These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10697#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 20 consensus length = 547 fasta sequence [TAAGAGGTCTTGAGACTCCAAGGTTTCGAC-GGGGTCCACACTGCGTCCTTGAGAGTGCCCGTGACTTCGCTGCCCTCGGAATCCGTGACCTTGACGTCCTTGAGGGTTCCATTGGCGACAGCAAACTTCAGCGCATCACCAGGCTGGAGCTCGGTGATCGGGTGGTCTGCGGCGATTGTCAGAGTGGCGGGGGTTGGGGTCGGAGTAGGCGTCGGGGTGGCAGAGTTCCCACTAGAGCCAAAACCATTACCAACGGAGGTCTTGGCGCAGGCAGCGGCTGTCATTGGCAAAGCGACGGCACCTGTAGCCAGAACCGAACGACGGGTCAGTCTCGATGGCACAGTACCTCCATGATTGTGTG-CGCGAAATGAGAACTCTGATTCATTTTTT-AGGGGAAGATGAACGGGATA-CATGATAC-AGCGCGGC-GCTGGCGCCTCCCTAAACGTCGATACGTCATCTGGAGCGCCGTTCACT-AAACGCTAACCGGCTGGATCGGGGGAGTTGTGACGTGAAGCTACTCTGGCATCTGCATCCCCTCATGCGACCC] [+] EMBL CD143676 [TAAGAGGTCTTGAGACTCCAAGGTTTCGAC GGGGTCCACACTGCGTCCTTGAGAGTGCCCGTGACTTCGCTGCCCTCGGAATCCGTGACCTTGACGTCCTTGAGGGTTCCATTGGCGACAGCAAACTTCAGCGCATCACCAGGCTGGAGCCCGGTGATCGGGTGGTCTGCGGCGATTGTCAGAGTGGCGGGGGTTGGGGTCGGAGTAGGCGTCGGGGTGGCAGAGTTCCCACTAGAGCCAAAACCATTACCAACGGAGGTCTTGGCGCAGGCAGCGGCTGTCATTGGCAAAGCGACGGCACCTGTAGCCAGAACCGAACGACGGGTCAGTCTCGATGGCACAGTACCTCCATGATTGTGTG CGCGAGATGAGAACTCTGATTCATTTCTT AGGGGAAGATGAACGGGATA CATGATAC AGCGCGGC GCTGGCGCCTCCCTAAACGTCGATACGTCATCTGGAGCGCCGTTCACT GAACGCNTACCGGCTGGATCGGGAGAGTTGTGACGCGACGCTACTCTGGCATCTGCATCCCCTCATGCGACCC] [+] EMBL CD143603 [TAAGAGGTCTTGAGACTCCAAGGTTTCGAC GGGGTCCACACTGCGTCCTTGAGAGTGCCCGTGACTTCGCTGCCCTCGGAATCCGTGACCTTGACGTCCTTGAGGGTTCCATTGGCGACAGCAAACTTCAGCGCATCACCAGGCTGGAGCTCGGTGATCGGGTGGTCTGCGGCGATTGTCAGAGTGGCGGGGGTTGGGGTCGGAGTAGGCGTCGGGGTGGCAGAGTTCCCACTAGAGCCAAAACCATTACCAACGGAGGTCTTGGCGCAGGCAGCGGCTGTCATTGGCAAAGCGACGGCACCTGTAGCCAGAACCGAACGACGGGTCAGTCTCGATGGCACAGTACCTCCATGATTGTGTG CGCGAAATGAGAACTCTGATTCATTTCTT AGGGGAAGATGAACGGGATA CATGATAC AGCGCGGC GCTGGCGCCTCCCTAAACGTCGATACGTCATCTGGAGCGCCGTTCACT GAACGCTAACCGGCTGGATCGGGAGAGTTGTGACGCGACGCTACTCTGGCATCTGCATCCCCTCATGCGACCC] [+] EMBL CD143626 [TAAGAGGTCTTGAGACTCCAAGGTTTCGAC