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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10695#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1290 fasta sequence
[AATCCTCACAATCCCATCCTAATCAGAGTTACGAATAGCAAAGCTCTCGAGATAATGGAAAGTAAGCGTAAATCCATCGGAAATTTATGTTCAAGTCTATGCCGTAAAATATATATATTTCATTTATCCAGATAGCAGTACTGGCGACTCCTGAAATCTAGTACTTCTAAAAGTAAATGGTTATGACTGATCGAGTTAATGGTCTAGTTCTGTGTTTATATTCACCAATCCATTTCATATCTGATGTGCATCCCGTCCCGAATACCTGCCTATATTTTTGTACAGTAGGTTTATTGT-CTTTTCT--A-GCGGATTCAGTCCAAAGATGACCCACTGAAAAACTCCTCTCCAATCAAATTGCTGCCTAACAATGTCTGTTGGGATCGTTTATGGTGACCAGTATAGACAGCTGTGTTGCAGCTCACCTAAGTTTGGCGACAGATACGCCTTGGTCATGGATTTGATCAATGCATACAAACTCATTCCAGAACTTTCTCGTGTGCCTCCCTTGCAGTGGGATTCACCTAGTCGTATGTATGAAGCAGTGACTGCCTTTCACTCTACAGAATATGTTGATGCTCTTAAAAAATTACAAATGCTTCACTGTGAGGAGAAAGAATTGACTGCTGATGACGAGTTACTTATGGATTCATTTAGTCTGAATTATGACTGCCCTGGTTTTCCTAGTGTTTTCGATTATTCGTTAGCTGCTGTTCAAGGTAGTTTAGCTGCAGCTAGTGCTTTAATCTGTCGTCATTGTGAGGTCGTTATCAACTGGGGCGGTGGGTGGCATCATGCCAAGAGAAGTGAGGCTTCTGGATTTTGCTATTTAAATGATATCGTTTTGGCCATCCATCGACTGGTCTCATCAACCCCACCAGAAACTTCACCCAACAGACAAACACGAGTATTGTATGTTGACCTTGATCTCCATCATGGTGATGGAGTAGAAGAAGCTTTCTGGTATAGTCCTCGTGTAGTTACGTTCTCTGTACATCATGCCTCTCCTGGTTTCTTTCCC-NGTACAGGCACCTGGAATAT-GGTCGACAATGATAAATTACCGATTTTCCTAAATGGCGCTGGTCGTGGCAGGTTCTCGGCATTCAATTTGCCACTAGAAGAAGGCATCAATGATTTGGACTGGTCAAATGCTATTGGCCCTATACTTGATTCTCTTAACATAGTTATTCAACCAAGTTATGTTGTAGTTCAATGCGGAGCCGATTGTTTAGCTACTGATCCACATCGAATATTTCGTTTAACTAATTTTTACCCTAATTTAAATTTAAATTC]
[+] EMBL CD167110 [AATCCTCACAATCCCATCCTAATCAGAGTTACGAATAGCAAAGCTCTCGAGATAATGGAAAGTAAGCGTAAATCCATCGGAAATTTATGTTCAAGTCTATGCCGTAAAATATATATATTTCATTTATCCAGATAGCAGTACTGGCGACTCCTGAAATCTAGTACTTCTAAAAGTAAATGGTTATGACTGATCGAGTTTATGGTCTAGTTCTGTGTTTATATTCACCAATCCATTTCATATCTGATGTGCATCC ]
[+] EMBL CD167124 [AATCCTCACAATCCCATCCTAATCAGAGTTACGAATAGCAAAGCTCTCGAGATAATGGAAAGTAAGCGTAAATCCATCGGAAATTTATGTTCAAGTCTATGCCGTAAAATATATATATTTCATTTATCCAGATAGCAGTACTGGCGACTCCTGAAATCTAGTACTTCTAAAAGTAAATGGTTATGACTGATCGAGTTAATGGCCTAGTTCTGGGTTAATATTCACCAATCCATTTCATATCTGATGTGCATCCCGTCCCGAATAC ]
[-] EMBL CD182321 [ GTACTGGCGACTCCTGAAATCTAGTACTTCTANAAGTAAATGGTTATGACTGATCGAGTTAATGGTCTAGTTCTGTGTTTATATTCACCAATCCATTTCATATCTGATGTGCATCCCGTCCCGAATACCTGCCTATATTTTTGTACAGTAGGTTTATTGT CTTTTCT A GCGGATTCAGTCCAAAGATGACCCACTGAAAAACTCCTCTCCAATCAAATTGCTGCCTAACAATGTCTGTTGGGATCGTTTATGGTGACCAGTATAGACAGCTGTGTTGCAGCTCACCTAAGTTTGGCGACAGATACGCCTTGGTCATGGATTTGATCAATGCATACAAACTCATTCCAGAA ]
[+] EMBL AI975433 [ tttactcTTGTGATTTGCTGCATGCGGATTCAGTCCAAAGATGACCCACTGAAAAACCCCTCTCCAATCAAATTGCTGCCTAACAATGTCTGTTGGGATCGTTCATGGTGACCAGTATAGACAGCTGTGTTGCAGCTCACCTAAGTTTGGCGACAGATACACCTTGGTCATGGATTTGATCAATGCATACAAACTCATTCCAGAACTTTCTCGTGTGCCTCCCTTGCAGTGGGATTCACCTAGTCGTATGTATGAAGCAGTGACTGCCTTTCACTCTACAGAATATGTTGATGCTCTTAAAAAATTACAAATGCTTCACTGTGAGGAGAAAGAATTGACTGCTGATGACGAGCTACTTATGGATTCATTTAGTCTGAATTATGACTGCCCTGGTTTTCCTAGTGTTTTCGATTATACGTTAGCTGCTGCCCAAGGTAGTTTAGCTGCAGCTAGTGCTATAATCTGTC ]
