cluster # 10682

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 10682 cluster # 10682 Sequences # 20 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10682#0 length = 1381 sequences # 19

consensus_10682#1 length = 263 sequences # 1

consensusID : consensus_10682#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 19
consensus length = 1381
fasta sequence

                              [GGTAGGCAATGAAACCATATATATACTCTCCTTGTTCATTCATTAGCTCCTTTTCAAATACATATGAATAATATTAACGATTTGATAATATACACACCTATGTGTATATGTTAATATAAGATAACTGATGAAATTAAAAGATACGAGTTAACCAGAAAAAGAAAACATTAAACGCATATAAATCATGAGATCAAAATTGTGTTAACAACAAAAAAGCAACTGGAAAAGAACATTGAATAGTAAAGGAAAAGTAAAACATGTGTACAATGGGGCAACAAAGAAACAAAACAGATAAGGCATAAAATATCAGATGAGATAATAATTTAGGTAAGAATAACTTGTTATCTTTTTGTCATTTAAAAGAAAGGAAAAATTCAAAAAAGAGATTGTGTTTACCATTAGTGTAACTCGATGAAATAATGACAACAAAATATCTGTTCGAAGATGGAGTGTAATACAGAGAGAGAGAGAGAGAGAGAG---G-GAGGGAGGGAGAGAGCAAGAGAAGTTAGGAAAGATAACAGTTCTGTTTTACATATTTAATTTGATTCAAAGTTCCCATTGATTATGACATTCGAATTATGATTAACCATTATATACTGTATTCAACTGAACATTAGATCTATCTGATTTACTTCCTTTCTCTTTGTAAATAATAATCACAATAGTAATAGGATTTGAACAGTTACTGTTCAAGAAAGAAATTCATTGTGATTGGACATTGAATAGGGAACATTCTTCTCCTTGTATTATAGATGTGAGTGCAAAAAGAAAATGTGTCAAATAAATAAATGATATTGAAGACTGTTCAAGACGTGGTTGTTTTATTTGTTACTGGAGCTGTAGCACTTGTTACAGGAGTTGTATTAGTAATATTCAAACTAACAGAAGGTACCTGAGGAGCTCGTTTCTTTTGTGATGCTGTAGTGGGAGGTCCAACAGAAGTATTACTACTATGT-GGAACTACATTACTGACATTAGTACTAGTAGGAGCATTATTTATAGTGATGGAACAATCTAATCCGAGATCAGATGATGATGATAATA-TTTCGGTTGTTTTGATACCACCACTTTTATCTGAGTTAGAA-TTAGACAATTCTAATTGAGTTCTTTGTGTATCTTTGAGATT-TCG-TTCAGAAATA-TTTGTAGGCGTAGCTCTGTCCTCTATTTGTTCTACTCCATCACAATCGTTAGTAATAGCTGTTTCATTAAATCCGTCATCTGGATAACAAATATCTTGACCTTCAAATTTCGCACGAGCTCTATTTGCTGCAACAACAGCAGCGGTTTCCATTGCTAGTACTCTAGGAGCTGGTCCAATACTAGCCGCTGCAATTGGTACGTTAGCACGAAAACGTTGTACAAGTTGGGTTAATTCTTTAGC]

