cluster # 10649

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Schistosoma mansoni
cluster # 10649 cluster # 10649 Sequences # 19 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10649#0 length = 1447 sequences # 18

consensus_10649#1 length = 228 sequences # 1

consensusID : consensus_10649#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 18
consensus length = 1447
fasta sequence

                              [AACGCAATCGCTTGATACGTCGGACATGCATGAGATATATTATGGCAAATCTAATAATTACAACTGCACATCTTAATGTCGTAGTCAAGAAGCGGTTTCCAACTTTTGAGCTTTTTGTTGCTTCAGGCATACTTACCGAAGATGAGGCAAGAATTATTAGGAGTGTACAATCTGTTCATATGCAACCG-TTTGTTCCTGTTGTATGGGCAACTTCTCTTATCACCTTAGCTAGAAAAGAAGGACTAATCAAAAACCCTCATGCATACGTTCTTTTGGTAAATGAACTTAACACTTTCCGTCAAAAAATATTATATGTAATGATGATGGATGATGTTTGTATTCCATTGGTTTATACACA-GGTTGTCACACTATCTGTATACTCCTATTTTGTCGCATCTCTTATAAGTAGTCAATTCATCATCAGCAGTTCACCTTTTGCAGGCATAGCACGTTCGCATGATGTTTTCTTCCCGTTTTTCACATTTCTGGAACTTTTTGTTTATGTGGGATGGCTAAAAGTTGCTGAAACACTTGTGAATCCAATGGGAGAAGATGATGAAGATATTGATATTAATGAGATAATTGACTTTAATTGGAGAATTTCGTGGTGTGTGGTAGATGGAGTGAGAACAAGTGCACCTGCCATTGTACGAGACGCCCATTGGAGACAATCCGTTGTAGAACTTCCTCATACGGAACGGTCAAGACGTCTAACTGTCGGATCAAGGAAAGGGTCTATTTATGATATGAATGTTCCTGTTGGTCCAGAACTGCGCGATCTCATGGCAGCTTTATCCACAGCACGACAGATGCAGATGTCAAGTGCAAACTCACCAGCTCCTTCAAAGTCTATCTGTCATAATGAAAGTGACAGTCCACGCGGGGAATCAGATGACCGTAGACAATCGTTTCCTTACACCACAACTACTAATGTTGTTCATGAACCCATAAAAGAAGAGGATGAAGAACTAGAAGATGAACAGTCTGGAAAAGATCTGGAGG-AAAATAAAGTAAATGATGAAATTAACGATTTATCAGGTAGTCATACGCATGATCACTGTTCAAGGCTCTAGTTATTATCTGTTCAAGGGGTATTATTATTTTGTTTATTTGTCGGTCTAGTAGATGGCAAAGTGGTGATGAACACACTTTAAAATGTTTGCGGAAAAAAAGATGCCTAATGTCTTTGTTATCATTACTTATTTTACTTCAACTACTTTGATGACAACTGCCCATGCCCAACTTAAATTTATTTTTCATTAACTTTTTACCCTTAAGAGTTTTTTCCAGCTCCTTCCTTAGTTAAAATCATGATGATTTATTTTGACTGAGATTATATTTTAAAAATCTATCTGTTCTCTACTTGTCTTTCATGAATTGTATTTTGCTTAACAAACTCTATTAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACCGTATGG]

