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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10675#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 782 fasta sequence
[TTTCTACTACATGCACACCGACGTAATTAAGCGCCCACTTTTAAAACGCTTCTGTATTCACCCCAACCGCCTCCTGTGTTCGCCTTCATTCCCACAACACAGCACACGAATAATGTAATGTACGTAAAATATAGTATAAGTTCCAAATTTTTATT-GAAAACAAAAAGCTTATTATTGTACAACGTTATGAGCAGTTGGCAGATGGTAGAGCATCAATGTTCCTGATGTAATTGCAATTGTCACGGACCAGACATTTCACGCATTGTTTCTTTCCATCAGGCCTTTTGGACTATGGAGAGTCAAACAATTCTTGTGAATTGGTTATATCCTTGAACACGAAAGACTCTACGTGTTCTTGGTTCCGTCGATGACCCTTCTGTACTTTGTCTCTCATTTCGTGAAAATAACTTTGTGTAGCCATGTCATATAGTTTCGTAAGGTCTTTCTTGTTGACAGATGACGACAGGAATCGATTAGTAAGTGCACTTCGTACGCAGCCATAAAACCGGCACTTCTGAATCGTTTGTTTTGATGAAGTACCAAGTTGCGTGAAATTAATGGCGACTTCAGGTTTCATGATGTAGGACAGAAGATATAGCATGGAGGTTTCAGGATCATCATCCATTAAACGCGTCAACATGGCCATAAATCTGTTCCTCACGTGCAGGCGAAAAAGCGACATTTATTTACGCTTTCGTCCGCTTTATTCCCCTTTTTTCGCCTTTATTTCCCCTTTATTGGTTGTTTAGGTCAATACCATAATAAGGGTGGTAAGTCATATG]
[-] EMBL CD135102 [TTTCTACTACATGCACACCGACGTAATTAAGCGCCCACTTTTAAAACGCTTCTGTATTCACCCCAACCGCCTCCTGTGTTCGCCTTCATTCCCACAACACAGCACACGAATAATGTAATGTACGTAAAATATAGTATAAGTTCCAAATTTTTATT GAAAACAAAAAGCTTATTATTGTACAACGTTATGAGCAGTTGGCAGATGGTAGAGCATCAATGTT ]
[-] EMBL CD077377 [ TTCATTCCCACAACACAGCACACGAATAATGTAATGTACGTAAAATATAGTATAAGTTCCAAATTTTTATT GAAAACAAAAAGCTTATTATTGTACAACGTTATGAGCAGTTGGCAGATGGTAGAGCATCAATGTTCCTGATGTAATTGCAATTGTCACGGACCAGACATTTCACGCATTGTTTCTTTCCATCAGGCCTTTTGGACTATGGAGAGTCAAACAATTCTTGTGAATTGGTTATATCCTTGAACACGAAAGACTCTACGTGTTCTTGGTTCCGTCGATGACCCTTCTGTACTTTGTCTCTCATTTCGTGAAAATAACTTTGTGTAGCCATGTCATATAGTTTCGTAAGGTCTTTCTTGTTGACAGATGACGACAGGAATCGATTAGTAAGTGCACTTCGTACGCAGCCATAAAACCGGCACTTCTGAATCGTTTGTTTTGATGAAGTACCAAGTTGCGTGAAATTAAT ]
[+] EMBL CD077273 [ ATTTTTATTGGAAAACAAAAAGCTTATTATTGTACAACGTTATGAGCAGTTGGCAGATGGTAGAGCATCAATGTTCCTGATGTAATTGCAATTGTCACGGACCAGACATTTCACGCATTGTTTCTTTCCATCAGGCCTTTTGGACTATGGAGAGTCAAACAATTCTTGTGAATTGGTTATATCCTTGAACACGAAAGACTCTACGTGTTCTTGGTTCCGTCGATGACCCTTCTGTACTTTGTCTCTCATTTCGTGAAAATAACTTTGTGTAGCCATGTCATATAGTTTCGTAAGGTCTTTCTTGTTGACAGATGACGACAGGAATCGATTAGTAAGTGCACTTCGTACGCAGCCATAAAACCGGCACTTCTGAATCGTTTGTTTTGATGAAGTACCAAGTTGCGTGAAATTAATGGCGACTTCAGGTTTCATGATGTAGGACAGAAGATATAGCATGGAGGTTTCAGGATCATCATCCATTAAACGCGTCAACATGGCCATAAATCTGTTCCTCACGTGCAGGCGAAAAAGCGACATTTATTTACGCTTTCGTCCGCTTTATTCCCCTTTTTTCGCCTTTATTTCCCCTTTATTGGTTGTTTAGGTCAATACCATAATAAGGGTGGTAAGTCATATG]
[+] EMBL CD059605 [ ttaTTCCGTCGATGACGCTTCTGTACTTTGTCTCTCATGTCGTGGAAATAACTTTGCGTAGCCATGTCATATAGTTTCGCAAGGTCTTTCTCGTTGACAGATGACGACAGGAATCGATTAGTAAGTGCACTTCGTACGCAGCCATAAAACCGGCACTTCTGAATCGCTCGTTTTGATGAAGCACCAAGTTGCGTACAATCAATGGCGACTTCAGGTTTCATGATGTAGAACAGAAGATATCGCATGGAGGTTTTAGGATCATCATCCAT ]
consensusID : consensus_10675#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 598 fasta sequence
