|
These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10683#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1270 fasta sequence
[GCGAGCTGCAGCANNAAATTCACTAGTGATTCATCCATTGAGGATGGAAGGTTTTGATTGAACGGATTTGATGCGACCAACCTGATAACACTAAGTGGATATCCAAGATTGAAAATCGAAATTGAGATTTCACCTTCGATTCCATCTCACTTGCCAAATAACATGGAAGGACAAAAAGACATACTGTTGTAGCACTTTGCATCACAACCGAGTTTAGTGGTATTTGATTGGCGAAGACAAACATGAAATGCACCTCTGGCTTCATTGTCATTATTGATTATTTTTGATGACGGAGCCTCATGGTCAAATTAGTTATTTACCCGAAATTATTGTGATCATTATTGATTCCTGGACGCGCGTATGGATGGCCTCGGCCTCGTCCTCGAGGTTCTGGGATGCTGACTTTTCCCCAAGTGTCGTCTTGTCCATAGTTTGTTCCAAAGTCTTCAAAAACATGGGAATTGAAATCAGTCTGCTCATACAGAGTTATTGGAGGGTAGGCAACTGTATTTACTTCATTAGCGAACACCTCGGAAGCACCAGGAACTGGTGGTTGGACAGCAACACCGTTCTTAGCAACGCCCCTGCCTATCCAAGGCTTGCCTCGACCGCGGAAGGGGAGCTGCACTGGGGGTGCAGGGAAGGGAGCTTGAAGTGGTGGTGGTGGACCGCGCAAAGGAGGACGGATGCTTCTGACAGGAACATTCCTTCCAGGCACAGGCAAAGACTGGCTTTGCTGAACCCACTGTTGAGCTGTGGGTTCTGTTTGCTCTGGTAGCATGATCTTCCTTAC-TTCCGCTAATGCATGGGCCAACCGATAACATGATTCCGAGGGTGGTCCTAAACTATCAACTTGTAGGTGCAGCTTTTGCTTGAGATGCTGATATTTCGGATCACCATTGGAAAGGAGCTGCTTTTCTTTAGCGTCATCCCTTAGACTGCCAGCACCTAAGATCGCCATCTTTGTTTTGGTGGTTTCTTGCACTGCTCTCAATGTTTGACCTCCCGGACCAAGAAGTTTCCCAACAAAATTAATAGCGGGGTATTGTTCCTGTGGTATCTCTATTTTCGCCCTTACTTTTACTGGTTTGTTGCTGACCAAGTCAAATGAGTCCGCAATGCCGCCACGCAGACGGAAGAGTTCATTTTCCGCCAGAGAGTACAAAGCAGGAAATGCATTGCTATCCAAGTTTTGTAGTTCACGTACCAAAGCTTCAACCGTCGCCGACTGCTCTGGTCGAAGTTCGCCAATCTTCATTCTTGACAANAG]
[+] EMBL CD177859 [GCGAGCTGCAGCANNAAATTCACTAGTGATTCATCCATTGAGGATGGAAGGTTTTGATTGAACGGATTTGATGCGACCAACCTGATAACACTAAGTGGATATCCAAGATTGAAAATCGAAATTGAGATTTCACCTTCGATTCCATCTCACTTGCCAAATAACATGGAAGGACAAAAAGACATACTGTTGTAGCACTTTGCATCACAACCGAGTTTAGTGGTATTTGATTGGCGAAGACAAACATGAAATGCACCTCTGGCTTCATTGTCATTATTGATTATTTTTGATGACGGAGCCTCATGGTCAAATTAGTTATTTACCCGAAATTATTGTGATCATTATTGATTCCTGGACGCGCGTATGGATGGCCTCGGCCTCGTCCTCGAGGTTCTGGGATGCTGACTTTTCCCCAAGTGTCGTCTTGTCCATAGTTTGTTCCAAAGTCTTCAAAAACATGGGAATTGAAATCAGTCTGCTCATACAGAGTTATTGGAGGGTAGGCAACTGTATTTACTTCATTAGCGAACACCTCGGAAGCACCAGGAACTGGTGGTTGGACAGCAACACCGTTCTTAGCAACGCCCCTGCCTATCCAAGGCTTGCCTCGA ]
[+] EMBL CD095226 [ CCTCGGCCTCGTCCTCGAGGTTCTGGGATGCTGACTTTTCCCCAAGTGTCGTCTTGTCCATAGTTTGTTCCAAAGTCTTCAAAAACATGGGAATTGAAATCAGTCTGCTCATACAGAGTTATTGGAGGGTAGGCAACTGTATTTACTTCATTAGCGAACACCTCGGAAGCACCAGGAACTGGTGGTTGGACAGCAACACCGTTCTTAGCAACGCCCCTGCCTATCCAAGGCTTGCCTCGACCGCGGAAGGGGAGCTGCACTGGGGGTGCAGGGAAGGGAGCTTGAAGTGGTGGTGGTGGACCGCGCAAAGGAGGACGGATGCTTCTGACAGGAACATTCCTTCCAGGCACAGGCAAAGACTGGCTTTGCTGAACCCACTGTTGAGCTGTGGGTTCTGTTTGCTCTGGTAGCATGATCTTCCTTACTTTCCGCT ATGCATGGGCCAACCGATAACATGATTCCGAGGGTGG ]
