cluster # 10677

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Schistosoma mansoni
cluster # 10677 cluster # 10677 Sequences # 20 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10677#0 length = 2093 sequences # 19

consensus_10677#1 length = 140 sequences # 1

consensusID : consensus_10677#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 19
consensus length = 2093
fasta sequence

                              [AGCTTTACCACCTGAATCCGGTATATTTATGAGACCTTTAGGAGGTTATCAGTTGCCAAGAAGTTCTCAAGCTGTAGAGCCAAATATATGGTTAACTGAAACAAATATAGCCCTACATGGAGAATGGCTTGTTCCTTTATACAAATCGGAAAATATAGCTACAATAAATGTCAAGAATTTAAGTGCAGTTGCCAGTGAATTTGTTGCATCTTTGGCAAGTATTTGCAAGGGTTCACTTCATTCACTTAAATCAAACAACGAAACACCATCTGATACGGTCGTCATTAAAAACGTAAACACTGAAAATACATCAGAAGAGCCGATTGCTAGAACACATAGTTTTAAAAGAGCTCTGGAAAACCTTGAAAATTATGACCTTAACGTTTCAACAAATGACTATAGTAATGGAATCACTGAAAATGTACCGAAAGCTGCATGGAATATCCTGAGAGATGAAGCTGAAATCTCAGGTGATGACCCTTTTAATCAGAACGAAGTGAATATTCTACCAGAGAATGAAACTGGGAATAGCTTTTATCATGAGAGTAATAAATTTGTTGTTGATAATAAAGAGCACACATACACAGACACAATTACGGCACAAACTTACTATCCTTTGGGTCGGTATGATGGAGATGAGGAAAGGCAGGAGATACATGAACCTCTTATTGTACCGGTCACTATACACCCGTTGAGTGACGACGATGACGATGAAGTTCTAA-TCG-GTAATAA-C-GGAGAATACAAAT-CC-ATGAATGAAAC-TTTTTCAAACGATCTGGTCAAATGTGATGCTGTTAGTGAGTGTAATAGTCATAACACAGAATGTTATCGAGTCGATAACGCTGCCTGCTGTATATGTAGTGATGGATTTTTCGGTGCAGGAAATGCCAAGTGTTGGTCTGAAGTCAATGATCATAAATTTTCTTTTTCTGGTTCCCTAACCGCACGCTTTGGTAGTGAGCATTCCAGTTCACCTCTGCATATTTATCTGGATATTCAACATGGTTCACTAAGACGCAGTTCTAGTGGAATTCGTGGTGGTCAGACAAACGACAGAATTTATTCAACTATACGTCTAATTACACCTGTATTCCACATTTTAAACTCGATGATTTCTAGTCCTTGTGAAAATATTCCGAAACGTGAACGTGTTTAT-ATCTTTTCACG-TAGGAAATGGATTAC-ACGTCC-TTCAAGGTGTTA-TCCAGTTTGATA-TGAAAGAGTTGGGAAATTTACAATCCAAGCCATACTTGAGCTACGCGATTTCACAACAGGAGCATACGCTAGTGGTGTAATAGAATTAGAGGCGTTTAGTACAGAAAATTTAAACCTACTCGATCGGTCTTATATAGAGGCTTACAGTGCTTCTGATAAGCCAGATAAAACGTATTACGCCAATTATAAAATTGATGATCATGGCCGTATTGTATTTCCAGAGCAAACTGTTAAATTTATTGTTGAGCATCGTGACTCAAATGAAATAAGTAATTTTCCTGAAGAAATTAATGTACATTGGTCTGCTGTTGCTGAATCAGAAAGTTGCTTGCTCAAACAAGTCAGCTCTATACCTAAGAATGAATGGTATTATATTCGTCTTAAAGATCGTGGTTACTGTAGTGAGGATTGTTCTGCACCAGATGGCTCTTGTAATTTATTCTGTGTAGATGAACCTTTGTTATTAGCCACAGAACCAAGTCCTTGTGATTGTGTAACATGTGATCGTCATGGTGAAGTGTGTCGACCAGAGGGCGCGAGTTATAGATGTGAATGTGGTCAGGGCTTGAAGCTAATGCCTGATAACACATGTCAAGCCACTTCACTGGTGGATGTAGCTAACTATCTTGGTGTACAGTGTGGTTCTGTCAATTGTCATACTCATGCTCGCTGTATTGATCCAAATCAAGCGTTTTGTCAATGTTTACCCGGTTACAGAGGAGATGGTGTTAGCCATTGTGAAAATGATCCATGTTCTAAATGTCGTCGCAATGAGATTTGTGAAAATGGTATATGTATAGCAAGTGGTGTTGATCTATGCGAAGGGGTTCAGTGTGGAGAACAAGCTTTCTGTCAAGATGGTGCATGTGTTTGTACACCAGGCT]

