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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10701#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 2031 fasta sequence
[AGTTTACTGA-GGTTCTACACCTTTACT-AT-TGCTGCTGATGGTGGTCATCTGACTGTTTTGTCACTGCTGTTAAATGCGGGAGCGTTAGTCAACACTATTAATTGCCATGGTGAATGTGCTCTTACCCGTGCTACCCGTCGTGGATGGGTTCACTGTGCACGATTTCTCTTAAGCCATGGAGCTAATCCGAATCCGATGCCATCTGATGGACATACTTTTGTGGTATCGCCATTACATTTAGCTCGCCAAATGCATCAAACAGTTATAGAACAAGATATTTTAAAAAGAACAGTTGAGATTGATAAAGCTGTTGCTGAAATAGTATCAACGACTCTACCAAATCATCTGACTTTGATAGAACCAGGACATTTACCAGAGACAATGTCTTTAAGTTTGTTTCCTGTTCAAATCTTCTCTTCAGAAGAGCTTAGTCGCTTTGTTTTGTACTTTAAAACACCTCCTGGGTATGGCTCACGCAGTTTACAAACGGGAAATAAAGAATCTTCCAGTGGATCGACACCGTCTGACGAGCTGATATTTGTATATGTGATTCGAGCGCAGTTATCCGACAATCATGTTTCTTGC-TGGCTCACTGGACCTCCCATGGAATCACTATCATTGAGCTTTAATGGGACAAAAAAACACTGTACCGTGATACCCTTGTCACCTGAGTATTCTGGTATCTGCGTATATTCAGTATCTACAGTAATTAGGAGTGGTGGACTCAATACTCTCTGCCTAGAGCTACGTACCCAAGACCAATCAATTGGTGAAACAACTCAGGGTGCATCATATGATTCAGTTGTTCTTGTTGGAGCTTATCGTATTCGTCTGGATGTAACCTCTTTGATAATGGCCTCAGTGAATCCAGTGTCCTCAACAGGAACCACTAAAGCAAGCGTTTACATCCCCAGATCAGCCATATAATATTAGTAGCTATGAAAAATATGGATGTTTTCAACCACTGTATTCTGTTTCATCCTATTAAACATAGAGGATTACAAAGATTTCAAAATGTACTTGACAAAAAATATCACAAGATAGAAACGACAGTTTTTGTACACAAATTATTTCTTACAAAAGTTTGTCTGTTTTCATATTTGCAGGAATGATATTCATATTTAATTCAGAAAGAAAATACTGTACTGAAAGGTGGTTATAGTTTCTAGATCATGAGATCATTATTTGTGATGTGTTCCAGTAGGTTCTCGAGAAGAAGAGGCTTGTTGTTGTGGATTTGTCTTGTTCTGACGTTGTCGAACACACATAACCAGCTGTTCAGCTGTTACAGGATACATGATACTTTCGATAATGGCGACTCCTGACTTGTGATAGTTCGGCTCTGTCTTGTCAGTGCGCACACGTAAAACTTTCCAACCGACACCAGGAACGCATACACATTCTACAATTTTTCCGTCTAAAACTTTATCACGTGAACTAACATGTGCCAGCTTGGCAGATGGCACCGTAAGACCACCAAGAAAGAGAAGTCCAACGTAACCCGGAATTTCACCAACTTTTCGTTGATATTCCACTTTACATCTAGTCAATTGTGTTCATACTTGGAGGTTTCCATTTTAACGTTTGTGGGCAGGTTCCAAGAACATAAAAATCTTCAGGACCACAAGGCTGAAATACAAGGCCATCTGTTGAGTGGTCCAAACTTTGCAAGAACGCAGGTTTGAGTAGCTCTTCAGTATCTTGCAGTGCGCGAAATGCTTTTCGCCTGACCGAAAAAGATTGAGTACTAAAGTCAACTAGTCCCAAGTGACCACCGGTATTCCTGGGCCATATAACTTGTTTGTCAATTGTAGAATAACGTTCAAAAAATGCAGACCGACCAATGGGTTTATTGTTTAAAGTAATTATATCATAGATTAAGAATCTAGGTGTTCCAGATACTTCTGATGTAGATATGTTAGGCGGTTTGGAATGGTCATGACAAAGTACAAGTTCACCATCCAAAAGCGTATTAAATAAGTGACCATCAGGATCATTTAGGAAGTCTGGACGACCAGAATGATCCCATAT]
[+] EMBL CD069929 [AGTTTACTGA GGTTCTACACCTTTACTCAT TGCTGCTGATGGTGGTCATCTGACTGTTTTGTCACTGCTGTTAAATGCGGGAGCGTTAGTCAACACTATTAATTGCCATGGTGAATGTGCTCTTACCCGTGCTACCCGTCGTGGATGGGTTCACTGTGCACGATTTCTCTTAAGCCATGGAGCTAATCCGAATCCGATGCCATCTGATGGACATACTTTTGTGGTATCGCCATTACATTTAGCTCGCCAAATGCATCAAACAGTTATAGAACAAGATATTTTAAAAAGAACAGTTGAGATTGATAAAGCTGTTGCTGAAATAGTATCAACGACTCTACCAAATCATCTGACTTTGATAGAACCAGGACATTTACCAGAGACAATGTCTTTAAGTTTGTTTCCTGTTCAAATCTTCTCTTCAGAAGAGCTTAGTCGCTTTGTTTTGTACTTTAAAAC ]
[+] EMBL CD080386 [ ACTGATGGTTCTACACCTTTAAT ATATGCTGCTGATGGTGGTCATCTGACTGTTTTGTCACTGCTGTTAAATGCGGGAGCGTTAGTCAACACTATTAATTGCCATGGTGAATGTGCTCTTACCCGTGCTACCCGTCGTGGATGGGTTCACTGTGCACGATTTCTCTTAAGCCATGGAGCTAATCCGAATCCGATGCCATCTGATGGACATACTTTTGTGGTATCGCCATTACATTTAGCTCGCCAAATGCATCAAACAGTTATAGAACAAGATATTTTAAAAAGAACAGTTGAGATTGATAAAGCTGTTGCTGAAATAGTATCAACGACTCTACCAAATCATCTGACTTTGATAGAACCAGGACATTTACCAGAGACAATGTCTTTAAGTTTGTTTCCTGTTCAAATCTTCTCTTCAGAAGAGCTTAGTCGCTTTGTTTTGTACTTTAAAACACCTCCTGGGTATGGCTCACGCAGTTTACAAACGGGAAATAAAGAATCTTCCAGTGGATCGACACCGTCTGACGAGCTGATATTTGTATATGTGATTCGAGCGCAGTTATCCGACAATCATGTTTCTTGC TGGCTCACTGGACCTCCCATGGAATCACTATCATTGAGCTNTAATGGGAC ANAAAACACTGTACCGTGATACCCTTGTCACCTGAGTATTCTGGTATCTGCGTATATTCAGTATCTACA ]
[+] EMBL BG931868 [ GTCATCTGACTGTTTTGTCACTGCTGTTAAATGCGGGAGCGTTAGTCAGCACTATTAATTGCCATGGTGAATGTGCTCTTACCCGTGCTACCCGTCGTGGATGGGTTCACTGTGCACGATTTCTCTTAAGCCATGGAGCTAATCCGAATCCGATGCCATCTGATGGACATA ]
[-] EMBL CD127702 [ TTGTCACTGCTGTTAAATGCGGGAGCGTTAGTCAACACTATTAATTGCCATGGTGAATGTGCTCTTACCCGTGCTACCCGTCGTGGATGGGTTCACTGTGCACGATTTCTCTTAAGCCATGGAGCTAATCCGAATCCGATGCCATCTGATGGACATACTTTTGTGGTATCGCCATTACATTTAGCTCGCCAAATGCATCAAACAGTTATAGGACAAGATATTTTAAAAAGAACAGTTGAGATTGATAAAGCTGTTGCTGAAATAGTATCAATGACTCTACCAAATCATCTGACTTTGATAGAACCAGGACATTTACCAGAGACAATGTCTTTAAGTTTGTTTCCTGTTCAAATCTTCTCGTCAGAAGAGCTTAGTCGCTTTGTTTAATACTTTAAAACACCTacc ]