[+] EMBL CD178079 [ ACATGGGAATTGAAATCAGTCTGCTCATACAGAGTTATTGGAGGGTAGGCAACTGTATTTACTTCATTAGCGAACACCTCGGAAGCACCAGGAACTGGTGGTTGGACAGCAACACCGTTCTTAGCAACGCCCCTGCCTATCCAAGGCTTGCCTCGACCGCGGAAGGGGAGCTGCACTGGGGGTGCAGGGAAGGGAGCTTGAAGTGGTGGTGGTGGACCGCGCAAAGGAGGACGGATGCTTCTGACAGGAACATTCCTTCCAGGCACAGG ]
[+] EMBL CD177993 [ ACATGGGAATTGAAATCAGTCTGCTCATACAGAGTTATTGGAGGGTAGGCAACTGTATTTACTTCATTAGCGAACACCTCGGAAGCACCAGGAACTGGTGGTTGGACAGCAACACCGTTCTTAGCAACGCCCCTGCCTATCCAAGGCTTGCCTCGACCGCGGAAGGGGAGCCGCACTGGGGGTGCAGGGAAGGGAGCTTGAAGTGGTGGTGGTGGACCGCGCAAAGGAGGACGGATGCTTCTGACAGGAACATTCCTTCCAGGCACAGG ]
[-] EMBL CD083938 [ ATGGGAATTGAAATCAGTCTGCTCATACAGAGTTATTGGAGGGTAGGCAACTGTATTTACTTCATTAGCGAACACCTCGGAAGCACCAGGAACTGGTGGTTGGACAGCAACACCGTTCTTAGCAACGCCCCTGCCTATCCAAGGCTTGCCTCGACCGCGGAAGGGGAGCTGCACTGGGGGTGCAGGGAAGGGAGCTTGAAGTGGTGGTGGTGGACCGCGCAAAGGAGGACGGATGCTTCTGACAGGAACATTCCTTCCAGGCACAGGCAAAGACTGGCTTTGCTGAACCCACTGTTGAGCTGTGGGTTCTGTTTGCTCTGGTAGCATGATCTTCCTANC TTCCGCTAATGCATGGGCCAACCGATGACATGATTCCGAGGGTGGTCCTAAACTATCAACTTGTAGGTGCAGCTcctcg ]
[+] EMBL BG932642 [ AGGGTAGGCAACTGTATTTACTTCATTAGCGAACACCTCGGAAGCACCAGGAACTGGTGGTTGGACAGCAACACCGTTCTTAGCAACGCCCCTGCCTATCCAAGGCTTGCCTCGACCGGGGAAGGGGAGCTGCACTGGGGGTGCAGGGAAGGGAGCTTGAAGTGGTGGTGGTGGACCGCGCACAGGAGGACGG ]
[+] EMBL CD152611 [ GGTAGGCAACTGTATTTACTTCATTAGCGAACACCTCGGAAGCACCAGGAACTGGTGGTTGGACAGCAACACCGTTCTTATCAACGCCCCTGCCTATCCAAGGCTTGCCTCGACCGCGGAAGGGGAGCTGCACTGGGGGTGCAGGGAAGGGAGCTTGAAGTGGTGGTGGTGGACCGCGCAAAGGAGGACGGATGCTTCTGACAGGAACATTCCTTTCAGGCACAGGCAAAGACTGGC TTGCTGAACCCACTGTTGAGCTGTGG ]
[+] EMBL CD186263 [ AACTGTATTTACTTCATTAGCGAACACCTCGGAAGCACCAGGAACTGGTGGTTGGACAGCAACACCGTTCTTAGCAACGCCCCTGCCTATCCAAGGCTTGCCTCGACCGCGGAAGGGGAGCTGCACTGGGGGTGCAGGGAAGGGAGCTTGAAGTGGTGGTGGTGGACCGCGCAAAGGAGGACGGATGCTTCTGACAGGAACATTCCTTCCAGGCACGGGCAAAGACTGGCTTTGCTGAACCCACTGTTGAGCTGTGGGTTCTGTTTGCTCTGGTAGCATGATCTTCCTTAC TTCCGCTAATGCATGGGCCAACCGATAACATGATTCCGAGGGTGGTCCTAAACTATCAACTTGTAGGTGCAGCTTTTGCTTGAGATGCTGATATTTCGGATCACCATTGGAAAGGAGCTGCTTTTCTTTAGCGTCATCCCTTAGACTGCCAGCACCTAAGAT ]
[-] EMBL CD082930 [ AGGACGGATGCTTCTGACAGGAACATTCCTTCCAGGCACAGGCAAAGACTGGCTTTGCTGAACCCACTGTTGAGCTGTGGGTTCTGTTTGCTCTGGTAGCATGATCTTCCTTAC TTCCGCTAATGCATGGGCCAACCGATAACATGATTCCGAGGGTGGTCCTAAACTATCAACTTGTAGGTGCAGCTTTTGCTTGAGATGCTGATATTTCGGATCACCATTGGAAAGGAGCTGCTTTTCTTTAGCGTCATCCCTTAGACTGCCAGCACCTAAGATCGCCATCTTTGTTTTGGTGGTTTCTTGCACTGCTCTCAATGTTTGACCTCCCGGACCAAGAAGTTTCCCAACAAAATTAATAGCGGGGTATTGTTCCTGTGGTATCTCTATTTTCGCCCTTACTTTTACTGGTTTGTTGCTGACCAAGTCAAATGAGTCCGCAATGCCGCCACGCAGACGGAAGAGTTCATTTTCCGCCAGAGAGTACAAAGCAGGAAATGCATTGCTATCCAAGTTTTGTAGTTCACGTACCAAAGCTTCAACCGTCGCCGACTGCTCTGGTCGAAGTTC ]
[-] EMBL CD096010 [ TGACAGGAACATTCCTTCCAGGCACAGGCAAAGACTGGCTTTGCTGAACCCACTGTTGAGCTGTGGGTTCTGTTTGCTCTGGTGGCATGATCTTCCTTAC TTCCGCTAATGCATGGGCCAACCGATAACATGATTCCGAGGGTGGTCCTAAACTATCAACTTGTAGGTGCAGCTTTTGCTTGAGATGCTGATATCTCGGATCACCATTGGAAAGGAGCTGCTTTTCTTTAGCGTCATCCCTTAGACTGCCAGCACCTAAGATCGCCATCTTTGTTTTGGTGGTTTCTTGCACTGCTCTCAATGTTTGACCTCCCGGACCAAGAAGTTTCCCAACAAAATTAATAGCG ]
