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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10702#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 1282 fasta sequence
[GGTGGATACCCANCGTAGTTTGGATGATGGTGGCGACTTAACTCATCAGCTGCATAAAAATTACAAGGAATTACTGACTGGTATATGTGGAATAGTTGAGGAAAGTGTGACAGGTGTTCATCGTCTTTATCAGTACGTGAAATCTGGCACATTGGGAGTGCCAGCTATGAATGTTAGCGACAGTATAACCAAATCAAAATTTGATAATTTTTATTTGTGCAAAGAATCTATTGTTGATTCCCTTAAGCGAACTACAGATATGATGATCAGTGGTAAGACCGTATTAGTATGTGGTTATGGTGAAGTTGGGAAAGGTGTTTGCCAAGCGTTAAGAGGATTGGGAGCTTTCGTTTGTATTTCGGAAATAGATCCGATTTGTGCACTTCAAGCCTGCATGGATGGTTATCGTGTTGTAAAAATTGATGAAGTTATACGTTCAGTGGATATTGTGGTTACTTGCACTGGGAATAAAGGTGTCATTACTCGGGCTCATATGGATCAAATGAAAAGTGGTTGTGTTGTATGCAATATGGGTCACTCTAACACCGAAATCGATGTTCGATCTCTTCAAACACCTGATTTAACATGGGAGCGTGTTCGATCACAAGTGGATCATGTTATTTGGATGGATGGTAAACGTATTGTTCTTATAGCTGAGGGTCGTTTGGCGAATTTAAGTTGTTCAACTGTTCCATCTATTGTTGTCTCTGTTAGCGCCAGTACTCAAATATTAGCTTTGATTG-AATTATACAATGCTCCTGCTGGTCGTTATAAAAATGATGTGTATTTATTACCGAAAAAAATGGATGAATATGTGGCAACATTGCATCTTCCATTATTCAATGGTCGAATAACTGAACTCACTGATGAACAAGCTCGATATTTAGGTGTAAATAAAACAGGACCATTTAAACCGAGTAATTACAAATACTAAACTTGTTCTCATTCTTCGTTTCTGCTCATGCACTGATTGCTGTTACATTTATTGGGAAATGTCTTCCTGTTTAACATGTATACTTTGCATCGATTTGGTTTTCGTAAAAAGTATGGTAGAATATTACATCTAATTTACTTTAAATAAATATG-TTGAAGTATG-AATTTCTCATCCT-CTTACTCTGTTTATTCTC-ATAAATTTCAATTACATTCCAATAACTATTGTGTAAAAGAGTTGCTTTATATTAATCTAGTATATTTTCATGTTTCACCGTTAATTTAA-CATATGTCTTTCCTTATTAATCTTGGTTGGCAGGATTTACCGTTAAAAAAA-AAACAAATTTTTGAT]
[-] EMBL CD142964 [GGTGGATACCCANCGTAGTTTGGATGATGGTGGCGACTTAACTCATCAGCTGCATAAAAATTACAAGGAATTACTGACTGGTATATGTGGAATAGTTGAGGAAAGTGTGACAGGTGTTCATCGTCTTTATCAGTACGTGAAATCTGGCACATTGGGAGTGCCAGCTATGAATGTTAGCGACAGTATAACCAAATCAAAATTTGATAATTTTTATTTGTGCAAAGAATCTATTGTTGATTCCCTTAAGCGAACTACAGATATGATGATCAGTGGTAAGACCGTATTAGTATGTGGTTATGGTGAAGTTGGGAAAGGTGTTTGCCAAGCGTTAAGAGGATTGGGAGCTTTCGTTTGTATTTCGGAAATAGATCCGATTTGTGCAC ]
[-] EMBL CD142912 [ CATCAGCTGCATAAAAATTACAAGGAATTACTGACTGGTATATGTGGAATAGTTGAGGAAAGTGTGACAGGTGTTCATCGTCTTTATCAGTACGTGAAATCTGGCACATTGGGAGTGCCAGCTATGAATGTTAGCGACAGTATAACCAAATCAAAATTTGATAATTTTTATTTGTGCAAAGAATCTATTGTTGATTCCCTTAAGCGAACTACAGATATGATGATCAGTGGTAAGACCGTATTAGTATGTGGTTATGGTGAAGTTGGGAAAGGTGTTTGCCAAGCGTTAAGAGGATTGGGAGCTTTCGTTTGTATTTCGGAAATAGATCCGATTTGTGCAC ]