[-] EMBL CD068776             [AACGCAATCGCTTGATACGTCGGACATGCATGAGATATATTATGGCAAATCTAATAATTACAACTGCACATCTTAATGTCGTAGTCAAGAAGCGGTTTCCAACTTTTGAGCTTTTTGTTGCTTCAGGCATACTTACCGAAGATGAGGCAAGAATTATTAGGAGTGTACAATCTGTTCATATGCAACCG TTTGTTCCTGTTGTATGGGCAACTTCTCTTATCACCTTAGCTAGAAAAGAAGGACTAATCAAAAACCCTCATGCATACGTTCTTTTGGTAAATGAACTTAACACTTTCCGTCAAAAAATATTATATGTAATGATGATGGATGATGTTTGTATTCCATTGGTTTATACACA GGTTGTCACACTATCTGTATACTCCTATTTTGTCGCATCTCTTATAAGTAGTCAATTCATCATCAGCAGTTCACCTTTTGCAGGCATAGCACGTTCGCATGATGTTTTCTTCCCGTTTTTCACATTTCTGGAACTTTTTGTTTATGTGGGATGGCTAAAAGTTGCTGAAACACTTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD079946             [                                                                                           GCGGTTTCCAACTTTTGAGCTTTTTGTTGCTTCAGGCATACTTACCGAAGATGAGGCAAGAATTATTAGGAGTGTACAATCTGTTCATATGCAACCG TTTGTTCCTGTTGTATGGGCAACTTCTCTTATCACCTTAGCTAGAAAAGAAGGACTAATCAAAAACCCTCATGCATACGTTCTTTTGGTAAATGAACTTAACACTTTCCGTCAAAAAATATTATATGTAATGATGATGGATGATGTTTGTATTCCATTGGTTTATACACA GGTTGTCACACTATCTGTATACTCCTATTTTGTCGCATCTCTTATAAGTAGTCAATTCATCATCAGCAGTTCACCTTTTGCAGGCATAGCACGTTCGCATGATGTTTTCTTCCCGTTTTTCACATTTCTGGAACTTTTTGTTTATGTGGGATGGCTAAAAGTTGCTGAAACACTTGTGAATCCAATGGGAGAAGATGATGAAGATATTGATATTAATGAGATAATTGACTTTAATTGGAGAATTTCGTGGTGTGTGGTAGATGGAGTGAGAACAAGTGCACCTGCCATTGTACGAGACGCCCATTGGAGACAATCCGTTGTAGAACTTCCTCATACGGAACGGTCAAGACGTCTAACTGTCGGATCAAGGAAAGGGTCTATTTATGATATGAATGTTCCTGTTGGTCCAGAACTGCGCGATCTCATGGCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CD068297             [                                                                                                                                 TACTTACCGAAGATGAGACAAGAATTATTAGGAGTGTACAATCTGTTCATATGCAACCGTTTTGTTCCTGTTGTATGGGCAACTTCTCTTATCACCTTAGCTAGAAAAGAAGGACTAATCATAAACCCTCATGCATACGTTCTTTTGGTAAATGAACTTAACACTTTCCGTCAAAAAATATTATATGTAATGATGATGGATGATGTTTGTATTCCATTGGTTTATACACA GGTTGTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD168966             [                                                                                                                                                                                                                                                        CAAAAACCCTCATGCATACGTTCTTTTGGTAAATGAACTTAACACTTTCCGTCAAAAAATATTATATGTAATGATGATGGATGATGTTTATATTCCATTGGTTTATACACA GGTTGTCACACTATCTGTATACTCCTATTTTGTCGCATCTCTTATAAGTAGTCAATTCATCATCAGCAGTTCACCTTTTGCAGGCATAGCACGTTCGCATGATGTTTTCTTCCCGTTTTTCACATTTCTGGAACTTTTTGTTTATGTGGGATGGCTAAAAGTTGCTGAAACACTTGTGAATCCAATGGGAGAAGATGATGAAGATATTGATATTAATGAGATAATTGACCTTAATTGGAGAATTTCGTGGTGTGTGGTAGATGGAGTGAGAACAAGTGCACCTGCCATTGTACGAGACGCCCATTGGAGACAATCCGTTGTAGAACTTCCTCATACGGAACGGTCAAGACGTCTAACTGTCGGATCAAGGAAAGGGTCTATTTATGATATGAATGTTCCTGTTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD080358             [                                                                                                                                                                                                                                                                                                                                        