These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10655#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1362 fasta sequence [CNAGGCCAANAATTTGGCACGAGGATCGAAGGAATTTTGGTATTCTATTCACAAGCTGTGGCCAAACTAATGGATTTGAAGGTGTTTGTTGATACAGACGCAGATGAACGCTTATCTCGTCGTCTTCGTCGTGATATTAGTGAACGTGGTAGAGAATTGAATAGCGTACTAGAACAATATATGCGCTTTGTCAAACCTTCCTATGAACAATTTATTGCTCCAAGCATGGCTCAAGCAGATATTATTGTTCCAAGAGGTGGAAAAAATGTTGTCGCTCTGCAACTTATCGTTCAACACATCAATAAACGTCTAAAACAGTGTGGACTACGAACCAGACATAAATTTGCCAAATTCCCATTCATACTTCCTAATGGTGCATTACCAACAGATTCTAACGATGCAACTTGGGAGGATAATAATTCAACTGGTGTAAATAATACAGTAGATGATGTTTTTACAATGAACAACCATCTGTACAATAACAAGCAATATACTACTAATGGTACATCTGATAAAGCATGTCTCCCACCTCGAGTTCATGTATTGCCTTCCACACCTCAAAGACTTGGTCTGCATACATTAATTCGTGATCAAAGCACCGATCAAGATGCATTTGTTTTCTATGCTGAACGTTTGATGCGTCCTTTATGTGAAGCTGCAATGAATCTACTTCCTCATATGGATA-AGATATCGAGACTCCTCAGGGTATCACTTATCGTGGTCGGGAATTAGCTACGGGCANTCAAGTATGTGGTGTATCTATTNTAATAGCAGGTGAAGTACTTGAACGGGCTCTATGCGCTGTGTGTANAGACATTCGTTTGGGCAAAATTNTGATACAAACCAATCCAGTCACATCTGAACCTGAATTACACTACATTCGTTTACCTCGAGATATTAAGGACTGTTTTGTTATACTCATGGATGCTACTGTGGCTACTGGAGCGGCTGCTATAATGGCTATGCGTATATTAGTGGAACATGATGTACCGGAAGATAAAATTATTCTCATCTCCTTAATAATGGCTAGTCAAGGTGTACATTCTGTTGCTTATACATATCCAAAGGCTCACATTGTAACTACTGCTGTAGATTCAGGCTTAAATGATAGTTATCACATTGTTCCAGGTGTTGGAAATTTCGGTGACCGCTATTTTGGTACTACTTTGGATCTAGAAACAAGATAACGAAATCTGATTGCTTCTTTTCTTCATAATATTCTGCAACACTTCTGCCAATCTGAGTGAATTACATAGTCAGGAGCCTTTTTGATTGGTTTTAGTCTGATTTTTAATTAATTCTTTCCTTTAAAAAGTTTTTATTTTGTTCTTCTGACAAACATTTTGTGGAAATTTGCTTTCA] [+] EMBL CD080831 [CNAGGCCAANAATTTGGCACGAGGATCGAAGGAATTTTGGTATTCTATTCACAAGCTGTGGCCAAACTAATGGATTTGAAGGTGTTTGTTGATACAGACGCAGATGAACGCTTATCTCGTCGTCTTCGTCGTGATATTAGTGAACGTGGTAGAGAATTGAATAGCGTACTAGAACAATATATGCGCTTTGTCAAACCTTCCTATGAACAATTTATTGCTCCAAGCATGGCTCAAGCAGATATTATTGTTCCAAGAGGTGGAAAAAATGTTGTCGCTCTGCAACTTATCGTTCAACACATCAATAAACGTCTAAAACAGTGTGGACTACGAACCAGACATAAATTTGCCAAATTCCCATTCATACTTCCTAATGGTGCATTACCAACAGATTCTAACGATGCAACTTGGGAGGATAATAATTCAACTGGTGTAAATAATACAGTAGATGATGTTTTTACAATGAACAACCATCTGTACAATAACAAGCAATATACTACTAATGGTACATCTGATAAAGCATGTCTCCCACCTCGAGTTCATGTATTGCCTTCCACACCTCAAAGACTTGGTCTGCATACATTAATTCGTGATCAAAGCACCGATCAAGATGCATTTGTTTTCTATGCTGAACGTTTGATGCGTCCTTTATGTGAAGCTGCAATGAATCTACTTCCTCATATGGATATAGATATCGAGACTCCTCAGGGTATCACTTATCGTGGTCGGG ] [+] EMBL CD179990 [ GACATAAATTTGCCAAATTCCCATTCATACTTCCTAATGGTGCATTGCCAACAGATTCTAACGATGCAACTTGGGAGGATAATAATTCAACTGGTGTAAATAATACAGTAGATGATGTTTTTACAATGAACAACCATCTGTACAATAACAAGCAATATACTACTAATGGTACATCTGATAAAGCATGTCTCCCACCTCGAGTTCATGTATTGCCTTCCACACCTCAAAGACTTGGTCTGCATACATTAATTCGTGATCAAAGCACCGATCAAGATGCATTTGTTTTCTATGCTGAACGTTTGATGCGTCCTTTATGTGAAGCTGCAATGAATCTACTTNCTCATAT GATATCGAGACTCCTC ] [-] EMBL CD194647 [ ACTTCTTCATATGGATA AGATATCGAGACTCCTCAGGGTATCAC TATCGTGGTCGGAAATTAGCTACGGGCANTCAAGTATGTGGTGTATCTATTNTAATAGCAGGTGAAGTACTTGAACGGGCTCTATGCGCTGTGTGTANAGACATTCGTTTGGGCAAAATTNTGATACAAACCAATCCAGTCACATCTGAACCTGAATTACACTACATTCGTTTACCTCGAGATATTAAGGACTGTTTTGTTATACTCATGGATGCTACTGTGGCTACTGGAGCGGCTGCTATAATGGCTATGCGTATATTAGTGGAACATGATGTACCGGAAGATAAAATTATTCTCATCTCCTTAATAATGGCTAGTCAAGGTGTACATTCTGTTGCTTATACATATCCAAAGGCTCACATTGTAACTACTGCTGTAGATTCAGGCTTAAATGATAGTTATCACATTGTTCCAGGTGTTGGAAATTTCGGTGACCGCTATTTTGGTACTACTTTGGATCTAGAAACAAGATAACGAAATCTGATTGCTTCTTTTCTTCATAATATTCTGCAACACTTCTGCCAATCTGAGTGAATTACATAGTCAGGAGCCTTTTTGATTGGTTTTAGTCTGATTTTTAATTAATTCTTTCCTTTAAAAAGTTTTTATTTTGTTCTTCTGACAAACATTTTGTGGAAATTTGCTTTCA] [+] EMBL CD066813 [ ATAATGGCTATGCGTATATTAGTGGAACATGATGTACCGGAAGATAAAATTATTCTCATCTCCTTAATAATGGCTAGTCAAGGTGTACATTCTGTTGCTTATACATATCCAAAGGCTCACATTGTAACTACTGCTGTAGATTCAGGCTTAAATGATAGTTATCACATTGTTCCAGGTGTTGGAAATTTCGGTGACCGCTATTTTGGTACTACTTTGGATCTAGAAACAAGATAACGAAATCTGATTGCTTCTTTTCTTCATAATATTCTGCAACACTTCTGCCAATCTGAGTGAATTACATAGTCAGGAGCCTTTTTGATTGGTTTTAGTCTGATTTTTAATTA ] consensusID : consensus_10655#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1233 fasta sequence [TCTNGCGCTTTGTGGAAAGACATCGTTGGGCAAAATTTTGATACAAACCAATCCAGTCACATCTGAACCTGAATTACACTACATTCGTTTACCTCTTTTTTTTTTTTTTTTTTTAAAAGATGTCAAAAAATGTATTTAAATATAAAGAAAGTTTAAAATTCTTGCTTACAAGCTCATTTTTAATTACACATTATTCAAAAGGTTTACATTTAGAGTATAATCAAAGCATCTCGTGATATTCTTCTTAATCAAAACTCAACATGGTTTAAACAGAAACCAGAAGATGGGTGTCCTCTTTAATAATAGTACCCATCGTTCGTATTCCTTGTATGGTAAATCTGAACCCTTGGGTATGTACGCGGAGAATATGAAAGTGTATTGCCATTATTGGAAATCGTGTCGGGATCTATCAGACGATTGTTAGATATCGAACGACGAAGTGGATACGGCGAATAGGTGCTTGGAACGTACGCATCCCCAACAGATGCGCGATATGATGGATAAACGGGCTGATAAGAAACGGGCTGAGCATAACTATGACGCTGATAACTATTTGGCATANGGC-CCGGATAAAGTGTTTCTGTAGGCTGGTAAACTGAAGGCGGACGAACGTAGTAGGACTCACGAGGCCTAGCATAATATGTTTCTACAGGCTGATATACAGAGGGCGGACGTGAGTAGAAGTCGTCATAATTTGGTTGATAGGGCCGAAATAGAAATATCTTATATCCAATAATCACGATATATGTTATGTGATTAAGTTTTCAAGAATGTGGTTTGCAGTTGAGTTACAATAAAAAGGATGAAATTGTTTTATCTCAAACTAAATAAAATGTATAGAGTAAATACAATTAGCGAAATCTGAAACTAAATGATTAAAGTGAAAACGTCATCAAACAGCGGCACTGAAAAAACTGTTGAATGGAAAAAATAAAATATATTTGCCATAAATATTTGTTATTCTGGCCTTCTAAATGGAAGTTAGGGGAATTCGTGACAATTATTTACAATATTTTGTTATTTTTTCCATTTGAAAACATTTAAGCTCGTACCGAAAAAACTTACCTTGAGTGTCTTGATCCCCGATAATTATAGCGATAGTCATCCCTAATCCGATCATCCAAAGTTCTAGGATGTAAATAACCTGGAGTTGTATGACTTCTCCGACGACATGACATTTGTAGCACCTGTCAGAAATAGTACCACCTCGTGCCGAATTNTTGGCTCGGAGGG] [-] EMBL AA999339 [TCTNGCGCTTTGTGGAAAGACATCGTTGGGCAAAATTTTGATACAAACCAATCCAGTCACATCTGAACCTGAATTACACTACATTCGTTTACCTCGAGTTTTTTTTTTTTTTTTTAAAGATGTCAAAAAATGTATTTAAATATAAAGAAAGTTTAAAATTCTTGCTTACAAGCTCATTTTTAATAACACATTATTCAAAAGGTTTACATTTAGAGTATAATCAAAGCATCTCGTGATATTCTTCTTAATCAAAACTCAACATGGTTTGAACAGAAACCAGAAGATGGGTGTCCTCTTTAATAATAGTACCCATCGTTCGTATTCCTTGTATGGTAAATCTGAACCCTTGGGTATGTACGCGGAGAATATGAAAGTGTATTGCCATTATTGGAAATCGTGTCGGGATCTATCAGACGATTGTTAGATATCGAACGACGAAGTGGATACGGCGAATAGGTGCTTGGAACGTACGCATCCCCAACAGATGCGCGATATGATGGATAAACGGGCTGAT ] [+] EMBL AI395708 [ ttttttTTTTTTTTTTTTGTTTTTTAAAAGATGTCAAAAAATGTATTTAAATATAAAGAAAGTTTAAAATTCTTGCTTACAAGCTCATTTTTAATTACACATTATTCAAAAGGTTTACATTTAGAGTATAATCAAAGCATCTCGTGATATTCTTCTTAATCAAAACTCAACATGGTTTAAACAGAAACCAGAAGATGGGTGTCCTCTTTAATAATAGTACCCATCGTTCGTATTCCTTGTATGGTAAATCTGAACCCTTGGGTATGTACGCGGAGAATATGAAAGTGTATTGCCATTATTGGAAATCGTGTCGGGATCTATCAGACGATTGTTAGATATCGAACGACGAAGTGGATACGGCGAATAGGTGCTTGGAACGTACGCATCCCCAACAGATGCGCGATATGATGGATAAACGGGCTGATAAGAAACGGGCTGAGCATAACTATGACGCTGATAACTATTTGGCATANNGC CC ] [+] EMBL AI395786 [ TTTTTTTTTTTTTTTTTTTAAAAGATGTCAAAAAATGTATTTAAATATAAAGAAAGTTTAAAATTCTTGCTTACAAGCTCATTTTTAATTACACATTATTCAAAAGGTTTACATTTAGAGTATAATCAAAGCATCTCGTGATATTCTTCTTAATCAAAACTCAACATGGTTTAAACAGAAACCAGAAGATGGGTGTCCTCTTTAATAATAGTACCCATCGTTCGTATTCCTTGTATGGTAAATCTGAACCCTTGGGTATGTACGCGGAGAATATGAAAGTGTATTGCCATTATTGGAAATCGTGTCGGGATCTATCAGACGATTGTTAGATATCGAACGACGAAGTGGATACAGCGAATAAGTGCTTGGGACGTACGCAT CCCAAGAGATGCGC ] [+] EMBL AI395495 [ TTTTTTTTTTTTTTTTTAAAAAGATGTCAAAAAATGTATTTAAATATAAAGAAAGTTTAAAATTCTTGCTTACAAGCTCATTTTTAATTACACATTATTCAAAAGGTTTACATTTAGAGTATAATCAAAGCATCTCGTGATATTCTTCTTAATCAAAACTCAACATGGTTTAAACAGAAACCAGAAGATGGGTGTCCTCTTTAATAATAGTACCCATCGTTCGTATTCCTTGTATGGTAAATCTGAACCCTTGGGTATGTACGCGGAGAATATGAAAGTGTATTGCCATTATTGGAAATCGTGTCGGGATCTATCAGACGATTGTTAGATATCGAACGACGAAGTGGATACGGCGAATAGGTGCTTGGAACGTACGCACCCCCAACAGATGCGCGATATGATGGGAAAACGGGCTGga ] [+] EMBL CD075609 [ AAGCTCATTTTTAATTACACATTATTCAAAAGGTTTACATTTAGAGTATAATCAAAGCATCTCGTGATATTCTTCTTAATCAAAACTCAACATGGTTTAAACAGAAACCAGAAGATGGGTGTCCTCTTTAATAATAGTACCCATCGTTCGTATTCCTTGTATGGTAAATCTGAACCCTTGGGTATGTACGCGGAGAATATGAAAGTGTATTGCCATTATTGGAAATCGTGTCGGGATCTATCAGACGATTGTTAGATATCGAACGACGAAGTGGATACGGCGAATAGGTGCTTGGAACGTACGCATCCCCAACAGATGCGCGATATGATGGATAAACGGGCTGATAAAAAACGGGCTGAGCATAACTATGACGCTGATAACTATTTGGCATAGGCC