cluster # 10652

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Schistosoma mansoni
cluster # 10652 cluster # 10652 Sequences # 19 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10652#0 length = 2582 sequences # 18

consensus_10652#1 length = 273 sequences # 1

consensusID : consensus_10652#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 18
consensus length = 2582
fasta sequence

                              [GGACCATAGACACCATTCAGAAGACTTAAAGCTTCATTAATTAACTCGAAACCTTCTTGAAGATGACCAGCAGAAATCCGAGCTTGACCAGTTGTAAAATAATGATAAGCATCAGTTGCATGAGGATGTAAATGTTTGACTATTGGATAAAGAGATATTATATCTTCAGTATTAAATACTGGTTTTTGATGATGTTTAACACCATTCGGTAGATTGAGATTATACTCACGTAAAAGTAGCTGAATACCAACATATGTACAAAATGTTCTAAGAAGCTGAATACGTTGAACTTCATAACTTTTACAGAATTCATCAATGTCTGACGCAGTTATTTGATAATGATAATATTCCTTAGCTTCTTTAATTATTTCAGACCATAAACTGGAATGTGTTTCATTAAGCCATGCCATTTCTTCTGGTGATTCACGAAGATTTTTCAATTTCTTCTTATTTTTTTTATTACGATTCAGTTTGAGGACTTGCTCATCAATCCCAAGTAACGGTGTAAGATTAGGACAAGC-TGTTAGAAAACAGTTGAGAAAATGAGCGACCCCAACAGAAAGAAGCATAGGATCAACATCTTGAAGATACGTTTTAAATAAATGTTTCGCAGACCGTAACAAAACTTCGCAAATAGCCATTTTTTTCAGATAACCTAACGACTGGTGAATACTGACTGACTCGATTACACGATTCAAATAACGTACATTAATGCCACGCTGATGCATTAACTCTATCAGGGCTCTACCATCTTGAGGAGTGATGCACAAACTTAACGCGTCTCTAACAAATGCTGGAATTTGTTTTAGAACCAAAAATTCACAAGCACTGCATACTAGTTCTTGGTCAACTGTTAATGATTGTTCCTCTGAATCACAAAATTTGACAAATTTCTGATAAATATCAGGATTGAATGTAAGTTCAAAACGATCGGTACTCTGAGAACCGACAGCTTCTGCTGCTTTGCGGATAGCTTCTCGAATTACGTCATTTTTTTGTGTGTCTTGATCATCTTCCAGTAATTTTTTCATCAGGGTTAAATCATCTGATTGATTCTTGC-TTGGAGACTTGATTGTCCCAATCCCTGAGTTCAAAGCATTACTGGAGTGTCCAGTAACATCATGGTGATCTATTTGATGTTTGGTTGTAACTAGACTATTTTTAGGAGACAATGGATCATCATTAGTGCTTGAACAGTTGGCTTGTTTATTTTGCACACCAGTAGTATCCTGATCATCACGTTCACCTTTTGAGGATTTACTCTTCTGGATCTCTAGAGCAGTCAGACGTAGAAAAATTTCATAACGATGGTCAAAAAACGCCTCGATTAACTCTTGTCTTAAAGTCGCCAACATATGTCGATGTTGATAAGGATAACCTAATTTCACCAATTCANGAGACAATTGAGGTCGTATATCACTACCATTATCTAAATAGTTTAGATCTGGTGGGGAAGTACGTAATAAATCCAGAA-ATATAGTTCGATTATCATTCCCAAACAT-CCCTTAC-ATCCACAGATGAATATAACTGTATTGTATCACCTGAATGATTGACAACCTTATGTGGCTTGATTTTCAATTGTTTAGCTGTTTTAGACAATAGCTCTTCATAACGTTTATCGGTGAGCACTGTCTTACCAAAATCGATTGAACCATAAACAACTAACTGTTCTTGTTCCTTCTCCAAAATACCTGGTATGATTGTTTGAGCGGTAACACGAAAGCCACGGTAATCAATAATAGCTGTTCCAAGAGTATACAATCCAGGTTGATCTAGCATTGAATATGCACGTACTCCACACAAATCACTAGATGTAGCAGCATATGCGGCATATTCACCACCGAAATGCTTGTAATGATCTTTAACGTCAAATCCAAGTGAGAAAAACATATTATTCCAGATAAACATTTGTTGTTTACGTGTTTCTCCCGGGTTAATAGCCATAATATCTCCATTTACTACGCTAACTGCAGCACGAGTTGCCGCAGCAACAAAATCACTGTTTGATTTGAAAATAGCACGGTCTCTAAGTAGCCGCTCTGTAAGACGTGTCTGTGGAAGTTCACGCGTAACTTGTAGCTCTTCGTTCCAGTCCCTAGTTTGACCGGGCAAATTTTCTTCGCACGCCATGCGAGAAGAAAACGCTTCTTCTTTTCTTACAGAATCTGGGGAATGTTCGACTAGCGGCGCTAACCANGAATGAACTTGATACGGAGTCGGAACACGCTCAAATGGGTGTTTAGCAGCTCGATTTTTTAATAGAGACTCAAAATTGCGCTTGAATCCTGGGCTAAGTTGACGCAGGAGATCGATCAGAGAATGTGCTACATAAGCATGTTGTATGGGGTGGGGATTAAACTGATCATCCGTGGACATATTTACATAAAATCCTCTGGGACAAGCAGTTATATGGTACTTTTTGTCTTCTAACGTGTGAAAAAATAAATAAATCAGATCTCCTAATAGTCGTCTTGCAGGTGGTGGAGGGTTCCAGTTACTATAATTTAATTGGCGAACGCATTTAACTGGCTTTCCGTCACGGTCCAAAGGATGTACAGGCAATAATGGGAGGTTGGTGTCTG]

