cluster # 10685

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Schistosoma mansoni
cluster # 10685 cluster # 10685 Sequences # 20 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10685#0 length = 1559 sequences # 12
consensus_10685#1 length = 757 sequences # 6

consensus_10685#2 length = 335 sequences # 1
consensus_10685#3 length = 296 sequences # 1

consensusID : consensus_10685#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 1559
fasta sequence

                              [TTAGTTCTCTGAAGATGGCTACTGTTCTTCCAAAGTTTTCTGATTTGTATAGTTTGAAAGAAGAAGTTGGGCGTGGAGCATTCTCA--ACTTCG-AAATGCATTCAGCTCTCAACAGGTCTAGAATTTGCCGCTAAGATCATAAATACGAAACGCCTGTCAACCAGAGACATGCAGAAGTTGGAACGCGAGGCCAGAATATGCAGGCTTCTGAAGCACCCTAACATAGTTCGCCTATACGATGACATTCAGGACGAAGGGTTTCACTATCTCGTATTTGATTTAGTTACTGGTGGTGAACTCTTCGAGGACATTGTTGCTCGGGAATTCTACAGTGAAGCGGATGCTAGTAACTGTATGCAGCAAATTATTGAAAGTGTGAATTACTGTCATCAGAATAATATTGTACATCGAGATTTAAAGCCAGAAAATTTGTTACTTGCTAGTAAATCCAAAGGGGCTGCAGTGAAACTAGCGGATTTCGGTCTGGCAATAGAAGTTCAGGGTGATCAGCCAGCTTGGTTTGGTTTTGCCGGCACACCTGGTTATCTTTCTCCAGAGGTGTTGCGTAAAGAACCATATGGTAAAGCGGTAGACGTCTGGGCTTGTGGCGTTATTCTTTACATCCTTCTTGTTGGATACCCACCATTCTGGGATGAAGATCAAAATCGATTGTACAGTCAAATCAAATCGGGAGCATATGATTATCCTTCACCAGAATGGGATACAGTTACCCCTGAAGCTAAGAATTTAATCAACTTAATGCTAACAGTCAGTCCTGCGAGGCGAATCACAGCTGCAGAAGCCCTCAAGCACCCATGGATTTG---------TCAACGAGAACGTGTCGCTTCCCTTGTGCATCGTCAGGAGACGGTGGAGTGCTTGAAGAAATTCAATGCACGACGTAAACTGAAGGGTGCTATACTTACGACTATGCTAGCCACACGTAATTTTTCCATGAAAAAGGATGATAGTTCTGGTCGAGGTACCGTTCCAGGAAGTCATACTTCTGTGACTAAAAAGTCTAACGATGGTATTAAGGAATCGTCTGACAGCTCTACCGCAGTAATGGAGGACTCAGCTGATATAAAAACTTTCCCGCAATAACATATATCGAGATGTGTACTTACCGTTATTTGTATTCGCATTACGAACTAGTGGGTATTATTCGAAGAGGCAAAAAACAGGACATCATCCGGGCGACAGAACAACTATTGGCTGCTGCAGCAGCTGGAGATTTCGAACTCTACCTTAAATTTTTGGATTCTCAATTCACTT-ATTTCGATCCAGAAGCATGGGGGGAATTTACTTTGAGGGGAGCGGATTTCCATAAGTTTTACTTTGAACAAATCATTTCCGGAATCAGGTTGTTCGCGGCTATTCACACCAGTTTACTCAACNCCGACTTGACATTTAATGGGTGAAGACGCAGTTTGTATTGGCTACAACAAACTTATTAAGGTCTTTAGATAAATGGGGTATGCCCCATAACCAAACAACAGAAGAAACCGGTGTTTGGGTAAAAACTATATGATCGGGGCTGGCAGAAGGTTCCTGGACATCCGT]