[+] EMBL CD083519 [ GCTCTTACCCGTGCTACCCGTCGTGGATGGGTTCACTGTGCACGATTTCTCTTAAGCCATGGAGCTAATCCGAATCCGATGCCATCTGATGGACATACTTTTGTGGTATCGCCATTACATTTAGCTCGCCAAATGCATCAAACAGTTATAGAACAAGATATTTTAAAAAGAACAGTTGAGATTGATAAAGCTGTTGCTGAAATAGTATCAACGACTCTACCAAATCATCTGACTTTGATAGAACCAGGACATTTACCAGAGACAATGTCTTTAAGTTTGTTTCCTGTTCAAATCTTCTCTTCAGAAGAGCTTAGTCGCTTTGTTTTGTACTTTAAAACACCTCCTGGGTATGGCTCACGCAGTTTACAAACGGGAAATAAAGAATCTTCCAGTGGATCGACACCGTCTGACGAGCTGATATTTGTATATGTGATTCGAGCGCAGTTATCCGACCATCATGTTTCTTGCTTGGCTC ]
[-] EMBL CD074481 [ TCGACACCGTCTGACGAGCTGATATTTGTATATGT ATTCGAGCGCAGTTATCCGACAATCATGTTTCTTGC TGGCTCACTGGACCTCCCATGGAATCACTATCATTGAGCTTTAATGGGACAAAAAAACACTGTACCGTGATACCCTTGTCACCTGAGTATTCTGGTATCTGCGTATATTCAGTATCTACAGTAATTAGGAGTGGTGGACTCAATACTCTCTGCCTAGAGCTACGTACCCAAGACCAATCAATTGGTGAAACAACTCAGGGTGCATCATATGATTCAGTTGTTCTTGTTGGAGCTTATCGTATTCGTCTGGATGTAACCTCTTTGATAATGGCCTCAGTGAATCCAGTGTCCTCAACAGGAACCACTAAAGCAAGCGTTTACATCCCCAGATCAGCCATATAATATTAGTAGCTATGAAAAATATGGATGTTTTCAACCACTGTATTCTGTTTCATCCTATTAAACATAGAGGATTACAAAGATTTCAAAATGTACTTGACAAAAAATATCACAAGATAGAAACGACAGTTTTTGTACACAAATTATTTCTTACAAAAGTTTGTCTGTTTTCATATTTGCAGGAATGATATTCATATTTAATTCAGAAAGAAAATACTGTACTGAA ]
[-] EMBL CD074301 [ GACGAGCTGATATTTGTATATGTGATTCGAGCGCAGTTATCCGACAATCATGTTTCTTGC TGGCTCACTGGACCTCCCATGGAATCACTATCATTGAGCTTTAATGGGACAAAAAAACACTGTACCGTGATACCCTTGTCACCTGAGTATTCTGGTATCTGCGTATATTCAGTATCTACAGTAATTAGGAGTGGTGGACTCAATACTCTCTGCCTAGAGCTACGTACCCAAGACCAATCAATTGGTGAAACAACTCAGGGTGCATCATATGATTCAGTTGTTCTTGTTGGAGCTTATCGTATTCGTCTGGATGTAACCTCTTTGATAATGGCCTCAGTGAATCCAGTGTCCTCAACAGGAACCACTAAAGCAAGCGTTTACATCCCCAGATCAGCCATATAATATTAGTAGCTATGAAAAATATGGATGTTTTCAACCACTGTATTCTGTTTCATCCTATTAAACATAGAGGATTACAAAGATTTCAAAATGTACTTGACAAAAAATATCACAAGATAGAAACGACAGTTTTTGTACACAAATTATTTCTTACAAAAGTTTGTCTGTTTTCATATTTGCAGGAATGATATTCATATTTAATTCAGAAAGAAAATACTGTACTGAA ]
[+] EMBL CD187008 [ TGGAATCACTATCATTGAGCTTTAATGGGACAAAAAAACACTGTACCGTGATACCCTTGTCACCTGAGTATTCTGGTATCTGCGTATATTCAGTATCTACAGTAATTAGGAGTGGTGGACTCAATACTCTCTGCCTAGAGCTACGTACCCAAGACCAATCAATTGGTGAAACAACTCAGGGTGCATCATATGATTCAGTTGTTCTTGTTGGAGCTTATCGTATTCGTCTGGATGTAACCTCTTTGATAATGGCC ]
[-] EMBL AW017059 [ TATTCAGTATCTACAGTAATTAGGAGTGGTGGACTCAATACTCTCTGCCTAGAGCTACGTACCCAAGACCAATCAATTGGTGAAACAACTCAGGGTGCATCATATGATTCAGTTGTTCTTGTTGGAGCTTATCGTATTCGTCTGGATGTAACCTCTTTGATAATGGCCTCAGTGAATCCAGTGTCCTCAACAGGAACCACTAAAGCAAGCGTTTACATCCCCAGATCAGCCATATAATATTAGTAGCTATGAAAAATATGGATGTTTTCAACCACTGTATTCTGTTTCATCCTATTAAACATAGAGGATTACAAAGATTTCAAAATGTACTTGACAAAAAATATCACAAGATAGAAACGACAGTTTTTGTACACAAATTATTTCTTACAAAAGTTTGTCTGTTTTCATATTTGCAGGAATGATATTCATATTTAATTCAGAAAGAAAATACTGTACTGAA ]
[+] EMBL CD073297 [ AACCACTGTATTCTGTTTCATCCTATTAAACATAGAGGATTACAAAGATTTCAAAATGTACTTGACAAAAAATATCACAAGATAGAAACGACAGTTTTTGTACACAAATTATTTCTTACAAAAGTTTGTCTGTTTTCATATTTGCAGGAATGATATTCATATTTAATTCAGAAAGAAAATACTGTAAAGTTAGGTGGTTATAGTTTCTAGATCATGAGATCATTATTTGTGATGTGTTCCAGTAGGTTCTCGAGAAGAAGAGGCTTGTTGTTGTGGATTTGTCTTGTTCTGACGTTGTCGAACACACATAACCAGCTGTTCAGCTGTTACAGGATACATGATACTTTCGATAATGGCGACTCCTGACTTGTGATAGTTCGGCTCTGTCTTGTCAGTGCGCACACGTAAAACTTTCCAACCGACACCAGGAACGCATACACATTCTACAATTTTTCCGTCTAAAACTTTATCACGTGAACTAACATGTGCCAGCTTGGCAGATGGCACCGTAAGACCACCAAGAAAGAGAAGTCCAACGTAACCCGGAATTTCACCAACTTTTCGTTGATATTCCACTTTACATCTAGTCAATTGTGTTCAT ]
[-] EMBL CD078837 [ TTCAGCTGTTACAGGATACATGATACTTTCGATAATGGCGACTCCTGACTTGTGATAGTTCGGCTCTGTCTTGTCAGTGCGCACACGTAAAACTTTCCAACCGACACCAGGAACGCATACACATTCTACAATTTTTCCGTCTAAAACTTTATCACGTGAACTAACATGTGCCAGCTTGGCAGATGGCACCGTAAGACCACCAAGAAAGAGAAGTCCAACGTAACCCGGAATTTCACCAACTTTTCGTTGATATTCCACTTTACATCTAGTCAATTGTGTTCATACTTGGAGGTTTCCATTTTAACGTTTGTGGGCAGGTTCCAAGAACATAAAAATCTTCAGGACCACAAGGCTGAAATACAAGGCCATCTGTTGAGTGGTCCAAACTTTGCAAGAACGCAGGTTTGAGTAGCTCTTCAGTATCTTGCAGTGCGCGAAATGCTTTTCGCCTGACCGAAAAAGATTGAGTACTAAAGTCAACTAGTCCCAAGTGACCACCGGTATTCCTGGGCCATATAACTTGTTTGTCAGTTGTAGAATAACGTTCAAAAAATGCAGACCGACCAATGGGTTTATTGTTTAAAGTAATTATATCATAGATTAAGAATCTAGGTGTTCC ]