[+] EMBL CD067177             [GGACCATAGACACCATTCAGAAGACTTAAAGCTTCATTAATTAACTCGAAACCTTCTTGAAGATGACCAGCAGAAATCCGAGCTTGACCAGTTGTAAAATAATGATAAGCATCAGTTGCATGAGGATGTAAATGTTTGACTATTGGATAAAGAGATATTATATCTTCAGTATTAAATACTGGTTTTTGATGATGTTTAACACCATTCGGTAGATTGAGATTATACTCACGTAAAAGTAGCTGAATACCAACATATGTACAAAATGTTCTAAGAAGCTGAATACGTTGAACTTCATAACTTTTACAGAATTCATCAATGTCTGACGCAGTTATTTGATAATGATAATATTCCTTAGCTTCTTTAATTATTTCAGACCATAAACTGGAATGTGTTTCATTAAGCCATGCCATTTCTTCTGGTGATTCACGAAGATTTTTCAATTTCTTCTTATTTTTTTTATTACGATTCAGTTTGAGGACTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD097240             [                                                                                                                                                                                                                                               CTGAATACCAACATATGTACAAAATGTTCTAAGAAGCTGAATACGTTGAACTTCATAACTTTTACAGAATTCATCAATGTCTGACGCAGTTATTTGATAATGATAATATTCCTTAGCTTCTTTAATTATTTCAGACCATAAACTGGAATGTGTTTCATTAAGCCATGCCATTTCTTCTGGTGATTCACGAAGATTTTTCAATTTCTTCTTATTTTTTTTATTACGATTCAGTTTGAGGACTTGCTCATCAATCCCAAGTAACGGTGTAAGATTAGGACAAGC TGTTAGAAAACAGTTGAGAAAATGAGCGACCCCAACAGAAAGAAGCATAGGATCAACATCTTGAAGATACGTTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD097226             [                                                                                                                                                                                                                                                                                                                                                                                                                      CCATTTCTTCTGGTGATTCACGAAGATTTTTCAATTTCTTCTGATTTTTTTTATTACGATTCAGTTTGAGGACTTGCTCATCAATCCCAAGTAACGGTGTAAGATTAGGACAAGC TGTTAGAAAACAGTTGAGAAAATGAGCGACCCCAACAGAAAGAAGCATAGGATCAACATCTTGAAGATACGTTTTAAATAAATGTTTCGCAGACCGTAACAAAACTTCGCAAATAGCCATTTTTTTCAGATAACCTAACGACTGGTGAATACTGACTGACTCGATTACACGATTCAAATAACGTACATTAATGCCACGCTGATGCATTAACTCTATCAGGGCTCTACCATCTTGAGGAGTGATGCACAAACTTAACGCGTCTCTAACAAATGCAGGAATTTGTTTTAGAACCAAAAATTCACAAGCACTGCATACTAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD147094             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ACAAGCGTGTTAGAAAACAGTTGAGAAAATGAGCGACCCCAACAGAAAGAAGCATAGGATCAACATCTTGAAGATACGTTTTAAATAAATGTTTCGCAGACCGTAACAAAACTTCGCAAATAGCCATTTTTTTCAGATAACCTAACGACTGGTGAATACTGACTGACTCGATTACACGATTCAAATAACGTACATTAATGCCACGCTGATGCATTAACTCTATCAGGGCTCTACCATCTTGAGGAGTGATGCACAAACTTAACGCGTCTCTAACAAATGCTGGAATTTGTTTTAGAACCAAAAATTCACAAGCACTGCATACTAGTTCTTGGTCAACTGTTAATGATTGTTCCTCTGAATCACAAAATTTGACAAATTTCTGATAAATATCAGGATTGAATGTAAGTTCAAAACGATCGGTACTCTGAGAACCGACAGCTTCTGCTGCTTTGCGGATAGCTTCTCGAATTACGTCATTTTTTTGTGTGTCTTGATCATCTTCCAGTAATTTTTTCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD129399             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AGAAAACAGTTGAGAAAATGAGCGACCCCAACAGAAAGAAGCATAGGATCAACATCTTGAAGATACGTTTTAAATAAATGTTTCGCAGACCGTAACAAAACTTCGCAAATAGCCATTTTTTTCAGATAACCTAACAACTGGTGAATACTGACTGACTCGATTACACGATTCAAATAACGTACATTAATGCCACGCTGATGCATTAACTCTATCAGGGCTCTACCATCTTGAGGAGTGATGCACAAACTTAACGCGTCTCTAACAAATGCTGGAATTTGTTTTAGAACCAAAAATTCACAAGCACTGCATACTAGTTCTTGGTCAACTGTTAATGATTGTTCCTCTGAATCACAAAATTTGACAAATTTCTGATAAATATCAGGATTGAATGTAAGTTCAAAACGATCGGTACTCTGAGAACCGACAGCTTCTGCTGCTTTGCGGATAGCTTCTCGAATTACGTCA TTTTTTGTGTGTCTTGATCATCTTCCAGTAATTTTTTCATCAGGGTTAAATCATCTGATTGATTCTTGC