[-] EMBL CD069547             [GGTAGGCAATGAAACCATATATATACTCTCCTTGTTCATTCATTAGCTCCTTTTCAAATACATATGAATAATATTAACGATTTGATAATATACACACCTATGTGTATATGTTAATATAAGATAACTGATGAAATTAAAAGATACGAGTTAACCAGAAAAAGAAAACATTAAACGCATATAAATCATGAGATCAAAATTGTGTTAACAACAAAAAAGCAACTGGAAAAGAACATTGAATAGTAAAGGAAAAGTAAAACATGTGTACAATGGGGCAACAAAGAAACAAAACAGATAAGGCATAAAATATCAGATGAGATAATAATTTAGGTAAGAATAACTTGTTATCTTTTTGTCATTTAAAAGAAAGGAAAAATTCAAAAAAGAGATTGTGTTTACCATTAGTGTAACTCGATGAAATAATGACAACAAAATATCTGTTCGAAGATGGAGTGTAATACAGAGAGAGAGAGAGAGAGAGAG   G GAGGGAGGGAGAGAGCAAGAGAAGTTAGGAAAGATAACAGTTCTGTTTTACATATTTAATTTGATTCAAAGTTCCCATTGATTATGACATTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD196669             [                                                                                                                                                                                                      GTTTTAACAACAAAAAAACAACTGGAAAAGAACATTGAATAGTAAAGGAAAAGTAAAACATGTGTACAATGGGGCAACAAAGAAACAAGACAGATAAGGCATAAAATATCAGATGAGATAATAATTTAGGTAAGAATAACTTGTTATCTTTTTGTCATTTAAAAGAAAGGAAAAATTCAAAAAAGAGATTGTGTTTACCATTAGTGTAACTCGATGAAATAATGACAACAAAATATCTGTTCGAAGATGGAGTGTAATACAGAGAGAGAGAGAGAGAGAGAGAGAGTGAGGGAGGGAGAGAGCAAGAGAAGTTAGGAAAGATAACAGTTCTGTTTTACATATTTAATTTGATTCAAAGTTCCCATTGATTATGACATTCGAATTATGATTAACCATTATATACTGTATTCAACTGAACATTAGATCTATCTGATTTACTTCCTTTCTCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD169612             [                                                                                                                                                                                                                                              AGTAAAGGAAAAGTAAAACATGTGTACAATGGGGCAACAAAGAAACAAAACAGATAAGGCATAAAATATCAGATGAGATAATAATTTAGGTAAGAATAACTTGTTATCTTTTTGTCATTTAAAAGAAAGGAAAGATTCAAAAAAGAGATTGTGTTTACCATTAGTGTAACTCGATGAAATAATGACAACAAAATATCTGTTCGAAGATGGAGTGTAATAC  AGAGAGAGAGAGAGAGAGAG   G GAGGGAGGGAGAGAGCAAGAGAAGTTAGGAAAGATAACAGTTCTGTTCTACATATTTAATTTGATTCAAAGTTCCCATTGATTATGACATTCGAATTATGATTAACCATTATATACTGTATTCAACTGAACATTAGATCTATCTGATTTACTTCCTTTCTCTTTGTAAATAATAATCACAATAGTAATAGGATTTGAACAGTTACTGTTCAAGAAAGAAATTCATTGTGATTGGACATTGAATAGGGAACATTCTTCTCCTTGTATTATAGATGTGAGTGC AAAAGAAAATGTGTCAAATAAATAAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD095613             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AGAGAG   G GAGGGAGGGAGAGAGCAAGAGAAGTTAGGAAAGATAACAGTTCTGTTTTACATATTTAATTTGATTCAAAGTTCCCATTGATTATGACATTCGAATTATGATTAACCATTATATACTGTATTCAACTGAACATTAGATCTATCTGATTTACTTCCTTTCTCTTTGTAAATAATAATCACAATAGTAATAGGATTTGAACAGTTACTGTTCAAGAAAGAAATTCATTGTGATTGGACATTGAATAGGGAACATTCTTCTCCTTGTATTATAGATGTGAGTGCAAAAAGAAAATGTGTCAAATAAATAAATGATATTGAAGACTGTTCAAGACGTGGTTGTTTTATTTGTTACTGGAGCTGTAGCACTTGTTACAGGAGTTGTATTAGTAATATTCAAACTAACAGAAGGTACCTGAGGAGCTCGTTTCTTTTGTGATGCTGTAGTGGGAGGTCCAACAGAAGTATTACTACTATGT GGAACTACATTACTGACATTAGTACTAGTAGGAGCATTATTTATAGTGATGGAACAATCTAATCCGAGATCAGATGATGATGATAATATTTTCGG TGGTCTGATACCACCACTTTTATCTGAGTTAGAA TTAGACAATTCTCATTGAGTTCCTTGTGGATCTTCGAGATTCTCG  TCAAAAATA TTTGTgg                                                                                                                                                                                                                                           ]