[+] EMBL CD113620 [ TTCCAGGCACAGGCAAAGACTGGCTTTGCTGAACCCACTGTTGAGCTGTGGGTTCTGTTTGCTCTGGTAGCATGATCTTCCTTAC TTCCGCTAATGCATGGGCCAACCGATAACATGATTCCGAGGGTGGTCCTAAACTATCAACTTGTAGGTGCAGCTTTTGCTTGAGATGCTGATATTTCGGATCACCATTGCAAAGGAGCTGCTTTTCTTTAGCGTCATCCCTTATACTGCCAGCACCTAAGATCGCCATCTTTGTTTTGGAGGCTTCTTGCACTGCTCTCAATGTTTGACCTCCCGGACCAAGAAGGTTCCCAACAAAATTAATAG ]
[+] EMBL CD113602 [ TTCCAGGCACAGGCAAAGACTGGCTTTGCTGAACCCACTGTTGAGCTGTGGGTTCTGTTTGCTCTGGTAGCATGATCTTCCTTAC TTCCGCTAATGCATGGGCCAACCGATAACATGATTCCGAGGGTGGTCCTAAACTATCAACTTGTACGTGCAGCTTTTGCTTGAGATGCTGATATTTCGGATCACCATTGGAAAGGAGCTGCTTTTCTTTAGCGTCATCCCTTATACTGCCAGCACCTAAGATCGCCATCTTTGTTTCGGAGGTTTCTTGCACTGCTCTCAATGTTTGACCTCCCGGA ]
[+] EMBL CD113639 [ TTCCAGGCACAGGCAAAGACTGGCTTTGCTGAACCCACTGTTGAGCTGTGGGTTCTGTTTGCTCTGGTAGCATGATCTTCCTTAC TTCCGCTAATGCATGGGCCAACCGATAACATGATTCCGAGGGTGGTCCTAAACTATCAACTTGTAGGTGCAGCTTTTGCTTGAGGTGCTGACATTTCGGATCACCATTGGAAAGGAGCTGCTTTTCTTTAGCGTCATCCCTTAGACTGCCAGCACCTAAGATCGCCATCTTTGTTTTGGTGGTTTCTTGCACTGCTCTCAATGTTTGACCTCCCGGACCAAGAAGTTTCCCAACAAAATTAATAGCGGGGTATTGTTCCTGTGGTATCTCTATTTTCGCCCTTACTTTTACTGGTTTGTTGCTGACCAAGTCAAATGAGTCCGCAATGCCGCCACGCAGACGGAAGAGTTCATTTTCCGCCAGAGAGTACAAAGCAGGAAATGCATTGCTATCCAAGTTTTGTAGTTCACGTACCAAAGCTTCAACCGTCGCCGACTGCTCTGGTCGAAGTTCGCCAATCTTCATTCTTGACAANAG]
consensusID : consensus_10683#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 598 fasta sequence
[AATCCTAAATATTCACTGACAGATAATAAATCCAGGATTTACCAGGAATATGTCATTTTGCTCATCATCATTTTTGATAACAAATAAAAGATTTAGACTAAACAAAACCTTGGATACTTTATAACCGGAAATGCATTTTTGATTTTGACTGAGAATTTTGACATGTTAACACTCTATCGAAAAGTGATGGGGGACAGAGAAGTGTAGTGAAACAATTGCTACACAATCCAGAAAACACAAAACGGTTACATACCATATAAGATTTGCCGACTATTTCCTAGTTTAAAAATAGATGTCTTTTGGCCAAAGAGCAAATATTAGTAAATCATGTACTATTCATAGAATTAGTCCTGAAAAGTCTGTTAGGAGAAAGAAAAGACCCGTAATTACTAACTAAAACTCTTGATTTCGACGTGATCAGAGCTGATAGACAAGAACACCAAACATAAATCTTACAAAGGTTTTGATTGAACGGATTTGATGCGACCAACCTGATAACACTAAGTGGATATCCAAGATTGAAAATCGAAATTGAGATTTCACCTTCGATTCCATCTCACTTGCCANATAACATGGAAGGACAAAAAGACATACTGTT]
[+] EMBL CD122977 [AATCCTAAATATTCACTGACAGATAATAAATCCAGGATTTACCAGGAATATGTCATTTTGCTCATCATCATTTTTGATAACAAATAAAAGATTTAGACTAAACAAAACCTTGGATACTTTATAACCGGAAATGCATTTTTGATTTTGACTGAGAATTTTGACATGTTAACACTCTATCGAAAAGTGATGGGGGACAGAGAAGTGTAGTGAAACAATTGCTACACAATCCAGAAAACACAAAACGGTTACATACCATATAAGATTTGCCGACTATTTCCTAGTTTAAAAATAGATGTCTTTTGGCCAAAGAGCAAATATTAGTAAATCATGTACTATTCATAGAATTAGTCCTGAAAAGTCTGTTAGGAGAAAGAAAAGACCCGTAATTACTAACTAAAACTCTTGATTTCGACGTGATCAGAGCTGATAGACAAGAACACCAAACATAAATCTTACAAAGGTTTTGATTGAACGGATTTGATGCGACCAACCTGATAACACTAAGTGGATATCCAAGATTGAAAATCGAAATTGAGATTTCACCTTCGATTCCATCTCACTTGCCANATAACATGGAAGGACAAAAAGACATACTGTT]