[+] EMBL CD068040             [AGCTTTACCACCTGAATCCGGTATATTTATGAGACCTTTAGGAGGTTATCAGTTGCCAAGAAGTTCTCAAGCTGTAGAGCCAAATATATGGTTAACTGAAACAAATATAGCCCTACATGGAGAATGGCTTGTTCCTTTATACAAATCGGAAAATATAGCTACAATAAATGTCAAGAATTTAAGTGCAGTTGCCAGTGAATTTGTTGCATCTTTGGCAAGTATTTGCAAGGGTTCACTTCATTCACTTAAATCAAACAACGAAACACCATCTGATACGGTCGTCATTAAAAACGTAAACACTGAAAATACATCAGAAGAGCCGATTGCTAGAACACATAGTTTTAAAAGAGCTCTGGAAAACCTTGAAAATTATGACCTTAACGTTTCAACAAATGACTATAGTAATGGAATCACTGAAAATGTACCGAAAGCTGCATGGAATATCCTGAGAGATGAAGCTGAAATCTCAGGTGATGACCCTTTTAATCAGAACGAAGTGAATATTCTACCAGAGAATGAAACTGGGAATAGCTTTTATCATGAGAGTAATAAATTTGTTGTTGATAATAAAGAGCACACATACACAGACACAATTACGGCACAAACTTACTATCCTTTGGGTCGGTATGATGGAGATGAGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD186845             [                                                                                                                                                                                                                                                                                                                                                                                                                                         CGAAAGCTGCATGGAATATCCTGAGAGATGAAGCTGAAATCTCAGGTGATGACCCTTTTAATCAGAACGAAGTGAATATTCTACCAGAGAATGAAACTGGGAATAGCTTTTATCATGAAAGTAATAAATTTGTTGTTGATAATAAAGAGCACACATACACAGACACAATTACGGCACAAACTTACTATCCTTTGGGTCGGTATGATGGAGATGAGGAAAGGCAGGAGATACATGAACCTCTTATTGTACCGGTCACTATACACCCGTTGAGTGACGACGATGACGATGAAGTTCTAA TCG GTAATAA C GGAGAATACAAAT CC ATGAATGAAAC TTTTTCAAACGATCTGGTCAAATGTGATGCTGTTAGTGAGTGTAATAGTCATAACACAGAATGTTATCGAGTCGATAACGCTGCCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD186899             [                                                                                                                                                                                                                                                                                                                                                                                                                                          GAAAGCTGCATGGAATATCCTGAGAGATGAAGCTGAAATCTCAGGTGATGACCCTTTTAATCAGAACGAAGTGAATATTCTACCAGAGAATGAAACTGGGAATAGCTTTTATCATGAGAGTAATAAATTTGTTGTTGATAATAAAGAGCACACATACACAGACACAATTACGGCACAAACTTACTATCCTTTGGGTCGGTATGATGGAGATGAGGAAAGGCAGGAGATACATGAACCTCTTATTGTACCGGTCACTATACACCCGTTGAGTGACGACGATGACGATGAAGTTCTAAGTCG GTAATAAGC GGAGAATACAAATGCC ATGAATGAAACTTTTTTCAAACGATCTGGTCAAATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD187376             [                                                                                                                                                                                                                                                                                                                                                                                                                                          