TTGGAGACTTGATTGTCCCAATCCCTGAGTTCAAAGCATTACTGGGGTGTCCAGTAACATCATGGTGATCTATTTGATGTTTGGTTGTAACTAGACTATTTTTAGGAGACAATGGATCATCATTAGTGCTTGAACAGTTGGCTTGTTTATTTTGCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD115253             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TGTTTCGCAGACCGTAACAAAACTTCGCAAATAGCCATTTTTTTCAGATAACCTAACGACTGGTGAATACTGACTGACTCGATTACACGATTCAAATAACGTACATTAATGCCACGCTGATGCATTAACTCTATCAGGGCTCTACCATCTTGAGGAGTGATGCACAAACTTAACGCGTCTCTAACAAACGCTGGAATTTGTTTTAGAACCAAAAATTCACAAGCACTGCATACTAGTTCTTGGTCAACTGTTAATGATTGTTCCTCTGAATCACAAAATTTGACAAATTTCTGATAAATATCAGGATTGAATGTAAGTTCAAAACGATCGGTACTCTGAGAACCGACAGCTTCTGCTGCTTTGCGGATAGCTTCTCGAATTACGTCATTTTTTTGTGTGTCTTGATCATCTTCCAGTAATTTTTTCATCAGGGTTAAATCATCTGATTGATTCTTGC TTGGAGACTTGATTGTCCCAATCCCTGAGTTCAAAGCATTACTGGAGTGTCCAGTAACATCATGGTGATCTATTTGATGTTTGGTTGTAACTAGACTATTTTTANGAGACAATGGATCATCATTAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CD147177             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AAACTTCGCAAATAGCCATTTTTTTCAGATAACCTAAAGACTGGTGAATACTGACTGACTCGATTACACGATTCAAATAACGTACATTAATGCCACGCTGATGCATTAACTCTATCAGGGCTCTACCATCTTGAGGAGTGATGCACAAACTTAACGCGTCTCTAACAAATGCTGGAATTTGTTTTAGAACCAAAAATTCACAAGCACTGCATACTAGTTCTTGGTCAACTGTTAATGATTGTTCCTCTGAATCACAAAATTTGACAAATTTCTGATAAATATCAGGATTGAATGTAAGTTCAAAACGATCGGTACTCTGAGAACCGACAGCTTCTGCTGCTTTGCGGATAGCTTCTCGAATTACGTCATTTTTTTGTGTGTCTTGATCATCTTCCAGTAATTTTTTCATCAGGGTTAAATCATCTGATTGATTCTTGC TTGGAGACTTGATTGTCCCAATCCCTGAGTTCAAAGCATTACTGGAGTGTCCAGTAACATCATGGTGATCTATTTGATGTTTGGTTGTAACTAGACTATTTTTAGGAGACAATGGATCATCATTAGTGCTTGAACAGTTGGCTTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD119810             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GAGTGATGCACAAACTTAACGCGTCTCTAACAAATGCTGGAATTTGTTTTAGAACCAAAAATTCACAAGCACTGCATACTAGTTCTTGGTCAACTGTTAATGATTGTTCCTCTGAATCACAAAATTTGACAAATTTCTGATAAATATCAGGATTGAATGTAAGTTCAAAACGATCGGTACTCTGAGAACCGACAGCTTCTGCTGCTTTGCGGATAGCTTCTCGAATTACGTCATTTTTTTGTGTGTCTTGATCATCTTCCAGTAATTTTTTCATCAGGGTTAAATCATCTGATTGATTCTTGC TTGGAGACTTGATTGTCCCAATCCCTGAGTTCAAAGCATTACTGGAGTGTCCAGTAACATCATGGTGATCTATTTGATGTTTGGTTGTAACTAGACTATTTTTAGGAGACAATGGATCATCATTAGTGCTTGAACAGTTGGCTTGTTTATTTTGCACACCAGTAGTATCCTGATCATCACGTTCACCTTTTGAGGATTTACTCTTCTGGATCTCTAGAGCAGTCAGACGTAGAAAAATTTCATAACGATGGTCAAAAAACGCCTCGATTAACTCTTGTCTTAAAGTCGCCAACATATGTCGATGTTGATAAGGATAACCTAATTTCACCAATTCANGAGACAATTGAGGTCGTATATCACTACCATTATCTAAATAGTTTAGATCTGGTGGGGAAGTACGTAATAAATCCAGAA ATATAGTTCGATTATCATTCCCAAACAT CCCTTAC ATCCACAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD067490             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TAGAACCAAAAATTCACAAGCACTGCATACTAGTTCCTGGTCAACTGTTAATGATTGTTCCTCTGAATCACAAAATTTGACAAATTTCTGATAAATATCAGGATTGAATGTAAGTTCAAAACGATCGGTACTCTGAGAACCGACAGCTTCTGCTGCTTTGCGGATAGCTTCTCGAATTACGTCATTTTTTTGTGTGTCTTGATCATCTTCCAGTAATTTTTTCATCAGGGTTAAATCATCTGATTGATTCTTGC TTGGAGACTTGATTGTCCCAATCCCTGAGTTCAAAGCATTACTGGAGTGTCCAGTAACATCATGGTGATCTATTTGATGTTTGGTTGTAACTAGACTATTTTTAGGAGACAATGGATCATCATTAGTGCTTGAACAGTTGGCTTGTTTATTTTGCACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CD096474             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TCAGGGTTAAATCATCTGATTGATTC TGCTTTGGAGACTTGATTGTCCCAATCCCTGAGTTCAAAGCATTACTGGAGTGTCCAGTAACATCATGGTGGTCTATNTGATGTTTGGTTGTAACTAGACTATTTTTAGGAGACAATGGATCATCATTAGTGCTTGAACAGTTGGCTTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD182073             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AGTCAGACGTAGAAAAATTTCATAACGATGGTCAAAAAACGCCTCGATTAACTCTTGTCTTAAAGTCGCCAACATATGTCGATGTTGATAAGGATAACCTAATTTCACCAATTCAGGAGACAATTGAGGTCGTATATCACTACCATTATCTAAATAGTTTAGATCTGGTGGGAAAGTACGTAATAAATCCAGAATATA