[+] EMBL CD122771 [AATCCTAAATATTCACTGACAGATAATAAATCCAGGATTTACCAGGAATATGTCATTTTGCTCATCATCATTTTTGATAACAAATAAAAGATTTAGACTAAACAAAACCTTGGATACTTTATAACCGGAAATGCATTTTTGATTTTGACTGAGAATTTTGACATGTTAACACTCTATCGAAAAGTGATGGGGGACAGAGAAGTGTAGTGAAACAATTGCTACACAATCCAGAAAACACAAAACGGTTACATACCATATAAGATTTGCCGACTATTTCCTAGTTTAAAAATAGATGTCTTTTGGCCAAAGAGCAAATATTAGTAAATCATGTACTATTCATAGAATTAGTCCTGAAAAGTCTGTTAGGAGAAAGAAAAGACCCGTAATTACTAACTAAAACTCTTGATTTCGACGTGATCAGAGCTGATAGACAAGAACACCAAACATAAATCTTACAAAGGTTTTGATTGAACGGATTTGATGCGACCAACCTGATAACACTAAGTGGATATCCAAGATTGAAAATCGAAATTGAGATTTCACCTTCGATTCCATCTCACTTGCCAAATAACATGGAA ]
consensusID : consensus_10683#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 588 fasta sequence
[ACAGAAGTATTATGGTATTTATTTAGTGAATTTAACAAGTTTAAGTTTATCATTACATATTTAGACAGTACTACAGACAAGCAGTTAGATAATTTAAGCAAATTTTTTTACCGAGTTTAGTGGTATTTGATTGGCGAAGACAAACATGAAATGCACCTCTGGCTTCATTGTCATTATTGATTATTTTTGATGACGGAGCCTCATGGTCAAATTAGTTATTTACCCGAAATTATTGTGATCATTATTGATTCCTGGACGCGCGTATGGATGGCCTCGGCCTCGTCCTCGAGGTTCTGGGATGCTGACTTTTCCCCAAGTGTCGTCTTGTCCATAGTTTGTTCCAAAGTCTTCAAAAACATGGGAATTGAAATCAGTCTGCTCATACAGAGTTATTGGAGGGTAGGCAACTGTATTTACTTCATTAGCGAACACCTCGGAAGCACCAGGAACTGGTGGTTGGACAGCAACACCGTTCTTAGCAACGCCCCTGCCTATCCAAGGCTTGCCTCGACCGCGGAAGGGGAGCTGCACTGGGGGTGCAGGGAAGGGAGCTTGAAGTGGTGGTGGTGGACCGCGCAAAGGAGGACG]
[+] EMBL CD076514 [ACAGAAGTATTATGGTATTTATTTAGTGAATTTAACAAGTTTAAGTTTATCATTACATATTTAGACAGTACTACAGACAAGCAGTTAGATAATTTAAGCAAATTTTTTTACCGAGTTTAGTGGTATTTGATTGGCGAAGACAAACATGAAATGCACCTCTGGCTTCATTGTCATTATTGATTATTTTTGATGACGGAGCCTCATGGTCAAATTAGTTATTTACCCGAAATTATTGTGATCATTATTGATTCCTGGACGCGCGTATGGATGGCCTCGGCCTCGTCCTCGAGGTTCTGGGATGCTGACTTTTCCCCAAGTGTCGTCTTGTCCATAGTTTGTTCCAAAGTCTTCAAAAACATGGGAATTGAAATCAGTCTGCTCATACAGAGTTATTGGAGGGTAGGCAACTGTATTTACTTCATTAGCGAACACCTCGGAAGCACCAGGAACTGGTGGTTGGACAGCAACACCGTTCTTAGCAACGCCCCTGCCTATCCAAGGCTTGCCTCGACCGCGGAAGGGGAGCTGCACTGGGGGTGCAGGGAAGGGAGCTTGAAGTGGTGGTGGTGGACCGCGCAAAGGAGGACG]
[+] EMBL CD077305 [ACAGAAGTATTATGGTATTTATTTAGTGAATTTAACAAGTTTAAGTTTATCATTACATATTTAGACAGTACTACAGACAAGCAGTTAGATAATTTAAGCAAATTTTTTTACCGAGTTTAGTGGTATTTGATTGGCGAAGACAAACATGAAATGCACCTCTGGCTTCATTGGCATTATTGATTATTTTTGATGACGGAGCCTCATGGTCAAATTAGTTATTTACCCGAAATTATTGGGATCATTATTGATTCCTGGACGCGCGTATGGATGGCCTCGGCCTCGTCCTCGAGGTTCTGGGATGCTGACTTTTCCCCAAGTGTCGTCTTGTCCATAGTTTGTTCCAAAGTCTTCAAAAACATGGGAATTGAAATCAGTCTGCTCATACAGAGTTATTGGAGGGTAGGCAACTGTATTTACTTCATTAGCGAACACCTCGGAAGCACCAGGAACTGGTGGTTGGACAGCAACACCGTTCTTAGCAACGCCCCTGCCTATCCAAGGCTTGCCTCGACCGCGGAAGGGGAGCTGCACTGGGGGTGCAGGGAAGGGAGCTTG ]
[-] EMBL CD097098 [ AAGACAAACATGAAATGCACCTCTGGCTTCATTGTCATTATTGATTATTTTTGATGACGGAGCCTCATGGTCAAATTAGTTATTTACCCGAAATTATTGTGA ]