[+] EMBL CD188819             [TTAGTTCTCTGAAGATGGCTACTGTTCTTCCAAAGTTTTCTGATTTGTATAGTTTGAAAGAAGAAGTTGGGCGTGGAGCATTCTCA  ACTTCG AAATGCATTCAGCTCTCAACAGGTCTAGAATTTGCCGCTAAGATCATAAATACGAAACGCCTGTCAACCAGAGACATGCAGAAGTTGGAACGCGAGGCCAGAATATGCAGGCTTCTGAAGCACCCTAACATAGTTCGCCTATACGATGACATTCAGGACGAAGGGTTTCACTATCTCGTATTTGATTTAGTTACTGGTGGTGAACTCTTCGAGGACATTGTTGCTCGGGAATTCTACAGTGAAGCGGATGCTAGTAACTGTATGCAGCAAATTATTGAAAGTGTGAATTACTGTCATCAGATTAATATTGTACATCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD200293             [                    ACTGTTCTTCCAAAGTTTTCTGATTTGTATAGTTTGAAAGAAGAAGTTGGGCGTGGAGCATTCTCAATAGTTCGAAAATGCATTCAGCTCTCAACAGGTCTAGAATTTGCCGCTAAGATCATAAATACGAAACGCCTGTCAACCAGAGACATGCAGAAGTTGGAACGCGAGGCCAGAATATGCAGGCTTCTGAAGCACCCTAACATAGTTCGCCTATACGATGACATTCAGGACGAAGGGTTTCACTATCTCGTATTTGATTTAGTTACTGGTGGTGAACTCTTCGAGGACATTGTTGCTCGGGAATTCTACAGTGAAGCGGATGCTAGTAACTGTATGCAGCAAATTATTGAAAGTGTGAATTACTGTCATCAGAATAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD116782             [                                                                                                                                                                                                                                                                                 TATTTGATTTAGTTACTGGTGGTGAACTCTTCGAGGACATTGTTGCTCGGGAATTCTACAGTGAAGCGGATGCTAGTAACTGTATGCAGCAAATTATTGAAAGTGTGAATTACTGTCATCAGAATAATATTGTACATCGAGATTTAAAGCCAGAAAATTTGTTACTTGCTAGTAAATCCAAAGGGGCTGCAGTGAAACTAGCGGATTTCGGTCTGGCAATAGAAGTTCAGGGTGATCAGCCAGCTTGGTTTGGTTTTGCCGGCACACCTGGTTATCTTTCTCCAGAGGTGTTGCGTAAAGAACCATATGGTAAAGCGGTAGACGTCTGGGCTTGTGGCGTTATTCTTTGCATCCTTCTTGTTGGATACCCACCATTCTGGGATGAAGATCAAAATCGATTGTACAGTCAAATCAAATCGGGAGCATATGATTATCCTTCACCAGAATGGGATACAGTTACCCCTGAAGCTAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD149777             [                                                                                                                                                                                                                                                                                                                                            AGTGAAGCGGATGCTAGTAACTGTATGCGGCAAATTATTGAAAGTGTGAATTACTGTCATCAGAATAATATTGTACATCTAGATTTAAAGCCAGAAAATTTGTTACTTGCTAGTAAATCCAAAGGGGCTGCAGTGAAACTAGCGGATTTCGGTCTGGCAATAGAAGTTCAGGGTGATCAGCCAGCTTGGTTTGGTTTTGCCGGCACACCTGGTTATCTTTCTCCAGAGGTGTTGCGTAAAGAACCATATGGTAAAGCGGTAGACGTCTGGGCTTGTGGCGTTATTCTTTACATCCTTCTTGTTGGATACCCACCATTCTGGGATGAAGATCAAAATCGATTGTACAGTCAAATCAAATCGGGAGCATATGATTATCCTTCACCAGAATGGGATACAGTCACCCCTGAAGCTAAGAATTTAATCAACTTAATGCTAACAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD149763             [                                                                                                                                                                                                                                                                                                                                            AGTGAAGCGGATGCTAGTAACTGTATGCGGCAAATTATTGAAAGTGTGAATTACTGTCATCAGAATAATATTGTACATCTAGATTTAAAGCCAGAAAATTTGTTACTTGCTAGTAAATCCAAAGGGGCTGCAGTGAAACTAGCGGATTTCGGTCTGGCAATAGAAGTTCAGGGTGATCAGCCAGCTTGGTTTGGTTTTGCCGGCACACCTGGTTATCTTTCTCCAGAGGTGTTGCGTAAAGAACCATATGGTAAAGCGGTAGACGTCTGGGCTTGTGGCGTTATTCTTTACATCCTTCTTGTTGGATACCCACCATTCTGGGATGAAGATCAAAATCGATTGTACAGTCAAATCAAATCGGGAGCATATGATTATCCTTCACCAGAATGGGATACAGTCACCCCTGAAGCTAAGAATTTAATCAACTTAATGCTAACAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD171153             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        cCAATAGAAGTTCAGGGTGATCAGCCAGCTTGGTTTGGTTTTGCCGGCACACCTGGTTATCTTTCTCCAGAGGTGTTGCGTAAAGAACCATATGGTAAAGCGGTAGACGTCTGGGCTTGTGGCGTTATTCTTTACATCCTTCTTGTTGGATACCCACCATTCTGGGATGAAGATCAAAATCGATTGTACAGTCAAATCAAATCGGGAGCATATGATTATCCTTCACCAGAATGGGATACAGTTACCCCTGAAGCTAAGAATTTAATCAACTTAATGCTAACAGTCAGTCCTGCGAGGCGAATCACAGCTGCAGAAGCCCTCAAGCACCCACGGATTTGTACTTTAGATCAACGAGAACGTGTCGCTTCCCTTGTGCATCGTCAGGAGACGGTGGAGTGCTTGAAGAAATTCAATGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD189389             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GTTATTCTTTACATCCTTCTTGTTGGATACCCACCATTCTGGGATGAAGATCAAAATCGATTGTACAGTCAAATCAAATCGGGAGCATATGATTATCCTTCACCAGAATGGGATACAGTTACCCCTGAAGCTAAGAATTTAATCAACTTAATGCTAACAGTCAGTCCTGCGAGGCGAATCACAGCTGCAGAAGCCCTCAAGCACCCATGGATTTG         TCAACGAGAACGTGTCGCTTCCCTTGTGCATCGTCAGGAGACGGTGGAGTGCTTGAAGAAATTCAATGCACGACGTAAACTGAAGGGTGCTATACTTACGACTATGCTAGCCACACGTAATTTTTCCActggtcg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD062359             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ATTGTACAGTCAAATCAAATCGGGAGCATATGATTATCCTTCACCAGAATGGGATACAGTTACCCCTGAAGCTAAGAATTTAATCAACTTAATGCTAACAGTCAGTCCTGCGAGGCGAATCACAGCTGCAGAAGggt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD160443             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ATGGATTTG         TCAACGAGAACGTGTCGCTTCCCTTGTGCATCGTCAGGAGACGGCGGAGTGCTTGAAGAAATTCAATGCACGACGTAAACTGAAGGGTGCTATACTTACGACTATGCTAGCCACACGTAATTTTTCCATGAAAAAGGATGATAGTTCTGGTCGAGGTACCGTTCCAGGAAGTCATACTTCTGTGACTAAAAAGTCTAACGATGGTATTAAGGAATCGTCTGACAGCTCTACCGCAGTAATGGAGGACTCAGCTGATATAAAAACTTTCCCGCAATAACATATATCGAGATGTGTACTTACCGTTATTTGGATTCGCATTACGAACTAGTGGGTATTATTCGAAGAGGCAAAAAACAGGACATCATCCGGGCGACAGAACAACTATTGGCTGCTGCAGCAGCTGGAGATTTC AACTCTACCTTAAATTTTTGGATTCTCAATTCACTTAATTTCGGCCCAGAAGCATGGGGGGAATTTACTTTGAGGGGAGCGGATTTCCATAAGTTTTACTTTGAACAAATCATTTCCGGAATCAGGTTGTTCGCGGCTATTCACACCAGTTTACTCAACNCCGACTTGACATTTAATGGGTGAAGACGCAGTTTGTATTGGCTACAACAAACTTATTAAGGTCTTTAGATAAATGGGGTATGCCCCATAACCAAACAACAGAAGAAACCGGTGTTTGGGTAAAAACTATATGATCGGGGCTGGCAGAAGGTTCCTGGACATCCGT]
[-] EMBL CD163708             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CGAGAACGTGTCGCTTCCCTTGTGCATCGTCAGGAGACGGTGGAGTGCTTGAAGAAATTCAATGCACGACGTAAACTGAAGGGTGCTATACTTACGACTATGCTAGCCACACGTAATTTTTCCATGAAAAAGGATGATAGTTCTGGTCGAGGTACCGTTCCAGGAAGTCATACTTCTGTGACTAAAAAGTCTAACGATGGTATTAAGGAATCGTCTGACAGCTCTACCGCAGTAATGGAGGACTCAGCTGATATAAAAACTTTCCCGCAATAACATATATCGAGATGCGTACTTACCGTTATTTGTATTCGCATTACGAACTAGTGGGTATTATTCGAAGAGGCAAAAAACAGGACATCATCCGGGCGACAGAACAACTATTGGCTGCTGCAGCAGCTGGAGATTTCGAACTCTACCTTAAATTTTTGGATTCTCAATTCACTT ATTTCGATC                                                                                                                                                                                                                                                                                       ]
[-] EMBL CD180429             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GGTGGAGTGCTTGAAGAAATTCAATGCACGACGTAAACTGAAGGGTGCCATACTTACGACTATGCTAGCCACACGTAATTTTTCCATGAAAAAGGATGATAGTTCTGGTCGAGGTACCGTTCCAGGAAGTCATACTTCTGTGACTAAAAAGTCTAACGATGGTATTAAGGAATCGTCTGACAGCTCTACCGCAGTAATGGAGGACTCAGCTGATATAAAAACTTTCCCGCAATAACATATATCGAGATGCGTACTTACCGTTATTTGTATTCGCATTACGAACTAGTGGGTATTATTCGAAGAGGCAAAAAACAGGACATCATCCGGGCGACAGAACAACTATTGGCTGCTGCAGCAGCTGGAGATTTCGAACTCTACCTTAAATTTTTGGATTCTCAATTCACTT ATTTCGATCCAGAAGCATGCGGGaaga                                                                                                                                                                                                                                                                     ]
[-] EMBL CD163603             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TAAACTGAAGGGTGCTATACTTACGACTATGCTAGCCACACGTAATTTTTCCATGAAAAAGGATGATAGTTCTGGTCGAGGTACCGTTCCAGGAAGTCATACTTCTGTGACTAAAAAGTCTAACGATGGTATTAAGGAATCGTCTGACAGCTCTACCGCAGTAATGGAGGACTCAGCTGATATAAAAACTTTCCCGCAATAACATATATCGAGATGTGTACTTACCGTTATTTGTATTCGCATTACGAACTAGTGGGTATTATTCGAAGAGGCAAAAAACAGGACATCATCCGGGCGACAGAACAACTATTGGCTGCTGCAGCGGCTGGAGATTTCGAACTCTACCTTAAATTTTTGGATTCTCAATTCACTT ATTTCGATC                                                                                                                                                                                                                                                                                       ]