[GAAATTGTATTCAAAATAATAATGGTATGTGAACAGTAATCACTGATTTGAATAACGTTCATATATTTATAGTATATACATAAGAAGCTTCTAGATTTTTCTCCAATAATATGCCCGGGCTGATCAGTTTAAAATTAGCCAATCGGCGCGCAGCAACACCTTTATGCATAAAACATGCTCTAATCCAATCTATGTCCCGCTAACACCAGAATTGATCGATACTAATTAGTGTTTGGTTGCCACATAACCTAACAAACAAAACTGGCTTTATAAATTGTCTACGTAACGACTACCAACGACGTTGAGTGGATAGAAAACACAACAGATACTGAGTGTATCAGAGTAAAGTAACCGTCGGTAGTTATTTAGTTTTAACAAATGAACTGACCTGGAATTAGAAAGTCAGCGACATAACTATTGACAGAGACATGCCGTTGATGATTTCTAAGACATGCACTTTACAATTCGGGAGACATAACTGGCAACCAAGTAACTGGGTTACTAAATTCCACCCTTTTTTACCCCTAAAGGGAACGGGTTTTTTACCCCTGAAAGAAACTTGCACTGGAGGGTTGATCAAAAATTTTTTTAATTGTTC]
[+] EMBL CD073549 [GAAATTGTATTCAAAATAATAATGGTATGTGAACAGTAATCACTGATTTGAATAACGTTCATATATTTATAGTATATACATAAGAAGCTTCTAGATTTTTCTCCAATAATATGCCCGGGCTGATCAGTTTAAAATTAGCCAATCGGCGCGCAGCAACACCTTTATGCATAAAACATGCTCTAATCCAATCTATGTCCCGCTAACACCAGAATTGATCGATACTAATTAGTGTTTGGTTGCCACATAACCTAACAAACAAAACTGGCTTTATAAATTGTCTACGTAACGACTACCAACGACGTTGAGTGGATAGAAAACACAACAGATACTGAGTGTATCAGAGTAAAGTAACCGTCGGTAGTTATTTAGTTTTAACAAATGAACTGACCTGGAATTAGAAAGTCAGCGACATAACTATTGACAGAGACATGCCGTTGATGATTTCTAAGACATGCACTTTACAATTCGGGAGACATAACTGGCAACCAAGTAACTGGGTTACTAAATTCCACCCTTTTTTACCCCTAAAGGGAACGGGTTTTTTACCCCTGAAAGAAACTTGCACTGGAGGGTTGATCAAAAATTTTTTTAATTGTTC]
consensusID : consensus_10675#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 591 fasta sequence
[GCATTTGGCTTAATGGTTCGAAAAACTACTTTCTGAATCAAAGACTAGAACATGTAAATCGATATCAACTCCAAAAAAGGAATTGATGTATCAGTTATTAAAAATAAGGCTATCCATTTATTGCTTTACTGCTGCATAACAGAAAGGAAACTTGATTCTCATTTACTTGTAGAGATGACATGCTATCCTGTGGAGAATATAACGGTAAAATAATCTTATTGGTAAAACGCGAGATTATTAGCAAAGATGGATAGTGTCTAGCAGTGGAACCCAGGATGCGCGTTTCGTCCTATTTGGGACGCGTCAGCTGAATGTACGTGCATCTCAGAGTTCATGTTCACTCCGGGATTCAAACCAAGTACCATTCGCTTCAGACGCCATCACGTTATCCGTTTAGCTACAGAGTCCTGATAACCACTTTCTTGTGCAATAGGGTGAAGTTTAAATTCACTTGGTATTGTTTACTTGAATCTTCTCATTGATGTTTAAGACTGCAATTGGTCAGTCTCTTACTGGCATGTGTGCATACTGTGTGTATTGTCTCGATGTGCCAATAAGAGAATGATCAATCGCAGTCCTAAGCATCACTGA]
[+] EMBL CD154158 [GCATTTGGCTTAATGGTTCGAAAAACTACTTTCTGAATCAAAGACTAGAACATGTAAATCGATATCAACTCCAAAAAAGGAATTGATGTATCAGTTATTAAAAATAAGGCTATCCATTTATTGCTTTACTGCTGCATAACAGAAAGGAAACTTGATTCTCATTTACTTGTAGAGATGACATGCTATCCTGTGGAGAATATAACGGTAAAATAATCTTATTGGTAAAACGCGAGATTATTAGCAAAGATGGATAGTGTCTAGCAGTGGAACCCAGGATGCGCGTTTCGTCCTATTTGGGACGCGTCAGCTGAATGTACGTGCATCTCAGAGTTCATGTTCACTCCGGGATTCAAACCAAGTACCATTCGCTTCAGACGCCATCACGTTATCCGTTTAGCTACAGAGTCCTGATAACCACTTTCTTGTGCAATAGGGTGAAGTTTAAATTCACTTGGTATTGTTTACTTGAATCTTCTCATTGATGTTTAAGACTGCAATTGGTCAGTCTCTTACTGGCATGTGTGCATACTGTGTGTATTGTCTCGATGTGCCAATAAGAGAATGATCAATCGCAGTCCTAAGCATCACTGA]
consensusID : consensus_10675#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 490 fasta sequence
[GCGGATATGGGTACGGCCTGCCACGAAAATTATACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAAAACCAATCAGTGGACATCGCAATGCTTTGTTTTAATTAGACAGTCGGATTCCCCTGGTCCGTGCCAGTTCTGAGTTAGCCGTCGCGCGCCAGACCATGAAAGTACAGCCGCTTGACGCAACGTGGAACATGTCCTCGCGCGTTGCTA-GCTGCACGACACTAACAGCTGAAACCGCCCACGATCGACCCGGGTCAGAGTCCAGTAACCTCACCACAACGCGCACCGAAGCACACAAAGCAGCAAAGAAACCAGCCCTGAACATGGATGGCGCTCGAGCGTTGGACCTATTCCGGACCGTTGCTGTAAGCTAGGCCTATGCTGTGTGAGCGCCACACCGGCGGAGCGAACGGGCGGGAG]