consensusID : consensus_10683#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 338 fasta sequence
[TGCTTCTGACAGGAACATTCCTTCCAGGCACAGGCAAAGACTGGCTTTGCTGAACCCACTGTTGAGCTGTGGGTTCTGTTTGCTCTGGTAGCATGATCTTCCCTACTTCCGCTAATGCATGGGCCAACCGATAACATGACTCCGAGGGTGGTCCTAAACTATCAACTTGTAGGTGCAGAAAAAAGTGAAGCTACCCGACCTACCATAGTTTGTTCCAAAGTCTTCAAAAACATGGGAATTGAAATCAGTCTGCTCATACAGAGTTATTGGAGGGTAGGCAACTGTATTTACTTCATTAGCGAACACCTCGGAAGCACCAGGAACTGGTGGTTGGACAG]
[+] EMBL CD091395 [TGCTTCTGACAGGAACATTCCTTCCAGGCACAGGCAAAGACTGGCTTTGCTGAACCCACTGTTGAGCTGTGGGTTCTGTTTGCTCTGGTAGCATGATCTTCCCTACTTCCGCTAATGCATGGGCCAACCGATAACATGACTCCGAGGGTGGTCCTAAACTATCAACTTGTAGGTGCAGAAAAAAGTGAAGCTACCCGACCTACCATAGTTTGTTCCAAAGTCTTCAAAAACATGGGAATTGAAATCAGTCTGCTCATACAGAGTTATTGGAGGGTAGGCAACTGTATTTACTTCATTAGCGAACACCTCGGAAGCACCAGGAACTGGTGGTTGGACAG]
consensusID : consensus_10683#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 289 fasta sequence
[CTTCCAGGCACAGGCAAAGACTGGCTTTGCTGAACCCACTGTTGAGCTGTGGGTTCTGTTTGCTCTGGTAGCATGGTCTTCCTTACTTCCGCTAATGCATGGGCCAGCCGATAACATGATTCCGAGGGTGGTCCTAAACTATCAACTTGTAGGTGCAGCTTTTGCTTGAGATGCTGATATTTCGGATCACCATTGGAAAGGAGCTGCTTTTCTTTAGCGTCATCCCTTAGACTGCCAGCACCTAAGATCGCCATCTTTGTTTTGGTGGTTTCTTGCATTAGCGGAAGTA]
[-] EMBL CD188032 [CTTCCAGGCACAGGCAAAGACTGGCTTTGCTGAACCCACTGTTGAGCTGTGGGTTCTGTTTGCTCTGGTAGCATGGTCTTCCTTACTTCCGCTAATGCATGGGCCAGCCGATAACATGATTCCGAGGGTGGTCCTAAACTATCAACTTGTAGGTGCAGCTTTTGCTTGAGATGCTGATATTTCGGATCACCATTGGAAAGGAGCTGCTTTTCTTTAGCGTCATCCCTTAGACTGCCAGCACCTAAGATCGCCATCTTTGTTTTGGTGGTTTCTTGCATTAGCGGAAGTA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10683#0 GCGAGCTGCAGCANNAAATTCACTAGTGATTCATCCATTGAGGATGGAAGGTTTTGATTG 60
consensus_10683#4 ------------------------------------------------------------
consensus_10683#3 ------------------------------------------------------------
consensus_10683#2 ------------------------------------------------------------
consensus_10683#1 ------------------------------------------------------------
consensus_10683#0 AACGGATTTGATGCGACCAACCTGATAACACTAAGTGGATATCCAAGATTGAAAATCGAA 120
consensus_10683#4 ------------------------------------------------------------
consensus_10683#3 ------------------------------------------------------------
consensus_10683#2 ------------------------------------------------------------
consensus_10683#1 ------------------------------------------------------------
consensus_10683#0 ATTGAGATTTCACCTTCGATTCCATCTCACTTGCCAAATAACATGGAAGGACAAAAAGAC 180
consensus_10683#4 ------------------------------------------------------------
consensus_10683#3 ------------------------------------------------------------