[-] EMBL CD197290 [ AGAACATAAAAATCTTCAGGACCACAAGGCTGAAATACAAGGCCATCTGTTGAGTGGTCCAAACTTTGCAAGAACGCAGGTTTGAGTAGCTCTTCAGTATCTTGCAGTGCGCGAAATGCTTTTCGCCTGACCGAAAAAGATTGAGTACTAAAGTCAACTAGTCCCAAGTGACCACCGGTATTCCTGGGCCATATAACTTGTTTGTCAATTGTAGAATAACGTTCAAAAAATGCAGACCGACCAATGGGTTTATTGTTTAAAGTAATTATATCATAGATTAAGAATCTAGGTGTTCCAGATACTTCTGATGTAGATATGTTAGGCGGTTTGGAATGGTCATGACAAAGTACAAGTTCACCATCCAAAAGCGTATTAAATAAGTGACCATCAGGATCATTTAGGAAGTCTGGACGACCAGAATGATCCCATAT]
[-] EMBL CD171542 [ CCGANAAAGATTGAGTACTANAGTCAACTAGTCCCAAGTGACCACCGGTATTCCTGGGCCATATAACTTGTTTGTCAATTGTAGAATAACGTTCAAAAAATGCAGACCGACCAATGGGTTTATTGTTTAAAGTAATTATATCATAGATTAAGAATCTAGGTGTTCCAGATACTTCTGATGTAGATATGTTAGGCGGTTTGGAATGGTCATGACAAAGTACAAGTTCGCCATCCAAAAGCGTATTAAATAAGTGACCATCAGGATCATTTAGGAAGTCTGGACGAC ]
consensusID : consensus_10701#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 512 fasta sequence
[TGAAATTTATATTCCATTTCACGCTGATCATACTTGCTTGTGTTCGCATCATCATCACTTTCGTCATCGTCATCATCATTGTCGAATTCATTCCAAATGGTTGATCTCATTGAAAACGTTTTAGGCGTCTCCATAATAGGTAAACTTGATGGTGGTATACGCACTAAGGGATAACATGATATATGAGATCTGGGCACAAGGCCTCGTTGACCTTCAGAATTTTCAGCTAACATCCATTCTATCTCACCAGGTGGCTCACGATCAACTATAGTGAGAAGTTCATTTGGTTTAAGCGGCAATTCATCTGGTTCTAAATGAGCATCTATGGAACCTGGTCCAGCTGCTTCTATTCCTCTTTACATCTGAAGTCAATTGTGTTCATACTTGGAGGTTTCCATTTTAGCGTTTGTGGGCAGGTTCCAAGAACATAAAAATCTTCAGGACCACAAGGCTGAAATACAAGGCCATCTGTTGAGTGGTCCAAACTTTGCAAGAACGCAGGTTTGAGTAGC]
[+] EMBL CD181378 [TGAAATTTATATTCCATTTCACGCTGATCATACTTGCTTGTGTTCGCATCATCATCACTTTCGTCATCGTCATCATCATTGTCGAATTCATTCCAAATGGTTGATCTCATTGAAAACGTTTTAGGCGTCTCCATAATAGGTAAAC ]
[-] EMBL CD158909 [ TGATCTCATTGAAAACGTTTTAGGCGTCTCCATAATAGGTAAACTTGATGGTGGTATACGCACTAAGGGATAACATGATATATGAGATCTGGGCACAAGGCCTCGTTGACCTTCAGAATTTTCAGCTAACATCCATTCTATCTCACCAGGTGGCTCACGATCAACTATAGTGAGAAGTTCATTTGGTTTAAGCGGCAATTCATCTGGTTCTAAATGAGCATCTATGGAACCTGGTCCAGCTGCTTCTATTCCTCTTTACATCTGAAGTCAATTGTGTTCATACTTGGAGGTTTCCATTTTAGCGTTTGTGGGCAGGTTCCAAGAACATAAAAATCTTCAGGACCACAAGGCTGAAATACAAGGCCATCTGTTGAGTGGTCCAAACTTTGCAAGAACGCAGGTTTGAGTAGC]
consensusID : consensus_10701#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 490 fasta sequence
[TGGAATCACTATCATTGAGCTTTATTGNGACAAAAAAACACTGTACCGTGATACCCTTGTCACTTGAGTATCTTGGTATNTGCGTATATTCAGTATCTACAGTAATTAGGAGTGTTGGACTCAATACTCTCTGCCTAGAGCTACGTACCCAAGACCAATCAATTGGTGAAACAACTCAGGGTGCATCATATGATTCAGTTGTTCTTGTTGGAGCTTATCGTATTCGTCTGGATGTAACCTCTTTGATAATGGCCTCAGTGAATCCAGTGTCCTCAACAGGAACCACTAAAGCAAGCGTTTACATCCCCAGATCAGCCATATAATATTAGTAGCTATGAAAAATATGGATGTTTTCAACCACTGTATTCTGTTTCATCCTATTAAACATAGAGGATTACAAAGATTTCAAAATGTACTTGACAAAAAATATCACAAGATAGAAACGACAGTTTTTGTACACAAATTATTTCTTACAAAAAAAAAAAAAAAA]
[-] EMBL AI395770 [TGGAATCACTATCATTGAGCTTTATTGNGACAAAAAAACACTGTACCGTGATACCCTTGTCACTTGAGTATCTTGGTATNTGCGTATATTCAGTATCTACAGTAATTAGGAGTGTTGGACTCAATACTCTCTGCCTAGAGCTACGTACCCAAGACCAATCAATTGGTGAAACAACTCAGGGTGCATCATATGATTCAGTTGTTCTTGTTGGAGCTTATCGTATTCGTCTGGATGTAACCTCTTTGATAATGGCCTCAGTGAATCCAGTGTCCTCAACAGGAACCACTAAAGCAAGCGTTTACATCCCCAGATCAGCCATATAATATTAGTAGCTATGAAAAATATGGATGTTTTCAACCACTGTATTCTGTTTCATCCTATTAAACATAGAGGATTACAAAGATTTCAAAATGTACTTGACAAAAAATATCACAAGATAGAAACGACAGTTTTTGTACACAAATTATTTCTTACAAAAAAAAAAAAAAAA]
consensusID : consensus_10701#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 479 fasta sequence
[TTTTTTTTTTTTTTTTTACAAAGATTTCAAAATGTACTTGACAAAAAATATCACAAGATAGAAACGACAGTTTTTGTACACAAATTATTTCTTACAAAAGTTTGTCTGTTTTCATATTTGCAGGAATGATATTCATATTTAATTCAGAAAGAAAATACTGTACTGAACAGACTGATAATCATGCAATTTTTACAAACAAGTTAGGTGGTTATAGTTTCTAAATCATGAGATCATTATTTGTGATGTGTTCCAGTAGGTTCTCGAGAAAAAAAGGCTTGTTGTTGTGGATTTGTCTTGTTCTGACGTTGTCGAACACACATAACCAGCTGTTCAGCTGTTACAGGATACATGATACTTTCCATAATGGCGACTCCTGACTTGTGAAAGTTCGGCTCTGTCTTGTCAGTGCGCACACGTAAAATTTCCAACCGACACCAGGAAGCATACAATTCTACATTTTTCCGTCTAAAGCTTTACAA]