AGTTCGATTATCATTCCCAACAATCCCCTTACAATCCACAGATGAATATAACTGTATTGTATCACCTGAATGATTGACAACCTTATGTGGCTTGATTTTCAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD156117             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TAACTGTATTGTATCACCTGAATGATTGACAACCTTATGTGGCTTGATTTTCAATTGTTTAGCTGTTTTAGACAATAGCTCTTCATAACGTTTATCGGTGAGCACTGTCTTACCAAAATCGATTGAACCATAAACAACTAACTGTTCTTGTTCCTTCTCCAAAATACCTGGTATGATTGTTTGAGCGGTAACACGAAAGCCACGGTAATCAATAATAGCTGTTCCAAGAGTATACAATCCAGGTTGATCTAGCATTGAATATGCACGTACTCCACACAAATCACTAGATGTAGCAGCATATGCGGCATATTCACCACCGAAATGCTTGTAATGATCTTTAACGTCAAATCCAAGTGAGAAAAACATATTATTCCAGATAAACATTTGTTGTTTACGTGTTTCTCCCGGGTTAATAGCCATAATATCTCCATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD115540             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GCACTGTCTTACCAAAATCGATTGAACCATAAACAACTAACTGTTCTTGTTCCTTCTCCAAAATACCTGGTATGATTGTTTGGGCGGTAACACGAAAGCCACGGTAATCAATAATAGCTGTTCCAAGAGTATACAATCCAGGTTGATCTAGCATTGAATATGCACGTACTCCACACAAATCACTAGATGTAGCAGCATATGCGGCATATTCACCACCGAAATGCTTGTAATGATCTTTAACGTCAAATCCAAGTGAGAAAAACATATTATTCCAGATAAACATTTGTTGTTTACGTGTTTCTCCCGGGTTAATAGCCATAATATCTCCATTTACTACGCTAACTGCAGCACGAGTTGCCGCAGCAACAAAATCACTGTTTGATTTGAAAATAGCACGGTCTCTAAGTAGCCGCTCTGTAAGACGTGTCTGTGGAAGTTCACGCGTAACTTGTAGCTCTTCGTTCCAGTCCCTAGTTTGACCGGGCAAATTTTCTTCGCACGCCATGCGAGAAGAAAACGCTTCTTCTTTTCTTACAGAATCTGGGGAATGTTCGACTAGCGGCGCTAACCANGAATGAACTTGATACGGAGTCGGAACACGCTCAAAT                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD158494             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CCGAAATGCTTGTAATGATCTTTAACGTCAAATCCAAGTGAGAAAAACACATTATTCCAGATAAACATTTGTTGTTTACGTGTTTCTCCCGGGTTAATAGCCATAATATCTCCATTTACTACGCTAACTGCAGCACGAGTTGCCGCAGCAACAAAATCACTGTTTGATTTGAAAATAGCACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD158676             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CGAAATGCTTGTAATGATCTTTAACGTCAAATCCAAGTGAGAAAAACATATTATTCCAGATAAACATTTGTTGTTTACGTGTTTCTCCCGGGTTAATAGCCATAATATCTCCATTTACTACGCTAACTGCAGCACGAGTTGCCGCAGCAACAAAATCACTGTTTGATTTGAAAATAGCACGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD120745             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CGAAATGCTTGTAATGATCTTTAACGTCAAATCCAAGTGAGAAAAACATATTATTCCAGATAAACATTTGTTGTTTACGTGTTTCTCCCGGGTTAATAGCCATAATATCTCCATTTACTACGCTAACTGCAGCACGAGTTGCCGCAGCAACAAAATCACTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD163227             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TCCCTAGTTTGACCGGGCAAATTTTCTTCGCACGCCATGCGAGAAGAAAACGCTTCTTCTTTTCTTACAGAATCTGGGGAATGTTCGACTAGCGGCGCTAACCAGGAATGAACTTGATACGGAGTCGGAACACGCTCAAATGGGTGTTTAGCAGCTCGATTTTTTAATAGAGACTCAAAATTGCGCTTGAATCCTGGGCTAAGTTGACGCAGGAGATCGATCAGAGAATGTGCTACATAAGCATGTTGTATGGGGTGGGGATTAAACTGATCATCCGTGGACATATTTACATAAAATCCTCTGGGACAAGCAGTTATATGGTACTTTTTGTCTTCTAACGTGTGAAAAAATAAATAAATCAGATCTCCTAATAGTCGTCTTGCAGGTGGTGGAGGGTTCCAGTTACTATAATT                                                                             ]
[+] EMBL CD121410             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TAATAGAGACTCAAAATTGCGCTTGAATCCTGGGCTAAGTTGACGCAGGAGATCGATCAGAGAATGTGCTACATAAGCATGTTGTATGGGGTGGGGATTAAACTGATCATCCGTGGACATATTTACATAAAATCCTCTGGGACAAGCAGTTATATGGTACTTTTTGTCTTCTAACGTGTGAAAAAATAAATAAATCAGATCTCCTAATAGTCGTCTTGCAGGTGGTGGAGGGTTCCAGTTACTATAATTTAATTGGCGAACGCATTTAACTGGCTTTCCGTCACGGTCCAAAGGATGTACAGGCAATAATGGGAGGTTGGTGTCTG]