ATGATGTTTGTATTCCATTGGTTTATACACANGGTTGTCACACTATCTGTATACTCCTATTTTGTCGCATCTCTTATAAGTAGTCAATTCATCATCAGCAGTTCACCTTTTGCAGGCATAGCACGTTCGCATGATGTTTTCTTCCCGTTTTTCACATTTCTGGAACTTTTTGTTTATGTGGGATGGCTAAAAGTTGCTGAAACACTTGTGAATCCAATGGGAGAAGATGATGAAGATATTGATATTAATGAGATAATTGACTTTAATTGGAGAATTTCGTGGTGTGTGGTAGATGGAGTGAGAACAAGTGCACCTGCCATTGTACGAGACGCCCATTGGAGACAATCCGTTGTAGAACTTCCTCATACGGAACGGTCAAGACGTCTAACTGTCGGATCAAGGAAAGGGTCTATTTATGATATGAATGTTCCTGTTGGTCCAGAACTGCGCGATCTCATGGCAGCTTTATCCACAGCACGACAGATGCAGATGTCAAGTGCAAACTCACCAGCTCCTTCAAAGTCTATCTGTCATAATGAAAGTGACAGTCCACGCGGGGAATCAGATGACCGTAGACAATCGTTTCCTTACACCACAACTACTAATGTTGTTCATGAACCCATAAAAGAAGAGGATGAAGAACTAGAAGATGAACAGTCTGGANAAGATCTGGAGGAAAAATAAAGT AATGATGAAATTAACGATTTATCAn                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD074455             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GGGTCTATTTATGATATGAATGTTCCTGTTGGTCCAGAACTGCGCGATCTCATGGCAGCTTTATCCACAGCACGACAGATGCAGATGTCAAGTGCAAACTCACCAGCTCCTTCAAAGTCTATCTGTCATAATGAAAGTGACAGTCCACGCGGGGAATCAGATGACCGTAGACAATCGTTTCCTTACACCACAACTACTAATGTTGTTCATGAACCCATAAAAGAAGAGGATGAAGAACTAGAAGATGAACAGTCTGGAAAAGATCTGGAGG AAAATAAAGTAAATGATGAAATTAACGATTTATCAGGTAGTCATACGCATGATCACTGTTCAAGGCTCTAGTTATTATCTGTTCAAGGGGTATTATTATTTTGTTTATTTGTCGGTCTAGTAGATGGCAAAGTGGTGATGAACACACTTTAAAATGTTTGCGGAAAAAAAGATGCCTAATGTCTTTGTTATCATTACTTATTTTACTTCAACTACTTTGATGACAACTGCCCATGCCCAACTTAAATTTATTTTTCATTAACTTTTTACCCTTAAGAGTTTTTTCCAGCTCCTTCCTTAGTTAAAATCATGATGATTTATTTTGACTGAGATTATATTTTAAAAATCTATCTGTTCTCTACTTGTCTTTCATGAATTGTATTTTGCTTAACAAACTCTATT                                            ]
[+] EMBL CD080462             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CGCGATCTCATGGCAGCTTTATCCACAGCACGACAGATGCAGATGTCAAGTGCAAACTCACCAGCTCCTTCAAAGTCTATCTGTCATAATGAAAGTGACAGTCCACGCGGGGAATCAGATGACCGTAGACAATCGTTTCCTTACACCACAACTACTAATGTTGTTCATGAACCCATAAAAGAAGAGGATGAAGAACTAGAAGATGAACAGTCTGGAAAAGATCTGGAGG AAAATAAAGTAAATGATGAAATTAACGATTTATCAGGTAGTCATACGCATGATCACTGTTCAAGGCTCTAGTTATTATCTGTTCAAGGGGTATTATTATTTTGTTTATTTGTCGGTCTAGTAGATGGCAAAGTGGTGATGAACACACTTTAAAATGTTTGCGGAAAAAAAGATGCCTAATGTCTTTGTTATCATTACTTATTTTACTTCAACTACTTTGATGACAACTGCCCATGCCCAACTTAAATTTATTTTTCATTAACTTTTTACCCTTAAGAGTTTTTTCCAGCTCCTTCCTTAGTTAAAATCATGATGATTTATTTTGACTGAGATTATATTTTAAAAATCTATCTGTTCTCTACTTGTCTTTCATGAATTGTATTTTGCTTAAACAACTCTAT                                             ]
[-] EMBL CD074274             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ATCTCATGGCAGCTTTATCCACAGCACGACAGATGCAGATGTCAAGTGCAAACTCACCAGCTCCTTCAAAGTCTATCTGTCATAATGAAAGTGACAGTCCACGCGGGGAATCAGATGACCGTAGACAATCGTTTCCTTACACCACAACTACTAATGTTGTTCATGAACCCATAAAAGAAGAGGATGAAGAACTAGAAGATGAACAGTCTGGAAAAGATCTGGAGG AAAATAAAGTAAATGATGAAATTAACGATTTATCAGGTAGTCATACGCATGATCACTGTTCAAGGCTCTAGTTATTATCTGTTCAAGGGGTATTATTATTTTGTTTATTTGTCGGTCTAGTAGATGGCAAAGTGGTGATGAACACACTTTAAAATGTTTGCGGAAAAAAAGATGCCTAATGTCTTTGTTATCATTACTTATTTTACTTCAACTACTTTGATGACAACTGCCCATGCCCAACTTAAATTTATTTTTCATTAACTTTTTACCCTTAAGAGTTTTTTCCAGCTCCTTCCTTAGTTAAAATCATGATGATTTATTTTGACTGAGATTATATTTTAAAAATCTATCTGTTCTCTACTTGTCTTTCATGAATTGTATTTTGCTTAACAAACTCTATT                                            ]