[+] EMBL AI395759 [TTTTTTTTTTTTTTTTTACAAAGATTTCAAAATGTACTTGACAAAAAATATCACAAGATAGAAACGACAGTTTTTGTACACAAATTATTTCTTACAAAAGTTTGTCTGTTTTCATATTTGCAGGAATGATATTCATATTTAATTCAGAAAGAAAATACTGTACTGAACAGACTGATAATCATGCAATTTTTACAAACAAGTTAGGTGGTTATAGTTTCTAAATCATGAGATCATTATTTGTGATGTGTTCCAGTAGGTTCTCGAGAAAAAAAGGCTTGTTGTTGTGGATTTGTCTTGTTCTGACGTTGTCGAACACACATAACCAGCTGTTCAGCTGTTACAGGATACATGATACTTTCCATAATGGCGACTCCTGACTTGTGAAAGTTCGGCTCTGTCTTGTCAGTGCGCACACGTAAAATTTCCAACCGACACCAGGAAGCATACAATTCTACATTTTTCCGTCTAAAGCTTTACAA]
[+] EMBL AI394862 [TTTTTTTTTTTTTTTTTACAAAGATTTCAAAATGTACTTGACAAAAAATATCACAAGATAGAAACGACAGTTTTTGTACACAAATTATTTCTTACAAAAGTTTGTCTGTTTTCATATTTGCAGGAATGATATTCATATTTAATTCAGAAAGAAAATACTGTACTGAACAGACTGATAATCATGCAATTCGTACAAACAAGTTAGGTGGTTATAGTTTCTAGATCATGAGATCATTATTTGTGATGTGTTCCAGTAGGTTCTCGAGAAGAAGAGGCTTGTTGTTGTGGATTTTGCTTGTTCTGACGTTGTCNAACACACATAACCAGCTGTTCAGCTGTTACAGGATACATGATACTCTCCATAATG ]
consensusID : consensus_10701#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 457 fasta sequence
[TAAAACACCTCCTGGGTATGGCTCACGCAGTTTACAAACGGGAAATAAAGAATCTTCCAGTGGATCGACACCGTCTGACGAGCTGATATTTGTATATGTGATTCGAGCGCAGTTATCCGTACGTTTGTATGTAATATCATTAAATGTTTTACTTTTGCATTCAAAGTAAGTAATAAGCGATCGTTTTATTACAAAGGTGTTTTCAAAATCCATTTATGGATGCGTGTCACGCCTCTATTGTCTACCACTAATATAGTGGTTTCTCAAATTCAAATAGTCATTTTTGTAACCTTGAACTATTAAGGTTGCAGATAACTTTATTAGGACTAGTAGTGTCAGTGAAATAATTAAATTTTCTCGTGTGTGGTGTCACCACTACTTACACACACCAGCGTTTAATAATACACCGAAACGGACAAGTCGTCTAAAAAAACAGTGCTAGTAGAGCAGCCACTCA]
[-] EMBL CD202407 [TAAAACACCTCCTGGGTATGGCTCACGCAGTTTACAAACGGGAAATAAAGAATCTTCCAGTGGATCGACACCGTCTGACGAGCTGATATTTGTATATGTGATTCGAGCGCAGTTATCCGTACGTTTGTATGTAATATCATTAAATGTTTTACTTTTGCATTCAAAGTAAGTAATAAGCGATCGTTTTATTACAAAGGTGTTTTCAAAATCCATTTATGGATGCGTGTCACGCCTCTATTGTCTACCACTAATATAGTGGTTTCTCAAATTCAAATAGTCATTTTTGTAACCTTGAACTATTAAGGTTGCAGATAACTTTATTAGGACTAGTAGTGTCAGTGAAATAATTAAATTTTCTCGTGTGTGGTGTCACCACTACTTACACACACCAGCGTTTAATAATACACCGAAACGGACAAGTCGTCTAAAAAAACAGTGCTAGTAGAGCAGCCACTCA]
consensusID : consensus_10701#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 390 fasta sequence
[CAACTCAGGGCTTCATCATATGATTCAGTTGTTCTTGTTGGGGCTTATGTATTCGTCTGGATGTACCTCTTTGATAATGGCCTCAGTGAATCCAGTGTCCTCAACAGGAACCACTAAAGCAAGCGTTTACATCCCCAGATCAGCCATATAATATTAGTAGCTATGAAAAATATGGATGTTTTCAACCACTGTATTCTGTTTCATCCTATTAAACATAGAGGATTACAAAGATTTCAAAATGTACTTGACAAAAAATATCACAAGATAGAAACGACAGTTTTTGTACACAAATTATTTCTTACAAAAGTTTGTCTGTTTTCATATTTGCAGGAATGATATTCATATTTAATTCAGAAAGAAAATACTGTACTGAAAAAAAAAAAAAAAAAA]
[-] EMBL AI394946 [CAACTCAGGGCTTCATCATATGATTCAGTTGTTCTTGTTGGGGCTTATGTATTCGTCTGGATGTACCTCTTTGATAATGGCCTCAGTGAATCCAGTGTCCTCAACAGGAACCACTAAAGCAAGCGTTTACATCCCCAGATCAGCCATATAATATTAGTAGCTATGAAAAATATGGATGTTTTCAACCACTGTATTCTGTTTCATCCTATTAAACATAGAGGATTACAAAGATTTCAAAATGTACTTGACAAAAAATATCACAAGATAGAAACGACAGTTTTTGTACACAAATTATTTCTTACAAAAGTTTGTCTGTTTTCATATTTGCAGGAATGATATTCATATTTAATTCAGAAAGAAAATACTGTACTGAAAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10701#2 ------------------------------------------------------------
consensus_10701#5 ------------------------------------------------------------
consensus_10701#0 AGTTTACTGAGGTTCTACACCTTTACTATTGCTGCTGATGGTGGTCATCTGACTGTTTTG 60
consensus_10701#3 ------------------------------------------------------------
consensus_10701#1 ------------------------------------------------------------
consensus_10701#4 ------------------------------------------------------------
consensus_10701#2 ------------------------------------------------------------
consensus_10701#5 ------------------------------------------------------------
consensus_10701#0 TCACTGCTGTTAAATGCGGGAGCGTTAGTCAACACTATTAATTGCCATGGTGAATGTGCT 120
consensus_10701#3 ------------------------------------------------------------
consensus_10701#1 ------------------------------------------------------------
consensus_10701#4 ------------------------------------------------------------
consensus_10701#2 ------------------------------------------------------------
consensus_10701#5 ------------------------------------------------------------