>consensus_10685#0
TTAGTTCTCTGAAGATGGCTACTGTTCTTCCAAAGTTTTCTGATTTGTATAGTTTGAAAG
AAGAAGTTGGGCGTGGAGCATTCTCAACTTCGAAATGCATTCAGCTCTCAACAGGTCTAG
AATTTGCCGCTAAGATCATAAATACGAAACGCCTGTCAACCAGAGACATGCAGAAGTTGG
AACGCGAGGCCAGAATATGCAGGCTTCTGAAGCACCCTAACATAGTTCGCCTATACGATG
ACATTCAGGACGAAGGGTTTCACTATCTCGTATTTGATTTAGTTACTGGTGGTGAACTCT
TCGAGGACATTGTTGCTCGGGAATTCTACAGTGAAGCGGATGCTAGTAACTGTATGCAGC
AAATTATTGAAAGTGTGAATTACTGTCATCAGAATAATATTGTACATCGAGATTTAAAGC
CAGAAAATTTGTTACTTGCTAGTAAATCCAAAGGGGCTGCAGTGAAACTAGCGGATTTCG
GTCTGGCAATAGAAGTTCAGGGTGATCAGCCAGCTTGGTTTGGTTTTGCCGGCACACCTG
GTTATCTTTCTCCAGAGGTGTTGCGTAAAGAACCATATGGTAAAGCGGTAGACGTCTGGG
CTTGTGGCGTTATTCTTTACATCCTTCTTGTTGGATACCCACCATTCTGGGATGAAGATC
AAAATCGATTGTACAGTCAAATCAAATCGGGAGCATATGATTATCCTTCACCAGAATGGG
ATACAGTTACCCCTGAAGCTAAGAATTTAATCAACTTAATGCTAACAGTCAGTCCTGCGA
GGCGAATCACAGCTGCAGAAGCCCTCAAGCACCCATGGATTTGTCAACGAGAACGTGTCG
CTTCCCTTGTGCATCGTCAGGAGACGGTGGAGTGCTTGAAGAAATTCAATGCACGACGTA
AACTGAAGGGTGCTATACTTACGACTATGCTAGCCACACGTAATTTTTCCATGAAAAAGG
ATGATAGTTCTGGTCGAGGTACCGTTCCAGGAAGTCATACTTCTGTGACTAAAAAGTCTA
ACGATGGTATTAAGGAATCGTCTGACAGCTCTACCGCAGTAATGGAGGACTCAGCTGATA
TAAAAACTTTCCCGCAATAACATATATCGAGATGTGTACTTACCGTTATTTGTATTCGCA
TTACGAACTAGTGGGTATTATTCGAAGAGGCAAAAAACAGGACATCATCCGGGCGACAGA
ACAACTATTGGCTGCTGCAGCAGCTGGAGATTTCGAACTCTACCTTAAATTTTTGGATTC
TCAATTCACTTATTTCGATCCAGAAGCATGGGGGGAATTTACTTTGAGGGGAGCGGATTT
CCATAAGTTTTACTTTGAACAAATCATTTCCGGAATCAGGTTGTTCGCGGCTATTCACAC
CAGTTTACTCAACNCCGACTTGACATTTAATGGGTGAAGACGCAGTTTGTATTGGCTACA
ACAAACTTATTAAGGTCTTTAGATAAATGGGGTATGCCCCATAACCAAACAACAGAAGAA
ACCGGTGTTTGGGTAAAAACTATATGATCGGGGCTGGCAGAAGGTTCCTGGACATCCGT