GAAAGCTGCATGGAATATCCTGAGAGATGAAGCTGAAATCTCAGGTGATGACCCTTTTAATCAGAACGAAGTGAATATTCTACCAGAGAATGAAACTGGGAATAGCTTTTATCATGAGAGTAATAAATTTGTTGTTGATAATAAAGAGCACACATACACAGACACAATTACGGCACAAACTTACTATCCTTTGGGTCGGTATGATGGAGATGAGGAAAGGCAGGAGATACATGAACCTCTTATTGTACCGGTCACTAAACACCCGTTGAGTGACGACGATGACGATGAAGTTCTAA TCGNGTAATAA CNGGAGAATACAAAT CCNATGAATGAAAC TTTTTCAAACGATCTGGTCAAATGTGATGCTGTTAGTGAGTGTAATAGTCATAACACAGAATGTTATCGAGTCGATAACGCTGCCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD187516             [                                                                                                                                                                                                                                                                                                                                                                                                                                           AAACCTGCATGGAATATCTTGAGAGATGAAGCTGAAATCTCAGGTGATGACCCTGTTAATCAGAACGAAGTGAATATTCTACCAGAGAATGAAACTGGGAATAGCTTTTATCATGAGAGTAATAAATTTGTTGTTGATAATAAAGAGCACACATACACAGACACAATTACGGCACAAACTTACTATCCTTTGGGTCGGTATGATGGAGATGAGGAAAGGCAGGAGATACATGAACCTCTTATTGTACCGGTCACTATACACCCGTTGAGTGACGACGATGACGATGAAGTTCTAA TCG GTAATAA C GGAGAATACAAAT CC ATGAATGAAAC TTTTTCAAACGATCTGGTCAAATGTGATGCTGTTAGTGAGTGTAATAGTCATAACACAGAATGTTATCGAGTCGATAACGCTGCCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD187307             [                                                                                                                                                                                                                                                                                                                                                                                                                                                             CTGAGAGATGAAGCTGAAATCTCAGGTGATGACCCTTTTAATCAGAACGAAGTGAATATTCTACCAGAGAATGAAACTGGGAATAGCTTTTATCATGAGAGTAATAAATTTGTTGTTGATAATAAAGAGCACACATACACAGACACAATTACGGCACAAACTTACTATCCTTTGGGTCGGTATGATGGAGATGAGGAAAGGCAGGAGATACATGAACCTCTTATTGTACCGGTCACTATACACCCGTTGAGTGACGACGATGACGATGAAGTTCTAA TCG GTAATAA C GGAGAATACAAAT CC ATGAATGAAAC TTTTTCAAACGATCTGGTCAAATGTGATGCTGTTAGTGAGTGTAATAGTCATAACACAGAATGTTATCGAGTCGATAACGCTGCCTGCTGTATATGTAGTGATGGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD187260             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TGAAATCTCAGGTGATGACCCTTTTAATCAGAACGAAGTGAATATTCTACCAGAGAATGAAACTGGGAATAGCTTTTATCATGAGAGTAATAAATTTGTTGTTGATAATAAAGAGCACACATACACAGACACAAGTACGGCACAAACTTACTATCCTTTGGGTCGGTATGATGGAGATGAGGAAAGGCAGGAGATACATGAACCTCTTATTGTACCGGTCACTATACACCCGTTGAGTGACGACGATGACGATGAAGTTCTAA TCG GTAATAA C GGAGAATACAAAT CC ATGAATGAAAC TTTTTCAAACGATCTGGTCAAATGTGATGCTGTTAGTGAGTGTAATAGTCATAACACAGAATGTTATCGAGTCGATAACGCTGCCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD069638             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TGATGACCCTTTTAATCAGAACGAAGTGAATATTCTACCAGAGAATGAAACTGGGAATAGCTTTTATCATGAGAGTAATAAATTTGTTGTTGATAATAAAGAGCACACATACACAGACACAATTACGGCACAAACTTACTATCCTTTGGGTCGGTATGATGGAGATGAGGAAAGGCAGGAGATACATGAACCTCTTATTGTACCGGTCACTATACACCCGTTGAGTGACGACGATGACGATGAAGTTCTAA