consensus_10701#0 CTTACCCGTGCTACCCGTCGTGGATGGGTTCACTGTGCACGATTTCTCTTAAGCCATGGA 180
consensus_10701#3 ------------------------------------------------------------
consensus_10701#1 ------------------------------------------------------------
consensus_10701#4 ------------------------------------------------------------
consensus_10701#2 ------------------------------------------------------------
consensus_10701#5 ------------------------------------------------------------
consensus_10701#0 GCTAATCCGAATCCGATGCCATCTGATGGACATACTTTTGTGGTATCGCCATTACATTTA 240
consensus_10701#3 ------------------------------------------------------------
consensus_10701#1 ------------------------------------------------------------
consensus_10701#4 ------------------------------------------------------------
consensus_10701#2 ------------------------------------------------------------
consensus_10701#5 ------------------------------------------------------------
consensus_10701#0 GCTCGCCAAATGCATCAAACAGTTATAGAACAAGATATTTTAAAAAGAACAGTTGAGATT 300
consensus_10701#3 ------------------------------------------------------------
consensus_10701#1 ------------------------------------------------------------
consensus_10701#4 ------------------------------------------------------------
consensus_10701#2 ------------------------------------------------------------
consensus_10701#5 ------------------------------------------------------------
consensus_10701#0 GATAAAGCTGTTGCTGAAATAGTATCAACGACTCTACCAAATCATCTGACTTTGATAGAA 360
consensus_10701#3 ------------------------------------------------------------
consensus_10701#1 ------------------------------------------------------------
consensus_10701#4 ------------------------------------------------------------
consensus_10701#2 ------------------------------------------------------------
consensus_10701#5 ------------------------------------------------------------
consensus_10701#0 CCAGGACATTTACCAGAGACAATGTCTTTAAGTTTGTTTCCTGTTCAAATCTTCTCTTCA 420
consensus_10701#3 ------------------------------------------------------------
consensus_10701#1 ------------------------------------------------------------
consensus_10701#4 ------------------------------------------------------------
consensus_10701#2 ------------------------------------------------------------
consensus_10701#5 ------------------------------------------------------------
consensus_10701#0 GAAGAGCTTAGTCGCTTTGTTTTGTACTTTAAAACACCTCCTGGGTATGGCTCACGCAGT 480
consensus_10701#3 ------------------------------------------------------------
consensus_10701#1 ------------------------------------------------------------
consensus_10701#4 ------------------------------------------------------------
consensus_10701#2 ------------------------------------------------------------
consensus_10701#5 ------------------------------------------------------------
consensus_10701#0 TTACAAACGGGAAATAAAGAATCTTCCAGTGGATCGACACCGTCTGACGAGCTGATATTT 540
consensus_10701#3 ------------------------------------------------------------
consensus_10701#1 ------------------------------------------------------------
consensus_10701#4 ------------------------------------------------------------
consensus_10701#2 ------------------------------------------------------------
consensus_10701#5 ------------------------------------------------------------
consensus_10701#0 GTATATGTGATTCGAGCGCAGTTATCCGACAATCATGTTTCTTGCTGGCTCACTGGACCT 600
consensus_10701#3 ------------------------------------------------------------
consensus_10701#1 ---------------------------------------------TGAAATTTATATTCC 15
consensus_10701#4 ------------------------------------------------------------
consensus_10701#2 ----TGGAATCACTATCATTGAGCTTTATTGNGACAAAAAAACACTGTACCGTGATACCC 56
consensus_10701#5 ------------------------------------------------------------
consensus_10701#0 CCCATGGAATCACTATCATTGAGCTTTAATGGGACAAAAAAACACTGTACCGTGATACCC 660
