------------------------------------------ATC 3
consensus_10645#2      TGTCCGGTGTCGCTCCAGGTTCTGGAGATGTCGGTGTGGTTCGCCTCCTCGG--TCTTCC 119
consensus_10645#5      ------------------------------------------------------------
consensus_10645#0      TTAGACAGTGTTACGTGTAATGTTGCGTAACTTGTTTGATTTAGTTAAGTTGAGTAAATG 180
                                                                                   

consensus_10645#1      ACTATAATTACAATGCCAGTAAGAAATT-CACCCAAAAAAACAAAACTA--GCC--ACTT 184
consensus_10645#3      ACCA-----ACGAAACGAAAAAAACTTAACAACACAAAAAACAAAATCA--GT---ATAT 115
consensus_10645#4      TCTACATCTACTACATTGACAAGTCTGGTAAGAGGAGAAGACGACCTCG--ACCTCGTGC 61
consensus_10645#2      ACTTCGTCTGTGTCTCTTTCCATACTTGTCAGTGTAGTAGGAGGTGGTG--TCG----GT 173
consensus_10645#5      ----------------------------------------------TTG--GC------T 6
consensus_10645#0      ACTGGAATGTGGCTTGTAGTAGTAGTAGTAGTAGTAGTAGAAGTAGTAGTTGCGGATGGA 240
                                                                                   

consensus_10645#1      CTCATCCTCTCGC-AAGACTTTTTGCTCACTACTAGTCAATTGAGAAGTGGTAACAA--A 241
consensus_10645#3      CACATCTAAAAAC-AGCAAAACTGAAATGA-ACCAAACAAAAGACCACTTGAATGAA--G 171
consensus_10645#4      AACACCATCAGAC-ACACCAACCAGCTCGACACCAGTCACCGGTTCAGTGAAACAACCTG 120
consensus_10645#2      CTCCTCGATTGTC-ATGCTGGTCGACTCGGTGCGTTTCACTGAACCGGTGAC-TGGTGTC 231
consensus_10645#5      GGCATTGGGCGGC-GGCAGTGATGGGTGAGGGCTAGTGAGTGTGTGTGTGTGTGTGT--- 62
consensus_10645#0      CACATTTCTTGGTTAATGAAATTAACTGTACATGATTAGGTAGGTTTG-ATGTGAGTGAA 299
                         *                                                         

consensus_10645#1      GGCCAGTGCTA--TGCTTATCTATCTCTCATGGCCACAATTAATAA--AAA-ACAAGGAA 296
consensus_10645#3      GAACAACAAAAA-CGCTTAAGAA------AAGAAAAAGCGGACCAA--ATA-AAAATAAA 221
consensus_10645#4      GAGCGACACCAGACACAGCATCGCCTTCCAGTACAACACCGGACGACGACG-ATCTCTAC 179
consensus_10645#2      GAGCTGTTTGGTGTGTCTGATGGTGTT---GTACGA----GGTCGAGGTCG-TCTTCTCC 283
consensus_10645#5      GTGTAGCTCTTTCCACCGGTTGATGTT--GGTGCTGCA-TCTTCAAGAACA-ACGCGCCT 118
consensus_10645#0      GTATATATTTGTATTTGTATTTGTATTTGTATGTATATTTATATATCTATATATATGTAG 359
                       *                                                           

consensus_10645#1      ATAGGTAAGGCCCCCAACCTCTACCGATTTAGACAGCTTCACTATCTG-TTCATAACAAG 355
consensus_10645#3      ATTAGGGTCAAGCACAGCATAGAGCAGCA-AGATTGCGTCACCGTACA-TCAGAAAAGAA 279
consensus_10645#4      ATCTACTACATTGACAAGTCTGGTAAGAGGAGAAGACGACCTCGACCT-CGTGCAACACC 238
consensus_10645#2      TCTTACCAAACTTGTCAATGTAGTAGATGTAGAGATCGTCGTCGTCCGGTGTTGTACTGG 343
consensus_10645#5      CAATGTTTCATGCTGTGATCTGCTAA---TGCACCTTGTTACTGGGTAGAACTAATCGAC 175
consensus_10645#0      CTAATGTGTGTGGATAAATTTGATATTATTGCG-AGTGTTGTTTGACATTACATTACTAA 418
                                                                                   