[-] EMBL CD166123 [ GTATGTGGTTATGG GAAGTTGGG AAGGTAGTTGGCAAGCGTTAAGAGGA TGGGAGCTTTCGTTTG ATTTCGGAAATAGATCCGATTTGTGCACTTCAAGCCTGCATGGATGGTTATCGTGTTGTAAAAAATGATGAAGTTATACGTTCAGTGGATATTGTGGTTACTTGCACTGGGAATAAAGGTGTCATTACTCGTGCTCATATGGATCAAATGAAAAGTGGTTGTGTTGTATGCAATATGGGTCACTCTAACACCGAAATCGATGTTCGATCTCTTCAAACACCTGATTTAACATGGGAGCGTGTTCGGTCACAAGTGGATCATGTTAATTGGATGGATGGTAAACGTATTGTTCTTATAGCTGAGGGTCGTTTGGCGAATTTAAGTTGTTCAACTGTTCCATCTATTGTTGT ]
[+] EMBL CD195092 [ TGTTTGCCAAGCGTTAAGAGGATTGGGAGCTTTCGTTTGTATTTCGGAAATAGATCCGATTTGTGCACTTCAAGCCTGCATGGATGGTTATCGTGTTGTAAAAATTGATGAAGTTATACGTTCAGTGGATATTGTGGTTACTTGCACTGGGAATAAAGGTGTCATTACTCGGGCTCATATGGATCAAATGAAAAGTGGTTGTGTTGTATGCAATATGGGTCACTCTAACACCGAAATCGATGTTCGATCTCTTCAAACACCTGATTTAACATGGGAGCGTGTTCGATCACAAGTGGATCATGTTATTTGGATGGATGGTAAACGTATTGTTCTTATAGCTGAGGGTCGTTTGGCGAATTTAAGTTGTTCAACTGTTCCATCTATTGTTGTCTCTGTTAGCGCCAGTACTCAAATATTAGCTTTGATTGAAATTATAC ATGCTCCTGCTGGTCGTTAT AAAATGA ]
[+] EMBL SM536 [ AGCGTTAAGAGGATTGGGAGCTTTCGTTTGTATTTCGGAAATAGATCCGATTTGTGCACTTCAAGCCTGCATGGATGGTTATCGTGTTGTAAAAATTGATGAAGTTATACGTTCAGTGGATATTGTGGTTACTTGCACTGGGAATAAAGGTGTCATTACTCGGGCTCATATGGATCAAATGAAAAGTGGTTGTGTTGTATGCAATATGGGTCACTCTNACACCGAAATCGATGTTCGATCTCTTCAAACACCTGATTTANCATGGGAGCGTGTTCGATCACACGT ]
[+] EMBL CD081345 [ ggcacgAGGACTCATTACTCGGGCTCATATGGATCAAATGAAAAGTGGTTGTGTTGTATGCAATATGGGTCACTCTAACACTCAAATCGATGTTCGATCTCTTCAAACACCTGATTTAACATGGGAGCGTGTTCGATCACAAGTGGATCATGTTATTTGGATGGATGGTAAACGTATTGTTCTTATAGCTGAGGGTCGTTTGGCGAATTTAAGTTGTTCAACTGTTCCATCTATTGTTGTCTCTGTTAGCGCCAGTACTCAAATATTAGCTTTGATTG AATTATACAATGCTCCTGCTGGTCGTTATAAAAATGATGTGTATTTATTACCGAAAAAAATGGATGAATATGTGGCAACATTGCATCTTCCATTATTCAATGGTCGAATAACTGAACTCACTGATGAACAAGCTCGATATTTAGGTGTAAATAAAACAGGACCATTTAAACCGAGTAATTACAAATACTAAACTTGTTCTCATTCTTCGTTTCTGCTCATGCACTGATTGCTGTTACATTTATTGGGAAATGTCTTCCTGTTTAACATGTATACTTTGCATCGATTTGGTTTTCGTAAAAAGTATGGTAGAATATTACATNTAATTTACTTTAAATCAATATGTTTGAAGTATGAAATTTCTCATCCTCCTTACTCTGNTTATTCTCAATAATTTTCAATTACATTCCAATAACTATTGTGTCAAAGAGTTGCTTTATATTAATCTAGTATATTTCCATGTTTCACCGTTCATTTAACCATACGCCTCTCCTTATTAAACTTGGTTGGCAGGATTTACCGTTAAAAAAA AAACAAATTTTTGA ]