consensus_10701#3 -------------TTTTTTTTTTTTTTTTTACAAAGATTTCAAAATGTACTTGACAAAAA 47
consensus_10701#1 ATTTCACGCTGATCATACTTGCTTGTGTTCGCATCATCATCACTTTCGTCATCGTCATCA 75
consensus_10701#4 ------TAAAACACCTCCTGGGTATGGCTCACGCAGTTTACAAACGGGAAATAAAGAATC 54
consensus_10701#2 TTGTCACTTGAGTATCTTGGTATNTGCGTATATTCAGTATCTACAGTAATTAGGAGTGTT 116
consensus_10701#5 ------------------------------------------------------------
consensus_10701#0 TTGTCACCTGAGTATTCTGGTATCTGCGTATATTCAGTATCTACAGTAATTAGGAGTGGT 720
consensus_10701#3 ATATCACAAGATAGAAACGACAGTT-TTTGTACACAAATTATTTCTTACAAAAGTTTGTC 106
consensus_10701#1 TCATTGTCGAATTCATTC--CAAATGGTTGATCTCATTGAAAACGTTTTAGGCGTCTCCA 133
consensus_10701#4 TT-CCAGTGGATCGACAC--CGTCTGACGAGCTGATATTTGTATATGTGATTCGAGCGCA 111
consensus_10701#2 GGACTCAATACTCTCTGCCTAGAGCTACGTACCCAAGACC--AATCAATTGGTGAAACAA 174
consensus_10701#5 ---------------------------------------------------------CAA 3
consensus_10701#0 GGACTCAATACTCTCTGCCTAGAGCTACGTACCCAAGACC--AATCAATTGGTGAAACAA 778
consensus_10701#3 TGTTTTCATATTTGCAGGAATGATATTCATATTTAATTCAGAAAGAAAATACTGTACTGA 166
consensus_10701#1 TAA-TAGGTAAACTTGATGGTGGTATACGCACTAAGGGATAACATGATATATGAGATCTG 192
consensus_10701#4 GTTATCCGTACGTTTGTATGTAATAT---CATTAAATGTTTTACTTTTGCATTCAAAGTA 168
consensus_10701#2 CTCAGGG-TGCATCATATGATTCAGTTGTTCTTGTTGGA-GCTTATC---GTATTCGTCT 229
consensus_10701#5 CTCAGGGCTTCATCATATGATTCAGTTGTTCTTGTTGGG-GCTTAT----GTATTCGTCT 58
consensus_10701#0 CTCAGGG-TGCATCATATGATTCAGTTGTTCTTGTTGGA-GCTTATC---GTATTCGTCT 833
consensus_10701#3 ACAGACTGATAATCATGCAATTTTTACAAACAAGTTAGGTGGTTATA---GTTTCTAAAT 223
consensus_10701#1 GGCACAAGGCCTCGTTGACCTTCAGAATTTTCAGCTAAC-ATCCATT---CTATCTCACC 248
consensus_10701#4 AGTAATAAGCGATCGTTTTATTACAAAGGTGTTTTCAAA-ATCCATTTATGGATGCGTGT 227
* ** ** *
consensus_10701#2 GGATGTAACCTCTTTGATAAT--G-GCCTCAGTGAATCCAGTGTCCTCAACAGGAACCAC 286
consensus_10701#5 GGATGTA-CCTCTTTGATAAT--G-GCCTCAGTGAATCCAGTGTCCTCAACAGGAACCAC 114
consensus_10701#0 GGATGTAACCTCTTTGATAAT--G-GCCTCAGTGAATCCAGTGTCCTCAACAGGAACCAC 890
consensus_10701#3 CATGAGATCATTATTTGTGAT--GTGTTCCAGTAGGTTC--TCGAGAAAAAAAGGCTTGT 279
consensus_10701#1 AGGTGGCTCACGATCAACTAT--AGTGAGAAGTTCATTTGGTTTAAGCGGCAATTCATCT 306
consensus_10701#4 CACGCCTCTATTGTCTACCACTAATATAGTGGTTTCTCAAATTCAAATAGTCATTTTTGT 287
* * ** * *
consensus_10701#2 TAAAGCAAGCGTTTACATCCCCAGATCAGCCATATA-ATATTAGTAGCTATGAAAAATAT 345
consensus_10701#5 TAAAGCAAGCGTTTACATCCCCAGATCAGCCATATA-ATATTAGTAGCTATGAAAAATAT 173
consensus_10701#0 TAAAGCAAGCGTTTACATCCCCAGATCAGCCATATA-ATATTAGTAGCTATGAAAAATAT 949
consensus_10701#3 TGTTGTGGATTTGTCTTGTTCTGACGTTGTCGAACACACATAACCAGCTGTTCAGCTGTT 339
consensus_10701#1 GGTTCTAAATGAGCATCTATGGAACCTGGTCCAGCTGCTTCTATTCCTCTTTACATCTGA 366
consensus_10701#4 AACCTTGAACTATTAAGGTTGCAGA-TAACTTTATTAGGACTAGTAG-TGTCAGTGAAAT 345
* *
consensus_10701#2 GGATGTTTTCAACCACTGTATTCTGTTTC-ATCCTATTAAACATAGAGGATTA-CAAAGA 403
consensus_10701#5 GGATGTTTTCAACCACTGTATTCTGTTTC-ATCCTATTAAACATAGAGGATTA-CAAAGA 231
consensus_10701#0 GGATGTTTTCAACCACTGTATTCTGTTTC-ATCCTATTAAACATAGAGGATTA-CAAAGA 1007
consensus_10701#3 ACAGGATACATGATACTTTCCATAATGGC-GACTCCTGACTTGTGAAAGTTCGGCTCTGT 398
consensus_10701#1 AGTCAATTGTGTTCATACTTGGAGGTTTCCATTTTAGCGTTTGTGGGCAGGTTCCAAGAA 426
consensus_10701#4 AATTAAATTTTCTCGTGTGTGGTGTCACCACTACTTACACACACCAGCGTTTAATAAT-A 404
*
consensus_10701#2 TTTCAAAATGTACTTGACAAAAAATATCACAAGATAGAAACGACAGTTTTTGTACACAAA 463
consensus_10701#5 TTTCAAAATGTACTTGACAAAAAATATCACAAGATAGAAACGACAGTTTTTGTACACAAA 291
consensus_10701#0 TTTCAAAATGTACTTGACAAAAAATATCACAAGATAGAAACGACAGTTTTTGTACACAAA 1067
consensus_10701#3 CTTGTCAGTGCGCAC-ACGTAAAATTTC-CAACCGACACCAGGAAGCATACAATTCTACA 456
consensus_10701#1 CATAAAAATCTTCAGGACCACAAGGCTGAAATACAAGGCCATCTGTTGAGTGGTCCAAAC 486
consensus_10701#4 CACCGAAACGGACAAGTCGTCTAAAAAAACAGTGCTAGTAGAGCAGCCACTCA------- 457
* * * * *
consensus_10701#2 TTATTTCTTACAAAAAAAAAAAAAAAA--------------------------------- 490