>consensus_10652#0
GGACCATAGACACCATTCAGAAGACTTAAAGCTTCATTAATTAACTCGAAACCTTCTTGA
AGATGACCAGCAGAAATCCGAGCTTGACCAGTTGTAAAATAATGATAAGCATCAGTTGCA
TGAGGATGTAAATGTTTGACTATTGGATAAAGAGATATTATATCTTCAGTATTAAATACT
GGTTTTTGATGATGTTTAACACCATTCGGTAGATTGAGATTATACTCACGTAAAAGTAGC
TGAATACCAACATATGTACAAAATGTTCTAAGAAGCTGAATACGTTGAACTTCATAACTT
TTACAGAATTCATCAATGTCTGACGCAGTTATTTGATAATGATAATATTCCTTAGCTTCT
TTAATTATTTCAGACCATAAACTGGAATGTGTTTCATTAAGCCATGCCATTTCTTCTGGT
GATTCACGAAGATTTTTCAATTTCTTCTTATTTTTTTTATTACGATTCAGTTTGAGGACT
TGCTCATCAATCCCAAGTAACGGTGTAAGATTAGGACAAGCTGTTAGAAAACAGTTGAGA
AAATGAGCGACCCCAACAGAAAGAAGCATAGGATCAACATCTTGAAGATACGTTTTAAAT
AAATGTTTCGCAGACCGTAACAAAACTTCGCAAATAGCCATTTTTTTCAGATAACCTAAC
GACTGGTGAATACTGACTGACTCGATTACACGATTCAAATAACGTACATTAATGCCACGC
TGATGCATTAACTCTATCAGGGCTCTACCATCTTGAGGAGTGATGCACAAACTTAACGCG
TCTCTAACAAATGCTGGAATTTGTTTTAGAACCAAAAATTCACAAGCACTGCATACTAGT
TCTTGGTCAACTGTTAATGATTGTTCCTCTGAATCACAAAATTTGACAAATTTCTGATAA
ATATCAGGATTGAATGTAAGTTCAAAACGATCGGTACTCTGAGAACCGACAGCTTCTGCT
GCTTTGCGGATAGCTTCTCGAATTACGTCATTTTTTTGTGTGTCTTGATCATCTTCCAGT
AATTTTTTCATCAGGGTTAAATCATCTGATTGATTCTTGCTTGGAGACTTGATTGTCCCA
ATCCCTGAGTTCAAAGCATTACTGGAGTGTCCAGTAACATCATGGTGATCTATTTGATGT
TTGGTTGTAACTAGACTATTTTTAGGAGACAATGGATCATCATTAGTGCTTGAACAGTTG
GCTTGTTTATTTTGCACACCAGTAGTATCCTGATCATCACGTTCACCTTTTGAGGATTTA
CTCTTCTGGATCTCTAGAGCAGTCAGACGTAGAAAAATTTCATAACGATGGTCAAAAAAC
GCCTCGATTAACTCTTGTCTTAAAGTCGCCAACATATGTCGATGTTGATAAGGATAACCT
AATTTCACCAATTCANGAGACAATTGAGGTCGTATATCACTACCATTATCTAAATAGTTT
AGATCTGGTGGGGAAGTACGTAATAAATCCAGAAATATAGTTCGATTATCATTCCCAAAC
ATCCCTTACATCCACAGATGAATATAACTGTATTGTATCACCTGAATGATTGACAACCTT
ATGTGGCTTGATTTTCAATTGTTTAGCTGTTTTAGACAATAGCTCTTCATAACGTTTATC
GGTGAGCACTGTCTTACCAAAATCGATTGAACCATAAACAACTAACTGTTCTTGTTCCTT
CTCCAAAATACCTGGTATGATTGTTTGAGCGGTAACACGAAAGCCACGGTAATCAATAAT
AGCTGTTCCAAGAGTATACAATCCAGGTTGATCTAGCATTGAATATGCACGTACTCCACA
CAAATCACTAGATGTAGCAGCATATGCGGCATATTCACCACCGAAATGCTTGTAATGATC
TTTAACGTCAAATCCAAGTGAGAAAAACATATTATTCCAGATAAACATTTGTTGTTTACG
TGTTTCTCCCGGGTTAATAGCCATAATATCTCCATTTACTACGCTAACTGCAGCACGAGT
TGCCGCAGCAACAAAATCACTGTTTGATTTGAAAATAGCACGGTCTCTAAGTAGCCGCTC
TGTAAGACGTGTCTGTGGAAGTTCACGCGTAACTTGTAGCTCTTCGTTCCAGTCCCTAGT
TTGACCGGGCAAATTTTCTTCGCACGCCATGCGAGAAGAAAACGCTTCTTCTTTTCTTAC
AGAATCTGGGGAATGTTCGACTAGCGGCGCTAACCANGAATGAACTTGATACGGAGTCGG
AACACGCTCAAATGGGTGTTTAGCAGCTCGATTTTTTAATAGAGACTCAAAATTGCGCTT
GAATCCTGGGCTAAGTTGACGCAGGAGATCGATCAGAGAATGTGCTACATAAGCATGTTG
TATGGGGTGGGGATTAAACTGATCATCCGTGGACATATTTACATAAAATCCTCTGGGACA
AGCAGTTATATGGTACTTTTTGTCTTCTAACGTGTGAAAAAATAAATAAATCAGATCTCC
TAATAGTCGTCTTGCAGGTGGTGGAGGGTTCCAGTTACTATAATTTAATTGGCGAACGCA
TTTAACTGGCTTTCCGTCACGGTCCAAAGGATGTACAGGCAATAATGGGAGGTTGGTGTC
TG