[+] EMBL CD149150 [ TGCAGCTCACCTAAGTTTGGCGACAGATACGCCTTGGTCATGGATTTGATCAATGCATACAAACTCATTCCAGAACTTTCTCGTGTGCCTCCCTTGCAGTGGGATTCACCTAGTCGTATGTATGAAGCAGTGACTGCCTTTCACTCTACAGAATATGTTGATGCTCTTAAAAAATTACAAATGCTTCACTGTGAGGAGAAAGAATTGACTGCTGATGACGAGTTACTTATGGATTCATTTAGTCTGAATTATGACTGCCCTG ]
[+] EMBL CD149240 [ TGCAGCTCACCTAAGTTTGGCGACAGATACGCCTTGGTCATGGATTTGATCAATGCATACAAACTCATTCCAGAACTTTCTCGTGTGCCTCCCTTGCAGTGGGATTCACCTAGTCGTATGTATGAAGCAGTGACTGCCTTTCACTCTACAGAATATGTTGATGCTCTTAAAAAATTACAAATGCTTCACTGTGAGGAGAAAGAATTGACTGCTGATGACGAGTTACTTATGGATTCATTTAGTCTGAATTATGACTGCCCTGGTTTTCCTAATGTTTTCGATTATTCGTTAGCTGCTGTTC ]
[+] EMBL CD149206 [ TGCAGCTCACCTAAGTTTGGCGACAGATACGCCTTGGTCATGGATTTGATCAATGCATACAAACTCATTCCAGAACTTTCTCGTGTGCCTCCCTTGCAGTGGGATTCACCTAGTCGTATGTATGAAGCAGTGACTGCCTTTCACTCTACAGAATATGTTGATGCTCTTAAAAAATTACAAATGCTTCACTGTGAGGAGAAAGAATTGACTGCTGATGACGAGTTACTTATGGATTCATTTAGTCTGAA ]
[+] EMBL CD096229 [ GCTCACCTAAGTTTGGCGACAGATACGCCTTGGTCATGGATTTGATCAATGCATACAAACTCATTCCAGAACTTTCTCGTGTGCCTCCCTTGCAGTGGGATTCACCTAGTCGTATGTATGAAGCAGTGACTGCCTTTCACTCTACAGAATATGTTGATGCTCTTAAAAAATTACAAATGCTTCACTGTGAGGAGAAAGAATTGACTGCTGATGACGGGTTACTTATGGATTCATTTAGTCTGAATTATGACTGCCCTGGTTTTCCTAGTGTTTTCGATTATTCGTTAGCTGCTGTTCAAGGTAGTTTAGCTGCAGCTAGTGCTTTAATCTGTCGTCATTGTGAGGTCGTTATCAACTGGGGCGGTGGGTGGCATCATGCCAAGAGAAGTGAGGCTTCTGGATTTTGCTATTTAAATGATATCGTTTTGGCCATCCATCGACTGGTCTCATCAACCCCACCAGAAACTTCACCCAACAGACAAACACGAGTATTGTATGTTGACCTTGATCTCCATCATGGTGATGGAGTAGAAGAAGCTTTCTGGTATAGTCCTCGTGTAGTTACGTTCTCTGTGCATCATGCCTCTNCTGGTTNCTTTCCCNNGTACA GCACCTGNAATATGGGTCGAC ATGATAAATTACCGATTnt ]
[+] EMBL CD096175 [ GCTCACCTAAGTTTGGCGACAGATACGCCTTGGTCATGGATTTGATCAATGCATACAAACTCATTCCAGAACTTTCTCGTGTGCCTCCCTTGCAGTGGGATTCACCTAGTCGTATGTATGAAGCAGTGACTGCCTTTCACTCTACAGAATATGTTGATGCTCTTAAAAAATTACAAATGCTTCACTGTGAGGAGAAAGAATTGACTGCTGATGACGAGTTACTTATGGATTCATTTAGTCTGAATTATGACTGCCCTGGTTTTCCTAGTGTTTTCGATTATTCGTTAGCTGCTGTTCAAGGTAGTTTAGCTGCAGCTAGTGCTTTAATCTGTCGTCATTGTGAGGTCGTTATCAACTGGGGCGGTGGGTGGCATCATGCCAAGAGAAGTGAGGCGTCTGGA TTTGCTATTTAAATGATATCGTTTTGGCCATCCATCGACTGGTCTCATCAACCCCACCAGAAACTTCACCCAACAGACANACACGAGTATTGTATGTTGACCTTGATCTCCATCATGGTGATGGAGTANAAGAAGCTTTCTGGTATAGTCCTCGTGTAGTTACGTTCTCTGTACATCATGCCTCTCCTGGTTTCTTTCCC GTACAGGCACCTGGAATAT GGTCGACAATGATAAATTACCGATTTT ]
[+] EMBL AI977133 [ TTGCAGTGGGATTCACCTAGTCGTATGTATGAAGCAGTGACTGCCTTTCACTCTACAGAATATGTTGATGCTCTTAAAAAATTACAAATGCTTCACTGTGAGGAGAAAGAATTGACTGCTGATGACGAGTTACTTATGGATTCATTTAGTCTGAATTATGACTGCCCTGGTTTTCCTAGTGTTTTCGATTATTCGTTAGCTGCTGTTCAAGGTAGTTTAGCTGCAGCTAATGCTTTAATCTGTCGTCATTGTGAGGTCGTTATCAACTGGGGCGGTGGGTGGCATCATGCCAAGAGAAGTGAGGCTTCTGGATTTTGCTATTTAAATGATGTCGTTTTGGCCATCCATCGACTGGTCTCATCAACCCCACCAGAAATTTCACCCAACAGACAAACACGAGTATTGTATGTTGACCTTGATCTCCATCATGGTGATGGAGTAGAAGAAGCTCTCTGGTATAGTCCTCGGGTAGg ]
[+] EMBL AI975691 [ TGGGATTCACCTAGTCGTATGTATGAAGCAGTGACTGCCTTTCACTCTACAGAATATGTTGATGCTCTTAAAAAATTACAAATGCTTCACTGTGAGGAGAAAGAATTGACTGCTGATGACGAGTTACTTATGGATTCATTTAGTCTGAATTATGACTGCCCTGGTTTTCCTAGTGTTTTCGATTATTCGTTAGCTGCTGTTCAAGGTAGTTTAGCTGCAGCTAGTGCTTTAATCTGTCGTCATTGTGAGGTCGTTATCAACTGGGGCGGTGGGTGGCATCATGCCAAGAGAAGTGAGGCTTCTGGATTTTGCTATTTAAATGATATCGTTTTGGCCATCCATCGACTGGTCTCATCAACCCCACCAGAAACTTCACCCAACAGACAAACACGAGTATTGTATGTTGACCTTGATCTCCATCATGGTGATGGAGTAGAAGAAGCTNTCTGGTATAGTCCTCGTGTAGTTACGTTCTCTGTACATC ]