consensus_10701#5 TTATTTCTTACAAAAGTTTGTCTGTTTTCATATTTGCAGGAATGATATTCATATTTAATT 351
consensus_10701#0 TTATTTCTTACAAAAGTTTGTCTGTTTTCATATTTGCAGGAATGATATTCATATTTAATT 1127
consensus_10701#3 TTTTTCCGTCTAAAGCTTTACAA------------------------------------- 479
consensus_10701#1 TTTGCAAGAACGCAGGTTTGAGTAGC---------------------------------- 512
consensus_10701#4 ------------------------------------------------------------
consensus_10701#2 ------------------------------------------------------------
consensus_10701#5 CAGAAAGAAAATACTGTACTGAAAAAAAAAAAAAAAAAA--------------------- 390
consensus_10701#0 CAGAAAGAAAATACTGTACTGAAAGGTGGTTATAGTTTCTAGATCATGAGATCATTATTT 1187
consensus_10701#3 ------------------------------------------------------------
consensus_10701#1 ------------------------------------------------------------
consensus_10701#4 ------------------------------------------------------------
consensus_10701#2 ------------------------------------------------------------
consensus_10701#5 ------------------------------------------------------------
consensus_10701#0 GTGATGTGTTCCAGTAGGTTCTCGAGAAGAAGAGGCTTGTTGTTGTGGATTTGTCTTGTT 1247
consensus_10701#3 ------------------------------------------------------------
consensus_10701#1 ------------------------------------------------------------
consensus_10701#4 ------------------------------------------------------------
consensus_10701#2 ------------------------------------------------------------
consensus_10701#5 ------------------------------------------------------------
consensus_10701#0 CTGACGTTGTCGAACACACATAACCAGCTGTTCAGCTGTTACAGGATACATGATACTTTC 1307
consensus_10701#3 ------------------------------------------------------------
consensus_10701#1 ------------------------------------------------------------
consensus_10701#4 ------------------------------------------------------------
consensus_10701#2 ------------------------------------------------------------
consensus_10701#5 ------------------------------------------------------------
consensus_10701#0 GATAATGGCGACTCCTGACTTGTGATAGTTCGGCTCTGTCTTGTCAGTGCGCACACGTAA 1367
consensus_10701#3 ------------------------------------------------------------
consensus_10701#1 ------------------------------------------------------------
consensus_10701#4 ------------------------------------------------------------
consensus_10701#2 ------------------------------------------------------------
consensus_10701#5 ------------------------------------------------------------
consensus_10701#0 AACTTTCCAACCGACACCAGGAACGCATACACATTCTACAATTTTTCCGTCTAAAACTTT 1427
consensus_10701#3 ------------------------------------------------------------
consensus_10701#1 ------------------------------------------------------------
consensus_10701#4 ------------------------------------------------------------
consensus_10701#2 ------------------------------------------------------------
consensus_10701#5 ------------------------------------------------------------
consensus_10701#0 ATCACGTGAACTAACATGTGCCAGCTTGGCAGATGGCACCGTAAGACCACCAAGAAAGAG 1487
consensus_10701#3 ------------------------------------------------------------
consensus_10701#1 ------------------------------------------------------------
consensus_10701#4 ------------------------------------------------------------
consensus_10701#2 ------------------------------------------------------------
consensus_10701#5 ------------------------------------------------------------
consensus_10701#0 AAGTCCAACGTAACCCGGAATTTCACCAACTTTTCGTTGATATTCCACTTTACATCTAGT 1547
consensus_10701#3 ------------------------------------------------------------
consensus_10701#1 ------------------------------------------------------------
consensus_10701#4 ------------------------------------------------------------
consensus_10701#2 ------------------------------------------------------------
consensus_10701#5 ------------------------------------------------------------