[+] EMBL CD132614 [GCGGATATGGGTACGGCCTGCCACGAAAATTATACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAAAACCAATCAGTGGACATCGCAATGCTTTGTTTTAATTAGACAGTCGGATTCCCCTGGTCCGTGCCAGTTCTGAGTTAGCCGTCGCGCGCCAGACCATGAAAGTACAGCCGCTTGACGCAACGTGAAACATGTCCTCGCGCGTTGCTAGGCTGCACGACACTAACAGCTG ]
[+] EMBL CD112837 [ TCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAAAACCAATCAGTGGACATCGCAATGCTTTGTTTTAATTAGACAGTCGGATTCCCCTGGTCCGTGCCAGTTCTGAGTTAGCCGTCGCGCGCCAGACCATGGAAGTACAGCCGCTTGACGCAACGTGGAACATGTCCTCGCGCGTTGCTA GCTGCACGACACTAACAGCTGAAACCGCCCACGATCGACCCGGGTCAGAGTCCAGTAACCTCACCACAACGCGCACCGAAGCACACAAAGCAGCAAAGAAACCAGCCCTGAACATGGATGGCGCTCGAGCGTTGGACCTATTCCGGACCGTTGCTGTAAGCTAGGCCTATGCTGTGTGAGCGCCACACCGGCGGAGCGAACGGGCGGGAG]
[-] EMBL CD184277 [ GTTCTGAGTTAGCCGTCGCGCGCCAGACCATGTAAGTACAGCCGCTTGACGCAACGTGGAACATGTCCTCGCGCGTTGCTA GCTGCACGACACTAACAGCTGAAACCGCCCACGATCGACCCGGGTCAGAGTCCAGTAACCTCACCACAACGCGCGCGGAAGCACACAAAGCAGCAAAGAAACCAGCCCTGAAAATGGATGGCGCTCGAGCGTTGGACCTATACCGGACCGTTGCTGTAAGCTAG ]
consensusID : consensus_10675#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 446 fasta sequence
[AGTTACAAGAAATACGTTTTAAGATATATTGACGAGAAAAGAATGAACATTATCATAAATCATTAAGCAAAGATGGATAGTGGCTAGCAGTGGAATCCTGGACGCGCGTTTCGTCCTATTTGGGACTCGTCAGCTGGATGTACCTGTATCTCAGAGTTGATGTTCACTATGGGACTCGATCCCAGTACCTTTCGCTTCAATCGCCCTCTTTGCTTATAATGCTTGTGAGTTAAGGCTATATCGAGGCCATACGCACAGTATGCATATACGCCAATAAGAGACTGGCCAGTTACAGTCCTAAGCATCAACGGGAAGATTCAAACAAACAATACTAAGTGAACTATCATAAATCGCTAATTAAAAATAATGGTTATTAGTATTTCACTTAACTGAGAATTGAATAGTTTAATAATCTAACTANATTGATGTTAGATAATCCATTGGTT]
[+] EMBL CD090512 [AGTTACAAGAAATACGTTTTAAGATATATTGACGAGAAAAGAATGAACATTATCATAAATCATTAAGCAAAGATGGATAGTGGCTAGCAGTGGAATCCTGGACGCGCGTTTCGTCCTATTTGGGACTCGTCAGCTGGATGTACCTGTATCTCAGAGTTGATGTTCACTATGGGACTCGATCCCAGTACCTTTCGCTTCAATCGCCCTCTTTGCTTATAATGCTTGTGAGTTAAGGCTATATCGAGGCCATACGCACAGTATGCATATACGCCAATAAGAGACTGGCCAGTTACAGTCCTAAGCATCAACGGGAAGATTCAAACAAACAATACTAAGTGAACTATCATAAATCGCTAATTAAAAATAATGGTTATTAGTATTTCACTTAACTGAGAATTGAATAGTTTAATAATCTAACTANATTGATGTTAGATAATCCATTGGTT]
[+] EMBL CD090467 [ GAACATTATCATAAATCATTAAGCAAAGATGGATAGTGGCTAGCAGTGGAATCCTGGACGCGCGTTTCGTCCTATTTGGGACTCGTCAGCTGGATGTACCTGTATCTCACAGTTGATGTTCACTATGGGACTCGATCCCAATACCTTTCGCTTCAATCGCCCTCTTTGCTTATAATGCTTGTGAGTTAACGCTATATCGAGGCCATACGCACAGTATGCATATACCCCAATAAGAGACTGGCCAGTTACAGTCCTAAGCATCAACGGGAAGATTCAAACAAACAATACTAAGTGAACTATCATAAATCGCTAATTAAAAATAATGGTTATTAGTATTTCACTTAACTGAGAATTGAATAGTTTAATAATCTAACTAAATCGATGTTAGATAATCCATTGTTT]
consensusID : consensus_10675#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 402 fasta sequence
[ACCAGGCCTGTTGGACTATGGAGAGTCAAACAATTCTTGTGAATTGGTAATATCCTTGAACACGGAAGACTGTACGTGTTCTTTGTTCCGTCGATGACGCTTCTGGACTCTGTCTCTCATGTCGTGGAAATAACTTTGCGTAGCCATGTCATATAGTTTCGCAAGGTCTTTCTCGTTGATAGATGACGAAAGGAAACGATTAGTCAGTGCACTTCGTACGCAGTCGTAAAACCTGCACTTCTGAATCGCTCGTTTTGATGAAGTACCCAGTAACGTGAAATTAATGGCGACTTCAGGTTTCGTGATGTAGGACAGAATATATCGCATGGAGGTTTTAGGATCATCATCCATTAGACGTGTCAACATAGCCATAAATCTGTCCCTCACGTCTTTTTGCTCTAG]