[-] EMBL CD074373             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CTCATGGCAGCTTTATCCACAGCACGACAGATGCAGATGTCAAGTGCAAACTCACCAGCTCCTTCAAAGTCTATCTGTCATAATGAAAGTGACAGTCCACGCGGGGAATCAGATGACCGTAGACAATCGTTTCCTTACACCACAACTACTAATGTTGTTCATGAACCCATAAAAGAAGAGGATGAAGAACTAGAAGATGAACAGTCTGGAAAAGATCTGGAGG AAAATAAAGTAAATGATGAAATTAACGATTTATCAGGTAGTCATACGCATGATCACTGTTCAAGGCTCTAGTTATTATCTGTTCAAGGGGTATTATTATTTTGTTTATTTGTCGGTCTAGTAGATGGCAAAGTGGTGATGAACACACTTTAAAATGTTTGCGGAAAAAAAGATGCCTAATGTCTTTGTTATCATTACTTATTTTACTTCAACTACTTTGATGACAACTGCCCATGCCCAACTTAAATTTATTTTTCATTAACTTTTTACCCTTAAGAGTTTTTTCCAGCTCCTTCCTTAGTTAAAATCATGATGATTTATTTTGACTGAGATTATATTTTAAAAATCTATCTGTTCTCTACTTGTCTTTCATGAATTGTATTTTGCTTAACAAACTCTATT                                            ]
[-] EMBL CD074143             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CTCATGGCAGCTTTATCCACAGCACGACAGATGCAGATGTCAAGTGCAAACTCACCAGCTCCTTCAAAGTCTATCTGTCATAATGAAAGTGACAGTCCACGCGGGGAATCAGATGACCGTAGACAATCGTTTCCTTACACCACAACTACTAATGTTGTTCATGAACCCATAAAAGAAGAGGATGAAGAACTAGAAGATGAACAGTCTGGAAAAGATCTGGAGG AAAATAAAGTAAATGATGAAATTAACGATTTATCAGGTAGTCATACGCATGATCACTGTTCAAGGCTCTAGTTATTATCTGTTCAAGGGGTATTATTATTTTGTTTATTTGTCGGTCTAGTAGATGGCAAAGTGGTGATGAACACACTTTAAAATGTTTGCGGAAAAAAAGATGCCTAATGTCTTTGTTATCATTACTTATTTTACTTCAACTACTTTGATGACAACTGCCCATGCCCAACTTAAATTTATTTTTCATTAACTTTTTACCCTTAAGAGTTTTTTCCAGCTCCTTCCTTAGTTAAAATCATGATGATTTATTTTGACTGAGATTATATTTTAAAAATCTATCTGTTCTCTACTTGTCTTTCATGAATTGTATTTTGCTTAACAAACTCTATT                                            ]
[+] EMBL CD192330             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TCTATCTGTCATAATGAAAGTGACAGTCCACGCGGGGAATCAGATGACCGTAGACAATCGTTTCCTTACACCACAACTACTAATGTTGTTCATGAACCCATAAAAGAAGAGGATGAAGAACTAGAAGATGAACAGTCTGGAAAAGATCTGGAGG AAAATAAAGTAAATGATGAAATTAACGATTTATCAGGTAGTCATACGCATGATCACTGTTCAAGGCTCTAGTTATTATCTGTTCAAGGGGTATTATTATTTTGTTTATTTGTCGG                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD072846             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ACCGTAGACAATCGTTTCCTTACACCACAACTACTAATGTTGTTCATGAACCCATAAAAGAAGAGGATGAAGAACTAGAAGATGAACAGTCTGGAAAAGATCTGGAGG AAAATAAAGTAAATGATGAAATTAACGATTTATCAGGTAGTCATACGCATGATCACTGTTCAAGGCTCTAGTTATTATCTGTTCAAGGGGTATTATTATTTTGTTTATTTGTCGGTCTAGTAGATGGNCAAGTGGTGATGAACACACTTTANAATGTTTGCGG AAAAAAGATGC                                                                                                                                                                                                                                                                              ]