TCG GTAATAA C GGAGAATACAAAT CC ATGAATGAAAC TTTTTCAAACGATCTGGTCAAATGTGATGCTGTTAGTGAGTGTAATAGTCATAACACAGAATGTTATCGAGTCGATAACGCTGCCTGCTGTATATGTAGTGATGGATTTTTCGGTGCAGGAAATGCCAAGTGTTGGTCTGAAGTCAATGATCATAAATTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD069657             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TGATGACCCTTTTAATCAGAACGAAGTGAATATTCTACCAGAGAATGAAACTGGGAATAGCTTTTATCATGAGAGTAATAAATTTGTTGTTGATAATAAAGAGCACACATACACAGACACAATTACGGCACAAACTTACTATCCTTTGGGTCGGTATGATGGAGATGAGGAAAGGCAGGAGATACATGAACCTCTTATTGTACCGGTCACTATACACCCGTTGAGTGACGACGATGACGATGAAGTTCTAA TCG GTAATAA C GGAGAATACAAAT CC ATGAATGAAAC TTTTTCAAACGATCTGGTCAAATGTGATGCTGTTAGTGAGTGTAATAGTCATAACACAGAATGTTATCGAGTCGATAACGCTGCCTGCTGTATATGTAGTGATGGATTTTTCGGTGCAGGAAATGGCAAGTGTTGGTCTGAAGTCAATGATCATAAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD187328             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AAACTTACTATCCTTTGGGTCGGTATGATGGAGATGAGGAAAGGCAGGAGATACATGAACCTCTTATTGTACCGGTCACTATACACCCGTTGAGTGACGACGATGACGATGAAGTTCTAA TCG GTAATAA C GGAGAATACAAAT CC ATGAATGAAAC TTTTTCAAACGATCTGGTCAAATGTGATGCTGTTAGTGAGTGTAATAGTCATAACACAGAATGTTATCGAGTCGATAACGCTGCCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD128049             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CCTCTTATTGTACCGGTCACTATACACCCGTTGAGTGACGACGATGACGATGAAGTTCTAA TCG GTAATAA C GGAGAATACAAAT CC ATGAATGAAAC TTTTTCAAACGATCTGGTCAAATGTGATGCTGTTAGTGAGTGTAATAGTCATAACACAGAATGTTATCGAGTCGATAACGCTGCCTGCTGTATATGTAGTGATGGATTTTTCGGTGCAGGAAATGCCAAGTGTTGGTCTGAAGTCAATGATCATAAATTTTCTTTTTCTGGTTCCCTAACCGCACGCTTTGGTAGTGAGCATTCCAGTTCACCTCTGCATATTTATCTGGATATTCAACATGGTTCACTAAGACGCAGTTCTAGTGGAATTCGTGGTGGTCAGACAAACGACAGAATTTATTCAACTATACGTCTAATTACACCTGTATTCCACATTTTAAACTCGATGATTTCTAGTCCTTGTGAAAATATTCCGAAACGTGAACGTGTTTAT ATCTTTTCACG TAGGAAATGGATTAC ACGTCC TTCAAGGTGTTA TCCAGTTTGATA TGAAAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD197067             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CAACTATACGTCTAATTACGCCTGTATTCCACATTTTAAACTCGATGATTTCTAGTCCTTGTGAAAATATTCCGAAACGTGAACGTGTTTATAATCTTTTCACGTTAGGAAATGGATTACAACGTCCTTTCAAGGTGTTATTCCAGTTTGATATTGAAAGAGTTGGGAAATTTACAATCCAAGCCATACTTGAGCTACGCGATTTCACAACAGGAGCATACGCTAGTGGTGTAATAGAATTAGAGGCGTTTAGTACAGAAAATTTAAACCTACTCGATCGGTCTTATATAGAGGCTTACAGTGCTTCTGATAAGCCAGATAAAACGTATTACGCCAATTGTAAAATTGATGATCATGGCCGTATTGTATTTCCAGAGCAAACTGTTAAATTTATTGTTGAGCATCGTGACTCAAATGAAATAAGTAATTTTCCTGAAGAAATTAATGTACATTGGTCTGCTGTTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD197001             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CAACTATACGTCTAATTACACCTGTATTCCACATTTTAAACTCGATGATTTCTAGTCCTTGTGAAAATATTCCGAAACGTGAACGTGTTTATAATCTTTTCACGTTAGGAAATGGATTACAACGTCCTTTCAAGGTGTTATTCCAGTTTGATATTGAAAGAGTTGGGAAATTTACAATCCAAGCCATACTTGAGCTACGCGATTTCACAACAGGAGCATACGCTAGTGGTGTAATAGAATTAGAGGCGTTTAGTACAGAAAATTTAAACCTACTCGATCGGTCTTATATAGAGGCTTACAGTGCTTCTGATAAGCCAGATAAAACGTATTACGCCAATTATAAAATTGATGATCATGGCCGTATTGTATTTCCAGAGCAAACTGTTAAATTTATTGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD132185             