consensus_10683#2 ------------------------------------------------------------
consensus_10683#1 ------------------------------------------------------------
consensus_10683#0 ATACTGTTGTAGCACTTTGCATCACAACCGAGTTTAGTGGTATTTGATTGGCGAAGACAA 240
consensus_10683#4 ------------------------------------------------------------
consensus_10683#3 ------------------------------------------------------------
consensus_10683#2 ------------------------------------------------------------
consensus_10683#1 ------------------------------------------------------------
consensus_10683#0 ACATGAAATGCACCTCTGGCTTCATTGTCATTATTGATTATTTTTGATGACGGAGCCTCA 300
consensus_10683#4 ------------------------------------------------------------
consensus_10683#3 ------------------------------------------------------------
consensus_10683#2 ------------------------------------------------------------
consensus_10683#1 ------------------------------------------------------------
consensus_10683#0 TGGTCAAATTAGTTATTTACCCGAAATTATTGTGATCATTATTGATTCCTGGACGCGCGT 360
consensus_10683#4 ------------------------------------------------------------
consensus_10683#3 ------------------------------------------------------------
consensus_10683#2 ------------------------------------------------------------
consensus_10683#1 ------------------------------------------------------------
consensus_10683#0 ATGGATGGCCTCGGCCTCGTCCTCGAGGTTCTGGGATGCTGACTTTTCCCCAAGTGTCGT 420
consensus_10683#4 ------------------------------------------------------------
consensus_10683#3 ------------------------------------------------------------
consensus_10683#2 ------------------------------------------------------------
consensus_10683#1 ------------------------------------------------------------
consensus_10683#0 CTTGTCCATAGTTTGTTCCAAAGTCTTCAAAAACATGGGAATTGAAATCAGTCTGCTCAT 480
consensus_10683#4 ------------------------------------------------------------
consensus_10683#3 ------------------------------------------------------------
consensus_10683#2 ------------------------------------------------------------
consensus_10683#1 ------------------------------------------------------------
consensus_10683#0 ACAGAGTTATTGGAGGGTAGGCAACTGTATTTACTTCATTAGCGAACACCTCGGAAGCAC 540
consensus_10683#4 ------------------------------------------------------------
consensus_10683#3 ------------------------------------------------------------
consensus_10683#2 ------------------------------------------------------------
consensus_10683#1 ------------------------------------------------------------
consensus_10683#0 CAGGAACTGGTGGTTGGACAGCAACACCGTTCTTAGCAACGCCCCTGCCTATCCAAGGCT 600
consensus_10683#4 ------------------------------------------------------------