[-] EMBL CD114007 [ TTGATGCTCTTAAACCATTACAGAGGCTTCACTGTGAGGAGAAAGAATTGACTGCTGAGGACGAGTTACTTATGGATTCATTTAGTGTGGATTAAGACTGCCCTGGTTTTCATAGTGTCTTCGATTATTCGTTAGCTGCTGTTCAAGGTAGTTTAGCTGCAGCTAGTGCTTTAATCTGTCGTCATTGTGAGGTCGTTATCAACTGGGGCGGTGGGTGGCATCATGCCAAGAGAAGTGAGGCTTCTGGATTCAGCTATTTAAATGATATCGTCTTGGCCATCCATCGACTGGTCTCATCAACCCCCCCAGCAGTTTCACCCAACAGTCAAACACGAGTATCGTATGTTGTCCTTGATATCCATCATGGTGATGGAGTAGA ]
[+] EMBL CD145081 [ TTCTGGATTTTGCTATTTAAATGATATCGTTTTGGCCATCCATCGACTGGTCTCATCAACCCCACCAGAAACTTCACCCAACAGACAAACACGAGTATTGTATGTTGACCTTGATCTCCATCATGGTGATGGAGTAGAAGAAGCTTTCTGGTATAGTCCTCGTGTAGTTACGTTCTCTGTACATCATGCCTCTCCTGGTTTCTTTCCC GGTACAGGCACCTGGAATAT GGTCGACAATGATAAATTACCGATTTTCCTAAATGGCGCTGGTCGTGGCAGGTTCTCGGCATTCAATTTGCCACTAGAAGAAGGCATCAATGATTTGGACTGGTCAAATGCTATTGGCCCTATACTTGATTCTCTTAACATAGTTATTCAACCAAGTTATGTTGTAGTTCAATGCGGAGCCGATTGTTTAGCTACTGATCCACATCGAATATTTCGTTTAACTAATTTTTACCCTAATTTAAATTTAAATTC]
consensusID : consensus_10695#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 673 fasta sequence
[TACAGCTCACCTAAGTTTGGCGACAGATACGCCTTGGTCATGGATTTGATCAATGCATACAAACTCATTCCAGAACTTTCTCGTGTGCCTCCCTTGCAGTGGGATTCACCTAGTCGTATGTATGAAGCAGTGACTGCCTTTCACTCTACAGAATATGTTGATGCTCTTAAAAAATTACAAATGCTTCACTGTGAGGAGAAAGAATTGACTGCTGATGACGAGTTACTTATGGATTCATTTAGTCTGAATTATGACTGCCCTGGTTTTCCTAGTGTTTTCGATTATTCGTTAGCTGCTGTTCAAGGTAGTTTAGCTGCAGCTAATGCTTTAATCTGTCGTCATTGTGAGGTAAAACTCTTTACACTTCATCTTCAGGGTAAAAGTATCGATTGAGTATTATAATACTTAGTTNTTTGTCATTCCTGTTTCCTATTAAACACAACGTTGTGTTTCTATTATTGTTGTTTGTGTTCCACCTCTGATTTAGCCATAACTTAAGTAAAATAAGTTGAGTTTTTTTTTAATTTTAAAGTGAATTCTAAATCCCAGAAGAAATTCTCGTCAAAAAACAACAGTCATTGTTATAAAATACTTTTTAAGAAAAATTGTTTGCTATTTTTGGGTAATAAGGTGTTTTATTCCTTTCCCTTCGTGTAAGATCGACTTTATCACA]
[+] EMBL CD149457 [TACAGCTCACCTAAGTTTGGCGACAGATACGCCTTGGTCATGGATTTGATCAATGCATACAAACTCATTCCAGAACTTTCTCGTGTGCCTCCCTTGCAGTGGGATTCACCTAGTCGTATGTATGAAGCAGTGACTGCCTTTCACTCTACAGAATATGTTGATGCTCTTAAAAAATTACAAATGCTTCACTGTGAGGAGAAAGAATTGACTGCTGATGACGAGTTACTTATGGATTCATTTAGTCTGAATTATGACTGCCCTGGTTTTCCTAGTGTTTTCGATTATTCGTTAGCTGCTGTTCAAGGTAGTTTAGCTGCAGCTAATGCTTTAATCTGTCGTCATTGTGAGGTAAAACTCTTTACACTTCATCTTCAGGGTAAAAGTATCGATTGAGTATTATAATACTTAGTTNTTTGTCATTCC ]
[-] EMBL CD149624 [ AAAAATTACAAATGCTTCACTGTGAGGAGAAAGAATTGACTGCTGATGACGAGTTACTTATGGATTCATTTAGTCTGAATTATGACTGCCCTGGTTTTCNTAGTGTTTTCGATTATTCGTTAGCTGCTGTTCAAGGTAGTTTAGCTGCAGCTAATGCTTTAATCTGTCGTCATTGTGAGGTAAAACTCTTTACACTTCATCTTCAGGGTAAAAGTATCGATTGAGTATTATAATACTTAGTTTTTTGTCATTCCTGTTTCCTATTAAACACAACGTTGTGTTTCTATTATTGTTGTTTGTGTTCCACCTCTGATTTAGCCATAACTTAAGTAAAATAAGTTGAGTTTTTTTTTAATTTTAAAGTGAATTCTAAATCCCAGAAGAAATTCTCGTCAAAAAACAACAGTCATTGTTATAAAATACTTTTTAAGAAAAATTGTTTGCTATTTTTGGGTAATAAGGTGTTTTATTCCTTTCCCTTCGTGTAAGATCGACTTTATCACA]
consensusID : consensus_10695#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 669 fasta sequence