[-] EMBL CD128251 [ACCAGGCCTGTTGGACTATGGAGAGTCAAACAATTCTTGTGAATTGGTAATATCCTTGAACACGGAAGACTGTACGTGTTCTTTGTTCCGTCGATGACGCTTCTGGACTCTGTCTCTCATGTCGTGGAAATAACTTTGCGTAGCCATGTCATATAGTTTCGCAAGGTCTTTCTCGTTGATAGATGACGAAAGGAAACGATTAGTCAGTGCACTTCGTACGCAGTCGTAAAACCTGCACTTCTGAATCGCTCGTTTTGATGAAGTACCCAGTAACGTGAAATTAATGGCGACTTCAGGTTTCGTGATGTAGGACAGAATATATCGCATGGAGGTTTTAGGATCATCATCCATTAGACGTGTCAACATAGCCATAAATCTGTCCCTCACGTCTTTTTGCTCTAG]
[+] EMBL CD128429 [ AGG CTGTTGGACTATGGAGAGTCAAACAATTCTTGTGAATTGGTAATATCCTTGAACACGGAAGACTGTACGTGTTCTTTGTTCCGTCGATGACGCTTCTGGACTCTGTCTCTCATGTCGTGGAAATAACTTTGCGTAGCCATGTCATATAGTTTCGCAAGGTCTTTCTCGTTGATAGATGACGAAAGGAAACGATTAGTCAGTGCACTTCGTACGCAGTCGTAAAACCTGCACTTCTGAATCGCTCGTTTTGATGAAGTACCCAGTAACGTGAAATTAATGGCGACTTCAGGTTTTGTGATGTAGGACAGAATATATCGCATGGAGGTTTTAGGATCATCATCCATTAGACGTGTCAACATAGCCATAAATCTGTCCCTCACGTCTTTTTGCTCTAG]
[-] EMBL CD171523 [ CGTGGAAATAACTTTGCGTCGACATGTCATATGGTTTCGCAAGGTCTTTCTCGTTGACAGATGACGACAGGAATCGATTAGTCAGTGCACTTCGTACGCAGCCATAAAACCTGCACTTCTGAATCG ]
consensusID : consensus_10675#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 375 fasta sequence
[TCGATTTAGAGGATCCCATTGGAGTCTGAGGCGCTTGCAGAGACTGCAGCACAATCGGAACGGGAACGATTGGTTGAGCGTGTCGGTGAGATGGAGGCGGAATATGGTGAAGTTGGTGAAGGCGTATTTCGAAGGTGAGACGGACAGCCGACGTCGGCACGTCGAAGTGTTCGGTGAGACTAAAGCAAAAAAAATATCGTCAGATAGTCGTTCACGCAGTCCCCACTCTCCAGGAAGACCAATAAATAATGCAAGTACAACAAGTAGGCAACATGGGAAAGAACTTGAATCGCATGTAGATTCCTGCAGTCGTGGGCGTCATAATAATCACTCAGAAGAGTCTAGNCTTANAACAGTGGATGGTCATATCANGCG]
[+] EMBL CD065133 [TCGATTTAGAGGATCCCATTGGAGTCTGAGGCGCTTGCAGAGACTGCAGCACAATCGGAACGGGAACGATTGGTTGAGCGTGTCGGTGAGATGGAGGCGGAATATGGTGAAGTTGGTGAAGGCGTATTTCGAAGGTGAGACGGACAGCCGACGTCGGCACGT ]
[+] EMBL CD111880 [ TGGAGTCTGAGGCGCTTGCAGAGACTGCAGCGCAACCGGAACGGGAACGATTGGTTGAGCGTGTCGGTGAGATGGAGGCGGAATATGGTGAAGTTGGTGAAGGCGTATTT GAAGGTGAGACGGA AGCCGA GTCGGCA GTCGAAGTGTTCGGTGAGACTAAAGCAAAAAAAATATCGTCAGATAGTCGTTCACGCAGTCCCCACTCTCCAGGAAGACCAATAAATAATGCAAGTACAACAAGTAGGCAACATGGGAAAGAACTTGAATCGCATGTAGATTCCTGCAGTCGTGGGCGTCATAATAATCACTCAGAAGAGTCTAGNCTTANAACAGTGGATGGTCATATCANGCG]
consensusID : consensus_10675#7 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 321 fasta sequence
[AATGCAAGGTTTAGAAACTTTAAGTGTAAGATCAGTTGGTGAGCGCATTACCAAAGTTTGACTGAGAGGAGGAGAATAAGGATCAGGCAGTTTGGTTAGCATATCGCATAGAAAACTCTCAAAATCTTTGAAAAACGCATTGACCGCTGTTGTAATGATTGATAACTGATATTGATTACTTGAACCAAATGAGCTGGAAGACGGTGAAGGAATATCTGTAGGCTTGTTACTCTTTGGTTTTGACACTGTACGACAACGGTTAACAGTAACTTGGAATACATGCCCTCCAATAGGTTGTGGTGGGTTGCTAACAAGGTGACG]
[+] EMBL CD197948 [AATGCAAGGTTTAGAAACTTTAAGTGTAAGATCAGTTGGTGAGCGCATTACCAAAGTTTGACTGAGAGGAGGAGAATAAGGATCAGGCAGTTTGGTTAGCATATCGCATAGAAAACTCTCAAAATCTTTGAAAAACGCATTGACCGCTGTTGTAATGATTGATAACTGATATTGATTACTTGAACCAAATGAGCTGGAAGACGGTGAAGGAATATCTGTAGGCTTGTTACTCTTTGGTTTTGACACTGTACGACAACGGTTAACAGTAACTTGGAATACATGCCCTCCAATAGGTTGTGGTGGGTTGCTAACAAGGTGACG]
consensusID : consensus_10675#8 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 278 fasta sequence
[AGTATAATGTGGANTCGTTACCAATATATCGAGGGCCTTTCTAAAAAGCTGGCTAAATGANAGTAGGAGCTGTGTCCCACGCTGTGTTGAAACGTGATCTGGTGCGGATGCATGACCGAAAGCTTTCAGCTAAACAAGTCCACTTAGAACAACGTGGTCCAGCATCCAATGTCCGAACACTTAATGAGCTATTGGATTTTGGGGGAATTATTTCACAGCTCACAGGTCACTCCCCCCCCTGAGTGGAGGTAGTGATCGCCCCTAAAGACGTGCACCAG]