consensusID : consensus_10685#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 757
fasta sequence

                              [ACCCATGGATTTGTACTTTAGATCAACGAGAACGTGTCGCTTCCCTTGTGCATCGTCAGGAGACGGTGGAGTGCTTGAAGAAATTCAATGCACGACGTAAACTGAAGGGTGCTATACTTACGAGTATGCTAGCCACACGTAATTTTTCCATGAAAAAGGATGATAGTTCTGGTCGAGGTACCGTTCCAGGAAGTCATACTTCTGTGACTAAAAAGTCTAACGATGGTATTAAGGAATCGTCTGACAGCTCTACCGCAGTAATGGAGGACTCAGCTGATATAAAAAAATTATTGGCATGTAGTACCATTGTCAAAGCAGAGAGCTCTGTTGAAAGCAAAAAACAGGACATCATCCGGGCGACAGAACAACTATTGGCTGCTGCAGCAGCTGGAGATTTCGAACTCTACCTTAAATTTTTGGATTCTCAATTCACTTATTTCGGTCCAGAAGCATGTGGGAATTTACTTGAAGGAGCCGATTTCCATAAGTTTTACTTTGAACAAATCATTCCGAAATCAGTTGTTCGCGCTATTCACACCAGTATACTCAACCCGACTGTACATTTAATGGGTGAAGACGCAGCTTGTATTGCCTACACAAGACTTACTCA-GTTTCTAGATAAATGTGGTATGCCCCATACACAACAAACAGAAGAAACCCGTGTTTGGGTAAGACGTAATGATCGTGGCTGGCAGAATGTTCATGTACATCGTTCGTGTTTATCAGCAGGGGGGTTCAGACCAATCACTAGTGAATT]