[ACTCGGCTCGAGGACGATCCACATCGAATATTTCGTTTAACTAATTTTTACCCTAATTTAAATTTACATTCTGAGTCGCAATCTGAATCTAAATTTAAATTAGGGTAAAAATTAGATTCAGATTGCGACTCAGAATGTAGTTTAAGTGGCTATTTGTACGCTATTAAGAAAATTTTATCATGGAAAGTTCCAACTTTAATACTTGGAGGTGGTGGCTACAATTTTCCGGATACAGCCAGACTATGGACAAGAGTTACAGCTCTGACAATTGAAGAAGTTAAGGGTAAAAAGATGACACTTTCCCCTGAAATTCCAGAACACTCCTACTTCTCTCGTTATGGTCCAGATTTCGAACTAGACATTGATTATTTTCCACACAAAAGTCATAATAAAACACTTGACAGTATACAAAAACATCATCGTCGTATACTTGAACAGTTACGTAATTATGCTGATCTAAATAAAACACTTGACAGTATACAAAAACATCATCGTCGTATACTTGAACAGTTACGTAATTATGCTGATCTAAATAAACTGATTTATGACTATGATCAAGTGTATCAATTATATAATTTAACTGGTATGTAAAATGTAGCTATAAATTTATCCTCTGTTTACCATGGATTTATTGCTCCAAACGTTNTTACTGATGCGATTCTACAGTTT]
[+] EMBL CD082231 [ACTCGGCTCGAGGACGATCCACATCGAATATTTCGTTTAACTAATTTTTACCCTAATTTAAATTTACATTCTGAGTCGCAATCTGAATCTAAATTTAAATTAGGGTAAAAATTAGATTCAGATTGCGACTCAGAATGTAGTTTAAGTGGCTATTTGTACGCTATTAAGAAAATTTTATCATGGAAAGTTCCAACTTTAATACTTGGAGGTGGTGGCTACAATTTTCCGGATACAGCCAGACTATGGACAAGAGTTACAGCTCTGACAATTGAAGAAGTTAAGGGTAAAAAGATGACACTTTCCCCTGAAATTCCAGAACACTCCTACTTCTCTCGTTATGGTCCAGATTTCGAACTAGACATTGATTATTTTCCACACAAAAGTCATAATAAAACACTTGACAGTATACAAAAACATCATCGTCGTATACTTGAACAGTTACGTAATTATGCTGATCTAAATAAAACACTTGACAGTATACAAAAACATCATCGTCGTATACTTGAACAGTTACGTAATTATGCTGATCTAAATAAACTGATTTATGACTATGATCAAGTGTATCAATTATATAATTTAACTGGTATGTAAAATGTAGCTATAAATTTATCCTCTGTTTACCATGGATTTATTGCTCCAAACGTTNTTACTGATGCGATTCTACAGTTT]
consensusID : consensus_10695#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 394 fasta sequence
[ACAGCTCTGACAATTGAAGAAGTTAAGGGTAAAAAGATGACACTTTCCCCTGAAATTCCAGAACACTCCTACTTCTCTCGTTATGGTCCAGATTTCGAACTAGACATTGATTATTTTCCACACGAAAGTCATAATAAAACACTTGACAGTATACAAAAACATCATCGTCGTATACTTGAACAGTTACGTAATTATGCTGATCTAAATAAACTGATTTATGCCTATGATCAAGTGTATCAATTATATAATTTAACTGGTATGTAAAATGTAGCTATAAATTTATCCTCTGTTTACCATGGATTTATTGCTCCAAACGTTTTTACTGATGCGATTCTACAGTTTTATCTCTGTAAAGAAAAATACATATATGTTGTTTTCCAANAAAAAAAAAAAA]
[-] EMBL AI395652 [ACAGCTCTGACAATTGAAGAAGTTAAGGGTAAAAAGATGACACTTTCCCCTGAAATTCCAGAACACTCCTACTTCTCTCGTTATGGTCCAGATTTCGAACTAGACATTGATTATTTTCCACACGAAAGTCATAATAAAACACTTGACAGTATACAAAAACATCATCGTCGTATACTTGAACAGTTACGTAATTATGCTGATCTAAATAAACTGATTTATGCCTATGATCAAGTGTATCAATTATATAATTTAACTGGTATGTAAAATGTAGCTATAAATTTATCCTCTGTTTACCATGGATTTATTGCTCCAAACGTTTTTACTGATGCGATTCTACAGTTTTATCTCTGTAAAGAAAAATACATATATGTTGTTTTCCAANAAAAAAAAAAAA]
consensusID : consensus_10695#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 391 fasta sequence
[TTTTTTTTTTTTTTTTTTTTAAACAGAGGATAAATTTATAGCTACATTTTACATACCAGTTAAATTATATAATTGATACACTTGATCATAGGCATAAATCAGTTTATTTAGATCAGCATAATTACGTAACTGTTCAAGTATACGACGATGATGTTTTTGTATACTGTCAAGTGTTTTATTATGACTTTCGTGTGGAAAATAATCAATGTCTAGTTCGAAATCTGGACCATAACGAGAGAAGTAGGAGTGTTCTGGAATTTCAGGGGAAAGTGTCATCTTTTTACCCTTAACTTCTTCAATTGTCAGAGCTGTAACTCTTGTCCATAATCTGGCTGTATCCGGGAAATTGTAGCCACCACCTCCAAGTATTAAAGTTGGGACTTTCCAAGGT]
[+] EMBL AI395026 [TTTTTTTTTTTTTTTTTTTTAAACAGAGGATAAATTTATAGCTACATTTTACATACCAGTTAAATTATATAATTGATACACTTGATCATAGGCATAAATCAGTTTATTTAGATCAGCATAATTACGTAACTGTTCAAGTATACGACGATGATGTTTTTGTATACTGTCAAGTGTTTTATTATGACTTTCGTGTGGAAAATAATCAATGTCTAGTTCGAAATCTGGACCATAACGAGAGAAGTAGGAGTGTTCTGGAATTTCAGGGGAAAGTGTCATCTTTTTACCCTTAACTTCTTCAATTGTCAGAGCTGTAACTCTTGTCCATAATCTGGCTGTATCCGGGAAATTGTAGCCACCACCTCCAAGTATTAAAGTTGGGACTTTCCAAGGT]