[+] EMBL CD095669             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GAGAAGTTAGGAAAGATAACAGTTCTGTTTTACATATTTAATTTGATTCAAAGTTCCCATTGATTATGACATTCGAATTATGATTAACCATTATATACTGTATTCAACTGAACATTAGATCTATCTGATTTACTTCCTTTCTCTTTGTAAATAATAATCACAATAGTAATAGGATTTGAACAGTTACTGTTCAAGAAAGAAATTCATTGTGATTGGACATTGAATAGGGAACATTCTTCTCCTTGTATTATAGATGTGAGTGCAAAAAGAAAATGTGTCAAATAAATAAATGATATTGAAGACTGTTCAAGACGTGGTTGTTTTATTTGTTACTGGAGCTGTAGCACTTGTTACAGGAGTTGTATTAGTAATATTCAAACTAACAGAAGGTACCTGAGGTGCTCGTTTCTTTTGTGATGCTGTAGTGGGAGGTCCAACAGAAGTATTACTACTATGT GGAACTACATTACTGACATTAGTACTAGTAGGAGCATTATTTATATTGATGGAACAATCTAATCCGAGATCAGATGATGATGANTATA TTTCGGTTGTTTTGATACCACCACTTTTATC                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD146980             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GAGAAGTTAGGAAAGATAACAGTTCTGTTTTACATATTTAATTTGATTCAAAGTTCCCATTGATTATGACATTCGAATTATGATTAACCATTATATACTGTATTCAACTGAACATTAGATCTATCTGATTTACTTCCTTTCTCTTTGTAAATAATAATCACAATAGTAATAGGATTTGAACAGTTACTGTTCAAGAAAGAAATTCATTGTGATTGGACATTGAATAGGGAACATTCTTCTCCTTGTATTATAGATGTGAGTGCAAAAAGAAAATGTGTCAAATAAATAAATGATATTGAAGACTGTTCAAGACGTGGTTGTTTTATTTGTTACTGGAGCTGTAGCACTTGTTACAGGAGTTGTATTAGTAATATTCAAACTAACAGAAGGTACCTGAGGAGCTCGTTTCTTTTGTGATGCTGTAGTGGGAGGTCCAACAGAAGTATTACTACTATGTNGGAACTACATTACT                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD095903             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GTTAGGAAAGATAACAGTTCTGTTTTACATATTTAATTTGATTCAAAGTTCCCATTGATTATGACATTCGAATTATGATTAACCATTATATACTGTATTCAACTGAACATTAGATCTATCTGATTTACTTCCTTTCTCTTTGTAAATAATAATCACAATAGTAATAGGATTTGAACAGTTACTGTTCAAGAAAGAAATTCATTGTGATTGGACATTGAATAGGGAACATTCTTCTCCTTGTATTATAGATGTGAGTGCAAAAAGAAAATGTGTCAAATAAATAAATGATATTGAAGACTGTTCAAGACGTGGTTGTTTTATTTGTTACTGGAGCTGTAGCACTTGTTACAGGAGTTGTATTAGTAATATTCAAACTAACAGAAGGTACCTGAGGAGCTCGTTTCTTTTGTGATGCTGTAGTGGGAGGTCCAACAGAAGTATTACTACTATGT GGAACTACATTACTGACATTAGTACTAGTAGGAGCATTATTTATAGTGATGGAACAATCTAATCCGAGATCAGATGATGATGANTATA TTTCGGTTGGTTTGATACCACCACTTTTATCTGAGTTAGAATTTAGAC ATTCTAATTGAGTTCTTTGNGTATCTTTGAGATT TCG NTCAG AATA TTTTGAGG                                                                                                                                                                                                                                          ]
[+] EMBL CD148274             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AGGAAAGATAACAGTTCTGTTTTACATATTTAATTTGATTCAAAGTTCCCATTGATTATGACATTCGAATTATGATTAACCATTATATACTGTATTCAACTGAACATTAGATCTATCTGATTTACTTCCTTTCTCTTTGTAAATAATAATCACAATAGTAATAGGATTTGAACAGTTACTGTTCAAGAAAGAAATTCATTGTGATTGGACATTGAATAGGGAACATTCTTCTCCTTGTATTATAGATGTGAGTGCAAAAAGAAAATGTGTCAAATAAATAAATGATATTGAAGACTGTTCAAGACGTGGTTGTTTTATTTGTTACTGGAGCTGTAGCACTTGTTACAGGAGTTGTATTAGTAATATTCAAACTAACAGAAGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD095998             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GATAACAGTTCTGTTTTACATATTTAATTTGATTCAAAGTTCCCATTGATTATGACATTCGAATTATGATTAACCATTATATACTGTATTCAACTGAACATTAGATCTATCTGATTTACTTCCTTTCTCTTTGTAAATAATAATCACAATAGTAATAGGATTTGAACAGTTACTGTTCAAGAAAGAAATTCATTGTGATTGGACATTGAATAGGGAACATTCTTCTCCTTGTATTATAGATGTGAGTGCAAAAAGAAAATGTGTCAAATAAATAAATGATATTGAAGACTGTTCAAGACGTGGTTGTTTTATTTGTTACTGGAGCTGTAGCACTTGTTACAGGAGTTGTATTAGTAATATTCAAACTAACAGAAGGTACCTGAGGAGCTCGTTTCTTTTGTGATGCTGTAGTGGGAGGTCCAACAGAAGTATTACTACTATGT GGAACTACATTACTGACATTAGTACTAGTAGGAGCATTATTTATAGTGATGGAACAATCTAATCCGAGATCAGATGATGATGATAATA TTTCGGNTGTTTTGATACCACCACTTTTATCTGAGTTAGAA TTAGACAATTCTAATTGAGTTCTTTGNGTATCTTTGAGATT TCGNTCCAG AATA TTTGTAng                                                                                                                                                                                                                                          ]