GGGGTCCACACTGCGTCCTTGAGAGTGCCCGTGACTTCGCTGCCCTCGGAATCCGTGACCTTGACGTCCTTGAGGGTTCCATTGGCGACAGCAAACTTCAGCGCATCACCAGGCTGGAGCTCGGTGATCGGGTGGTCTGCGGCGATTGTCAGAGTGGCGGGGGTTGGGGTCGGAGTAGGCGTCGGGGTGGCAGAGTTCCCACTAGAGCCAAAACCATTACCAACGGAGGTCTTGGCGCAGGCAGCGGCTGTCATTGGCAAAGCGACGGCACCTGTAGCCAGAACCGAACGACGGGTCAGTCTCGATGGCACAGTACCTCCATGATTGTGTG CGCGAAATGAGAACTCTGATTCATTTCTT AGGGGAAGATGAACGGGATA CATGATAC AGCGCGGC GCTGGCGCCTCCCT AACGTCGATACGTCATCTGGAGCGCCNGTCACTGAAACGCTAACC GCTGGATCGGGAGAGTTGTGACGCGACGCTACTCTGGCATCTG ] [+] EMBL CD070715 [TAAGAGGTCTTGAGACTCCAAGGTTTCGACGGGGGTCCACACTGCGTCCTTGAGAGTGCCCGTGACCTCGCTGCCCTCGGAATCCGTGACTTTGACGTCCTTGAGGGTTCCATTGGCGACAGCAAACTTCAGCGCATCACCTGGCTGGAGCTCGGTGATCGGGTGGTCTGCGGTGATTGTCAGAGTGGCGGGGGTTGGGGTCGGAGTAGGCGTCGGGGTGGCAGAGTTCCCACTAGAGCCAAAGCCGTTACCAACGGAGGTCTTGGCGC ] [+] EMBL CD070585 [TAAGAGGTCTTGAGACTCCAAGGTTTCGAC GGGGTCCACACTGCGTCCTTGAGAGTGCCCGTGACCTCGCTGCCCTCGGAATCCGTGACTTTGACGTCCTTGAGGGTTCCATTGGCGACAGCAAACTTCAGCGCATCACCTGGCTGGAGCTCGGTGATCGGGTGGTCTGCGGTGATTGTCAGAGTGGCGGGGGTTGGGGTCGGAGTAGGCGTCGGtg ] [-] EMBL CD070600 [ ACGGAGGTCTTGGCGCAGGCAGCGGCTGTCATTGGCAAAGCGACGGCACCTGTAGCCAGAACCGAACGACGGGTCAGTCTCGATGGCACAGTACCTCCATGATTGTGTG CGCGAAATGAGAACTCTGATTCATTTTTT AGGGGAAGATGAACGGGATA CATGATAC AGCGCGGC GCTGGCGCCTCCCTAAACGTCGATACGTCATCTGGAGCGCCGTTCACT AAACGCTAACCGGCTGGATCGGGGGAGTTGTGACGTGAAGCTACTCTGGCATCTGC ] [-] EMBL CD070696 [ AGGTCTTGGCGCAGGCAGCGGCTGTCATTGGCGAAGCGACGGCACCTGTAGCCAGAACCGAACGACGGGTCAGTCTCGATGGCACAGTACCTCCATGATTGCGTG CGCGAAATGAGAACTCTGATTCATTTCTT AGGGGAAGATGAACGGGATA CATGATAC AGCGCGGC GCTGGCGCCCCCCTAAACGTCGATACGTCATCTGGAGCGCCGTTCACT GAACGCTAACCGGCTGGATCGGGAGAGTTGTGACGCGACGCTACTCTGGCATCTGC ] [-] EMBL CD070703 [ GCAGAGCGACGGCACCTGTAGCCAGAACCGAACGACGGGTCAGTCTCGATGGCACAGTACCTCCATGATTGTGTG CGCGAAATGAGAACTCTGATTCATTTTTT AGGGGAAGATGAACGGGATA CATGATAC AGCGCGGC GCTGGCGCCTCCCTAAACGTCGATACGTCATCTGGAGCGCCGTTCACT AAACGCTAACCGGCTGGATCGGGGGAGTTGTGACGTGAAGCTACTCTGGCATCTGC ] [-] EMBL CD070586 [ CCTGTAGCCAGAACCGAACGACGGGTCAGTCTCGATGGCACAGTACCTCCATGATTGTGTG CGCGAAATGGGAACTCTGATTCATTTTTT AGGGGAAGATGAACGGGATA CATGATAC AGCGCGGC GCTGGCGCCTCCCTAAACGTCGATACGTCATCTGGAGCGCCGTTCACT AAACGCTAACCGGCTGGATCGGGGGAGTTGTGACGTGAAGCTACTCTGGCATCTGC ] [-] EMBL CD070658 [ GACGGGTCAGTCTCGATGGCACAGTACCTCCATGACTGTGTG