[+] EMBL AA999534 [AGTATAATGTGGANTCGTTACCAATATATCGAGGGCCTTTCTAAAAAGCTGGCTAAATGANAGTAGGAGCTGTGTCCCACGCTGTGTTGAAACGTGATCTGGTGCGGATGCATGACCGAAAGCTTTCAGCTAAACAAGTCCACTTAGAACAACGTGGTCCAGCATCCAATGTCCGAACACTTAATGAGCTATTGGATTTTGGGGGAATTATTTCACAGCTCACAGGTCACTCCCCCCCCTGAGTGGAGGTAGTGATCGCCCCTAAAGACGTGCACCAG]
consensusID : consensus_10675#9 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 115 fasta sequence
[TCACCATATTCCGCCTCCATCTCACCGACACGCTCAACCAATCGTTCCCGTTCCGGTTGTGCTGCAGTCTCTGCAAGCGCCTCAGACTCCAAGTGGGTACCGAAAGCTCGAATTC]
[+] EMBL CD068479 [TCACCATATTCCGCCTCCATCTCACCGACACGCTCAACCAATCGTTCCCGTTCCGGTTGTGCTGCAGTCTCTGCAAGCGCCTCAGACTCCAAGTGGGTACCGAAAGCTCGAATTC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10675#0 TTTCTACTACATGCACACCGACGTAATTAAGCGCCCACTTTTAAAACGCTTCTGTATTCA 60
consensus_10675#5 ------------------------------------------------------------
consensus_10675#8 ------------------------------------------------------------
consensus_10675#3 ------------------------------------------------------------
consensus_10675#9 ------------------------------------------------------------
consensus_10675#1 ------------------------------------------------------------
consensus_10675#4 ------------------------------------------------------------
consensus_10675#2 ------------------------------------------------------------
consensus_10675#7 ------------------------------------------------------------
consensus_10675#6 ------------------------------------------------------------
consensus_10675#0 CCCCAACCGCCTCCTGTGTTCGCCTTCATTCCCACAACACAGCACACGAATAATGTAATG 120
consensus_10675#5 ------------------------------------------------------------
consensus_10675#8 ------------------------------------------------------------
consensus_10675#3 ------------------------------------------------------------
consensus_10675#9 ------------------------------------------------------------
consensus_10675#1 ------------------------------------------------------------
consensus_10675#4 ------------------------------------------------------------
consensus_10675#2 ------------------------------------------------------------
consensus_10675#7 ------------------------------------------------------------
consensus_10675#6 ------------------------------------------------------------
consensus_10675#0 TACGTAAAATATAGTATAAGTTCCAAATTTTTATTGAAAACAAAAAGCTTATTATTGTAC 180
consensus_10675#5 ------------------------------------------------------------
consensus_10675#8 ------------------------------------------------------------
consensus_10675#3 ------------------------------------------------------------
consensus_10675#9 ------------------------------------------------------------
consensus_10675#1 ------------------------------------------------------------
consensus_10675#4 ------------------------------------------------------------
consensus_10675#2 ----------GCATTTGGCTTAATGGTTCGAAAAACTACTTTCTGAATCAAAGACTAGAA 50