[-] EMBL CD145009 [ TAGCTACATTTTACATACCAGTTAAATTATATAATTGATACACTTGATCATAGTCATAAATCAGTTTATTTAGATCAGCATAATTACGTAACTGTTCAAGTATACGACGATGATGTTTTTGTATACTGTCAAGTGTTTTATTATGACTTTCGTGTGGAAAATAATCAATGTCTAGTTCGAAATCTGGACCATAACGAGAGAAGTAGGAGTGTTCTGGAATTTCAGGGGAAAGTGTCATCTTTTTACCCTTAACTTCTTCAATTGTCA ]
consensusID : consensus_10695#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 355 fasta sequence
[TGGCGACAGATACGCCTTGGTCATGGATTTGATCAATGCATACAAACTCATTCCAGAACTTTCTCGTGTGCCTCCCTTGCAGTGGGATTCACCTAGTCGTATGCATGAAGCAGTGACTGCCTTTCACTCGTAAGTATTTCCGTAGATTATTAGAGTGGTCTAGTTTACTAATCAATCACTTTAATAAGTAAAATAAGTCAAATTCAGTACTTGAATCATAATTACTTAGCTACTTTCTTTTGTTGTCTACTTCTAACATTTAACAAAAAGTCAATTGGGCTAGTTAGGTTTTCTTAGTCGCTAACCACTTTGGACAAAAACCGGTTTTACTTTTGGACACTTTTAAAAGTATCTT]
[+] EMBL CD125044 [TGGCGACAGATACGCCTTGGTCATGGATTTGATCAATGCATACAAACTCATTCCAGAACTTTCTCGTGTGCCTCCCTTGCAGTGGGATTCACCTAGTCGTATGCATGAAGCAGTGACTGCCTTTCACTCGTAAGTATTTCCGTAGATTATTAGAGTGGTCTAGTTTACTAATCAATCACTTTAATAAGTAAAATAAGTCAAATTCAGTACTTGAATCATAATTACTTAGCTACTTTCTTTTGTTGTCTACTTCTAACATTTAACAAAAAGTCAATTGGGCTAGTTAGGTTTTCTTAGTCGCTAACCACTTTGGACAAAAACCGGTTTTACTTTTGGACACTTTTAAAAGTATCTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10695#0 AATCCTCACAATCCCATCCTAATCAGAGTTACGAATAGCAAAGCTCTCGAGATAATGGAA 60
consensus_10695#1 ------------------------------------------------------------
consensus_10695#5 ------------------------------------------------------------
consensus_10695#2 ------------------------------------------------------------
consensus_10695#3 ------------------------------------------------------------
consensus_10695#4 ------------------------------------------------------------
consensus_10695#0 AGTAAGCGTAAATCCATCGGAAATTTATGTTCAAGTCTATGCCGTAAAATATATATATTT 120
consensus_10695#1 ------------------------------------------------------------
consensus_10695#5 ------------------------------------------------------------
consensus_10695#2 ------------------------------------------------------------
consensus_10695#3 ------------------------------------------------------------
consensus_10695#4 ------------------------------------------------------------
consensus_10695#0 CATTTATCCAGATAGCAGTACTGGCGACTCCTGAAATCTAGTACTTCTAAAAGTAAATGG 180
consensus_10695#1 ------------------------------------------------------------
consensus_10695#5 ------------------------------------------------------------
consensus_10695#2 -----------------------------------------------ACTCGGCTCGAGG 13
consensus_10695#3 ------------------------------------------------------------
consensus_10695#4 ------------------------------------------------------------
consensus_10695#0 TTATGACTGATCGAGTTAATGGTCTAGTTCTGTGTTTATATTCACCAATCCATTTCATAT 240
consensus_10695#1 ------------------------------------------------------------
consensus_10695#5 ------------------------------------------------------------
consensus_10695#2 ACGATCCACATCGAATATTTCGTTTAACTAATTTTTACCCTAATTTAAATTTACATTCTG 73