[+] EMBL CD095849             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GATAACAGTTCTGTTTTACATATTTAATTTGATTCAAAGTTCCCATTGATTATGACATTCGAATTATGATTAACCATTATATACTGTATTCAACTGAACATTAGATCTATCTGATTTACTTCCTTTCTCTTTGTAAATAATAATCACAATAGTAATAGGATTTGAACAGTTACTGTTCAAGAAAGAAATTCATTGTGATTGGACATTGAATAGGGAACATTCTTCTCCTTGTATTATAGATGTGAGTGCAAAAAGAAAATGTGTCAAATAAATAAATGATATTGAAGACTGTTCAAGACGTGGTTGTTTTATTTGTTACTGGAGCTGTAGCACTTGTTACAGGAGTTGTATTAGTAATATTCAAACTAACAGAAGGTACCTGAGGAGCTCGTTTCTTTTGTAATGCTGTAGTGGGAGGTCCAACAGAAGTATTACTACTATGT GGAACTACATTACTGACATTAGTACTAGTAGGAGCATTATTTATAGTGATGGAACAATCTAATCCGAGATCAGATGATGATGATAATA TTTCGGGTGTTTTGATACCACCACTTTTATCTGAGTTAGAA T                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD096005             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GATAACAGTTCTGTTTTACATATTTAATTTGATTCAAAGCTCCCATTGATTATGACATTCGAATTATGATTAACCATTATATACTGTATTCAACTGAACATTAGATCTATCTGATTTACTTCCTTTCTCCTTGTAAATAACAATCACAATAGTAATAGGATTTGAACAGTTACTGTTCAAGAAAGAAATTCATTGTGATTGGACATTGAATAGGGAACATTCTTCTCCTTGTATTATAGATGTGAGTGCAAAAAGAAAATGTGTCAAATAAATAAATGATATTGAAGACTGTTCAAGACGTGGTTGTTTTATTTGTTACTGGAGCTGTAGCACTTGTTACGGGAGTTGTATTAGTAATATTCAAACTAACAGAAGGTACCTGAGGAGCTCGTTTCTTTTGTGATGCTGTAGTGGGAGGTCCAACAGAAGTATTACTACTATGT GGAACTACATTACTGACATTAGTACTAGTAGGAGCATTATTTATAGTGATGGAACAATCTAATCCGAGATCAGATGATGATGANTATA TTTCGGTTGGTTTGATACCACCACTTTTATCTGA                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD095795             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GATAACAGTTCTGTTTTACATATTTAATTTGATTCAAAGTTCCCATTGATTATGACATTCGAATTATGATTAACCATTATATACTGTATTCAACTGAACATTAGATCTATCTGATTTACTTCCTTTCTCTTTGTAAATAATAATCACAATAGTAATAGGATTTGAACAGTTACTGTTCAAGAAAGAAATTCATTGTGATTGGACATTGAATAGGGAACATTCTTCTCCTTGTATTATAGATGTGAGTGCAAAAAGAAAATGTGTCAAATAAATAAATGATATTGAAGACTGTTCAAGACGCGGTTGTTTTATTTGTTACTGGAGCTGTAGCACTTGTTACAGGAGTTGTATTAGTAATATTCAAACTAACAGAAGGTACCTGAGGAGCTCGCTTCTTTTGTGATGCTGTAGTGGGAGGTCCAACAGAAGTATTACTACTATGT GGAACTACATTACTGACATTAGTACTAGTAGGAGCATTATTTATAGTGATGGAACAATCTAATCCGAGATCAGATGATGATGATAATA TTTCGGTTGTTTTGATACCACCACTTTTATCTGAGTTAGAA TTAGACAATTCTAATTGAGTTCTTTGTGTATCTTTGAGATT TCG TTCAGAAATA TTTGTAGG                                                                                                                                                                                                                                          ]
[+] EMBL CD096070             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GATAACAGTTCTGTTTTACATATTTAATTTGATTCAAAGTTCCCATTGATTATGACATTCGAATTATGATTAACCATTATATACTGTATTCAACTGAACATTAGATCTATCTGATTTACTTCCTTTCTCTTTGTAAATAATAATCACAATAGTAATAGGATTTGAACAGTTACTGTTCAAGAAAGAAATTCATTGTGATTGGACATTGAATAGGGAACATTCTTCTCCTTGTATTATAGATGTGAGTGCAAAAAGAAAATGTGTCAAATAAATAAATGATATTGAAGACTGTTCAAGACGTGGTTGTTTTATTTGTTACTGGAGCTGTAGCACTTGTTACAGGAGTTGTATTAGTAATATTCAAACTAACAGAAGGTACCTGAGGAGCTCGTTTCTTTTGTGATGCTGTAGTGGGAGGTCCAACAGAAGTATTACTACTATGT GGAACTACATTACTGACATTAGTACTAGTAGGAGCATTATTTATAGTGATGGAACAATCTAATCCGAGATCAGATGATGATGATAATA TTTCGGNTGGTNTGATACCACCACTTTTATCTGAGTTAGAA TTTGACANTTCTAATTGAGNTCTTTGNGTATCTTTGAGATT TCG TTCAGAAATACTTTGTAG                                                                                                                                                                                                                                           ]
[-] EMBL CD095783             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TTGATTATGACATTCGAATTATGATTAACCATTATATACTGTATTCAACTGAACATTAGATCTATCTGATTTACTTCCTNTCTCTNTGTAAATAATAATCACAATAGTAATAGGATNTGAACAGTTACTGTTCAAGAAAGAAATTCATTGTGATTGGACATTGAATCGGGAACATTCTTCTCCTTGTATTATAGATGTGAGTGCAAAAAGAAAATGTGTCAAATAAATAAATGATATTGAAGACTGTTCAAGACGTGGTTGTTTTATTTGTTACTGGAGCTGTAGCACTTGTTACAGGAGTTGTATTAGTAATATTCAAACTAACAGAAGGTACCTGAGGAGCTCGTTTCTTTTGTGATGCTGTAGTGGGAGGTCCAACAGAAGTATTACTACTATGT GGAACTACATTACTGACATTAGTACTAGTAGGAGCATTATTTATAGTGATGGAACAATCTAATCCGAGATCGGATGATGATGATAATA TTTCGGTTGTTTTGATACCACCACTTTTATCTGAGTTAGAA TTAGACAATTCTAATTGAGTTCTTTGTGTATCTTTGAGATT TCG TTCAGAAATA TTTGTAGGC                                                                                                                                                                                                                                         ]