consensus_10675#7 ------------------------------------------------------------
consensus_10675#6 ------------------------------------------------------------
consensus_10675#0 AACGTTATGAGCAGTTGGCAGATGGTAGAGCATCAATGTTCCTGATGTAATTGCAATTGT 240
consensus_10675#5 ------------------------------------------------------------
consensus_10675#8 ------------------------------------------------------------
consensus_10675#3 ------------------------------------------------------------
consensus_10675#9 ------------------------------------------------------------
consensus_10675#1 ----GAAATTGTATTCAAAATAATAATGGTATGTGAACAGTAATCACTGATTTGAATAAC 56
consensus_10675#4 ------------------------------------------------------------
consensus_10675#2 CATGTAAATCGATATCAACTCCAAAAAAGGAATTGATGTATCAGTTATTAAAAATAAGGC 110
consensus_10675#7 ------------------------------------------------------------
consensus_10675#6 ------------------------------------------------------------
consensus_10675#0 CACGGACCAGACATTTCACGCATTGTTTCTTTCCATCAGGCCTTTTGGACTATGGAGAGT 300
consensus_10675#5 ----------------------------------ACCAGGCCTGTTGGACTATGGAGAGT 26
consensus_10675#8 ------------------------------------------------------------
consensus_10675#3 -----------------------------------------------GCGGATATGGGTA 13
consensus_10675#9 ------------------------------------------------------------
consensus_10675#1 GTTCATATATTTATAGTATATACATAAGAAGCTTCTAGATTTTTCTCCAATAATATGCCC 116
consensus_10675#4 ------------------------------------------------------------
consensus_10675#2 TATCCATTTATTGCTTTACTGCTGCATAACAGAAAGGAAACTTGATTCTCATTTACTTGT 170
consensus_10675#7 ------------------------------------------------------------
consensus_10675#6 ---------------------------------------------TCGATTTAGAGGATC 15
consensus_10675#0 CAAACAATTCTTGTGAATTGGTTATATCCTTGAACACGAAAGACTCTA--CGTGTTCT-T 357
consensus_10675#5 CAAACAATTCTTGTGAATTGGTAATATCCTTGAACACGGAAGACTGTA--CGTGTTCT-T 83
consensus_10675#8 --------------------------------------------------AGTATAATGT 10
consensus_10675#3 CGGCCTGCCACGAAAATTATACCTTAAGAGAGTCATAGTTACTCCCGC--CGTTTACCCG 71
consensus_10675#9 ------------------------------------------------------------
consensus_10675#1 GGGCTGATCAGTTTAAAATTAGCCAATCGGCGCGCAGCAACACCTTTA--TGCATAAAAC 174
consensus_10675#4 ---AGTTACAAGAAATACGTTTTAAGATATATTGACGAGAAAAGAATG--AACATTATCA 55
consensus_10675#2 AGAGATGACATGCTATCCTGTGGAGAATATAACGGTAAAATAATCTTATTGGTAAAACGC 230
consensus_10675#7 ----------------------------------------------------------AA 2
consensus_10675#6 CCATTGGAGTCTGAGGCGCTTGCAGAGACTGCAGCACAATCGGAACGGGAACGATTGGTT 75
consensus_10675#0 GGTTCCGTCGATGACCCTTCTGTACTTTGTCTCTCATTTCGTGA--AAATAACTTTGTGT 415
consensus_10675#5 TGTTCCGTCGATGACGCTTCTGGACTCTGTCTCTCATGTCGTGG--AAATAACTTTGCGT 141
consensus_10675#8 GGANTCGTTACCAATATATCGAGGGCCTTTCTAAAAAGCTGGCT--AAATGANAGTA-GG 67
consensus_10675#3 CGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAG-AAATCACATTGCGT 130