consensusID : consensus_10652#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 273
fasta sequence

                              [ATTTTTTAATAGAGACTCAAAATTGCGCTTGAATCCTGGGCTAAGTTGACGCAGGAGATCGATCAGAGAATGTGCTACATAAGCATGTTGTATGGGGTGGGGATTAAACTGATCATCCGTGGACATATTTACATAAAATCCTCTGGGACAAGCAGTTATATGGTACTTTTTGTCTTCTAACGTGTGAAAAAATAAATAAATCAGATCTCCTAATAGTCGTCTTGCAGGTGGTGGAGGGTTCCAGTTACTATAATTTAATTGGCGGAGCAGCAG]

[-] EMBL CD163745             [ATTTTTTAATAGAGACTCAAAATTGCGCTTGAATCCTGGGCTAAGTTGACGCAGGAGATCGATCAGAGAATGTGCTACATAAGCATGTTGTATGGGGTGGGGATTAAACTGATCATCCGTGGACATATTTACATAAAATCCTCTGGGACAAGCAGTTATATGGTACTTTTTGTCTTCTAACGTGTGAAAAAATAAATAAATCAGATCTCCTAATAGTCGTCTTGCAGGTGGTGGAGGGTTCCAGTTACTATAATTTAATTGGCGGAGCAGCAG]




>consensus_10652#1
ATTTTTTAATAGAGACTCAAAATTGCGCTTGAATCCTGGGCTAAGTTGACGCAGGAGATC
GATCAGAGAATGTGCTACATAAGCATGTTGTATGGGGTGGGGATTAAACTGATCATCCGT
GGACATATTTACATAAAATCCTCTGGGACAAGCAGTTATATGGTACTTTTTGTCTTCTAA
CGTGTGAAAAAATAAATAAATCAGATCTCCTAATAGTCGTCTTGCAGGTGGTGGAGGGTT
CCAGTTACTATAATTTAATTGGCGGAGCAGCAG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10652#0      GGACCATAGACACCATTCAGAAGACTTAAAGCTTCATTAATTAACTCGAAACCTTCTTGA 60
consensus_10652#1      ------------------------------------------------------------
                                                                                   

consensus_10652#0      AGATGACCAGCAGAAATCCGAGCTTGACCAGTTGTAAAATAATGATAAGCATCAGTTGCA 120
consensus_10652#1      ------------------------------------------------------------
                                                                                   