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ATCCAAGCCATACTTGAGCTACGCGATTTCACAACAGGAGCATACGCTAGTGGTGTAATAGAATTAGAGGCGTTTAGTACAGAAAATTTAAACCTACTCGATCGGTCTTATATAGAGGCTTACAGTGCTTCTGATAAGCCAGATAAAACGTATTACGCCAATTATAAAATTGATGATCATGGCCGTATTGTATTTCCAGAGCAAACTGTTAAATTTATTGTTGAGCATCGTGACTCAAATGAAATAAGTAATTTTCCTGAAGAAATTAATGTACATTGGTCTGCTGTTGCTGAATCAGAAAGTTGCTTGCTCAAACAAGTCAGCTCTATACCTTAGAATTAATGGTATTATATTCGTCTTAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CD196940             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TAGTGGTGTAATAGAATTAGAGCCGTTTAGTACAGAAAATTTAAACCTACTCGATCGGTCTTATATAGAGGCTTACAGTGCTTCTGATAAGCCAGATAAAATGTATTACGCCAATTATAAAATTGATGATCATGGCCGTATTGTATTTCCAGAGCAAACTGTTAAATTTATTGTTGAGCATCGTGACTCAAATGAAATAAGTAATTTTCCTGAAGAAATTAATGTACATTGGTCTGCTGTTGCTGAATCAGAAAGTTGCTTGCTCAAACAAGTCAGCTCTATACCTAAGAATGAATGGTATTATATTCGTCTTAAAGATCGTGGTTACTGTAGTGAGGATTGTTCTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CD187140             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AGCTCTATACCTAAGAATGAATGGTATNATATTCGTCTTAAAGATCGTGGTTACTGTAATGAGGATTGTTCTGCACCAGATGGCTCTTGTAATTTATTCTGTGTAGATGAACCTTTGTTATTAGCCACAGAACCAAGTCCTTGTGATTGTGTAACATGTGATCGTCATGGTGAAGTGTGTCGACCAGAGGGCGCGAGTTATAGATGTGAATGTGGTCAGGGCTTGAAGCTAATGCCTGATAACACATGTCAAGCCACTTCACTGGTGGATGTAGCTAACTATC                                                                                                                                                                                                                                                                  ]
[-] EMBL CD186641             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TGAAGGGTATAATATTCGTCTTAAAGATCGTGGTTACTGTAGTGAGGATTGTTCTGCACCAGATGGCTCTTGTAATTTATTCTGTGTAGATGAACCTTTGTTATTAGCCACAGAACCAAGTCCTTGTGATTGTGTAACATGTGATCGTCATGGTGAAGTGTGTCGACCAGAGGGCGCGAGTTATAGATGTGAATGTGGTCAGGGCTTGAAGCTAATGCCTGATAACACATGTCAAGCCACTTCACTGGTGGATGTAGCTAACTATCTTGGTGTACAGTGTGGTTCTGTCAATTGTCATACTCATGCTCGCTGTATTGATCCAAATCAAGCGTTTTGTCAATGTTT                                                                                                                                                                                   ]
[-] EMBL CD180665             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TAATTTATTCTGTGTA ATGAACCTTTGTTATTAGCCACAGAACCAAGTCCTTGTGATTGTGTAACATGTGATCGTCATGGTGAAGTGTGTCGACCAGAGGGCGCGAGTTATAGATGTGAATGTGGTCAGGGCTTGAAGCTAATGCCTGATAACACATGTCAAGCCACTTCACTGGTGGATGTAG                                                                                                                                                                                                                                                                           ]
[+] EMBL CD185960             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GCTAATGCCTGATAACACATGTCAAGCCACTTCACTGGTGGATGTAGCTAACTATCTTGGTGTACAGTGTGGTTCTGTCAATTGTCATACTCATGCTCGCTGTATTGATCCAAATCAAGCGTTTTGTCAATGTTTACCCGGTTACAGAGGAGATGGTGTTAGCCATTGTGAAAATGATCCATGTTCTAAATGTCGTCGCAATGAGATTTGTGAAAATGGTATATGTATAGCAAGTGGTGTTGATCTATGCGAAGGGGTTCAGTGTGGAGAACAAGCTTTCTGTCAAGATGGTGCATGTGTTTGTACACCAGGCT]