[-] EMBL CD095782             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ATGATTAACCATTATATACTGTATTCAACTGAACATTAGATCTATCTGATTTACTTCCTTTCTCTNTGTAAATAATAATCACAATAGTAATAGGATNTGAACAGTTACTGTTCAAGAAAGAAATTCATTGTGATTGGACATTGAATAGGGAACATTCTTCTCCTTGTATTATAGATGTGAGTGCAAAAAGAAAATGTGTCAAATAAATAAATGATATTGAAGACTGTTCAAGACGTGGTTGTTTTATTTGTTACTGGAGCTGTAGCACTTGTTACAGGAGTTGTATTAGTAATATTCAAACTAACAGAAGGTACCTGAGGAGCTCGTTTCTTTTGTGATGCTGTAGTGGGAGGTCCAACAGAAGTATTACTACTATGT GGAACTACATTACTGACATTAGTACTAGTAGGAGCATTATTTATAGTGATGGAACAATCTAATCCGAGATCAGATGATGATGATAATA TTTCGGTTGTTTTGATACCACCACTTTTATCTGAGTTAGAA TTAGACAATTCTAATTGAGTTCTTTGCGTATCTTTGAGATT TCG TTCAGAAATA TTTGTAGGC                                                                                                                                                                                                                                         ]
[-] EMBL CD095961             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TATTCANCTGACCATTAGATCTATCTGATTTACTTCCTTTCTCTTTGTAAATAATAATCACAATAGTAATAGGATTTGAACAGTTACTGTTCAAGAAAGAAATTCATTGTGATTGGACATTGAATAGGGAACATTCTTCTCCTTGTATTATAGGTGTGAGTGCAAAAAGAAAATGTGTCAAATAAATAAATGATATTGAAGACTGTTCAAGACGTGGTTGTTTTATTTGTTACTGGAGCTGTAGCACTTGTTACAGGAGTTGTATTAGTAATATTCAAACTAACAGAAGGTACCTGAGGAGCTCGTTTCTTTTGTGATGCTGTAGTGGGAGGTCCAACAGAAGTATTACTACTATGT GGAACTACATTACTGACATTAGTACTAGTAGGAGCATTATTTATAGTGATGGAACAATCTAATCCGAGATCAGATGATGATGATAATA TTTCGGTTGTTTTGATACCACCACTTTTATCTGAGTTAGAA TTAGACAATTCTAATTGAGTTCTTGGTGTATCTTTGAGATT TCG TTCAGAAATA TTTGTAGGC                                                                                                                                                                                                                                         ]
[-] EMBL CD154618             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TAAATAAATGATATGAAAGACTGTTCAAGACGTGGTTGTTTTATTTGTTACTGGAGCTGTAGCACTTGTTACAGGAGTTGTATTAGTAATATTCAAACTAACAGAAGGTACCTGAGGAGCTCGTTTCTTTTGTGATGCTGTAGTGGGAGGTCCAACAGAAGTATTACTACTATGT GGAACTACATTACTGACATTAGTACTAGTAGGAGCATTATTTATAGTGACGGAACAATCTAATCCGAGATCAGATGATGATGATAATA TTTCGGTTGTTTTGATACCACCACTTTTATCTGAGTTAGAA TTAGACAATTCTAATTGAGTTCTTTGTGTATCTTTGAGATT TCG TTCAGAAATA TTTGTAGGCGTAGCTCTGTCCTCTATTTGTTCTACTCCATCACAATCGTTAGTAATAGCTGTTTCATTAAATCCGTCATCTGGATAACAAATATCTTGACCTTCAAATTTCGCACGAGCTCTATTTGCTGCAACAACAGCAGCGGTTTCCATTGCTAGTACTCTAGGAGCTGGTCCAATACTAGCCGCTGCAATTGGTACGTTAGCACGAAAACGTTGTACAAGTTGGGTTAATTCTTTAGC]
[-] EMBL CD096057             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TGTTACTGGAGCTGTAGCACTTGTTACAGGAGTTGTATTTGTAATATTCAAACTAACAGAAGGTACCTGAGGAGCTCGTTTCTTTTGTGATGCTGTAGTGGGAGGTCCAACAGAAGTATTACTACTATGT GGAACTACATTACTGACATNNGTANTAGTAAGAGCATTNNNT TTNNNATGGAACAATCTAATCCTAGATCAGATGATGATGATAATA TTTCGGTTGTTTTGATACCACCACTTTTATCTGAGTTAGAA TTAGACAATTCTAATTGAGTTCTTTGTGTATCTTTGAGATT TCG TTCAGAAATA TTTGTAGGC                                                                                                                                                                                                                                         ]
[-] EMBL CD178176             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ATCCGAGATCAGATGATGATGATAATA TTTCGGTCGTTTTGACACCACCACTTTTATCTGAGTTAGAA TTAGACAATTCTAATTGAGTTCTTTGTGTATCTTTGAGATT TCG TTCAGAAATA TTTGTAGGCGTAGCTCTGTCCTCTATTTGTTCTACTCCATCACAATCGTTAGTAATAGCTGTTTCATTAAATCCGTCATCTGGATAACAAATATCTTGACCTTCAAATTTTGCACGAGCTCTATTTGCTGCAACAGCAGCAGCGGCTTCCATTGCTAGTA                                                                                  ]