consensus_10695#3 ------------------------------------------------------------
consensus_10695#4 ------------------------------------------------------------
consensus_10695#0 CTGATGTGCATCCCGTCCCGAATACCTGCCTATATTTTTGTACAGTAGGTTTATTGTCTT 300
consensus_10695#1 ------------------------------------------------------------
consensus_10695#5 ------------------------------------------------------------
consensus_10695#2 AGTCGCAATCTGAATCTAAATTTAAATTAGGGTAAAAATTAGATTCAGATTGCGACTCAG 133
consensus_10695#3 ------------------------------------------------------------
consensus_10695#4 ------------------------------------------------------------
consensus_10695#0 TTCTAGCGGATTCAGTCCAAAGATGACCCACTGAAAAACTCCTCTCCAATCAAATTGCTG 360
consensus_10695#1 ------------------------------------------------------------
consensus_10695#5 ------------------------------------------------------------
consensus_10695#2 AATGTAGTTTAAGTGGCTATTTGTACGCTATTAAGAAAATTTTATCATGGAAAGTTCCAA 193
consensus_10695#3 ------------------------------------------------------------
consensus_10695#4 ------------------------------------------------------------
consensus_10695#0 CCTAACAATGTCTGTTGGGATCGTTTATGGTGACCAGTATAGACAGCTGTGTTGCAGCTC 420
consensus_10695#1 ----------------------------------------------------TACAGCTC 8
consensus_10695#5 ------------------------------------------------------------
consensus_10695#2 CTTTAATACTTGGAGGTGGTGGCTACAATTTTCCGGATACAGCCAGACTATGGACAAGAG 253
consensus_10695#3 ------------------------------------------------------------
consensus_10695#4 ------------------------------------------------------------
consensus_10695#0 ACCTAAGTTTGGCGACAGAT-ACGCCTTGGTCATGGATTTGATCAATGCATACAAACTCA 479
consensus_10695#1 ACCTAAGTTTGGCGACAGAT-ACGCCTTGGTCATGGATTTGATCAATGCATACAAACTCA 67
consensus_10695#5 ---------TGGCGACAGAT-ACGCCTTGGTCATGGATTTGATCAATGCATACAAACTCA 50
consensus_10695#2 TTACAGCTCTGACAATTGAAGAAGTTAAGGGTAAAAAGATGACACTTTCCCCTGAA---A 310
consensus_10695#3 --ACAGCTCTGACAATTGAAGAAGTTAAGGGTAAAAAGATGACACTTTCCCCTGAA---A 55
consensus_10695#4 -TTTTTTTTTTTTTTTTTTTTAAACAGAGGATAAATTTATAGCTACATTTTACATACCAG 59
* * ** * * *
consensus_10695#0 TTCCAGAACTTTCTCGTGTGCCTCCCTTGCAGTGGGATTCACCTAGTCGTATGTATGAAG 539
consensus_10695#1 TTCCAGAACTTTCTCGTGTGCCTCCCTTGCAGTGGGATTCACCTAGTCGTATGTATGAAG 127
consensus_10695#5 TTCCAGAACTTTCTCGTGTGCCTCCCTTGCAGTGGGATTCACCTAGTCGTATGCATGAAG 110
consensus_10695#2 TTCCAGAACACTCC----TACTTCTCTCGTTATGG------TCCAGAT-TTCGAACTAGA 359
consensus_10695#3 TTCCAGAACACTCC----TACTTCTCTCGTTATGG------TCCAGAT-TTCGAACTAGA 104
consensus_10695#4 TT---AAATTATATAATTGATACACTTGATCATAGGCATAAATCAGTTTATTTAGATCAG 116
** ** * * * * **
consensus_10695#0 CAGTGACTGCCTT-TCACTCTACAGAAT-ATGTTGATGCTCTTAAAAAATTACAAATGCT 597
consensus_10695#1 CAGTGACTGCCTT-TCACTCTACAGAAT-ATGTTGATGCTCTTAAAAAATTACAAATGCT 185
consensus_10695#5 CAGTGACTGCCTT-TCACTC------GT-AAGT--ATTTCCGTAGATTATTAGAGTGGTC 160
consensus_10695#2 CATTGATTATTTT-CCACACAAAAG-TC-ATAATAAAACACTTGACAGTATACAAAAACA 416