[+] EMBL AW017315 [ TCACTCTAACACCGAAATCGATGTTCGATCTCTTCAAACACCTGATTTAACATGGGAGCGTGTTCGATCACAAGTGGATCATGTTATTTGGATGGATGGTAAACGTATTGTTCTTATAGCTGAGGGTCGTTTGGCGAATTTAAGCTGTTCAACTGTTCCATCTATTGTTGTCTCTGTTAGCGCCAGTACTCAAATATTAGCTTTGATTG AATTATACAATGCTCCTGCTGGTCGTTATAAAAATGATGTGTATTTATTACCGAAAAAAATGGATGAATATGTGGCAACATTGCATCTTCCATTATTCAATGGTCGAATAACTGAACTCACTGATGAACAAGCTCGATATTTAGGTGTAAATAAAACAGGACCATTTAAACCGAGTAATTACAAATACTAAACTTGTTCTCATTCTTCGTTTCTGCTCATGCACTGATTGCTGTTACATTTATTGGGAAATGTCTTCCTGTTTAACATGTATACTTTGCATCGATTTGGTTTTCGTAAAAAGTATGGTAGAATATTACATCTAATTTACTTTAAATAAATATG TTGAAGTATG AATTTCTCATCCT CTTACTCTGGTTATTCTC ATAAATTTCAATTACATTCCAATAACTATT ]
[+] EMBL AW017389 [ TCACTCTAACACCGAAATCGATGTTCGATCTCTTCAAACACCTGATTTAACATGGGAGCGTGTTCGATCACAAGTGGATCATGTTATTTGGATGGATGGTAAACGTATTGTTCTTATAGCTGAGGGTCGTTTGGCGAATTTAAGCTGTTCAACTGTTCCATCTATTGTTGTCTCTGTTAGCGCCAGTACTCAAATATTAGCTTTGATTG AATTATACAATGCTCCTGCTGGTCGTTATAAAAATGATGTGTATTTATTACCGAAAAAAATGGATGAATATGTGGCAACATTGCATCTTCCATTATTCAATGGTCGAATAACTGAACTCACTGATGAACAAGCTCGATATTTAGGTGTAAATAAAACAGGACCATTTAAACCGAGTAATTACAAATACTAAACTTGTTCTCATTCTTCGTTTCTGCTCATGCACTGATTGCTGTCACATTTAT ]
[+] EMBL CD179157 [ TCACTCTAACACCGAAATCGATGTTCGATCTCTTCAAACACCTGATTTAACATGGGAGCGTGTTCGATCACAAGTGGATCATGTTATTTGGATGGATGGTAAACGTATTGTTCTTATAGCTGAGGGTCGTTTGGCGAATTTAAGTTGTTCAACTGTTCCATCTATTGTTGTCTCTGTTAGCGCCAGTACTCAAATATTAGCTTTGATTG AATTATACAATGCTCCTGCTGGTCGTTATAAAAATGATGTGTATTTATTACCGAAAAAAATGGATGAATATGTGG ]
[-] EMBL CD073994 [ TTAACATGGGAGCGTGTTCGATCACAAGTGGATCATGTTATTTGGATGGATGGTAAACGTATTGTTCTTATAGCTGAGGGTCGTTTGGCGAATNTAAGCTGTTCAACTGTTCCATCTATTGTTGTCTCTGTTAGCGCCAGTACTCAAATATTAGCTTTGATTG AATTATACAATGCTCCTGCTGGTCGTTATAAAAATGATGTGTATTTATTACCGAAAAAAATGGATGAATATGTGGCAACATTGCATCTTCCATTATTCAATGGTCGAATAACTGAACTCACTGATGAACAAGCTCGATATTTAGGTGTAAATAAAACAGGACCATTTAAACCGAGTAATTACAAATACTAAACTTGTTCTCATTCTTCGTTTCTGCTCATGCACTGATTGCTGTTACATTTATTGGGAAATGTCTTCCTGTTTAACATGTATACTTTGCATCGATTTGGTTTTCGTAAAAAGTATGGTAGAATATTACATCTAATTTACTTTAAATAAATATG TTGAAGTATG AATTTCTCATCCT CTTACTCTGTTTATTCTC ATAAATTTCAATTACATTCCAATAACTATTGTGTAAAAGAGTTGCTTTATATTAATCTAGTATATTTTCATGTTTCACCGTTAATTTAA CATATGTCTTTCCTTATTAATCTTGTTTGtaga ]
[-] EMBL CD146077 [ ATGTTATTTGGATGGATGGTAAACGTATTGTTCTTATAGCTGAGGGTCGTTTGGCGAATTTAAGCTGTTCAACTGTTCCATCTATTGTTGTCTCTGTTAGCGCCAGTGCTCAAATATTAGCTTTGATTG AATTATACAATGCTCCTGCTGGTCGTTATAGAAATGATGTGTATTTATTACCGAAAAAAATGGATGAATATGTGGCAACATTGCATCTTCCATTATTCAATGGTCGAATAACTGAACTCACTGGTGAACAGGCTCGATATTTAGGTGTAAATAAAACAGGACCATTTAAACCGAGTAATTACAAGTACTAAACTTGTTCTCATTCTTCGTT ]