[-] EMBL CD072678             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ACCGTAGACAATCG TTCCTTACACCACAACTACTAATGTTGTTCATGAACCCATAAAAGAAGAGGATGAAGAACTAGAAGATGAACAGTCTGGAAAAGATCTGGAGG AAAATAAAGTAAATGATGAAATTAACGATTTATCAGGTAGTCATACGCATGATCACTGTTCAAGGCTCTAGTTATTATCTGTTCAAGGGGTATTATTATTTTGTTTATTTGTCGGTCTAGTAGATGGCAAAGTGGTGATGAACACACTTTAAAATGTTTGCGGAAAAAAAGATGCCTAATGTCTTTGTTATCATTACTTATTTTACTTCAACTACTTTGA                                                                                                                                                                                                                                 ]
[-] EMBL CD072851             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ACCGTAGACAATCG TTCCTTACACCACAACTACTAATGTTGTTCGTGAACCCATAAAAGAAGAGGATGAAGAACTAGAAGATGAACAGTCTGGAAAAGATCTGGAGG AAAATAAAGTAAATGATGAAATTAACGATTTATCAGGTAGTCATACGCATGATCACTGTTCAAGGCTCTAGTTATTATCTGTTCAAGGGGTATTATTATTTTGTTTATTTGTCGGTCTAGTAGATGGCAAAGTGGCGATGAACACACTTTAAAATGTTTGCGGAAAAAAAGATGCCTAATGTCTTTGTTATCATTACTTATTTTACTTCAACTACTTTGA                                                                                                                                                                                                                                 ]
[+] EMBL CD072818             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ACCGTAGACAATCGTTTCCTTACACCACAACTACTAATGTTGTTCATGAACCCATAAAAGAAGAGGATGAAGAACTAGAAGATGAACAGTCTGGAAAAGATCTGGAGG AAAATAAAGTAAATGATGAAATTAACGATTTATCAGGTAGTCATACGCATGATCACTGTTCAAGGCTCTAGTTATTATCTGTTCAAGGGGTATTATTATTTTGTTTATTTGT                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD071733             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ACCGTAGACAATCGTTTCCTTACACCACAACTACTAATGTTGTTCATGAACCCATAAAAGAAGAGGATGAAGAACTAGAAGATGAACAGTCTGGAAAAGATCTGGAGG AAAATAAAGTAAATGATGAAATTAACGATTTATCAGGTAGTCATACGCATGATCAC                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL AI976392             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TGTTGTTCATGACCCCATAAAAGAAGAGGATGAAGAACTAGAAGATGAACAGTCTGGAAAAGATCTGGAGG AAAATAAAGTAAATGATGAAATTAACGATTTATCAGGTAGTCATACGCATGATCACTGTTCAAGGCTCTAGTTATTATCTGTTCAAGGGGTATTATTATTTTGTTTATTTGTCGGTCTAGTAGATGGCAAAGTGGTGATGAACACACTTTAAAATGTTTGCGGAAAAAAAGATGCCTAATGTCTTTGTTATCATTACTTATTTTACTTCAACTACTTTGATGACAACTGCCCATGCCCAACTTAAATTTATTTTTCATTAACTTTTTACCCTTAAGAGTTTTTTCCAGCTCCTTCCTTAGTTAAAATCATGATGATTTATTTTGACTGAGATTATATTTTAAAAATCTATCTGTTCTCTACTTGTCTTTCATGAATTGTATTTTGCTTAACAAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACCGTATGG]
[+] EMBL CD072860             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GATGAACAGTCTGGAAAAGATCTGGAGG AAAATAAAGTAAATGATGAAATTAACGATTTATCAGGTAGTCATACGCATGATCACTGTTCAAGGCTCTAGTTATTATCTGTTCAAGGGGTATTATTATTTTGTTTATTTGTCGGTCTAGTAGATGGCAAAGTGGTGATGAACACACTTTAGAATGTTTGCGGAAAAAAAGATGCCTAATGACTTTGTTATCATTACTTATTTTACTTCAACTACTTTGATGAC                                                                                                                                                                                                                             ]