consensus_10683#3 ------------------------------------------------------------
consensus_10683#2 ------------------------------------------ACAGAAGTATTATGGTAT 18
consensus_10683#1 ------------------------------------------------------------
consensus_10683#0 TGCCTCGACCGCGGAAGGGGAGCTGCACTGGGGGTGCAGGGAAGGGAGCTTGAAGTGGTG 660
consensus_10683#4 ------------------------------------------------------------
consensus_10683#3 ------------------------------------------------------------
consensus_10683#2 TTATTTAGTGAATTTAACAAGTTTAAGTTTATCATTACATATTTAGACAGTACTACAGAC 78
consensus_10683#1 ------------------AATCCTAAATATTCACTGACAGATAATAAATCCAGGATTTAC 42
consensus_10683#0 GTGGTGGACCGCGCAAAGGAGGACGGATGCTTCTGACAGGAACATTCCTTC-CAGGCACA 719
consensus_10683#4 -----------------------------------------------CTTC-CAGGCACA 12
consensus_10683#3 ---------------------------TGCTTCTGACAGGAACATTCCTTC-CAGGCACA 32
consensus_10683#2 AAGCAGTTAGATAATTTAAGCAAATTTTTTTACCGAGTTTAGTGGTATTTGATTGGCGAA 138
consensus_10683#1 CAGGAATATGTCATTTTGCTCATCATCATTTTTGATAACAAATAAAAGATT-TAGACTAA 101
* * * *
consensus_10683#0 GGCAAAGACTG---GCTTTGCTGAACCCACTGTTGAGCTGTGGGTTCTGTTTGCTCTGGT 776
consensus_10683#4 GGCAAAGACTG---GCTTTGCTGAACCCACTGTTGAGCTGTGGGTTCTGTTTGCTCTGGT 69
consensus_10683#3 GGCAAAGACTG---GCTTTGCTGAACCCACTGTTGAGCTGTGGGTTCTGTTTGCTCTGGT 89
consensus_10683#2 GACAAACATGAAATGCACCTCTGGCTTCATTGTCA--TTATTGATTATTTTTGATGACGG 196
consensus_10683#1 ACAAAACCTTG---GATACTTTATAACCGGAAATGCATTTTTGATTTTGACTGAGAATTT 158
*** * * * * * * ** * **
consensus_10683#0 AGC---ATGATC---TTCCTTACTTCCGCTAATGCATGG--GCCA--ACCGATAACATGA 826
consensus_10683#4 AGC---ATGGTC---TTCCTTACTTCCGCTAATGCATGG--GCCA--GCCGATAACATGA 119
consensus_10683#3 AGC---ATGATC---TTCCCTACTTCCGCTAATGCATGG--GCCA--ACCGATAACATGA 139
consensus_10683#2 AGCCTCATGGTCAAATTAGTTATTTACCCGAAATTATTGTGATCATTATTGATTCCTGGA 256
consensus_10683#1 TGACATGTTAACACTCTATCGAAAAGTGATGGGGGACAGAGAAGTGTAGTGAAACAATTG 218
* * * * * * * **
consensus_10683#0 TT-C---CGAGGGTGGTCCTAAACT-ATC----AACTTGTAGG---TGCAGCTTTTGCTT 874
consensus_10683#4 TT-C---CGAGGGTGGTCCTAAACT-ATC----AACTTGTAGG---TGCAGCTTTTGCTT 167
consensus_10683#3 CT-C---CGAGGGTGGTCCTAAACT-ATC----AACTTGTAGG---TGCAGAAAAAAGTG 187
consensus_10683#2 CG-CGCGTATGGATGGCCTCGGCCTCGTCCTCGAGGTTCTGGGA--TGCTGACTTTTCCC 313
consensus_10683#1 CTACACAATCCAGAAAACACAAAACGGTTACATACCATATAAGATTTGCCGACTATTTCC 278
* * * * * * * *** *
consensus_10683#0 GAGATGCTG--------ATATTTCGGATCA--------CCATTGGAAAGGAGCTGCTTTT 918
consensus_10683#4 GAGATGCTG--------ATATTTCGGATCA--------CCATTGGAAAGGAGCTGCTTTT 211
consensus_10683#3 AAGCTACCCGACCTACCATAGTTTGTTCCAA-----AGTCTTCAAAAACATGGGAATTGA 242