>consensus_10677#0
AGCTTTACCACCTGAATCCGGTATATTTATGAGACCTTTAGGAGGTTATCAGTTGCCAAG
AAGTTCTCAAGCTGTAGAGCCAAATATATGGTTAACTGAAACAAATATAGCCCTACATGG
AGAATGGCTTGTTCCTTTATACAAATCGGAAAATATAGCTACAATAAATGTCAAGAATTT
AAGTGCAGTTGCCAGTGAATTTGTTGCATCTTTGGCAAGTATTTGCAAGGGTTCACTTCA
TTCACTTAAATCAAACAACGAAACACCATCTGATACGGTCGTCATTAAAAACGTAAACAC
TGAAAATACATCAGAAGAGCCGATTGCTAGAACACATAGTTTTAAAAGAGCTCTGGAAAA
CCTTGAAAATTATGACCTTAACGTTTCAACAAATGACTATAGTAATGGAATCACTGAAAA
TGTACCGAAAGCTGCATGGAATATCCTGAGAGATGAAGCTGAAATCTCAGGTGATGACCC
TTTTAATCAGAACGAAGTGAATATTCTACCAGAGAATGAAACTGGGAATAGCTTTTATCA
TGAGAGTAATAAATTTGTTGTTGATAATAAAGAGCACACATACACAGACACAATTACGGC
ACAAACTTACTATCCTTTGGGTCGGTATGATGGAGATGAGGAAAGGCAGGAGATACATGA
ACCTCTTATTGTACCGGTCACTATACACCCGTTGAGTGACGACGATGACGATGAAGTTCT
AATCGGTAATAACGGAGAATACAAATCCATGAATGAAACTTTTTCAAACGATCTGGTCAA
ATGTGATGCTGTTAGTGAGTGTAATAGTCATAACACAGAATGTTATCGAGTCGATAACGC
TGCCTGCTGTATATGTAGTGATGGATTTTTCGGTGCAGGAAATGCCAAGTGTTGGTCTGA
AGTCAATGATCATAAATTTTCTTTTTCTGGTTCCCTAACCGCACGCTTTGGTAGTGAGCA
TTCCAGTTCACCTCTGCATATTTATCTGGATATTCAACATGGTTCACTAAGACGCAGTTC
TAGTGGAATTCGTGGTGGTCAGACAAACGACAGAATTTATTCAACTATACGTCTAATTAC
ACCTGTATTCCACATTTTAAACTCGATGATTTCTAGTCCTTGTGAAAATATTCCGAAACG
TGAACGTGTTTATATCTTTTCACGTAGGAAATGGATTACACGTCCTTCAAGGTGTTATCC
AGTTTGATATGAAAGAGTTGGGAAATTTACAATCCAAGCCATACTTGAGCTACGCGATTT
CACAACAGGAGCATACGCTAGTGGTGTAATAGAATTAGAGGCGTTTAGTACAGAAAATTT
AAACCTACTCGATCGGTCTTATATAGAGGCTTACAGTGCTTCTGATAAGCCAGATAAAAC
GTATTACGCCAATTATAAAATTGATGATCATGGCCGTATTGTATTTCCAGAGCAAACTGT
TAAATTTATTGTTGAGCATCGTGACTCAAATGAAATAAGTAATTTTCCTGAAGAAATTAA
TGTACATTGGTCTGCTGTTGCTGAATCAGAAAGTTGCTTGCTCAAACAAGTCAGCTCTAT
ACCTAAGAATGAATGGTATTATATTCGTCTTAAAGATCGTGGTTACTGTAGTGAGGATTG
TTCTGCACCAGATGGCTCTTGTAATTTATTCTGTGTAGATGAACCTTTGTTATTAGCCAC
AGAACCAAGTCCTTGTGATTGTGTAACATGTGATCGTCATGGTGAAGTGTGTCGACCAGA
GGGCGCGAGTTATAGATGTGAATGTGGTCAGGGCTTGAAGCTAATGCCTGATAACACATG
TCAAGCCACTTCACTGGTGGATGTAGCTAACTATCTTGGTGTACAGTGTGGTTCTGTCAA
TTGTCATACTCATGCTCGCTGTATTGATCCAAATCAAGCGTTTTGTCAATGTTTACCCGG
TTACAGAGGAGATGGTGTTAGCCATTGTGAAAATGATCCATGTTCTAAATGTCGTCGCAA
TGAGATTTGTGAAAATGGTATATGTATAGCAAGTGGTGTTGATCTATGCGAAGGGGTTCA
GTGTGGAGAACAAGCTTTCTGTCAAGATGGTGCATGTGTTTGTACACCAGGCT