>consensus_10649#0
AACGCAATCGCTTGATACGTCGGACATGCATGAGATATATTATGGCAAATCTAATAATTA
CAACTGCACATCTTAATGTCGTAGTCAAGAAGCGGTTTCCAACTTTTGAGCTTTTTGTTG
CTTCAGGCATACTTACCGAAGATGAGGCAAGAATTATTAGGAGTGTACAATCTGTTCATA
TGCAACCGTTTGTTCCTGTTGTATGGGCAACTTCTCTTATCACCTTAGCTAGAAAAGAAG
GACTAATCAAAAACCCTCATGCATACGTTCTTTTGGTAAATGAACTTAACACTTTCCGTC
AAAAAATATTATATGTAATGATGATGGATGATGTTTGTATTCCATTGGTTTATACACAGG
TTGTCACACTATCTGTATACTCCTATTTTGTCGCATCTCTTATAAGTAGTCAATTCATCA
TCAGCAGTTCACCTTTTGCAGGCATAGCACGTTCGCATGATGTTTTCTTCCCGTTTTTCA
CATTTCTGGAACTTTTTGTTTATGTGGGATGGCTAAAAGTTGCTGAAACACTTGTGAATC
CAATGGGAGAAGATGATGAAGATATTGATATTAATGAGATAATTGACTTTAATTGGAGAA
TTTCGTGGTGTGTGGTAGATGGAGTGAGAACAAGTGCACCTGCCATTGTACGAGACGCCC
ATTGGAGACAATCCGTTGTAGAACTTCCTCATACGGAACGGTCAAGACGTCTAACTGTCG
GATCAAGGAAAGGGTCTATTTATGATATGAATGTTCCTGTTGGTCCAGAACTGCGCGATC
TCATGGCAGCTTTATCCACAGCACGACAGATGCAGATGTCAAGTGCAAACTCACCAGCTC
CTTCAAAGTCTATCTGTCATAATGAAAGTGACAGTCCACGCGGGGAATCAGATGACCGTA
GACAATCGTTTCCTTACACCACAACTACTAATGTTGTTCATGAACCCATAAAAGAAGAGG
ATGAAGAACTAGAAGATGAACAGTCTGGAAAAGATCTGGAGGAAAATAAAGTAAATGATG
AAATTAACGATTTATCAGGTAGTCATACGCATGATCACTGTTCAAGGCTCTAGTTATTAT
CTGTTCAAGGGGTATTATTATTTTGTTTATTTGTCGGTCTAGTAGATGGCAAAGTGGTGA
TGAACACACTTTAAAATGTTTGCGGAAAAAAAGATGCCTAATGTCTTTGTTATCATTACT
TATTTTACTTCAACTACTTTGATGACAACTGCCCATGCCCAACTTAAATTTATTTTTCAT
TAACTTTTTACCCTTAAGAGTTTTTTCCAGCTCCTTCCTTAGTTAAAATCATGATGATTT
ATTTTGACTGAGATTATATTTTAAAAATCTATCTGTTCTCTACTTGTCTTTCATGAATTG
TATTTTGCTTAACAAACTCTATTAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTAC
CGTATGG