CCGGATAAAGTGTTTCTGTAGGCTGGTAAACTGAAGGCGGACGAACGTAGTAGGACTCACGAGGCCTAGCATAATATGTTTCTACAGGCTGATATACAGAGGGCGGACGTGAGTAGAAGTCGTCATAATTTGGTTGATAGGGCCGAAATAGAAATATCTTA ] [-] EMBL CD081997 [ GAAACGGGCTGAGCATAACTATGACGCTGATAACTATTTGGCATA GGCNCCGGATANAGTGTTTCTGTAGGCTGGTAAACTGAAGGCGGACGAACGTAGTAGGACTCACGAGGCCTAGCATAATATGTTTCTACAGGCTGATATACAGAGGGCGGACGTGAGTAGAAGTCGTCATAATTTGGTTGATAGGGCCGAAATAGAAATATCTTATATCCAATAATCACGATATATGTTATGTGATTAAGTTTTCAAGAATGTGGTTTGCAGTTGAGTTACAATAAAAAGGATGAAATTGTTTTATCTCAAACTAAATAAAATGTATAGAGTAAATACAATTAGCGAAATCTGAAACTAAATGATTAAAGTGAAAACGTCATCAAACAGCGGCACTGAAAAAACTGTTGAATGGAAAAAATAAAATATATTTGCCATAAATATTTGTTATTCTGGCCTTCTAAATGGAAGTTAGGGGAATTCGTGACAATTATTTACAATATTTTGTTATTTTTTCCATTTGAAAACATTTAAGCTCGTACCGAAAAAACTTACCTTGAGTGTCTTGATCCCCGATAATTATAGCGATAGTCATCCCTAATCCGATCATCCAAAGTTCTAGGATGTAAATAACCTGGAGTTGTATGACTTCTCCGACGACATGACATTTGTAGCACCTGTCAGAAATAGTACCACCTCGTGCCGAATTNTTGGCTCGGAGGG] consensusID : consensus_10655#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 727 fasta sequence [GGACAAACTCAACAGCCTTTTGTAATCGGTATATGTGGAGGTAGTGCAAGCGGTAAAACATCTGTTGCCCGCGTAATTATTGAAAGTCTGGATGTACAGTGGGTCAGTTTATTAAGTTTGGACTCATACTACAAGGTTCTTACTCCAGAGCAAAAACTTCAAGCTGTTGCTTGTCATTATAATTTCGATCATCCAAGCGCTTTTGATCTTGATTTATTAGAAAATCATTTACGTAGGTTACGCGACGGTAAAACAATTGAAGTACCTGAATATGATTTCAAAACTCATTCTCGTACTTCTAAGACGAATACTGTCTACGGGGCTAATATTATTATCATTGAAGGAATTTTGGTATTCTATTCACAAGCTGTGGCCAAACTAATGGATTTGAAGGTGTTTGTTGATACAGACGCAGATGAACGCTTATCTCGTCGTCTTCGTCGTGATATTAGTGAACGTGGTAGAGAATTGAATAGCGTACTAGAACAATATATGCGCTTTGTCAAACCTTCCTATGAACAATTTATTGCTCCAAGCATGGCTCAAGCAGATATTATTGTTCCAAGAGGTGGAAAAAATGTTGTCGCTCTGCAACTTATCGTTCAACACATCAATAAACGTCTAAAACAGTGTGGACTACGAACCAGACATAAATTTGCCAAATTCCCATTCATACTTCCTAATGGTGCATTACCAACAGATTCTAACGATGCAACTTGGGAGGATA] [+] EMBL CD097112 [GGACAAACTCAACAGCCTTTTGTAATCGGTATATGTGGAGGTAGTGCAAGCGGTAAAACATCTGTTGCCCGCGTAATTATTGAAAGTCTGGATGTACAGTGGGTCAGTTTATTAAGTTTGGACTCATACTACAAGGTTCTTACTCCAGAGCAAAAACTTCAAGCTGTTGCTTGTCATTATAACTTCGATCATCCAAGCGCTTTTGATCTTGATTTATTAGAAAATCATTTACGTAGGTTACGCGACGGTAAAACAATTGAAGTACCTGAATATGATTTCAAAACTCATTCTCGTACT ] [-] EMBL CD097061 [ GACAAACTCAACAGCCTTTTGTAATCGGTATATGTGGAGGTAGTGCAAGCGGTAAAACATCTGTTGCCCGCGTAATTATTGAAAGTCTGGATGTACAGTGGGTCAGTTTATTAAGTTTGGACTCATACTACAAGGTTCTTACTCCAGAGCAAAAACTTCAAGCTGTTGCTTGTCATTATAATTTCGATCATCCAAGCGCTTTTGATCTTGATTTATTAGAAAATCATTTACGTAGGTTACGCGACGGTAAAACAATTGAAGTACCTGAATATGATTTCAAAACTCATTCTCGTACTT ] [-] EMBL CD097103 [ GACAAACTCAACAGCCTTTTGTAATCGGTATATGTGGAGGTAGTGCAAGCGGTAAAACATCTGTTGCCCGCGTAATTATTGAAAGTCTGGATGTACAGTGGGTCAGTTTATTAAGTTTGGACTCATACTACAAGGTTCTTACTCCAGAGCAAAAACTTCAAGCTGTTGCTTGTCATTATAATTTCGATCATCCAAGCGCTTTTGATCTTGATTTATTAGAAAATCATTTACGTAGGTTACGCGACGGTAAAACAATTGAAGTACCTGAATATGATTTCAAAACTCATTCTCGTACTT ] [-] EMBL CD163049 [ AATTGAAGTACCTGAATATGATTTCAAAACTCATTCTCGTACTTCTAAGACGAATACTGTCTACGGGGCTAATATTATTATCATTGAAGGAATTTTGGTATTCTATTCACAAGCTGTGGCCAAACTAATGGATTTGAAGGTGTTTGTTGATACAGACGCAGATGAACGCTTATCTCGTCGTCTTCGTCGTGATATTAGTGAACGTGGTAGAGAATTGAATAGCGTACTAGAACAATATATGCGCTTTGTCAAACCTTCCTATGAACAATTTATTGCTCCAAGCATGGCTCAAGCAGATATTATTGTTCCAAGAGGTGGAAAAAATGTTGTCGCTCTGCAACTTATCGTTCAACACATCAATAAACGTCTAAAACAGTGTGGACTACGAACCAGACATAAATTTGCCAAATTCCCATTCATACTTCCTAATGGTGCATTACCAACAGATTCTAACGATGCAACTTGGGAGGATA] [+] EMBL CD202195 [ AATTTTGGTATTCTATTCACAAGCTGTGGCCAAACTAATGGATTTGAAGGTGTTTGTTGATACAGACGCAGATGAACGCTTATCTCGTCGTCTTCGTCGTGATATTAGTGAACGTGGTAGAGAATTGAATAGCGTACTAGAACAATATATGCGCTTTGTCAAACCTTCCTATGAACAATTTATTGCTCCAAGCATGGCTCAAGCAGATATTATTGTTCCAAGAGGTGGAAAAAATGTTGTCGCTCTGCAACTTATCGTTCAACACATCAATAAACGTCTAAAACAGTGTGGACTACGAACCAGACATAAATTTGCCAAATTCCCATTCATACTTCCTAAT ] consensusID : consensus_10655#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 514 fasta sequence [ACGAGGACTATTTCTGACAGGTGCTACAAATGTCATGTCGTCGGAGAAGTCATACAACTCCAGGTTATTTACATCCTAGAACTTTGGATGATCGGATTAGGGATGACTATCGCTATAATTATCGGGGATCAAGACACTCAAGGCCCTATCAACCAAATTATGACGACTTCTACTCACGTCCGCCCTCTGTATATCAGCCTGTAGAAACATATTATGCTAGGCCTCGTGAGTCCTACTACGTTCGTCCGCCTTCAGTTTACCAGCCTACAGAAACACTTTATCCGGGGCCTATGCCAAATAGTTATCAGCGTCATAGTTATGCTCAGCCCGTTTCTTATCAGCCCGTTTATCCATCATATCGCGCATCTGTTGGGGATGCGTACGTTCCAAGCACCTATTCGCCGTATCCACTTCGTCGTTCGATATCTAACAATCGTCTGATAGATCCCGACACGATTTCCAATAATGGCAATACACTTTCATATTCTCCGCGTACATACCCAAGGGTTCAGAT] [+] EMBL CD083518 [ACGAGGACTATTTCTGACAGGTGCTACAAATGTCATGTCGTCGGAGAAGTCATACAACTCCAGGTTATTTACATCCTAGAACTTTGGATGATCGGATTAGGGATGACTATCGCTATAATTATCGGGGATCAAGACACTCAAGGCCCTATCAACCAAATTATGACGACTTCTACTCACGTCCGCCCTCTGTATATCAGCCTGTAGAAACATATTATGCTAGGCCTCGTGAGTCCTACTACGTTCGTCCGCCTTCAGTTTACCAGCCTACAGAAACACTTTATCCGGGGCCTATGCCAAATAGTTATCAGCGTCATAGTTATGCTCAGCCCGTTTCTTATCAGCCCGTTTATCCATCATATCGCGCATCTGTTGGGGATGCGTACGTTCCAAGCACCTATTCGCCGTATCCACTTCGTCGTTCGATATCTAACAATCGTCTGATAGATCCCGACACGATTTCCAATAATGGCAATACACTTTCATATTCTCCGCGTACATACCCAAGGGTTCAGAT] [+] EMBL AA559582 [ ATCCTAAAACTTTGGATGATCGGATTAGGGACNACTATCGCTATAATTATCGGGGATCAAGACACTCAAGGCCCTATCAACCAAATTATGACNACTTCTACTCACGTCCGCCCTCTGTATATCAACCTGTANAAACATATTATGCTAGGCCTCGTGAGTCCTACTACGTTCGTCCGCCTTCAGTTTACCAGCCTACAGAAACACTTTATCCGGGGCCTATGCCAAATAGTTATCAGCGTCATAGTTATGCTCAGCCCGTTTCTTATCAGCCCGTTTATCCATCATATCGCGCATCTGTTGGGGATGCNTAC ] consensusID : consensus_10655#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 477 fasta sequence [CATGTATTCGTGGTACTATTTNTGACAGGTGCTACAAATGTGATGTCGGCGNAGAAGTCATACAACTCCAGGTTATTTACATNCTACAACTTTGGATGATCGGATTANGGATGACTATNGNTATAATTATNGGGGATCAANACACTCNAGGCCCTATCAACCAAATTATGACNACTTCTACTCACNTCCGCCCTNTGTATATCAGNCTGNANAAACATATTATGCTAGGTCACATATTTTGTGTATTTNTGATGCCTNNGGAGTNCTACTACGTTCGNCCGCCTTCAGTTTACCAGCCTANANAAACACTTTATNCGGGGCCTATGCCAAATANTTATCAGCGTCATAGTTATGCTCANCCCGTTTNTTATCANCCCGTTTATCCATNATATCNNGCATCTGNGGGGGATGCGTACGTTCCAAGCACCTATTCGCCGTATCCACTTCGTCGNTCGATATCTAACAATCGNCTGATAG] [+] EMBL BE449145 [CATGTATTCGTGGTACTATTTNTGACAGGTGCTACAAATGTGATGTCGGCGNAGAAGTCATACAACTCCAGGTTATTTACATNCTACAACTTTGGATGATCGGATTANGGATGACTATNGNTATAATTATNGGGGATCAANACACTCNAGGCCCTATCAACCAAATTATGACNACTTCTACTCACNTCCGCCCTNTGTATATCAGNCTGNANAAACATATTATGCTAGGTCACATATTTTGTGTATTTNTGATGCCTNNGGAGTNCTACTACGTTCGNCCGCCTTCAGTTTACCAGCCTANANAAACACTTTATNCGGGGCCTATGCCAAATANTTATCAGCGTCATAGTTATGCTCANCCCGTTTNTTATCANCCCGTTTATCCATNATATCNNGCATCTGNGGGGGATGCGTACGTTCCAAGCACCTATTCGCCGTATCCACTTCGTCGNTCGATATCTAACAATCGNCTGATAG] consensusID : consensus_10655#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 464 fasta sequence [TATGAAAGTGTATTGCCATTATTGGAAATCGTGTCGGGATCTATCAGACGATTGTTAGATATCGAACGACGAAGTGGATACGGCGAATAGGTGCTTGGAACGTACGCATCCCCAACAGATGCGCGATATGATGGATAAACGGGCTGATAAGAAACGGGCTGAGCATAACTATGACGCTGATAACTATTTGGCATAGGCCCCGGATAAAGTGTTTCTGTAGGCTGGTAAACTGAAGGCGGACGAACGTAGTANGACTCACGAGGCATCAGAAATACACAAAATATGTGACCTAGCATAATATGTTTCTACAGGCTGATATACAGAGGGCGGACGTGAGTANAAGTCGTNATAATTTGGTTGATAGGGCCTTGAGTGTCTTGATCCCCGATAATTATAGCGATAGTCATNCCTAATCCGATCATCCAAAGTTCTAGGATGTAAATAACCTGGAAGTTGTATGACTT] [+] EMBL BE431319 [TATGAAAGTGTATTGCCATTATTGGAAATCGTGTCGGGATCTATCAGACGATTGTTAGATATCGAACGACGAAGTGGATACGGCGAATAGGTGCTTGGAACGTACGCATCCCCAACAGATGCGCGATATGATGGATAAACGGGCTGATAAGAAACGGGCTGAGCATAACTATGACGCTGATAACTATTTGGCATAGGCCCCGGATAAAGTGTTTCTGTAGGCTGGTAAACTGAAGGCGGACGAACGTAGTANGACTCACGAGGCATCAGAAATACACAAAATATGTGACCTAGCATAATATGTTTCTACAGGCTGATATACAGAGGGCGGACGTGAGTANAAGTCGTNATAATTTGGTTGATAGGGCCTTGAGTGTCTTGATCCCCGATAATTATAGCGATAGTCATNCCTAATCCGATCATCCAAAGTTCTAGGATGTAAATAACCTGGAAGTTGTATGACTT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10655#0 ------------------------------------------------------------ consensus_10655#2 ----------------------------GGACAAACTCAACAGCCTTTTGTAATCGGTAT 32 consensus_10655#3 ------------------------------------------------------------ consensus_10655#4 ------------------------------------------------------------ consensus_10655#1 TCTNGCGCTTTGTGGAAAGACATCGTTGGGCAAAATTTTGATACAAACCAATCCAGTCAC 60 consensus_10655#5 ------------------------------------------------------------ consensus_10655#0 ------------------------------------------------------------ consensus_10655#2 ATGTGGAGGTAGTGCAAGCGGTAAAACATCTGTTGCCCGCGTAATTATTGAAAGTCTGGA 92 consensus_10655#3 ------------------------------------------------------------ consensus_10655#4 ------------------------------------------------------------ consensus_10655#1 ATCTGAACCTGAATTACACTACATTCGTTTACCTCTTTTTTTTTTTTTTTTTTTAAAAGA 120 consensus_10655#5 ------------------------------------------------------------ consensus_10655#0 ------------------------------------------------------------ consensus_10655#2 TGTACAGTGGGTCAGTTTATTAAGTTTGGACTCATACTACAAGGTTCTTACTCCAGAGCA 152 consensus_10655#3 ------------------------------------------------------------ consensus_10655#4 ------------------------------------------------------------ consensus_10655#1 TGTCAAAAAATGTATTTAAATATAAAGAAAGTTTAAAATTCTTGCTTACAAGCTCATTTT 180 consensus_10655#5 ------------------------------------------------------------ consensus_10655#0 ------------------------------------------------------------ consensus_10655#2 AAAACTTCAAGCTGTTGCTTGTCATTATAATTTCGATCATCCAAGCGCTTTTGATCTTGA 212 consensus_10655#3 ------------------------------------------------------------ consensus_10655#4 ------------------------------------------------------------ consensus_10655#1 TAATTACACATTATTCAAAAGGTTTACATTTAGAGTATAATCAAAGCATCTCGTGATATT 240 consensus_10655#5 ------------------------------------------------------------ consensus_10655#0 ------------------------------------------------------------ consensus_10655#2 TTTATTAGAAAATCATTTACGTAGGTTACGCGACGGTAAAACAATTGAAGTACCTGAATA 272 consensus_10655#3 ------------------------------------------------------------ consensus_10655#4 ------------------------------------------------------------ consensus_10655#1 CTTCTTAATCAAAACTCAACATGGTTTAAACAGAAACCAGAAGATGGGTGTCCTCTTTAA 300 consensus_10655#5 ------------------------------------------------------------ consensus_10655#0 ------------------------------------------CNAGGCCA-ANAATTTGG 17 consensus_10655#2 TGATTTCAAAACTCATTCTCGTACTTCTAAGACGAATACTGTCTACGGGG-CTAATAT-- 329 consensus_10655#3 --------------------------------------------ACGAGG-ACTATTTCT 15 consensus_10655#4 -------------------------------------CATGTATTCGTGGTACTATTTNT 23 consensus_10655#1 TAATAGTACCCATCGTTCGTATTCCTTGTATGGTAAATCTGAACCCTTGGGTATGTACGC 360 consensus_10655#5 ------------------------------------------------------------ consensus_10655#0 CACGAGGATCGAAGGAATTTTGGTATT-CTATTCACAAGCTGTGGCCAAACTAATGG-AT 75 consensus_10655#2 TATTATCATTGAAGGAATTTTGGTATT-CTATTCACAAGCTGTGGCCAAACTAATGG-AT 387 consensus_10655#3 GACAGGTGCTACAAATGTCATGTCGTC-GGAGAAGTCATACAACTCCAGGTTATTTACAT 74 consensus_10655#4 GACAGGTGCTACAAATGTGATGTCGGC-GNAGAAGTCATACAACTCCAGGTTATTTACAT 82 consensus_10655#1 GGAGAATA-TGAAAGTGTATTGCCATTATTGGAAATCGTGTCGGGATCTATCAGACG-AT 418 consensus_10655#5 ------TA-TGAAAGTGTATTGCCATTATTGGAAATCGTGTCGGGATCTATCAGACG-AT 52 * * ** * ** consensus_10655#0 TTGAAGGTGTTTGTTGATACAGACGCAGATGAACGCTTATCTCGTCGTCTTCG-TCGTGA 134 consensus_10655#2 TTGAAGGTGTTTGTTGATACAGACGCAGATGAACGCTTATCTCGTCGTCTTCG-TCGTGA 446 consensus_10655#3 CCTAGAACTTTGGATGATCGGATTAGGGATGACTATCGCTATAATTATCGGGGATCAAGA 134 consensus_10655#4 NCTACAACTTTGGATGATCGGATTANGGATGACTATNGNTATAATTATNGGGGATCAANA 142 consensus_10655#1 TGTTAGATATCGAACGAC-GAAGTGGATACGG-CGAATAGGTGCTTG-GAACGTACGCAT 475 consensus_10655#5 TGTTAGATATCGAACGAC-GAAGTGGATACGG-CGAATAGGTGCTTG-GAACGTACGCAT 109 * ** * * * * * * consensus_10655#0 TATTAGTGAACGTGGTAGAGAATTGAATAGCGTACTAGAACAATATATGCGCTTTGTCAA 194 consensus_10655#2 TATTAGTGAACGTGGTAGAGAATTGAATAGCGTACTAGAACAATATATGCGCTTTGTCAA 506 consensus_10655#3 CACTCAAGGCCCTATCAACCAAATTA-TGACGACTTCTACTCACGTCCGCCCTCTGT-AT 192 consensus_10655#4 CACTCNAGGCCCTATCAACCAAATTA-TGACNACTTCTACTCACNTCCGCCCTNTGT-AT 200 consensus_10655#1 CCCCAACAGATGCGCGATATGATGGATAAACGGGCT--GATAAGAAACGGGCTGAGCATA 533 consensus_10655#5 CCCCAACAGATGCGCGATATGATGGATAAACGGGCT--GATAAGAAACGGGCTGAGCATA 167 * * * * * * * ** * consensus_10655#0 ACCTTCCTATGAACAATTTATTGCTCCAAG-CATGGCTCAAGCAGATATTATTGTTCCAA 253 consensus_10655#2 ACCTTCCTATGAACAATTTATTGCTCCAAG-CATGGCTCAAGCAGATATTATTGTTCCAA 565 consensus_10655#3 ATCAGCCTGTAGA-AACATATTATGCTAGG-------------------------CCTCG 226 consensus_10655#4 ATCAGNCTGNANA-AACATATTATGCTAGGTCACATATTTTGTGTATTTNTGATGCCTNN 259 consensus_10655#1 ACTATGACGCTGATAACTATTTGGCATANGGCCCGGATAAAGTG--TTTCTGTAGGCTGG 591 consensus_10655#5 ACTATGACGCTGATAACTATTTGGCATAGGCCCCGGATAAAGTG--TTTCTGTAGGCTGG 225 * * ** ** * * * consensus_10655#0 GAGGTGGAAAAAATGTTGTCGCTCTGCAACTTATCGTTCAACACATCAA----------- 302 consensus_10655#2 GAGGTGGAAAAAATGTTGTCGCTCTGCAACTTATCGTTCAACACATCAA----------- 614 consensus_10655#3 TGAGTCCTACTACGTTCGTCCGCCTTCAGTTTACCAGCCTACAGAAACA----------- 275 consensus_10655#4 GGAGTNCTACTACGTTCGNCCGCCTTCAGTTTACCAGCCTANANAAACA----------- 308 consensus_10655#1 TAAACTGAAGGCGGACGAACGTAGTAGGACTCACGAGGC--------------------- 630 consensus_10655#5 TAAACTGAAGGCGGACGAACGTAGTANGACTCACGAGGCATCAGAAATACACAAAATATG 285 * * * * * * consensus_10655#0 ----T-AAACGTCTAAAACAGTGTGGACTACGAACCAGA---CATAAATTTGCCAAATTC 354 consensus_10655#2 ----T-AAACGTCTAAAACAGTGTGGACTACGAACCAGA---CATAAATTTGCCAAATTC 666 consensus_10655#3 ----C-TTTATCCGGGGCCTATGCCAAATAGTTATCAGCGT-CATAGTTATGCTCAGCCC 329 consensus_10655#4 ----C-TTTATNCGGGGCCTATGCCAAATANTTATCAGCGT-CATAGTTATGCTCANCCC 362 consensus_10655#1 ----CTAGCATAATATGTTTCTACAGGCTGATATACAGAGGGCGGACGTGAGTAGAAGTC 686 consensus_10655#5 TGACCTAGCATAATATGTTTCTACAGGCTGATATACAGAGGGCGGACGTGAGTANAAGTC 345 * * *** * * * * * * consensus_10655#0 CCATTCATACTTCCTAATGGTGCATTACCAACAGATTCTAACGATGCAACTTGGGAGGAT 414 consensus_10655#2 CCATTCATACTTCCTAATGGTGCATTACCAACAGATTCTAACGATGCAACTTGGGAGGAT 726 consensus_10655#3 GTTTCTTATCAGCCCGTTTATCCATCATATCGCGCATCTGTTGGGGATGCGTACGTTC-C 388 consensus_10655#4 GTTTNTTATCANCCCGTTTATCCATNATATCNNGCATCTGNGGGGGATGCGTACGTTC-C 421 consensus_10655#1 GTCATAATTTGGTTGATAGGGCCGAAATAGAAATATCTTATATCCAATAATCACGATATA 746 consensus_10655#5 GTNATAATTTGGTTGATAGGGCC----TTGAGTGTCTTGATCCCCGATAATTATAGCGAT 401 * consensus_10655#0 AATAATTCAACTGGTGTAAATAATACAGTAGATGATGTTTTTACAATGAACAACCATCTG 474 consensus_10655#2 A----------------------------------------------------------- 727 consensus_10655#3 AAGCACCTATTCGCCGTATCCACTTCGTCGTTCGATATCTAACAATCGTCTGATAGATCC 448 consensus_10655#4 AAGCACCTATTCGCCGTATCCACTTCGTCGNTCGATATCTAACAATCGNCTGATAG---- 477 consensus_10655#1 TGTTATG----TGATTAAGTT-TTCAAGAATGTGGTTTGCAGTTGAGTTACAATAAAAAG 801 consensus_10655#5 AGTCATNC--CTAATCCGATCATCCAAAGTTCTAGGATGTAAATAACCTGGAAGTTGTAT 459 consensus_10655#0 