consensus_10675#9 --------TCACCATATTCCGCCTCCATCTCACCGACACGCTCAACCAATCGTTCCCGTT 52
consensus_10675#1 ATGCTCTAATCCAATCTATGTCCCGCTAACACCAGAATTGATCG--ATACTAATTAGTGT 232
consensus_10675#4 TAAATCATTAAGCAAAGATGGATAGTGGCTAGCAGTGGAATCCTGGACGCGCGTTTCGTC 115
consensus_10675#2 GAGATTATT-AGCAAAGATGGATAGTGTCTAGCAGTGGAACCCAGGATGCGCGTTTCGTC 289
consensus_10675#7 TGCAAGGTTTAGAAACTTTAAGTGTAAGATC----AGTTGGTGAGCGCATTACCAAA-GT 57
consensus_10675#6 GAGCGTGTCGGTGAGATGGAGGCGGAATATGGTGAAGTTGGTGAAGGCGTATTTCGAAGG 135
consensus_10675#0 AGCCATGTCATATA--GTTTCGTA--AGGTC-TTTCTTGTTGACAGATGAC---GACAGG 467
consensus_10675#5 AGCCATGTCATATA--GTTTCGCA--AGGTC-TTTCTCGTTGATAGATGAC---GAAAGG 193
consensus_10675#8 AGCTGTGTCCCACGCTGTGTTGAA--ACGTGATCTGGTGCGGATGCATGACC--GAAAGC 123
consensus_10675#3 CAAAACCAATCAGTGGACATCGCA--ATGC--TTTGTTTTAATTAGACAGTC--GGATTC 184
consensus_10675#9 CCGGTTGTGCTGCAGTCTCTGCAA--GCGCCTCAGACTCCAAGTGGGTACC---GAAAGC 107
consensus_10675#1 TTGGTTGCCACATAACCTAACAAAC-AAAACTGGCTTTATAAATTGTCTACG--TAACGA 289
consensus_10675#4 CTATTTGGGACTCG-TCAGCTGGAT-GTACCTGTATCTCAGAGTTGATGTTCACTATGGG 173
consensus_10675#2 CTATTTGGGACGCG-TCAGCTGAAT-GTACGTGCATCTCAGAGTTCATGTTCACTCCGGG 347
consensus_10675#7 TTGACTGAGAGGAGGAGAATAAGGA-TCAGGCAGTTTGGTTAGCATATCGCATAGAAAAC 116
consensus_10675#6 TGAGACGGACAGCCGACGTCGGCACGTCGAAGTGTTCGGTGAGACTAAAGCA--AAAAAA 193
consensus_10675#0 AATCGATTAG---TAAGTGCACTTCGTACGCAGCC-ATAAAACCGGCACTTCTGAAT-CG 522
consensus_10675#5 AAACGATTAG---TCAGTGCACTTCGTACGCAGTC-GTAAAACCTGCACTTCTGAAT-CG 248
consensus_10675#8 TTTCAGCTAAA--CAAGTCCACTTAGAACAACGTG-GTCCAGCATCCAATGTCCGAA-CA 179
consensus_10675#3 CCCTGGTCCGTGCCAGTTCTGAGTTAGCCGTCGCGCGCCAGACCATGAAAGTACAGC-CG 243
consensus_10675#9 TCGAATTC---------------------------------------------------- 115
consensus_10675#1 CTACCAACGACGTTGAGTGGATAGAAAACACAACAGATACTGAGTGTATCAGAGTAA-AG 348
consensus_10675#4 ACTCGATCCCAGTACCTTTCGCTTCAATCGCCCTCTTTGCTTATAATGCTTGTGAGT-TA 232
consensus_10675#2 ATTCAAACCAAGTACCATTCGCTTCAGACGCCATC---ACGTTATCCGTTTAGCTAC-AG 403
consensus_10675#7 TCTCAAAATCTTTGAAAAACGCATTGACCGCTGTTGTAATGATTGATAACTGATATT-GA 175
consensus_10675#6 ATATCGTCAGATAGTCGTTCACGCAGTCCCCACTCTCCAGGAAGACCAATAAATAATGCA 253
consensus_10675#0 TTTGTTTTGATGAAGTACCAAGTTGCGTGAAATTAATGGCGACTTCAGGTTTCATGATGT 582
consensus_10675#5 CTCGTTTTGATGAAGTACCCAGTAACGTGAAATTAATGGCGACTTCAGGTTTCGTGATGT 308
consensus_10675#8 CT-----TAATGAGCTATTGGATTTTGGGGGAATTAT------TTCACAGCTCACAGGTC 228
consensus_10675#3 CTTGACGCAACGTGGAACATGTCCTCGCGCG--TTGCTAGCTGCACGACACTAACAGCTG 301
consensus_10675#9 ------------------------------------------------------------
consensus_10675#1 TAACCGTCGGT-AGTTATTTAGTTTTAACAAATGAACTG---ACCTGGAATTAGAAAGTC 404
consensus_10675#4 AG-GCTATATCGAGGCCATACGCACAGTATGCATATACGCCAATAAGAGACTGGCCAGTT 291
consensus_10675#2 AGTCCTGATAACCACTTTCTTGTGCAATAGGGTGAAGTTTAAATTC---ACTTGGTATTG 460
consensus_10675#7 TTACTTGAACCAAATGAGCTGGAAGACGGTGAAGGAATAT---CTGTAGGCTTGTTACTC 232
consensus_10675#6 AGTACAACAAGTAGGCAACATGGGAAAGAACTTGAATCGCATGTAGATTCCTGCAGTCGT 313