consensusID : consensus_10649#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 228
fasta sequence

                              [AGCAGGCACGAATTCGGTCCGAGGCATACTTACCGAAGATGAGGCAAGAATTATTAGGAGTGTACAATCTGTTCATATGCAACCGTTTGTTCCTGTTGTATGGGCAACTTCTCTTATCACCTTAGCTAGAAAAGAAGGACTAATCAAAAACCCTCATGCATACGTTCTTTTGGTAAATGAACTTAACACTTTCCGTCAAAAAATATTATATGTAATGATGATGGATGA]

[+] EMBL CD077583             [AGCAGGCACGAATTCGGTCCGAGGCATACTTACCGAAGATGAGGCAAGAATTATTAGGAGTGTACAATCTGTTCATATGCAACCGTTTGTTCCTGTTGTATGGGCAACTTCTCTTATCACCTTAGCTAGAAAAGAAGGACTAATCAAAAACCCTCATGCATACGTTCTTTTGGTAAATGAACTTAACACTTTCCGTCAAAAAATATTATATGTAATGATGATGGATGA]




>consensus_10649#1
AGCAGGCACGAATTCGGTCCGAGGCATACTTACCGAAGATGAGGCAAGAATTATTAGGAG
TGTACAATCTGTTCATATGCAACCGTTTGTTCCTGTTGTATGGGCAACTTCTCTTATCAC
CTTAGCTAGAAAAGAAGGACTAATCAAAAACCCTCATGCATACGTTCTTTTGGTAAATGA
ACTTAACACTTTCCGTCAAAAAATATTATATGTAATGATGATGGATGA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10649#0      AACGCAATCGCTTGATACGTCGGACATGCATGAGATATATTATGGCAAATCTAATAATTA 60
consensus_10649#1      ------------------------------------------------------------
                                                                                   

consensus_10649#0      CAACTGCACATCTTAATGTCGTAGTCAAGAAGCGGTTTCCAACTTTTGAGCTTTTTGTTG 120
consensus_10649#1      ----------------------------------------AGCAGGCACGAATTCGGTC- 19
                                                               * *      *  **  **  

consensus_10649#0      CTTCAGGCATACTTACCGAAGATGAGGCAAGAATTATTAGGAGTGTACAATCTGTTCATA 180
consensus_10649#1      --CGAGGCATACTTACCGAAGATGAGGCAAGAATTATTAGGAGTGTACAATCTGTTCATA 77
                           ********************************************************

consensus_10649#0      TGCAACCGTTTGTTCCTGTTGTATGGGCAACTTCTCTTATCACCTTAGCTAGAAAAGAAG 240
consensus_10649#1      TGCAACCGTTTGTTCCTGTTGTATGGGCAACTTCTCTTATCACCTTAGCTAGAAAAGAAG 137
                       ************************************************************

consensus_10649#0      GACTAATCAAAAACCCTCATGCATACGTTCTTTTGGTAAATGAACTTAACACTTTCCGTC 300
consensus_10649#1      GACTAATCAAAAACCCTCATGCATACGTTCTTTTGGTAAATGAACTTAACACTTTCCGTC 197
                       ************************************************************

consensus_10649#0      AAAAAATATTATATGTAATGATGATGGATGATGTTTGTATTCCATTGGTTTATACACAGG 360
consensus_10649#1      AAAAAATATTATATGTAATGATGATGGATGA----------------------------- 228
                       *******************************                             

consensus_10649#0      TTGTCACACTATCTGTATACTCCTATTTTGTCGCATCTCTTATAAGTAGTCAATTCATCA 420
consensus_10649#1      ------------------------------------------------------------
                                                                                   