consensus_10645#1      ACGCCAACTCTTCACGCAGTTGACCAACCACATTCGAC----TTATCTTCACACA-AACT 410
consensus_10645#3      GAGGAACTACAACGGAAAGAAGGAATGACGTAAACGAC----GAATCCAGTTGGG-ATGT 334
consensus_10645#4      AT-CAGACACACCAACCAGCTCGACACCAGTCACCGGT----TCAGTGAAAC----AACC 289
consensus_10645#2      AAGGCGATGCTGTGTCTGGTGTCGCTCCAGGTTCTGGAGATGTCGGTGTGGTTCGCCTCC 403
consensus_10645#5      TCCTAAAATTTGTGACTAGTGGTATCATGTGTGGTGGT---AGTGTTTTAATGTG-TTTT 231
consensus_10645#0      TTAGTACTACTGAGGATA-TAGTGAGAAAAGCGTTTAC---ACTGTAAGTGTTTTGTTTT 474
                                                                                   

consensus_10645#1      TGAACTCACTA--GCTTCTCTCTCGTCATCTC-------CACTGCACTCATGGTCGACTG 461
consensus_10645#3      AGAAACGATCACGGTTCCGATGCCGTCATTGA-------CTGAGGACAGACTGCAGACGG 387
consensus_10645#4      TGGAGCGACACCAGACACAGCATCGCCTTCCAG------TACAACACCGGACGACGACGA 343
consensus_10645#2      TCGATCTTCCACTTCTTCTGTGTCTCTTTCCATACTTGCCAGTGTACCAGGATGTGGTGA 463
consensus_10645#5      GTCACCTTTGCTTAATAGTTGATAATTTTGTA-------TAATG-AGCAAAATTAAACGG 283
consensus_10645#0      GTTAGTGTGACGTGATAATAAATT-TGTTATACGTAAGTTGGTTGATGACAGATGTGTGA 533
                          *                        *                *              

consensus_10645#1      GTCTACGGTCGACGG-ATAGGTAAATCCTGAAGTTGACAATGTGTCAGTAGCCAACCAAG 520
consensus_10645#3      GTTCTGTGTCGGATG-CTGTACAG-TCAGTGAGCCCACATGAGGACA----CAGATTCAC 441
consensus_10645#4      TCTCTACATCTACTACATTGACAAGTCTGGTAAGAGGAG--------------------- 382
consensus_10645#2      CTGTCTGGTTCGCCTCCTCGGTCTTCCACTTCGTCTGTGTCTCTTTCCATACTTGTCAGT 523
consensus_10645#5      TGCCGACGCCTGTTG-ACAGCCATTT---------------------------------- 308
consensus_10645#0      TCCATATGTTAGTGGTGAGTATATCTGGTTGGCACGTAGTGAGTGAATAAGAATAGTGGA 593
                                                                                   

consensus_10645#1      ACCGACACCAC-CTCCTACTACACTGACAAGTATGGAAAGAGACACAGACGAAGTGGAAG 579
consensus_10645#3      ACGGAAACAATTCTCTCAGTTC-------------------------------------- 463
consensus_10645#4      ------------------------------------------------------------
consensus_10645#2      GTAGTAGGAAGTGGTGTCGGTCTCCTCGGTTGTCATGCTGGTCGACT------------- 570
consensus_10645#5      ------------------------------------------------------------
consensus_10645#0      ATTGATGATATATAGGTAGATATATAGATATGGATATAGATATAAAAAAATTCTTTATTT 653
                                                                                   

consensus_10645#1      ACCGAGGAGGCGACCACACCGAC------------------------------------- 602
consensus_10645#3      ------------------------------------------------------------
consensus_10645#4      ------------------------------------------------------------
consensus_10645#2      ------------------------------------------------------------
consensus_10645#5      ------------------------------------------------------------
consensus_10645#0      GTTGTCGTTTGAAACATACAACTTTATGACGTACTTACTTAGTTACGCATGTTACCCCTT 713
                                                                                   

consensus_10645#1      ------------------------------------------------------------
consensus_10645#3      ------------------------------------------------------------
consensus_10645#4      ------------------------------------------------------------
consensus_10645#2      ------------------------------------------------------------
consensus_10645#5      ------------------------------------------------------------
consensus_10645#0      CTGAAGAAGTATGGGCCGCCCACCAGCATTCTCCATCCAACCCTGTCCTGTACAATCCTT 773
                                                                                   

consensus_10645#1      --------------------------------
consensus_10645#3      --------------------------------
consensus_10645#4      --------------------------------
consensus_10645#2      --------------------------------
consensus_10645#5      --------------------------------
consensus_10645#0      TCCAGTTGTTTTCAAGTGTTATTTATCCTTTT 805