>consensus_10682#0
GGTAGGCAATGAAACCATATATATACTCTCCTTGTTCATTCATTAGCTCCTTTTCAAATA
CATATGAATAATATTAACGATTTGATAATATACACACCTATGTGTATATGTTAATATAAG
ATAACTGATGAAATTAAAAGATACGAGTTAACCAGAAAAAGAAAACATTAAACGCATATA
AATCATGAGATCAAAATTGTGTTAACAACAAAAAAGCAACTGGAAAAGAACATTGAATAG
TAAAGGAAAAGTAAAACATGTGTACAATGGGGCAACAAAGAAACAAAACAGATAAGGCAT
AAAATATCAGATGAGATAATAATTTAGGTAAGAATAACTTGTTATCTTTTTGTCATTTAA
AAGAAAGGAAAAATTCAAAAAAGAGATTGTGTTTACCATTAGTGTAACTCGATGAAATAA
TGACAACAAAATATCTGTTCGAAGATGGAGTGTAATACAGAGAGAGAGAGAGAGAGAGAG
GGAGGGAGGGAGAGAGCAAGAGAAGTTAGGAAAGATAACAGTTCTGTTTTACATATTTAA
TTTGATTCAAAGTTCCCATTGATTATGACATTCGAATTATGATTAACCATTATATACTGT
ATTCAACTGAACATTAGATCTATCTGATTTACTTCCTTTCTCTTTGTAAATAATAATCAC
AATAGTAATAGGATTTGAACAGTTACTGTTCAAGAAAGAAATTCATTGTGATTGGACATT
GAATAGGGAACATTCTTCTCCTTGTATTATAGATGTGAGTGCAAAAAGAAAATGTGTCAA
ATAAATAAATGATATTGAAGACTGTTCAAGACGTGGTTGTTTTATTTGTTACTGGAGCTG
TAGCACTTGTTACAGGAGTTGTATTAGTAATATTCAAACTAACAGAAGGTACCTGAGGAG
CTCGTTTCTTTTGTGATGCTGTAGTGGGAGGTCCAACAGAAGTATTACTACTATGTGGAA
CTACATTACTGACATTAGTACTAGTAGGAGCATTATTTATAGTGATGGAACAATCTAATC
CGAGATCAGATGATGATGATAATATTTCGGTTGTTTTGATACCACCACTTTTATCTGAGT
TAGAATTAGACAATTCTAATTGAGTTCTTTGTGTATCTTTGAGATTTCGTTCAGAAATAT
TTGTAGGCGTAGCTCTGTCCTCTATTTGTTCTACTCCATCACAATCGTTAGTAATAGCTG
TTTCATTAAATCCGTCATCTGGATAACAAATATCTTGACCTTCAAATTTCGCACGAGCTC
TATTTGCTGCAACAACAGCAGCGGTTTCCATTGCTAGTACTCTAGGAGCTGGTCCAATAC
TAGCCGCTGCAATTGGTACGTTAGCACGAAAACGTTGTACAAGTTGGGTTAATTCTTTAG
C