[-] EMBL CD122145             [ACCCATGGATTTGTACTTTAGATCAACGAGAACGTGTCGCTTCCCTTGTGCATCGTCAGGAGACGGTGGAGTGCTTGAAGAAATTCAATGCACGACGTAAACTGAAGGGTGCTATACTTACGAGTATGCTAGCCACACGTAATTTTTCCATGAAAAAGGATGATAGTTCTGGTCGAGGTACCGTTCCAGGAAGTCATACTTCTGTGACTAAAAAGTCTAACGATGGTATTAAGGAATCGTCTGACAGCTCTACCGCAGTAATGGAGGACTCAGCTGATATAAAAAAATTATTGGCATGTAGTACCATTGTCAAAGCAGAGAGCTCTGTTGAAAGCAAAAAACAGGACATCATCCGGGCGACAGAACAACTATTGGGTGCTGCAGCAGCTGGAGATTTCGAACTCTACCTTAAATTTTTGGATTCTCAATTCACTTATTT                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD123251             [                                                                                                                                                                TGATAGTTCTGGTCGAGGTACCGTTCCAGGAAGTCATACTTCTGTGACTAAAAAGTCTAACGATGGTATTAAGGAATCGTCTGACAGCTCTACCGCAGTAATGGAGGACTCAGCTGATATAAAAAAATTATTGGCATGTAGTACCATTGTCAAAGCAGAGAGCTCTGTTGAAAGCAAAAAACAGGACATCATCCGGGCGACAGAACAACTATTGGCTGCTGCAGCAGCTGGAGATTTCGAACTCTACCTTAAATTTTTGGATTCTCAATTCACTTATTTCGGTCCAGAAGCATGTGG                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD165177             [                                                                                                                                                                                                                            CGATGGTATTAAGGAATCGTCTGACAGCTCTACCGCAGTAATGGAGGACTCAGCTGGTATAAAAAAATTATTGGCATGTAGTACCATTGTCAAAGCAGAGAGCTCTGTTGAGAGCAAAAAACAGGACATCATCCGGGCGACAGAACAACTATTGGCTGCTGCAGCAGCTGGAGATTTCGAACTCTACCTTANATTTTTGGATTCTCAATTCACTTATTTCGGTCCAGAAGCATGTGGGAATTTACTTGAAGGAGCCGATTTCCATAAGTTTTACTTTGAANCAATCATTCC                                                                                                                                                                                                                                                       ]
[-] EMBL CD142946             [                                                                                                                                                                                                                                                                                                                                                               TCCGGGCGACAGAGCAACTATTGGCTGCTGCAGCAGCTGGAGATTTCGAACTCTACCTTAAATTTTTGGATTCTCAATTCACTTATTTCGGTCCAGAAGCATGTGGGAATTTACTTGAAGGAGCCGATTTCCATAAGTTTTACTTTGAACAAATCATTCCGAAATCAGTTGTTCGCGCTATTCACACCAGTATACTCAACCCGACTGTACATTTAATGGGTGAAGACGCAGCTTGTATTGCCTACACAAGACTTACTCA GTTTCTGGATAAATGCGGTATGCCCCATACACAACAAACAGAAGAAACCCGTGTTTGGGTAAGACGTAATGATCGTGGCTGGCAGAATGTTCATGTACATCGTTCGTGTT                                     ]
[+] EMBL CD131180             [                                                                                                                                                                                                                                                                                                                                                                           AACAACTATTGGCTGCTGCAGCAGCTGGAGATTTCGAACTCTACCTTAAATTTTTGGATTCTCAATTCACTTATTTCGGTCCAGAAGCATGTGGGAATTTACTTGAAGGAGCCGATTTCCATAAGTTTTACTTTGAACAAATCATTCCGAAATCAGTTGTTCGCGCTATTCACACCAGTATACTCAACCCGACTGTACATTTAATGGGTGAAGACGCAGCTTGTATTGCCTACACAAGACTTACTCA GTTTCTAGATNAATGTGGTATGCCCCATACACAACAAACAGAAGAAACCCGTGTTTGGGTAAGACGTAATGATCGTGGCTt                                                                  ]
[-] EMBL CD091329             [                                                                                                                                                                                                                                                                                                                                                                                                                      caTTAAATTTATGGATTCTCAATTCACTTATTTCGGTCCAGAAGCATGTGGGAATTTACTTGAAGGAGCCGATTTCCATAAGTTTTACTTTGAACAAATCATTCCGAAATCAGTTGTTCGCGCTATTCACACCAGTATAGTGAACCCGACTGTACATTTAATGGGTGAAGACGCAGCTTGTATTGCCTACACAAGACTCCCCCACGTTTATAGATAAATGTGGTATGCCCCATACACAACAAACAGAAGAAACCCGTGTTTGGGTAAGACGTAATGATCGTGGGTGGCAGAATGTTCATGTACATCGTTCGTGTTTATCAGCAGGGGGGTTCAGACCAATCACTAGTGAATT]




>consensus_10685#1
ACCCATGGATTTGTACTTTAGATCAACGAGAACGTGTCGCTTCCCTTGTGCATCGTCAGG
AGACGGTGGAGTGCTTGAAGAAATTCAATGCACGACGTAAACTGAAGGGTGCTATACTTA
CGAGTATGCTAGCCACACGTAATTTTTCCATGAAAAAGGATGATAGTTCTGGTCGAGGTA
CCGTTCCAGGAAGTCATACTTCTGTGACTAAAAAGTCTAACGATGGTATTAAGGAATCGT
CTGACAGCTCTACCGCAGTAATGGAGGACTCAGCTGATATAAAAAAATTATTGGCATGTA
GTACCATTGTCAAAGCAGAGAGCTCTGTTGAAAGCAAAAAACAGGACATCATCCGGGCGA
CAGAACAACTATTGGCTGCTGCAGCAGCTGGAGATTTCGAACTCTACCTTAAATTTTTGG
ATTCTCAATTCACTTATTTCGGTCCAGAAGCATGTGGGAATTTACTTGAAGGAGCCGATT
TCCATAAGTTTTACTTTGAACAAATCATTCCGAAATCAGTTGTTCGCGCTATTCACACCA
GTATACTCAACCCGACTGTACATTTAATGGGTGAAGACGCAGCTTGTATTGCCTACACAA
GACTTACTCAGTTTCTAGATAAATGTGGTATGCCCCATACACAACAAACAGAAGAAACCC
GTGTTTGGGTAAGACGTAATGATCGTGGCTGGCAGAATGTTCATGTACATCGTTCGTGTT
TATCAGCAGGGGGGTTCAGACCAATCACTAGTGAATT

consensusID : consensus_10685#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 335
fasta sequence