consensusID : consensus_10677#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 140
fasta sequence

                              [TGAAACTGGGAATAGCTTTTATCATGAGAGTAATAAATTTGTTGTTGATAATAAAGAGCACACATACACAGACACAATTACGGCACAAACTTACTATCCTTTGGGTGGGTATGATGGAGATGAGGTAAGAGNACCNNGAT]

[-] EMBL CD067681             [TGAAACTGGGAATAGCTTTTATCATGAGAGTAATAAATTTGTTGTTGATAATAAAGAGCACACATACACAGACACAATTACGGCACAAACTTACTATCCTTTGGGTGGGTATGATGGAGATGAGGTAAGAGNACCNNGAT]




>consensus_10677#1
TGAAACTGGGAATAGCTTTTATCATGAGAGTAATAAATTTGTTGTTGATAATAAAGAGCA
CACATACACAGACACAATTACGGCACAAACTTACTATCCTTTGGGTGGGTATGATGGAGA
TGAGGTAAGAGNACCNNGAT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10677#0      AGCTTTACCACCTGAATCCGGTATATTTATGAGACCTTTAGGAGGTTATCAGTTGCCAAG 60
consensus_10677#1      ------------------------------------------------------------
                                                                                   

consensus_10677#0      AAGTTCTCAAGCTGTAGAGCCAAATATATGGTTAACTGAAACAAATATAGCCCTACATGG 120
consensus_10677#1      ------------------------------------------------------------
                                                                                   

consensus_10677#0      AGAATGGCTTGTTCCTTTATACAAATCGGAAAATATAGCTACAATAAATGTCAAGAATTT 180
consensus_10677#1      ------------------------------------------------------------
                                                                                   

consensus_10677#0      AAGTGCAGTTGCCAGTGAATTTGTTGCATCTTTGGCAAGTATTTGCAAGGGTTCACTTCA 240
consensus_10677#1      ------------------------------------------------------------
                                                                                   

consensus_10677#0      TTCACTTAAATCAAACAACGAAACACCATCTGATACGGTCGTCATTAAAAACGTAAACAC 300
consensus_10677#1      ------------------------------------------------------------
                                                                                   

consensus_10677#0      TGAAAATACATCAGAAGAGCCGATTGCTAGAACACATAGTTTTAAAAGAGCTCTGGAAAA 360
consensus_10677#1      ------------------------------------------------------------
                                                                                   

consensus_10677#0      CCTTGAAAATTATGACCTTAACGTTTCAACAAATGACTATAGTAATGGAATCACTGAAAA 420
consensus_10677#1      ------------------------------------------------------------
                                                                                   

consensus_10677#0      TGTACCGAAAGCTGCATGGAATATCCTGAGAGATGAAGCTGAAATCTCAGGTGATGACCC 480
consensus_10677#1      ------------------------------------------------------------
                                                                                   

consensus_10677#0      TTTTAATCAGAACGAAGTGAATATTCTACCAGAGAATGAAACTGGGAATAGCTTTTATCA 540
consensus_10677#1      ------------------------------------TGAAACTGGGAATAGCTTTTATCA 24
                                                           ************************

consensus_10677#0      TGAGAGTAATAAATTTGTTGTTGATAATAAAGAGCACACATACACAGACACAATTACGGC 600
consensus_10677#1      TGAGAGTAATAAATTTGTTGTTGATAATAAAGAGCACACATACACAGACACAATTACGGC 84
                       ************************************************************

consensus_10677#0      ACAAACTTACTATCCTTTGGGTCGGTATGATGGAGATGAGGAAAGGCAGGAGATACATGA 660
consensus_10677#1      ACAAACTTACTATCCTTTGGGTGGGTATGATGGAGATGAGGTAAG--AGNACCNNGAT-- 140
                       ********************** ****************** ***  ** *     **  

consensus_10677#0      ACCTCTTATTGTACCGGTCACTATACACCCGTTGAGTGACGACGATGACGATGAAGTTCT 720
consensus_10677#1      ------------------------------------------------------------
                                                                                   

consensus_10677#0      AATCGGTAATAACGGAGAATACAAATCCATGAATGAAACTTTTTCAAACGATCTGGTCAA 780
consensus_10677#1      ------------------------------------------------------------
                                                                                   

consensus_10677#0      ATGTGATGCTGTTAGTGAGTGTAATAGTCATAACACAGAATGTTATCGAGTCGATAACGC 840
consensus_10677#1      ------------------------------------------------------------
                                                                                   

consensus_10677#0      TGCCTGCTGTATATGTAGTGATGGATTTTTCGGTGCAGGAAATGCCAAGTGTTGGTCTGA 900
consensus_10677#1      ------------------------------------------------------------
                                                                                   

consensus_10677#0      AGTCAATGATCATAAATTTTCTTTTTCTGGTTCCCTAACCGCACGCTTTGGTAGTGAGCA 960
consensus_10677#1      ------------------------------------------------------------
                                                                                   