[-] EMBL CD189134 [ TGGTAAACGTATTGTTCTTATAGCTGAGGGTCGTTTGGCGAATTTAAGTTGTTCAACTGTTCCATCTATTGTTGTCTCTGTTAGCGCCAGTACTCAAATATTAGCTTTGATTG AATTATACAATGCTCCTGCTGGTCGTTATAAAAACGATGTGTATTTATTACCGAAAAAAATGGATGAATATGTGGCAACATTGCATCTTCCATTATTCAATGGTCGAATAACTGAACTCACTGATGAACAAGCTCGATATTTAGGTG ]
[+] EMBL CD131412 [ GTAAACGTATTGTTCCTATAGCTGAGGGTCGTTTGGCGAATTTAAGCTGTTCAACTGTTCCATCTATTGTTGTCTCTGTTAGCGCCAGTACTCAAATATTAGCTTTGATTG AATTATACAATGCTCCTGCTGGTCGTTATAAAAATGATGTGTATTTATTACCGAAAAAAATGGATGAATATGTGGCAACATTGCATCTTCCATTATTCAATGGTCGAATAACTGAACTCACTGATGAACAAGCTCGATATTTAGGTGTAAATAAAACAGGACCATTTAAACCGAGTAATTACAAATACTAAACTTGTTCTCATTCTTCGTTTCTGCTCATGCACTGATTGCTGTTACATTTATTGGGAAATGTCTTCCTGTTTAACATGTATACTTTGCATCGATTTGGTTTTCGTAAAAAGTATGGTAGAATATTACATCTAATTTACTTTAAATAAATATG TTGAAGTATG AATTTCTCATCCT CTTACTCTGTTTATTCTC ATAAATTTCAATTACATTCCAATAACTATTGTGTAAAAGAGTTGCTTTATATTAATCTAGTATATTTTCATGTNTCA ]
[-] EMBL CD075177 [ TGTTCAACTGTTCCATCTATTGTTGTCTCTGTTAGCGCCAGTACTCAAATATTAGCTTTGATTG AATTATACAATGCTCCTGCTGGTCGTTATAAAAATGATGTGTATTTATTACCGAAAAAAATGGATGAATATGTGGCAACATTGCATCTTCCATTATTCAATGGTCGAATAACTGAACTCACTGATGAACAAGCTCGATATTTAGGTGTAAATAAAACAGGACCATTTAAACCGAGTAATTACAAATACTAAACTTGTTCTCATTCTTCGTTTCTGCTCATGCACTGATTGCTGTTACATTTATTGGGAAATGTCTTCCTGTTTAACATGTATACTTTGCATCGATTTGGTTTTCGTAAAAAGTATGGTAGAATATTACATCTAATTTACTTTAAATAAATATG TTGAAGTATG AATTTCTCATCCT CTTACTCTGTTTATTCTC ATAAATTTCAATTACATTCCAATAACTATTGTGTAAAAGAGTTGCTTTATATTAATCTAGTATATTTTCATGTTTCACCGTTAATTTAA CATATGTCTTTCCTTATTAATCTT GTTTGTA GATTTAGCGTTAAAAAAAGAAANTAATTTTTGAT]
consensusID : consensus_10702#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 618 fasta sequence
[TGAAAGGGTTAGAGTAAGCAGCCTTGTCTGACATCAGTCTACTTGTAATTCGTTTGTGAGCTTTCCTCTATACACAGCTTTGCAATTTAGTCCATCGTATGAATTCTGAATGATGATGTTGACGATTTTCTCAGGTACACCATAGTGTCGAAGTAGTTTCCATAATGTTCTCCTATCCACACTGTCTAATACTCTCTCATAATCAAGGTAGTCGATGTGTAGTAGAGAGTTCTATTCAATTGATTTTCCAACAATGATCTTCTTTTAAAACAAATTAGTGATTTATTCTAATTTCTCATATTCTATTCCAATTCATCTCTCAGGTTTTGGATGATGGTGGCGACTTAACTCATCAGCTGCATAAAAATTACAAGGAATTACTGGCTGGTATATGTGGAATAGTTGAGGAAAGTGTGACAGGTGTTCATCGTCTTTATCAGTACGTGAAATCTGGCACATTGGGAGTGCCAGCTATGAATATTAGCGACAGTATAACCAAATCAAAATTCGATAATTTTTATTTGTGCAAAGAATCTATTGTTGATTCCCTTAAGCGAACTACAGATATGATGATCAGTGGTAAGACCGTATTAGTATGTGGTTATGGTGAAGTTGGGA]