consensus_10652#0      TGAGGATGTAAATGTTTGACTATTGGATAAAGAGATATTATATCTTCAGTATTAAATACT 180
consensus_10652#1      ------------------------------------------------------------
                                                                                   

consensus_10652#0      GGTTTTTGATGATGTTTAACACCATTCGGTAGATTGAGATTATACTCACGTAAAAGTAGC 240
consensus_10652#1      ------------------------------------------------------------
                                                                                   

consensus_10652#0      TGAATACCAACATATGTACAAAATGTTCTAAGAAGCTGAATACGTTGAACTTCATAACTT 300
consensus_10652#1      ------------------------------------------------------------
                                                                                   

consensus_10652#0      TTACAGAATTCATCAATGTCTGACGCAGTTATTTGATAATGATAATATTCCTTAGCTTCT 360
consensus_10652#1      ------------------------------------------------------------
                                                                                   

consensus_10652#0      TTAATTATTTCAGACCATAAACTGGAATGTGTTTCATTAAGCCATGCCATTTCTTCTGGT 420
consensus_10652#1      ------------------------------------------------------------
                                                                                   

consensus_10652#0      GATTCACGAAGATTTTTCAATTTCTTCTTATTTTTTTTATTACGATTCAGTTTGAGGACT 480
consensus_10652#1      ------------------------------------------------------------
                                                                                   

consensus_10652#0      TGCTCATCAATCCCAAGTAACGGTGTAAGATTAGGACAAGCTGTTAGAAAACAGTTGAGA 540
consensus_10652#1      ------------------------------------------------------------
                                                                                   

consensus_10652#0      AAATGAGCGACCCCAACAGAAAGAAGCATAGGATCAACATCTTGAAGATACGTTTTAAAT 600
consensus_10652#1      ------------------------------------------------------------
                                                                                   

consensus_10652#0      AAATGTTTCGCAGACCGTAACAAAACTTCGCAAATAGCCATTTTTTTCAGATAACCTAAC 660
consensus_10652#1      ------------------------------------------------------------
                                                                                   

consensus_10652#0      GACTGGTGAATACTGACTGACTCGATTACACGATTCAAATAACGTACATTAATGCCACGC 720
consensus_10652#1      ------------------------------------------------------------
                                                                                   

consensus_10652#0      TGATGCATTAACTCTATCAGGGCTCTACCATCTTGAGGAGTGATGCACAAACTTAACGCG 780
consensus_10652#1      ------------------------------------------------------------
                                                                                   

consensus_10652#0      TCTCTAACAAATGCTGGAATTTGTTTTAGAACCAAAAATTCACAAGCACTGCATACTAGT 840
consensus_10652#1      ------------------------------------------------------------
                                                                                   

consensus_10652#0      TCTTGGTCAACTGTTAATGATTGTTCCTCTGAATCACAAAATTTGACAAATTTCTGATAA 900
consensus_10652#1      ------------------------------------------------------------
                                                                                   

consensus_10652#0      ATATCAGGATTGAATGTAAGTTCAAAACGATCGGTACTCTGAGAACCGACAGCTTCTGCT 960
consensus_10652#1      ------------------------------------------------------------
                                                                                   

consensus_10652#0      GCTTTGCGGATAGCTTCTCGAATTACGTCATTTTTTTGTGTGTCTTGATCATCTTCCAGT 1020
consensus_10652#1      ------------------------------------------------------------
                                                                                   

consensus_10652#0      AATTTTTTCATCAGGGTTAAATCATCTGATTGATTCTTGCTTGGAGACTTGATTGTCCCA 1080
consensus_10652#1      ------------------------------------------------------------
                                                                                   

consensus_10652#0      ATCCCTGAGTTCAAAGCATTACTGGAGTGTCCAGTAACATCATGGTGATCTATTTGATGT 1140
consensus_10652#1      ------------------------------------------------------------
                                                                                   

consensus_10652#0      TTGGTTGTAACTAGACTATTTTTAGGAGACAATGGATCATCATTAGTGCTTGAACAGTTG 1200
consensus_10652#1      ------------------------------------------------------------
                                                                                   

consensus_10652#0      GCTTGTTTATTTTGCACACCAGTAGTATCCTGATCATCACGTTCACCTTTTGAGGATTTA 1260
consensus_10652#1      ------------------------------------------------------------
                                                                                   

consensus_10652#0      CTCTTCTGGATCTCTAGAGCAGTCAGACGTAGAAAAATTTCATAACGATGGTCAAAAAAC 1320
consensus_10652#1      ------------------------------------------------------------
                                                                                   

consensus_10652#0      GCCTCGATTAACTCTTGTCTTAAAGTCGCCAACATATGTCGATGTTGATAAGGATAACCT 1380
consensus_10652#1      ------------------------------------------------------------
                                                                                   

consensus_10652#0      AATTTCACCAATTCANGAGACAATTGAGGTCGTATATCACTACCATTATCTAAATAGTTT 1440
consensus_10652#1      ------------------------------------------------------------
                                                                                   