TACAATAACAAGCAATATACTACTAATGGTACATCTGATAAAGCATGTCTCCCACCTCGA 534 consensus_10655#2 ------------------------------------------------------------ consensus_10655#3 CGACACGATTTCCAATA--ATGGCAATACACTTTCATATTCTCCGCGTACATACCCAAGG 506 consensus_10655#4 ------------------------------------------------------------ consensus_10655#1 GATGAAATTGTTTTATCTCAAACTAAATAAAATGTATAGAGTAAATACAATTAGC---GA 858 consensus_10655#5 GACTT------------------------------------------------------- 464 consensus_10655#0 GTTCATGTATTGCCTTCCACACCTCAAAGACTTGGTCTGCATACATTAATTCGTGATCAA 594 consensus_10655#2 ------------------------------------------------------------ consensus_10655#3 GTTCAGAT---------------------------------------------------- 514 consensus_10655#4 ------------------------------------------------------------ consensus_10655#1 AATCTGAAACTAAATGATTAAAGTGAAAACGTCATCAAACAGCGGCACTGAAAAAACTGT 918 consensus_10655#5 ------------------------------------------------------------ consensus_10655#0 AGCACCGATCAAGATGCATTTGTTTTCTATGCTGAACGTTTGATGCGTCCTTTATGTGAA 654 consensus_10655#2 ------------------------------------------------------------ consensus_10655#3 ------------------------------------------------------------ consensus_10655#4 ------------------------------------------------------------ consensus_10655#1 TGAATGGAAAAAATAAAATATATTTGCCATAAATATTTGTTATTCTGGCCTTCTAAATGG 978 consensus_10655#5 ------------------------------------------------------------ consensus_10655#0 GCTGCAATGAATCTACTTCCTCATATGGATAAGATATCGAGACTCCTCAGGGTATCACTT 714 consensus_10655#2 ------------------------------------------------------------ consensus_10655#3 ------------------------------------------------------------ consensus_10655#4 ------------------------------------------------------------ consensus_10655#1 AAGTTAGGGGAATTCGTGACAATTATTTACAATATTTTGTTATTTTTTCCATTTGAAAAC 1038 consensus_10655#5 ------------------------------------------------------------ consensus_10655#0 ATCGTGGTCGGGAATTAGCTACGGGCANTCAAGTATGTGGTGTATCTATTNTAATAGCAG 774 consensus_10655#2 ------------------------------------------------------------ consensus_10655#3 ------------------------------------------------------------ consensus_10655#4 ------------------------------------------------------------ consensus_10655#1 ATTTAAGCTCGTACCGAAAAAACTTACCTTGAGTGTCTTGATCCCCGATAATTATAGCGA 1098 consensus_10655#5 ------------------------------------------------------------ consensus_10655#0 GTGAAGTACTTGAACGGGCTCTATGCGCTGTGTGTANAGACATTCGTTTGGGCAAAATTN 834 consensus_10655#2 ------------------------------------------------------------ consensus_10655#3 ------------------------------------------------------------ consensus_10655#4 ------------------------------------------------------------ consensus_10655#1 TAGTCATCCCTAATCCGATCATCCAAAGTTCTAGGATGTAAATAACCTGGAGTTGTATGA 1158 consensus_10655#5 ------------------------------------------------------------ consensus_10655#0 TGATACAAACCAATCCAGTCACATCTGAACCTGAATTACACTACATTCGTTTACCTCGAG 894 consensus_10655#2 ------------------------------------------------------------ consensus_10655#3 ------------------------------------------------------------ consensus_10655#4 ------------------------------------------------------------ consensus_10655#1 CTTCTCCGACGACATGACATTTGTAGCACCTGTCAGAAATAGTACCACCTCGTGCCGAAT 1218 consensus_10655#5 ------------------------------------------------------------ consensus_10655#0 ATATTAAGGACTGTTTTGTTATACTCATGGATGCTACTGTGGCTACTGGAGCGGCTGCTA 954 consensus_10655#2 ------------------------------------------------------------ consensus_10655#3 ------------------------------------------------------------ consensus_10655#4 ------------------------------------------------------------ consensus_10655#1 TNTTGGCTCGGAGGG--------------------------------------------- 1233 consensus_10655#5 ------------------------------------------------------------ consensus_10655#0 TAATGGCTATGCGTATATTAGTGGAACATGATGTACCGGAAGATAAAATTATTCTCATCT 1014 consensus_10655#2 ------------------------------------------------------------ consensus_10655#3 ------------------------------------------------------------ consensus_10655#4 ------------------------------------------------------------ consensus_10655#1 ------------------------------------------------------------ consensus_10655#5 ------------------------------------------------------------ consensus_10655#0 CCTTAATAATGGCTAGTCAAGGTGTACATTCTGTTGCTTATACATATCCAAAGGCTCACA 1074 consensus_10655#2 ------------------------------------------------------------ consensus_10655#3 ------------------------------------------------------------ consensus_10655#4 ------------------------------------------------------------ consensus_10655#1 ------------------------------------------------------------ consensus_10655#5 ------------------------------------------------------------ consensus_10655#0 TTGTAACTACTGCTGTAGATTCAGGCTTAAATGATAGTTATCACATTGTTCCAGGTGTTG 1134 consensus_10655#2 ------------------------------------------------------------ consensus_10655#3 ------------------------------------------------------------ consensus_10655#4 ------------------------------------------------------------ consensus_10655#1 ------------------------------------------------------------ consensus_10655#5 ------------------------------------------------------------ consensus_10655#0 GAAATTTCGGTGACCGCTATTTTGGTACTACTTTGGATCTAGAAACAAGATAACGAAATC 1194 consensus_10655#2 ------------------------------------------------------------ consensus_10655#3 ------------------------------------------------------------ consensus_10655#4 ------------------------------------------------------------ consensus_10655#1 ------------------------------------------------------------ consensus_10655#5 ------------------------------------------------------------ consensus_10655#0 TGATTGCTTCTTTTCTTCATAATATTCTGCAACACTTCTGCCAATCTGAGTGAATTACAT 1254 consensus_10655#2 ------------------------------------------------------------ consensus_10655#3 ------------------------------------------------------------ consensus_10655#4 ------------------------------------------------------------ consensus_10655#1 ------------------------------------------------------------ consensus_10655#5 ------------------------------------------------------------ consensus_10655#0 AGTCAGGAGCCTTTTTGATTGGTTTTAGTCTGATTTTTAATTAATTCTTTCCTTTAAAAA 1314 consensus_10655#2 ------------------------------------------------------------ consensus_10655#3 ------------------------------------------------------------ consensus_10655#4 ------------------------------------------------------------ consensus_10655#1 ------------------------------------------------------------ consensus_10655#5 ------------------------------------------------------------ consensus_10655#0 GTTTTTATTTTGTTCTTCTGACAAACATTTTGTGGAAATTTGCTTTCA 1362 consensus_10655#2 ------------------------------------------------ consensus_10655#3 ------------------------------------------------ consensus_10655#4 ------------------------------------------------ consensus_10655#1 ------------------------------------------------ consensus_10655#5 ------------------------------------------------ |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||