consensus_10695#3 CATTGATTATTTT-CCACACGAAAG-TC-ATAATAAAACACTTGACAGTATACAAAAACA 161
consensus_10695#4 CA-TAATTACGTAACTGTTCAAGTATACGACGATGATGTTTTTGTATACTGTCAAGTGTT 175
** * * * * * * * * *
consensus_10695#0 TCACTGTGAGGAG---AAAGAATTGACTGCTGATGACGAGTTACTTATGGATTCATTTAG 654
consensus_10695#1 TCACTGTGAGGAG---AAAGAATTGACTGCTGATGACGAGTTACTTATGGATTCATTTAG 242
consensus_10695#5 TAGTTTACTAATC---AATCACTTTAATAAGTAAAATAAGTCA------AATTCAGT--A 209
consensus_10695#2 TCATCGTCGTATACTTGAACAGTTACGTAATTATGCTGATCTAA--ATAAAACACTTGAC 474
consensus_10695#3 TCATCGTCGTATA----------------------------------------------- 174
consensus_10695#4 TTATTATGACTTTCGTGTGGAAAATAATCAATGT-CTAGTTCGAAATCTGGACCATAACG 234
*
consensus_10695#0 TCTGAATTATGACTGCCCTGGT-TTTCCTAGTGTTTTCGATTATTCGTTAGCTGCTGTTC 713
consensus_10695#1 TCTGAATTATGACTGCCCTGGT-TTTCCTAGTGTTTTCGATTATTCGTTAGCTGCTGTTC 301
consensus_10695#5 CTTGAATCATAATTACTTAGCTACTTTCTTTTGTTGTCTACT-TCTAACATTTAACAAA- 267
consensus_10695#2 AGTATACAAAAACATCATCGTCGTATACTTGAACAGTTACGTAATTATGCTGATCTAAAT 534
consensus_10695#3 ---------------------------CTTGAACAGTTACGTAATTATGCTGATCTAAAT 207
consensus_10695#4 AGAGAAGTAGGAGTGTTCTGGAATTTCAGGGGAAAGT------GTCATCTTTTTACCCTT 288
*
consensus_10695#0 AAGGTAGTTTA--GCTG-CAGCTAGTGCTTTAATC-TGTCGTC--ATTGTGAGGTCGTTA 767
consensus_10695#1 AAGGTAGTTTA--GCTG-CAGCTAATGCTTTAATC-TGTCGTC--ATTGTGAGGTAA--- 352
consensus_10695#5 AAGTCAATTGG--GCTA-GTTAGGTTTTCTTAGTC-GCTAACC--ACTTTGGACAAA--- 318
consensus_10695#2 AAACTGATTTATGACTATGATCAAGTGTATCAATTATATAATTTAACTGGTATGTAAAAT 594
consensus_10695#3 AAACTGATTTATGCCTATGATCAAGTGTATCAATTATATAATTTAACTGGTATGTAAAAT 267
consensus_10695#4 AACTTCTTCAATTGTCA-GAGCTGTAACTCTTGTC-CATAATCTGGCTGTATCCGGGA-- 344
** * * * *
consensus_10695#0 TCAACTGGGGCGGTGGGTGGCATCATGCCAAGAGAAGTGAGGCTTCTGGATTTTGCTATT 827
consensus_10695#1 --AACT----CTTTACACTTCATCTTCAGGGTAAAAGTATCGATTGAGTATTATAATACT 406
consensus_10695#5 --AACCGG--TTTTACTTTTGGACACTTT--TAAAAGTATCTT----------------- 355
consensus_10695#2 GTAGCTATAAATTTATCCTCTGTTTACCA--TGGATTTATTGCTCCAA-ACGTTNTTACT 651
consensus_10695#3 GTAGCTATAAATTTATCCTCTGTTTACCA--TGGATTTATTGCTCCAA-ACGTTTTTACT 324
consensus_10695#4 --AATTGTAGCCACCACCTCCAAGTATTA--AAGTTGGGACTTTCCAAGGT--------- 391
*
consensus_10695#0 TAAATGATATCGTTTTGGCCATCCATCGACTGGTCTCATCAACCCCACCAGAAACTTCAC 887
consensus_10695#1 TAGTTN--------TTTGTCATTCCT--GTT--TCCTATTAAACACAACGTTGTGTTTCT 454
consensus_10695#5 ------------------------------------------------------------
consensus_10695#2 GATGCGA-------TTCTACAGTTT----------------------------------- 669
consensus_10695#3 GATGCGA-------TTCTACAGTTTTATCTCTGTAAAGAAAAATACATATATGTTGTTTT 377
consensus_10695#4 ------------------------------------------------------------
consensus_10695#0 CCAACAGACAAACACGAGTATTGTATGTTGACCTTGATCT--CCATCATGGTGATGGAGT 945
consensus_10695#1 ATTATTGTTG---------TTTGTGTTCCACCTCTGATTTAGCCATAACTTAAGTAAAAT 505
consensus_10695#5 ------------------------------------------------------------
consensus_10695#2 ------------------------------------------------------------