consensus_10652#0      AGATCTGGTGGGGAAGTACGTAATAAATCCAGAAATATAGTTCGATTATCATTCCCAAAC 1500
consensus_10652#1      ------------------------------------------------------------
                                                                                   

consensus_10652#0      ATCCCTTACATCCACAGATGAATATAACTGTATTGTATCACCTGAATGATTGACAACCTT 1560
consensus_10652#1      ------------------------------------------------------------
                                                                                   

consensus_10652#0      ATGTGGCTTGATTTTCAATTGTTTAGCTGTTTTAGACAATAGCTCTTCATAACGTTTATC 1620
consensus_10652#1      ------------------------------------------------------------
                                                                                   

consensus_10652#0      GGTGAGCACTGTCTTACCAAAATCGATTGAACCATAAACAACTAACTGTTCTTGTTCCTT 1680
consensus_10652#1      ------------------------------------------------------------
                                                                                   

consensus_10652#0      CTCCAAAATACCTGGTATGATTGTTTGAGCGGTAACACGAAAGCCACGGTAATCAATAAT 1740
consensus_10652#1      ------------------------------------------------------------
                                                                                   

consensus_10652#0      AGCTGTTCCAAGAGTATACAATCCAGGTTGATCTAGCATTGAATATGCACGTACTCCACA 1800
consensus_10652#1      ------------------------------------------------------------
                                                                                   

consensus_10652#0      CAAATCACTAGATGTAGCAGCATATGCGGCATATTCACCACCGAAATGCTTGTAATGATC 1860
consensus_10652#1      ------------------------------------------------------------
                                                                                   

consensus_10652#0      TTTAACGTCAAATCCAAGTGAGAAAAACATATTATTCCAGATAAACATTTGTTGTTTACG 1920
consensus_10652#1      ------------------------------------------------------------
                                                                                   

consensus_10652#0      TGTTTCTCCCGGGTTAATAGCCATAATATCTCCATTTACTACGCTAACTGCAGCACGAGT 1980
consensus_10652#1      ------------------------------------------------------------
                                                                                   

consensus_10652#0      TGCCGCAGCAACAAAATCACTGTTTGATTTGAAAATAGCACGGTCTCTAAGTAGCCGCTC 2040
consensus_10652#1      ------------------------------------------------------------
                                                                                   

consensus_10652#0      TGTAAGACGTGTCTGTGGAAGTTCACGCGTAACTTGTAGCTCTTCGTTCCAGTCCCTAGT 2100
consensus_10652#1      ------------------------------------------------------------
                                                                                   

consensus_10652#0      TTGACCGGGCAAATTTTCTTCGCACGCCATGCGAGAAGAAAACGCTTCTTCTTTTCTTAC 2160
consensus_10652#1      ------------------------------------------------------------
                                                                                   

consensus_10652#0      AGAATCTGGGGAATGTTCGACTAGCGGCGCTAACCANGAATGAACTTGATACGGAGTCGG 2220
consensus_10652#1      ------------------------------------------------------------
                                                                                   

consensus_10652#0      AACACGCTCAAATGGGTGTTTAGCAGCTCGATTTTTTAATAGAGACTCAAAATTGCGCTT 2280
consensus_10652#1      ------------------------------ATTTTTTAATAGAGACTCAAAATTGCGCTT 30
                                                     ******************************

consensus_10652#0      GAATCCTGGGCTAAGTTGACGCAGGAGATCGATCAGAGAATGTGCTACATAAGCATGTTG 2340
consensus_10652#1      GAATCCTGGGCTAAGTTGACGCAGGAGATCGATCAGAGAATGTGCTACATAAGCATGTTG 90
                       ************************************************************

consensus_10652#0      TATGGGGTGGGGATTAAACTGATCATCCGTGGACATATTTACATAAAATCCTCTGGGACA 2400
consensus_10652#1      TATGGGGTGGGGATTAAACTGATCATCCGTGGACATATTTACATAAAATCCTCTGGGACA 150
                       ************************************************************

consensus_10652#0      AGCAGTTATATGGTACTTTTTGTCTTCTAACGTGTGAAAAAATAAATAAATCAGATCTCC 2460
consensus_10652#1      AGCAGTTATATGGTACTTTTTGTCTTCTAACGTGTGAAAAAATAAATAAATCAGATCTCC 210
                       ************************************************************

consensus_10652#0      TAATAGTCGTCTTGCAGGTGGTGGAGGGTTCCAGTTACTATAATTTAATTGGCGAACGCA 2520
consensus_10652#1      TAATAGTCGTCTTGCAGGTGGTGGAGGGTTCCAGTTACTATAATTTAATTGGCGGA-GCA 269
                       ****************************************************** * ***

consensus_10652#0      TTTAACTGGCTTTCCGTCACGGTCCAAAGGATGTACAGGCAATAATGGGAGGTTGGTGTC 2580
consensus_10652#1      GCAG-------------------------------------------------------- 273
                                                                                   

consensus_10652#0      TG 2582
consensus_10652#1      --