consensus_10649#0      TCAGCAGTTCACCTTTTGCAGGCATAGCACGTTCGCATGATGTTTTCTTCCCGTTTTTCA 480
consensus_10649#1      ------------------------------------------------------------
                                                                                   

consensus_10649#0      CATTTCTGGAACTTTTTGTTTATGTGGGATGGCTAAAAGTTGCTGAAACACTTGTGAATC 540
consensus_10649#1      ------------------------------------------------------------
                                                                                   

consensus_10649#0      CAATGGGAGAAGATGATGAAGATATTGATATTAATGAGATAATTGACTTTAATTGGAGAA 600
consensus_10649#1      ------------------------------------------------------------
                                                                                   

consensus_10649#0      TTTCGTGGTGTGTGGTAGATGGAGTGAGAACAAGTGCACCTGCCATTGTACGAGACGCCC 660
consensus_10649#1      ------------------------------------------------------------
                                                                                   

consensus_10649#0      ATTGGAGACAATCCGTTGTAGAACTTCCTCATACGGAACGGTCAAGACGTCTAACTGTCG 720
consensus_10649#1      ------------------------------------------------------------
                                                                                   

consensus_10649#0      GATCAAGGAAAGGGTCTATTTATGATATGAATGTTCCTGTTGGTCCAGAACTGCGCGATC 780
consensus_10649#1      ------------------------------------------------------------
                                                                                   

consensus_10649#0      TCATGGCAGCTTTATCCACAGCACGACAGATGCAGATGTCAAGTGCAAACTCACCAGCTC 840
consensus_10649#1      ------------------------------------------------------------
                                                                                   

consensus_10649#0      CTTCAAAGTCTATCTGTCATAATGAAAGTGACAGTCCACGCGGGGAATCAGATGACCGTA 900
consensus_10649#1      ------------------------------------------------------------
                                                                                   

consensus_10649#0      GACAATCGTTTCCTTACACCACAACTACTAATGTTGTTCATGAACCCATAAAAGAAGAGG 960
consensus_10649#1      ------------------------------------------------------------
                                                                                   

consensus_10649#0      ATGAAGAACTAGAAGATGAACAGTCTGGAAAAGATCTGGAGGAAAATAAAGTAAATGATG 1020
consensus_10649#1      ------------------------------------------------------------
                                                                                   

consensus_10649#0      AAATTAACGATTTATCAGGTAGTCATACGCATGATCACTGTTCAAGGCTCTAGTTATTAT 1080
consensus_10649#1      ------------------------------------------------------------
                                                                                   

consensus_10649#0      CTGTTCAAGGGGTATTATTATTTTGTTTATTTGTCGGTCTAGTAGATGGCAAAGTGGTGA 1140
consensus_10649#1      ------------------------------------------------------------
                                                                                   

consensus_10649#0      TGAACACACTTTAAAATGTTTGCGGAAAAAAAGATGCCTAATGTCTTTGTTATCATTACT 1200
consensus_10649#1      ------------------------------------------------------------
                                                                                   

consensus_10649#0      TATTTTACTTCAACTACTTTGATGACAACTGCCCATGCCCAACTTAAATTTATTTTTCAT 1260
consensus_10649#1      ------------------------------------------------------------
                                                                                   

consensus_10649#0      TAACTTTTTACCCTTAAGAGTTTTTTCCAGCTCCTTCCTTAGTTAAAATCATGATGATTT 1320
consensus_10649#1      ------------------------------------------------------------
                                                                                   

consensus_10649#0      ATTTTGACTGAGATTATATTTTAAAAATCTATCTGTTCTCTACTTGTCTTTCATGAATTG 1380
consensus_10649#1      ------------------------------------------------------------
                                                                                   

consensus_10649#0      TATTTTGCTTAACAAACTCTATTAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTAC 1440
consensus_10649#1      ------------------------------------------------------------
                                                                                   

consensus_10649#0      CGTATGG 1447
consensus_10649#1      -------