[+] EMBL CD115033 [TGAAAGGGTTAGAGTAAGCAGCCTTGTCTGACATCAGTCTACTTGTAATTCGTTTGTGAGCTTTCCTCTATACACAGCTTTGCAATTTAGTCCATCGTATGAATTCTGAATGATGATGTTGACGATTTTCTCAGGTACACCATAGTGTCGAAGTAGTTTCCATAATGTTCTCCTATCCACACTGTCTAATACTCTCTCATAATCAAGGTAGTCGATGTGTAGTAGAGAGTTCTATTCAATTGATTTTCCAACAATGATCTTCTTTTAAAACAAATTAGTGATTTATTCTAATTTCTCATATTCTATTCCAATTCATCTCTCAGGTTTTGGATGATGGTGGCGACTTAACTCATCAGCTGCATAAAAATTACAAGGAATTACTGGCTGGTATATGTGGAATAGTTGAGGAAAGTGTGACAGGTGTTCATCGTCTTTATCAGTACGTGAAATCTGGCACATTGGGAGTGCCAGCTATGAATATTAGCGACAGTATAACCAAATCAAAATTCGATAATTTTTATTTGTGCAAAGAATCTATTGTTGATTCCCTTAAGCGAACTACAGATATGATGATCAGTGGTAAGACCGTATTAGTATGTGGTTATGGTGAAGTTGGGA]
[+] EMBL CD115030 [TGAAAGGGTTAGAGTAAGCAGCCTTGTCTGACATCAGTCTACTTGTAATTCGTTTGTGAGCTTTCCTCTATACACAGCTTTGCAATTTAGTCCATCGTATGAATTCTGAATGATGATGTTGACGATTTTCTCAGGTACACCATAGTGTCGAAGTAGTTTCCATAATGTTCTCCTATCCACACTGTCTAATACTCTCTCATAATCAAGGTAGTCGATGTGTAGTAGAGAGTTCTATTCAATTGATTCTCCAACAATGATCTTCTTTTAAAACAAATTAGTGATTTATTCTAATTTCTCATATTCTATTCCAATTCATCTCTCAGGTTTTGGATGATGGTGGCGACTTAACTCATCAGCTGCATAAAAATTACAAGGAATTACTGGCTGGTATATGTGGAATAGTTGAGGAAAGTGTGACAGGTGTTCATCGTCTTTATCAGTACGTGAAATCTGGCACATTGGGAGTGCCAGCTATGAATATTAGCGACAGTATAACCAAACCAAAATTCGATAATTTTTATTTGTGCAAAGAATCTATTGTTGA ]
[+] EMBL CD115082 [TGAAAGGGTTAGAGTAAGCAGCCTTGTCTGACATCAGTCTACTTGTAATTCGTTTGTGAGCTTTCCTCTATACACAGCTTTGCAATTTAGTCCATCGTATGAATTCTGAATGATGATGTTGACGATTTTCTCAGGTACACCGTAGTGTCGAAGTAGTTTCCATAATGTTCTCCTATCCACACTGTCTAATACTCTCTCATAATCAAGGTAGTCGATGTGTAGTAGAGAGTTCTATTCAATTGATTTTCCAACAATGATCTTCTTTTAAAACAAATTAGTGATTTATTCTAATTTCTCATATTCTATTCCAATTCATCTCTCAGGTTTTGGATGATGGTGGCGACTTAACTCATCAGCTGCATAAAAATTACAAGGAATTACTGGCTGGTATATGTGGAATAGTTGAGGAAAGTGTGACAGGTGTTCATCGTCTTTATCAGTACGTGAAATCTGGCACATTGGGAGTGCCAGCTATGAATATTAGCGACAGTATAACCAAATCAAAATTCGATAATTTTTATTTGTG ]
[+] EMBL AF155786 [ CAGGTGTTCATCGTCTTTATCAGTACGTGANATCTNGCACATTGGGAGTGCCAGCTATGAATATTAGCGACAGTATAACCAAATCAAAA ]
consensusID : consensus_10702#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 545 fasta sequence
[GAATTATACAATGCTCCTGCTGGTCGTTATAAAAATGATGTGTATTTATTACCGAAAAAAATGGGAAATAGATGGCATGAGCGAAGTTAATTTTATTACAAGATGAATATGTGGCAACATTGCATCTTCCATTATTCAATGGTCGAATAACTGAACTCACTGATGAACAAGCTCGATATTTAGGTGTAAATAAAACAGGACCATTTAAACCGAGTAATTACAAATACTAAACTTGTTCTCATTCTTCGTTTCTGCTCATGCACTGATTGCTGTTACATTTATTGGGAAATGTCTTCCTGTTTAACATGTATACTTTGCATCGATTTGGTTTTCGTAAAAAGTATGGTAGAATATTACATCTAATTTACTTTAAATAAATATGTTGAAGTATGAATTTCTCATCCTCTTACTCTGTTTATTCTCATAAATTTCAATTACATTCCAATAACTATTGTGTAAAAGAGTTGCTTTATATTAATCTAGTATATTTTCATGTTTCACCGTTAATTTAACATATGTCTTTCCTTATTAATCTTGTTTGTAGA]