                              [TTCAATGCACGACGTAAACTGAAGGGTGCTATACTTACGACTATGCTAGCCACACGTAATTTTTCCACTGGTCGAGGTACCGTTCCAGGAAGTCATACTTCTGTGACTAAAAAGTCTAACGATGGTATTAAGGAATCGTCTGACAGCTCTACCGCAGTAATGGAGGACTCAGCTGATATAAAAAAATTATTGGCATGTAGTACCATTGTCAAAGCAGAGAGCTCTGTTGAAAGCAAAAAACAGGACATCATCCGGGCGACAGAACAACTATTGGCTGCTGCAGACAGCTGGAGATTTCGAACTCTACCTTAAATTTTTGGATTCTCAATTCACTT]

[-] EMBL CD132156             [TTCAATGCACGACGTAAACTGAAGGGTGCTATACTTACGACTATGCTAGCCACACGTAATTTTTCCACTGGTCGAGGTACCGTTCCAGGAAGTCATACTTCTGTGACTAAAAAGTCTAACGATGGTATTAAGGAATCGTCTGACAGCTCTACCGCAGTAATGGAGGACTCAGCTGATATAAAAAAATTATTGGCATGTAGTACCATTGTCAAAGCAGAGAGCTCTGTTGAAAGCAAAAAACAGGACATCATCCGGGCGACAGAACAACTATTGGCTGCTGCAGACAGCTGGAGATTTCGAACTCTACCTTAAATTTTTGGATTCTCAATTCACTT]




>consensus_10685#2
TTCAATGCACGACGTAAACTGAAGGGTGCTATACTTACGACTATGCTAGCCACACGTAAT
TTTTCCACTGGTCGAGGTACCGTTCCAGGAAGTCATACTTCTGTGACTAAAAAGTCTAAC
GATGGTATTAAGGAATCGTCTGACAGCTCTACCGCAGTAATGGAGGACTCAGCTGATATA
AAAAAATTATTGGCATGTAGTACCATTGTCAAAGCAGAGAGCTCTGTTGAAAGCAAAAAA
CAGGACATCATCCGGGCGACAGAACAACTATTGGCTGCTGCAGACAGCTGGAGATTTCGA
ACTCTACCTTAAATTTTTGGATTCTCAATTCACTT

consensusID : consensus_10685#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 296
fasta sequence

                              [TTTGTGGTTACTTAGGTTGATGCACAGGTTCTACATTTTTTAGTTTAGATGACTAACAGTTCACCTTGTTTGAAGTGAAGAATCTCACTAATATTAGAAGGCTGTGTACACTGAACCTTAGTGGATACACGGAGAATCGTAGTTCGAGATTCTCAGTTGATCTCTCTATTCGTTTCTTTTTTCGTTAAACAGGCAAAAAACAGGACATCATCCGGGCGACAGAACAACTATTGGCTGCTGCAGCAGCTGGAGATTTCGAACTCTACCTTAAATTTTTGGATTCTCAATTCACTTAT]

[-] EMBL CD087655             [TTTGTGGTTACTTAGGTTGATGCACAGGTTCTACATTTTTTAGTTTAGATGACTAACAGTTCACCTTGTTTGAAGTGAAGAATCTCACTAATATTAGAAGGCTGTGTACACTGAACCTTAGTGGATACACGGAGAATCGTAGTTCGAGATTCTCAGTTGATCTCTCTATTCGTTTCTTTTTTCGTTAAACAGGCAAAAAACAGGACATCATCCGGGCGACAGAACAACTATTGGCTGCTGCAGCAGCTGGAGATTTCGAACTCTACCTTAAATTTTTGGATTCTCAATTCACTTAT]




>consensus_10685#3
TTTGTGGTTACTTAGGTTGATGCACAGGTTCTACATTTTTTAGTTTAGATGACTAACAGT
TCACCTTGTTTGAAGTGAAGAATCTCACTAATATTAGAAGGCTGTGTACACTGAACCTTA
GTGGATACACGGAGAATCGTAGTTCGAGATTCTCAGTTGATCTCTCTATTCGTTTCTTTT
TTCGTTAAACAGGCAAAAAACAGGACATCATCCGGGCGACAGAACAACTATTGGCTGCTG
CAGCAGCTGGAGATTTCGAACTCTACCTTAAATTTTTGGATTCTCAATTCACTTAT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10685#1      ------------------------------------------------------------
consensus_10685#2      ------------------------------------------------------------
consensus_10685#0      TTAGTTCTCTGAAGATGGCTACTGTTCTTCCAAAGTTTTCTGATTTGTATAGTTTGAAAG 60
consensus_10685#3      ------------------------------------------------------------
                                                                                   

consensus_10685#1      ------------------------------------------------------------
consensus_10685#2      ------------------------------------------------------------
consensus_10685#0      AAGAAGTTGGGCGTGGAGCATTCTCAACTTCGAAATGCATTCAGCTCTCAACAGGTCTAG 120
consensus_10685#3      ------------------------------------------------------------
                                                                                   

consensus_10685#1      ------------------------------------------------------------
consensus_10685#2      ------------------------------------------------------------
consensus_10685#0      AATTTGCCGCTAAGATCATAAATACGAAACGCCTGTCAACCAGAGACATGCAGAAGTTGG 180
consensus_10685#3      ------------------------------------------------------------
                                                                                   