consensus_10683#2 CAAGTGTCGTCTTGTCCATAGTTTGTTCCAA-----AGTCTTCAAAAACATGGGAATTGA 368
consensus_10683#1 TAGTTTAAAAATAGAT-GTCTTTTGGCCAAAGAGCAAATATTAGTAAATCATGTACTATT 337
* * * ** * * * *** *
consensus_10683#0 CTTTAGCGTCATCCCTTAGACTGCCAGCACCTAAGATCGCCATCTTTGTTTTGGTGGTT- 977
consensus_10683#4 CTTTAGCGTCATCCCTTAGACTGCCAGCACCTAAGATCGCCATCTTTGTTTTGGTGGTT- 270
consensus_10683#3 AATCAGTCTGCTCATACAGAGTTATTGGAGGGTAGGCAACTGTATTTACTTCATTAGCGA 302
consensus_10683#2 AATCAGTCTGCTCATACAGAGTTATTGGAGGGTAGGCAACTGTATTTACTTCATTAGCGA 428
consensus_10683#1 CATAGAATTAGTCCTGAAAAGTCTGTTAGGAGAAAGAAAAGACCCGTAATTACTAACTAA 397
* * ** * * * * * **
consensus_10683#0 -TCTTGCACTGCTCTCAATGTTTG-ACCTCCCGGACCAAGAAGTTTCCCAACAAAATTAA 1035
consensus_10683#4 -TCTTGCATTAGCGGAAGTA---------------------------------------- 289
consensus_10683#3 ACACCTCGGAAGCACCAGGAACTG-GTGGTTGGACAG----------------------- 338
consensus_10683#2 ACACCTCGGAAGCACCAGGAACTG-GTGGTTGGACAGCAACACCGTTCTTAGCAACGCCC 487
consensus_10683#1 AACTCTTGATTTCGACGTGATCAGAGCTGATAGACAAGAACACCAAACATAAATCTTACA 457
consensus_10683#0 TAGCGGGGTATTGTTCCTGTGGTATCTCTATTTTCGCCCTTACTTTTACTGGTTTGTTGC 1095
consensus_10683#4 ------------------------------------------------------------
consensus_10683#3 ------------------------------------------------------------
consensus_10683#2 CTGCCTATCCAAGGCTTGCCTCGACCGCGGAAGGGGAGCTGCACTGGGGGTGCAGGGAAG 547
consensus_10683#1 AAGGTTTTGATTGAACGGATTTGATGCGACCAACCTGATAACACTAAGTGGATATCCAAG 517
consensus_10683#0 TGACCAAGTCAAATGAGTCCGCAATGCCGCCACGCAGACGGAAGAGTTCATTTTCCGCCA 1155
consensus_10683#4 ------------------------------------------------------------
consensus_10683#3 ------------------------------------------------------------
consensus_10683#2 GGAGCTTGAAGTGGTGGTGGTGGACCGCGCAAAGGAGGACG------------------- 588
consensus_10683#1 ATTGAAAATCGAAATTGAGATTTCACCTTCGATTCCATCTCACTTGCCANATAACATGGA 577
consensus_10683#0 GAGAGTACAAAGCAGGAAATGCATTGCTATCCAAGTTTTGTAGTTCACGTACCAAAGCTT 1215
consensus_10683#4 ------------------------------------------------------------
consensus_10683#3 ------------------------------------------------------------
consensus_10683#2 ------------------------------------------------------------
consensus_10683#1 AGGACAAAAAGACATACTGTT--------------------------------------- 598
consensus_10683#0 CAACCGTCGCCGACTGCTCTGGTCGAAGTTCGCCAATCTTCATTCTTGACAANAG 1270
consensus_10683#4 -------------------------------------------------------
consensus_10683#3 -------------------------------------------------------
consensus_10683#2 -------------------------------------------------------
consensus_10683#1 -------------------------------------------------------
|
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||