[-] EMBL AI067555 [GAATTATACAATGCTCCTGCTGGTCGTTATAAAAATGATGTGTATTTATTACCGAAAAAAATGGGAAATAGATGGCATGAGCGAAGTTAATTTTATTACAAGATGAATATGTGGCAACATTGCATCTTCCATTATTCAATGGTCGAATAACTGAACTCACTGATGAACAAGCTCGATATTTAGGTGTAAATAAAACAGGACCATTTAAACCGAGTAATTACAAATACTAAACTTGTTCTCATTCTTCGTTTCTGCTCATGCACTGATTGCTGTTACATTTATTGGGAAATGTCTTCCTGTTTAACATGTATACTTTGCATCGATTTGGTTTTCGTAAAAAGTATGGTAGAATATTACATCTAATTTACTTTAAATAAATATGTTGAAGTATGAATTTCTCATCCTCTTACTCTGTTTATTCTCATAAATTTCAATTACATTCCAATAACTATTGTGTAAAAGAGTTGCTTTATATTAATCTAGTATATTTTCATGTTTCACCGTTAATTTAACATATGTCTTTCCTTATTAATCTTGTTTGTAGA]
consensusID : consensus_10702#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 467 fasta sequence
[GAAACTTCTTCGACACTATGGTGTACCTGAAAAAATCGTCAACACCATGCGGAATTCATACGACGGACCTGGACCTTTTATCCCATTCACACCAACAGATGCAGGCCATGACAAGTAGTGCAGAAGAAGTCTCTGCATCAGTGGACCTCAACATACACAAGGGGAAAACCAAGATCCCCAAATACAATATGGCGAACACTAACCCGATCACACTTGATGGAGAAACTCTGTAAGAGATGGAAACGTTCAAGTACCTATCTGGACAACATCATCGATGGACAAGGAGGATACGATGCAGACGTAAAGGCAAGGATTGGTACAGTAAGGATAGCATTCCTATAGTTGAACAACATATTGAAACTCAAAACAGCTGCCAATTAACATAAAAGTCACATTCTCTAATACGAACATCAGGACCAGGTCCTACGGTACTGAGCTGGAACTCAGAGAATTACCAAAACCATAAT]
[+] EMBL CD068166 [GAAACTTCTTCGACACTATGGTGTACCTGAAAAAATCGTCAACACCATGCGGAATTCATACGACGGACCTGGACCTTTTATCCCATTCACACCAACAGATGCAGGCCATGACAAGTAGTGCAGAAGAAGTCTCTGCATCAGTGGACCTCAACATACACAAGGGGAAAACCAAGATCCCCAAATACAATATGGCGAACACTAACCCGATCACACTTGATGGAGAAACTCTGTAAGAGATGGAAACGTTCAAGTACCTATCTGGACAACATCATCGATGGACAAGGAGGATACGATGCAGACGTAAAGGCAAGGATTGGTACAGTAAGGATAGCATTCCTATAGTTGAACAACATATTGAAACTCAAAACAGCTGCCAATTAACATAAAAGTCACATTCTCTAATACGAACATCAGGACCAGGTCCTACGGTACTGAGCTGGAACTCAGAGAATTACCAAAACCATAAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10702#0 GGTGGATACCCANCGTAGTTTGGATGATGGTGGCGACTTAACTCATCAGCTGCATAAAAA 60
consensus_10702#2 ------------------------------------------------------------
consensus_10702#1 ------------------------------------------------------------
consensus_10702#3 ------------------------------------------------------------
consensus_10702#0 TTACAAGGAATTACTGACTGGTATATGTGGAATAGTTGAGGAAAGTGTGACAGGTGTTCA 120
consensus_10702#2 ------------------------------------------------------------
consensus_10702#1 ------------------------------------------------------------
consensus_10702#3 ------------------------------------------------------------