consensus_10685#1      ------------------------------------------------------------
consensus_10685#2      ------------------------------------------------------------
consensus_10685#0      AACGCGAGGCCAGAATATGCAGGCTTCTGAAGCACCCTAACATAGTTCGCCTATACGATG 240
consensus_10685#3      ------------------------------------------------------------
                                                                                   

consensus_10685#1      ------------------------------------------------------------
consensus_10685#2      ------------------------------------------------------------
consensus_10685#0      ACATTCAGGACGAAGGGTTTCACTATCTCGTATTTGATTTAGTTACTGGTGGTGAACTCT 300
consensus_10685#3      ------------------------------------------------------------
                                                                                   

consensus_10685#1      ------------------------------------------------------------
consensus_10685#2      ------------------------------------------------------------
consensus_10685#0      TCGAGGACATTGTTGCTCGGGAATTCTACAGTGAAGCGGATGCTAGTAACTGTATGCAGC 360
consensus_10685#3      ------------------------------------------------------------
                                                                                   

consensus_10685#1      ------------------------------------------------------------
consensus_10685#2      ------------------------------------------------------------
consensus_10685#0      AAATTATTGAAAGTGTGAATTACTGTCATCAGAATAATATTGTACATCGAGATTTAAAGC 420
consensus_10685#3      ------------------------------------------------------------
                                                                                   

consensus_10685#1      ------------------------------------------------------------
consensus_10685#2      ------------------------------------------------------------
consensus_10685#0      CAGAAAATTTGTTACTTGCTAGTAAATCCAAAGGGGCTGCAGTGAAACTAGCGGATTTCG 480
consensus_10685#3      ------------------------------------------------------------
                                                                                   

consensus_10685#1      ------------------------------------------------------------
consensus_10685#2      ------------------------------------------------------------
consensus_10685#0      GTCTGGCAATAGAAGTTCAGGGTGATCAGCCAGCTTGGTTTGGTTTTGCCGGCACACCTG 540
consensus_10685#3      ------------------------------------------------------------
                                                                                   

consensus_10685#1      ------------------------------------------------------------
consensus_10685#2      ------------------------------------------------------------
consensus_10685#0      GTTATCTTTCTCCAGAGGTGTTGCGTAAAGAACCATATGGTAAAGCGGTAGACGTCTGGG 600
consensus_10685#3      ------------------------------------------------------------
                                                                                   

consensus_10685#1      ------------------------------------------------------------
consensus_10685#2      ------------------------------------------------------------
consensus_10685#0      CTTGTGGCGTTATTCTTTACATCCTTCTTGTTGGATACCCACCATTCTGGGATGAAGATC 660
consensus_10685#3      ------------------------------------------------------------
                                                                                   

consensus_10685#1      ------------------------------------------------------------
consensus_10685#2      ------------------------------------------------------------
consensus_10685#0      AAAATCGATTGTACAGTCAAATCAAATCGGGAGCATATGATTATCCTTCACCAGAATGGG 720
consensus_10685#3      ------------------------------------------------------------
                                                                                   

consensus_10685#1      ------------------------------------------------------------
consensus_10685#2      ------------------------------------------------------------
consensus_10685#0      ATACAGTTACCCCTGAAGCTAAGAATTTAATCAACTTAATGCTAACAGTCAGTCCTGCGA 780
consensus_10685#3      ------------------------------------------------------------
                                                                                   

consensus_10685#1      ----------------------ACCCATGGATTTGTACTTTAGATCAACGAGAACGTGTC 38
consensus_10685#2      ------------------------------------------------------------
consensus_10685#0      GGCGAATCACAGCTGCAGAAGCCCTCAAGCACCCATGGATTTG-TCAACGAGAACGTGTC 839
consensus_10685#3      ------------------------------------------------------------
                                                                                   

consensus_10685#1      GCTTCCCTTGTGCATCGTCAGGAGACGGTGGAGTGCTTGAAGAAATTCAATGCACGACGT 98
consensus_10685#2      ---------------------------------------------TTCAATGCACGACGT 15
consensus_10685#0      GCTTCCCTTGTGCATCGTCAGGAGACGGTGGAGTGCTTGAAGAAATTCAATGCACGACGT 899
consensus_10685#3      ------------------------------------------------------------
                                                                                   

consensus_10685#1      AAACTGAAGGGTGCTATACTTACGAGTATGCTAGCC-ACACGTAATTTTTCCATGAAAAA 157
consensus_10685#2      AAACTGAAGGGTGCTATACTTACGACTATGCTAGCC-ACACGTAATTTTTCCA------- 67
consensus_10685#0      AAACTGAAGGGTGCTATACTTACGACTATGCTAGCC-ACACGTAATTTTTCCATGAAAAA 958
consensus_10685#3      ------------------TTTGTGGTTACTTAGGTTGATGCACAGGTTCTACATT----- 37
                                          **  *  **     *   *  *  *  ** * **       

consensus_10685#1      GGATGATAGTTCTGGTCGAGGTACCGTTCCAGGAAGTCATACTTCTGTGACTAAAAAGTC 217
consensus_10685#2      -----------CTGGTCGAGGTACCGTTCCAGGAAGTCATACTTCTGTGACTAAAAAGTC 116
consensus_10685#0      GGATGATAGTTCTGGTCGAGGTACCGTTCCAGGAAGTCATACTTCTGTGACTAAAAAGTC 1018
consensus_10685#3      ---------TTTTAGTTTAGATGAC----TAACAGTTCACCTTGTTTGAAGTGAAGAATC 84
                                   * **  ** *  *     *  *  ***   *  *   * * ** * **