CGCGAAATGAGAACTCTGATTCATTTTTC AGGGGAAGATGAACGGGATA CATGATAC AGCGCGGC GCTGGCGCCTCCCTAAACGTCGATACGTCATCTGGAGCGCCGTTCACT AAACGCTAACCGGCTGGATCGGGGGAGTTGTGACGTGAAGCTACACTGGCATCTGC ] [-] EMBL CD070579 [ GATTGTGTGCCGCGAAATGAGAACTCTGATTCATTTTTT AGGGGAAGATGAACGGGATA CATGATAC AGCGCGGC GCTGGCGCCTCCCTAAACGTCGATACGTCATCTGGAGCGCCGTTCACT AAACGCTAACCGGCTGGATCGGGGGAGTTGTGACGTGAAGCTACTCTGGCATCTGC ] [-] EMBL CD070609 [ TGTG CGCGAAATGAGAACTCTGATTCATTTTTTAAGGGGAAGATGAACGGGATA CATGATAC AGCGCGGC GCTGGCGCCTCCCTAAACGTCGATACGTCATCTGGAGCGCCGTTCACT AAACGCTAACCGGCTGGATCGGGGGAGTTGTGACGTGAAGCTACTCTGGCATCTGC ] [-] EMBL CD070678 [ GTG CGCGAAATGAGAACTCTGATTCATTTTNT AGGGGAAGATGAACGGGGTA CATGATGC AGCGCGGC GCTGGCGCCTCCCTAAACGTCGACACGTCATCTGGAGCGCCGTTCACT AAACGCTAACCGGCTGGATCGGGGGAGTTGTGACGTGAAGCTACTCTGGCATCTGC ] [-] EMBL CD070650 [ G CGCGAAATGAGAACTCTGATTCATTTTTT AGGGGAAGATGAACGGGATA CATGATAC AGCGCGGC GCTGGCGCCTCCCTAAACGTCGATACGTCATCTGGAGCGCCGTTCACT AAACGCTAACCGGCTGGATCGGGGGAGTTGTGACGTGAAGCTACACTGGCATCTGC ] [-] EMBL CD070655 [ CGCGAAATGAGAACTCTGATTCATTTTTT AGGGGAAGATGAACGGGATA CATGATAC AGCGCGGC GCTGGCGCCTCCCTAAACGTCGATACGTCATCTGGAGCGCCGTTCACT AAACGCTAACCGGCTGGATCGGGGGAGTTGTGACGTGAAGCTACTCTGGCATCTGC ] [-] EMBL CD070709 [ ATGAGAACTCTGATTCATTTTTT AGGGGAAGATGAACGGGATA CATGATAC AGCGCGGC GCTGGCGCCTCCCTAAACGTCGATACGTCATCTGGAGCGCCGTTCACT AAACGCTAACCGGCTGGATCGGGGGAGTTGTGACGTGAAGCTACTCTGGCATCTGC ] [-] EMBL CD070630 [ GAACTCTGATTCATTTTTT AGGGGAAGATGAACGGGATACCATGATACAAACGCGGC GCTGGCGCCTCCCTAAACGTCGATACGTCATCTGGAGCGCCGTTCACT AAACGCTAACCGGCTGGATCGGGGGAGTTGTGACGTGAAGCTACTCTGGCATCTGC ] [-] EMBL CD070589 [ AGATGAACGGGATA CATGATAC AGCGCGGCGGCTGGCGCCTCCCTAAACGTCGATACGTCATCTGGAGCGCCGTTCACT GAACGCTAACCGGCCGGATCGGGAGAGTTGTGACGCGACGCTGCTCTGGCATCTGC ] [-] EMBL CD070593 [ GAACGGGATA CATGATAC AGCGCGGC GCTGGCGCCTCCCTAAACGTCGATACGTCATCTGGAGCGCCGTTCACT AAACGCTAACCGGCTGGATCGGGGGAGTTGTGACGTGAAGCTACTCTGGCATCTGC ] [-] EMBL CD070720 [ GC GCTGGCGCCTCCCTAAACGTCGATACGTCATCTGGAGCGCCGTTCACT AAACGCTAACCGGCTGGATCGGGGGAGTTGTGACGTGAAGCTACTCTGGCATCTGC ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||