consensus_10675#0 AGGACAGAAGATATAGCATGGAGGTTT--CAGGATCATCAT-CCATTAAACG-CGTCA-A 637
consensus_10675#5 AGGACAGAATATATCGCATGGAGGTTT--TAGGATCATCAT-CCATTAGACG-TGTCA-A 363
consensus_10675#8 A---CTCCCCCCCCTGAGTGGAGGTAG--T--GATCGCCCC-TAAAGACGTG-CACCA-G 278
consensus_10675#3 AAACCGCCCACGATCGACCCGGGTCAGAGTCCAGTAACCTCACCACAACGCG-CACCG-A 359
consensus_10675#9 ------------------------------------------------------------
consensus_10675#1 AGCGACATAACTATTGACAGAGACATGCCGTTGATGATTTCTAAGACATGCA-CTTTACA 463
consensus_10675#4 ACAGTCCTAAGCATCAACGGGAAGATTCAAACAAACAATACTAAGTGAACTATCATAAAT 351
consensus_10675#2 TTTACTTGAATCTTCTCATTGATGTTTAAGACTGCAATTGGTCAGTCTCTTACTGGCATG 520
consensus_10675#7 TTTGGTTTTGACACTGTACGACAACGGTTAACAGTAACTTGGAATACATGCCCTCCAATA 292
consensus_10675#6 GGGCGTCATAATAATCACTCAGAAGAGTCTAGNCTTANAACAGTGGATGGTCATATCANG 373
consensus_10675#0 CATGGCCATAAATCTGTTCCTCACGTGCAGGCGAAAAAGCGACATTTATTTACGCTTTCG 697
consensus_10675#5 CATAGCCATAAATCTGTCCCTCACGTCTTTTTGCTCTAG--------------------- 402
consensus_10675#8 ------------------------------------------------------------
consensus_10675#3 AGCACACAAAGCAGCAAAGAAACCAGCCCTGAACATGGATGGCGCTCGAGCGTTGGACCT 419
consensus_10675#9 ------------------------------------------------------------
consensus_10675#1 ATTCGGGAGACATAACTGGCAACCAAGTAACTGGGTTACTAAATTCCACCCTTTTTTACC 523
consensus_10675#4 CGCTAATTAAAAATAATGGTTATTAGTATTTCACTTAACTGAGAATTGAATAGTTTAATA 411
consensus_10675#2 TGTGCATACTGTGTGTATTGTCTCGATGTGCCAATAAGAGAATGATCAATCGCAGTCCTA 580
consensus_10675#7 GGTTGTGGTGGGTTGCTAACAAGGTGACG------------------------------- 321
consensus_10675#6 CG---------------------------------------------------------- 375
consensus_10675#0 TCCGCTTTATTCCCCTTTTTTCGCCTTTATTTCCCCTTTATTGGTTGTTTAGGTCAATAC 757
consensus_10675#5 ------------------------------------------------------------
consensus_10675#8 ------------------------------------------------------------
consensus_10675#3 ATTCCGGACCGTTGCTGTAAGCTAGGCCTATGCTGTGTGAGCGCCACACCGGCGGAGCGA 479
consensus_10675#9 ------------------------------------------------------------
consensus_10675#1 CCTAAAGGGAACGGGTTTTTTACCCCTGAAAGAAACTTGCACTGGAGGGTTGATCAAAAA 583
consensus_10675#4 ATCTAACTANATTGATGTTAGATAATCCATTGGTT------------------------- 446
consensus_10675#2 AGCATCACTGA------------------------------------------------- 591
consensus_10675#7 ------------------------------------------------------------
consensus_10675#6 ------------------------------------------------------------
consensus_10675#0 CATAATAAGGGTGGTAAGTCATATG 782
consensus_10675#5 -------------------------
consensus_10675#8 -------------------------
consensus_10675#3 ACGGGCGGGAG-------------- 490
consensus_10675#9 -------------------------
consensus_10675#1 TTTTTTTAATTGTTC---------- 598
consensus_10675#4 -------------------------
consensus_10675#2 -------------------------
consensus_10675#7 -------------------------
consensus_10675#6 -------------------------
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||