consensus_10701#0 CAATTGTGTTCATACTTGGAGGTTTCCATTTTAACGTTTGTGGGCAGGTTCCAAGAACAT 1607
consensus_10701#3 ------------------------------------------------------------
consensus_10701#1 ------------------------------------------------------------
consensus_10701#4 ------------------------------------------------------------
consensus_10701#2 ------------------------------------------------------------
consensus_10701#5 ------------------------------------------------------------
consensus_10701#0 AAAAATCTTCAGGACCACAAGGCTGAAATACAAGGCCATCTGTTGAGTGGTCCAAACTTT 1667
consensus_10701#3 ------------------------------------------------------------
consensus_10701#1 ------------------------------------------------------------
consensus_10701#4 ------------------------------------------------------------
consensus_10701#2 ------------------------------------------------------------
consensus_10701#5 ------------------------------------------------------------
consensus_10701#0 GCAAGAACGCAGGTTTGAGTAGCTCTTCAGTATCTTGCAGTGCGCGAAATGCTTTTCGCC 1727
consensus_10701#3 ------------------------------------------------------------
consensus_10701#1 ------------------------------------------------------------
consensus_10701#4 ------------------------------------------------------------
consensus_10701#2 ------------------------------------------------------------
consensus_10701#5 ------------------------------------------------------------
consensus_10701#0 TGACCGAAAAAGATTGAGTACTAAAGTCAACTAGTCCCAAGTGACCACCGGTATTCCTGG 1787
consensus_10701#3 ------------------------------------------------------------
consensus_10701#1 ------------------------------------------------------------
consensus_10701#4 ------------------------------------------------------------
consensus_10701#2 ------------------------------------------------------------
consensus_10701#5 ------------------------------------------------------------
consensus_10701#0 GCCATATAACTTGTTTGTCAATTGTAGAATAACGTTCAAAAAATGCAGACCGACCAATGG 1847
consensus_10701#3 ------------------------------------------------------------
consensus_10701#1 ------------------------------------------------------------
consensus_10701#4 ------------------------------------------------------------
consensus_10701#2 ------------------------------------------------------------
consensus_10701#5 ------------------------------------------------------------
consensus_10701#0 GTTTATTGTTTAAAGTAATTATATCATAGATTAAGAATCTAGGTGTTCCAGATACTTCTG 1907
consensus_10701#3 ------------------------------------------------------------
consensus_10701#1 ------------------------------------------------------------
consensus_10701#4 ------------------------------------------------------------
consensus_10701#2 ------------------------------------------------------------
consensus_10701#5 ------------------------------------------------------------
consensus_10701#0 ATGTAGATATGTTAGGCGGTTTGGAATGGTCATGACAAAGTACAAGTTCACCATCCAAAA 1967
consensus_10701#3 ------------------------------------------------------------
consensus_10701#1 ------------------------------------------------------------
consensus_10701#4 ------------------------------------------------------------
consensus_10701#2 ------------------------------------------------------------
consensus_10701#5 ------------------------------------------------------------
consensus_10701#0 GCGTATTAAATAAGTGACCATCAGGATCATTTAGGAAGTCTGGACGACCAGAATGATCCC 2027
consensus_10701#3 ------------------------------------------------------------
consensus_10701#1 ------------------------------------------------------------
consensus_10701#4 ------------------------------------------------------------
consensus_10701#2 ----
consensus_10701#5 ----
consensus_10701#0 ATAT 2031
consensus_10701#3 ----
consensus_10701#1 ----
consensus_10701#4 ----
|
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||