consensus_10695#3 CCAANAAAAAAAAAAAA------------------------------------------- 394
consensus_10695#4 ------------------------------------------------------------
consensus_10695#0 AGAAGAAGCTTTCTGGTATAGTCCTCGTGTAGTTACGTTCTCTGTACATCATGCCTCTCC 1005
consensus_10695#1 AAGTTGAGTTTTTTTTTAATTTTAAAGTGAATTCTAAATCCCAGAAGA----AATTCTCG 561
consensus_10695#5 ------------------------------------------------------------
consensus_10695#2 ------------------------------------------------------------
consensus_10695#3 ------------------------------------------------------------
consensus_10695#4 ------------------------------------------------------------
consensus_10695#0 TGGTTTCTTTCCCNGTACAGGCACCTGGAATA-TGGTCGACAATGATAAATTACCGATTT 1064
consensus_10695#1 TCAAAAAACAACAGTCATTGTTA--TAAAATACTTTTTAAGAAAAATTGTTTGCTATTTT 619
consensus_10695#5 ------------------------------------------------------------
consensus_10695#2 ------------------------------------------------------------
consensus_10695#3 ------------------------------------------------------------
consensus_10695#4 ------------------------------------------------------------
consensus_10695#0 TCCTAAATGGCGCTGGTCGTGGCAGGTTCTCGGCATTCAATTTGCCACTAGAAGAAGGCA 1124
consensus_10695#1 TGGGTAATAAGGTGTTTTATTCCTTTCCCTTCGTGTA-AGATCGACTTTATCACA----- 673
consensus_10695#5 ------------------------------------------------------------
consensus_10695#2 ------------------------------------------------------------
consensus_10695#3 ------------------------------------------------------------
consensus_10695#4 ------------------------------------------------------------
consensus_10695#0 TCAATGATTTGGACTGGTCAAATGCTATTGGCCCTATACTTGATTCTCTTAACATAGTTA 1184
consensus_10695#1 ------------------------------------------------------------
consensus_10695#5 ------------------------------------------------------------
consensus_10695#2 ------------------------------------------------------------
consensus_10695#3 ------------------------------------------------------------
consensus_10695#4 ------------------------------------------------------------
consensus_10695#0 TTCAACCAAGTTATGTTGTAGTTCAATGCGGAGCCGATTGTTTAGCTACTGATCCACATC 1244
consensus_10695#1 ------------------------------------------------------------
consensus_10695#5 ------------------------------------------------------------
consensus_10695#2 ------------------------------------------------------------
consensus_10695#3 ------------------------------------------------------------
consensus_10695#4 ------------------------------------------------------------
consensus_10695#0 GAATATTTCGTTTAACTAATTTTTACCCTAATTTAAATTTAAATTC 1290
consensus_10695#1 ----------------------------------------------
consensus_10695#5 ----------------------------------------------
consensus_10695#2 ----------------------------------------------
consensus_10695#3 ----------------------------------------------
consensus_10695#4 ----------------------------------------------
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||