consensus_10677#0      TTCCAGTTCACCTCTGCATATTTATCTGGATATTCAACATGGTTCACTAAGACGCAGTTC 1020
consensus_10677#1      ------------------------------------------------------------
                                                                                   

consensus_10677#0      TAGTGGAATTCGTGGTGGTCAGACAAACGACAGAATTTATTCAACTATACGTCTAATTAC 1080
consensus_10677#1      ------------------------------------------------------------
                                                                                   

consensus_10677#0      ACCTGTATTCCACATTTTAAACTCGATGATTTCTAGTCCTTGTGAAAATATTCCGAAACG 1140
consensus_10677#1      ------------------------------------------------------------
                                                                                   

consensus_10677#0      TGAACGTGTTTATATCTTTTCACGTAGGAAATGGATTACACGTCCTTCAAGGTGTTATCC 1200
consensus_10677#1      ------------------------------------------------------------
                                                                                   

consensus_10677#0      AGTTTGATATGAAAGAGTTGGGAAATTTACAATCCAAGCCATACTTGAGCTACGCGATTT 1260
consensus_10677#1      ------------------------------------------------------------
                                                                                   

consensus_10677#0      CACAACAGGAGCATACGCTAGTGGTGTAATAGAATTAGAGGCGTTTAGTACAGAAAATTT 1320
consensus_10677#1      ------------------------------------------------------------
                                                                                   

consensus_10677#0      AAACCTACTCGATCGGTCTTATATAGAGGCTTACAGTGCTTCTGATAAGCCAGATAAAAC 1380
consensus_10677#1      ------------------------------------------------------------
                                                                                   

consensus_10677#0      GTATTACGCCAATTATAAAATTGATGATCATGGCCGTATTGTATTTCCAGAGCAAACTGT 1440
consensus_10677#1      ------------------------------------------------------------
                                                                                   

consensus_10677#0      TAAATTTATTGTTGAGCATCGTGACTCAAATGAAATAAGTAATTTTCCTGAAGAAATTAA 1500
consensus_10677#1      ------------------------------------------------------------
                                                                                   

consensus_10677#0      TGTACATTGGTCTGCTGTTGCTGAATCAGAAAGTTGCTTGCTCAAACAAGTCAGCTCTAT 1560
consensus_10677#1      ------------------------------------------------------------
                                                                                   

consensus_10677#0      ACCTAAGAATGAATGGTATTATATTCGTCTTAAAGATCGTGGTTACTGTAGTGAGGATTG 1620
consensus_10677#1      ------------------------------------------------------------
                                                                                   

consensus_10677#0      TTCTGCACCAGATGGCTCTTGTAATTTATTCTGTGTAGATGAACCTTTGTTATTAGCCAC 1680
consensus_10677#1      ------------------------------------------------------------
                                                                                   

consensus_10677#0      AGAACCAAGTCCTTGTGATTGTGTAACATGTGATCGTCATGGTGAAGTGTGTCGACCAGA 1740
consensus_10677#1      ------------------------------------------------------------
                                                                                   

consensus_10677#0      GGGCGCGAGTTATAGATGTGAATGTGGTCAGGGCTTGAAGCTAATGCCTGATAACACATG 1800
consensus_10677#1      ------------------------------------------------------------
                                                                                   

consensus_10677#0      TCAAGCCACTTCACTGGTGGATGTAGCTAACTATCTTGGTGTACAGTGTGGTTCTGTCAA 1860
consensus_10677#1      ------------------------------------------------------------
                                                                                   

consensus_10677#0      TTGTCATACTCATGCTCGCTGTATTGATCCAAATCAAGCGTTTTGTCAATGTTTACCCGG 1920
consensus_10677#1      ------------------------------------------------------------
                                                                                   

consensus_10677#0      TTACAGAGGAGATGGTGTTAGCCATTGTGAAAATGATCCATGTTCTAAATGTCGTCGCAA 1980
consensus_10677#1      ------------------------------------------------------------
                                                                                   

consensus_10677#0      TGAGATTTGTGAAAATGGTATATGTATAGCAAGTGGTGTTGATCTATGCGAAGGGGTTCA 2040
consensus_10677#1      ------------------------------------------------------------
                                                                                   

consensus_10677#0      GTGTGGAGAACAAGCTTTCTGTCAAGATGGTGCATGTGTTTGTACACCAGGCT 2093
consensus_10677#1      -----------------------------------------------------