consensusID : consensus_10682#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 263
fasta sequence

                              [GAGCTCGTTTCTTTTGTGATGCTGTAGTGGGAGAGAGCAAGAGAAGTTAGGAAAGATAACAGCTCTGTTTTACATATTTAATTTGATTCAAAGTTCCCATTGATTATGACATTCGAATTATGATTAACCATTATATACTGTATTCAACTGAACATTAGATCTATCTGATTTACTTCCTTTCTCTTTGTAAATAATAATCACAATAGTAATAGGATTTGAACAGTTACTGTTCAAGAAAGAAATTCATTGTGATTGGACATTGA]

[+] EMBL CD193325             [GAGCTCGTTTCTTTTGTGATGCTGTAGTGGGAGAGAGCAAGAGAAGTTAGGAAAGATAACAGCTCTGTTTTACATATTTAATTTGATTCAAAGTTCCCATTGATTATGACATTCGAATTATGATTAACCATTATATACTGTATTCAACTGAACATTAGATCTATCTGATTTACTTCCTTTCTCTTTGTAAATAATAATCACAATAGTAATAGGATTTGAACAGTTACTGTTCAAGAAAGAAATTCATTGTGATTGGACATTGA]




>consensus_10682#1
GAGCTCGTTTCTTTTGTGATGCTGTAGTGGGAGAGAGCAAGAGAAGTTAGGAAAGATAAC
AGCTCTGTTTTACATATTTAATTTGATTCAAAGTTCCCATTGATTATGACATTCGAATTA
TGATTAACCATTATATACTGTATTCAACTGAACATTAGATCTATCTGATTTACTTCCTTT
CTCTTTGTAAATAATAATCACAATAGTAATAGGATTTGAACAGTTACTGTTCAAGAAAGA
AATTCATTGTGATTGGACATTGA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10682#0      GGTAGGCAATGAAACCATATATATACTCTCCTTGTTCATTCATTAGCTCCTTTTCAAATA 60
consensus_10682#1      ------------------------------------------------------------
                                                                                   

consensus_10682#0      CATATGAATAATATTAACGATTTGATAATATACACACCTATGTGTATATGTTAATATAAG 120
consensus_10682#1      ------------------------------------------------------------
                                                                                   

consensus_10682#0      ATAACTGATGAAATTAAAAGATACGAGTTAACCAGAAAAAGAAAACATTAAACGCATATA 180
consensus_10682#1      ------------------------------------------------------------
                                                                                   

consensus_10682#0      AATCATGAGATCAAAATTGTGTTAACAACAAAAAAGCAACTGGAAAAGAACATTGAATAG 240
consensus_10682#1      ------------------------------------------------------------
                                                                                   

consensus_10682#0      TAAAGGAAAAGTAAAACATGTGTACAATGGGGCAACAAAGAAACAAAACAGATAAGGCAT 300
consensus_10682#1      ------------------------------------------------------------
                                                                                   

consensus_10682#0      AAAATATCAGATGAGATAATAATTTAGGTAAGAATAACTTGTTATCTTTTTGTCATTTAA 360
consensus_10682#1      ------------------------------------------------------------
                                                                                   