consensus_10685#1      TAACGATGGTATTAAGGAATCGTCTGACAGCTCTACCGCAGTAATGGAGGACTCAGCTGA 277
consensus_10685#2      TAACGATGGTATTAAGGAATCGTCTGACAGCTCTACCGCAGTAATGGAGGACTCAGCTGA 176
consensus_10685#0      TAACGATGGTATTAAGGAATCGTCTGACAGCTCTACCGCAGTAATGGAGGACTCAGCTGA 1078
consensus_10685#3      TCAC--TAATATTAGAAGGCTGTGT-ACA-CTGAACCTTAGTGGATACACGGAGAATCGT 140
                       * **  *  *****       ** * *** **  ***  ***            *   * 

consensus_10685#1      TATAAAAA---------AAT------TATTGGCATGTAG---TACCATTGT--------- 310
consensus_10685#2      TATAAAAA---------AAT------TATTGGCATGTAG---TACCATTGT--------- 209
consensus_10685#0      TATAAAAACTTTCCCGCAATAACATATATCGAGATGTGTACTTACCGTTATTTGTATTCG 1138
consensus_10685#3      AGTTCGAG-------------------ATTCTCAGTTGA---TCTCTCTAT--------- 169
                         *   *                    **    *  *     *  *  * *         

consensus_10685#1      -----CAAAGCAGAGAGCTCTGTTGAAAG---CAAAAAACAGGACATCATCCGGGCGACA 362
consensus_10685#2      -----CAAAGCAGAGAGCTCTGTTGAAAG---CAAAAAACAGGACATCATCCGGGCGACA 261
consensus_10685#0      CATTACGAACTAGTGGGTATTATTCGAAGAGGCAAAAAACAGGACATCATCCGGGCGACA 1198
consensus_10685#3      -------TCGTTTCTTTTTTCGTTAAACA-GGCAAAAAACAGGACATCATCCGGGCGACA 221
                                             **  *     ****************************

consensus_10685#1      GAACAACTATTGGCTGCTGCAG-CAGCTGGAGATTTCGAACTCTACCTTAAATTTTTGGA 421
consensus_10685#2      GAACAACTATTGGCTGCTGCAGACAGCTGGAGATTTCGAACTCTACCTTAAATTTTTGGA 321
consensus_10685#0      GAACAACTATTGGCTGCTGCAG-CAGCTGGAGATTTCGAACTCTACCTTAAATTTTTGGA 1257
consensus_10685#3      GAACAACTATTGGCTGCTGCAG-CAGCTGGAGATTTCGAACTCTACCTTAAATTTTTGGA 280
                       ********************** *************************************

consensus_10685#1      TTCTCAATTCACTTATTTCGGTCCAGAAGCATGTGGG-AATTTACTTGAAGG--AGCCGA 478
consensus_10685#2      TTCTCAATTCACTT---------------------------------------------- 335
consensus_10685#0      TTCTCAATTCACTTATTTCGATCCAGAAGCATGGGGGGAATTTACTTTGAGGGGAGCGGA 1317
consensus_10685#3      TTCTCAATTCACTTAT-------------------------------------------- 296
                       **************                                              

consensus_10685#1      TTTCCATAAGTTTTACTTTGAACAAATCATT-CCGAAATCAG-TTGTTCGCG-CTATTCA 535
consensus_10685#2      ------------------------------------------------------------
consensus_10685#0      TTTCCATAAGTTTTACTTTGAACAAATCATTTCCGGAATCAGGTTGTTCGCGGCTATTCA 1377
consensus_10685#3      ------------------------------------------------------------
                                                                                   

consensus_10685#1      CACCAGTATACTCAACCC-GACTGTACATTTAATGGGTGAAGACGCAGCTTGTATTGCCT 594
consensus_10685#2      ------------------------------------------------------------
consensus_10685#0      CACCAGTTTACTCAACNCCGACTTGACATTTAATGGGTGAAGACGCAGTTTGTATTGGCT 1437
consensus_10685#3      ------------------------------------------------------------
                                                                                   

consensus_10685#1      ACACAAGACTTACTCAG-TTTCTAGATAAATGTGGTATGCCCCATACACAACAAACAGAA 653
consensus_10685#2      ------------------------------------------------------------
consensus_10685#0      ACAACAAACTTATTAAGGTCTTTAGATAAATGGGGTATGCCCCATAACCAAACAACAGAA 1497
consensus_10685#3      ------------------------------------------------------------
                                                                                   

consensus_10685#1      GAAACCCGTGTTTGGGTAAGACGTA-ATGATCGTGGCTGGCAGAATGTTCATGTACATCG 712
consensus_10685#2      ------------------------------------------------------------
consensus_10685#0      GAAACCGGTGTTTGGGTAAAAACTATATGATCGGGGCTGGCAGAAGGTTCCTGGACATCC 1557
consensus_10685#3      ------------------------------------------------------------
                                                                                   

consensus_10685#1      TTCGTGTTTATCAGCAGGGGGGTTCAGACCAATCACTAGTGAATT 757
consensus_10685#2      ---------------------------------------------
consensus_10685#0      GT------------------------------------------- 1559
consensus_10685#3      ---------------------------------------------