consensus_10682#0      AAGAAAGGAAAAATTCAAAAAAGAGATTGTGTTTACCATTAGTGTAACTCGATGAAATAA 420
consensus_10682#1      ------------------------------------------------------------
                                                                                   

consensus_10682#0      TGACAACAAAATATCTGTTCGAAGATGGAGTGTAATACAGAGAGAGAGAGAGAGAGAGAG 480
consensus_10682#1      ---------------------------------------GAGCTCGTTTCTTTTGTGATG 21
                                                              ***   *             *

consensus_10682#0      GGAGGGAGGGAGAGAGCAAGAGAAGTTAGGAAAGATAACAGTTCTGTTTTACATATTTAA 540
consensus_10682#1      CTGTAGTGGGAGAGAGCAAGAGAAGTTAGGAAAGATAACAGCTCTGTTTTACATATTTAA 81
                            * ********************************** ******************

consensus_10682#0      TTTGATTCAAAGTTCCCATTGATTATGACATTCGAATTATGATTAACCATTATATACTGT 600
consensus_10682#1      TTTGATTCAAAGTTCCCATTGATTATGACATTCGAATTATGATTAACCATTATATACTGT 141
                       ************************************************************

consensus_10682#0      ATTCAACTGAACATTAGATCTATCTGATTTACTTCCTTTCTCTTTGTAAATAATAATCAC 660
consensus_10682#1      ATTCAACTGAACATTAGATCTATCTGATTTACTTCCTTTCTCTTTGTAAATAATAATCAC 201
                       ************************************************************

consensus_10682#0      AATAGTAATAGGATTTGAACAGTTACTGTTCAAGAAAGAAATTCATTGTGATTGGACATT 720
consensus_10682#1      AATAGTAATAGGATTTGAACAGTTACTGTTCAAGAAAGAAATTCATTGTGATTGGACATT 261
                       ************************************************************

consensus_10682#0      GAATAGGGAACATTCTTCTCCTTGTATTATAGATGTGAGTGCAAAAAGAAAATGTGTCAA 780
consensus_10682#1      GA---------------------------------------------------------- 263
                       **                                                          

consensus_10682#0      ATAAATAAATGATATTGAAGACTGTTCAAGACGTGGTTGTTTTATTTGTTACTGGAGCTG 840
consensus_10682#1      ------------------------------------------------------------
                                                                                   

consensus_10682#0      TAGCACTTGTTACAGGAGTTGTATTAGTAATATTCAAACTAACAGAAGGTACCTGAGGAG 900
consensus_10682#1      ------------------------------------------------------------
                                                                                   

consensus_10682#0      CTCGTTTCTTTTGTGATGCTGTAGTGGGAGGTCCAACAGAAGTATTACTACTATGTGGAA 960
consensus_10682#1      ------------------------------------------------------------
                                                                                   

consensus_10682#0      CTACATTACTGACATTAGTACTAGTAGGAGCATTATTTATAGTGATGGAACAATCTAATC 1020
consensus_10682#1      ------------------------------------------------------------
                                                                                   

consensus_10682#0      CGAGATCAGATGATGATGATAATATTTCGGTTGTTTTGATACCACCACTTTTATCTGAGT 1080
consensus_10682#1      ------------------------------------------------------------
                                                                                   

consensus_10682#0      TAGAATTAGACAATTCTAATTGAGTTCTTTGTGTATCTTTGAGATTTCGTTCAGAAATAT 1140
consensus_10682#1      ------------------------------------------------------------
                                                                                   

consensus_10682#0      TTGTAGGCGTAGCTCTGTCCTCTATTTGTTCTACTCCATCACAATCGTTAGTAATAGCTG 1200
consensus_10682#1      ------------------------------------------------------------
                                                                                   

consensus_10682#0      TTTCATTAAATCCGTCATCTGGATAACAAATATCTTGACCTTCAAATTTCGCACGAGCTC 1260
consensus_10682#1      ------------------------------------------------------------
                                                                                   

consensus_10682#0      TATTTGCTGCAACAACAGCAGCGGTTTCCATTGCTAGTACTCTAGGAGCTGGTCCAATAC 1320
consensus_10682#1      ------------------------------------------------------------
                                                                                   

consensus_10682#0      TAGCCGCTGCAATTGGTACGTTAGCACGAAAACGTTGTACAAGTTGGGTTAATTCTTTAG 1380
consensus_10682#1      ------------------------------------------------------------
                                                                                   

consensus_10682#0      C 1381
consensus_10682#1      -