consensus_10702#0 TCGTCTTTATCAGTACGTGAAATCTGGCACATTGGGAGTGCCAGCTATGAATGTTAGCGA 180
consensus_10702#2 ------------------------------------------------------------
consensus_10702#1 ------------------------------------------------------------
consensus_10702#3 ------------------------------------------------------------
consensus_10702#0 CAGTATAACCAAATCAAAATTTGATAATTTTTATTTGTGCAAAGAATCTATTGTTGATTC 240
consensus_10702#2 ------------------------------------------------------------
consensus_10702#1 ------------------------------------------------------------
consensus_10702#3 ------------------------------------------------------------
consensus_10702#0 CCTTAAGCGAACTACAGATATGATGATCAGTGGTAAGACCGTATTAGTATGTGGTTATGG 300
consensus_10702#2 ------------------------------------------------------------
consensus_10702#1 ------------------------------------------------------------
consensus_10702#3 ------------------------------------------------------------
consensus_10702#0 TGAAGTTGGGAAAGGTGTTTGCCAAGCGTTAAGAGGATTGGGAGCTTTCGTTTGTATTTC 360
consensus_10702#2 ------------------------------------------------------------
consensus_10702#1 ------------------------------------------------------------
consensus_10702#3 ------------------------------------------------------------
consensus_10702#0 GGAAATAGATCCGATTTGTGCACTTCAAGCCTGCATGGATGGTTATCGTGTTGTAAAAAT 420
consensus_10702#2 ------------------------------------------------------------
consensus_10702#1 ------------------------------------------------------------
consensus_10702#3 ------------------------------------------------------------
consensus_10702#0 TGATGAAGTTATACGTTCAGTGGATATTGTGGTTACTTGCACTGGGAATAAAGGTGTCAT 480
consensus_10702#2 ------------------------------------------------------------
consensus_10702#1 ------------------------------------------------------------
consensus_10702#3 ------------------------------------------------------------
consensus_10702#0 TACTCGGGCTCATATGGATCAAATGAAAAGTGGTTGTGTTGTATGCAATATGGGTCACTC 540
consensus_10702#2 ------------------------------------------------------------
consensus_10702#1 ------------------------------------------------------------
consensus_10702#3 ------------------------------------------------------------
consensus_10702#0 TAACACCGAAATCGATGTTCGATCTCTTCAAACACCTGATTTAACATGGGAGCGTGTTCG 600
consensus_10702#2 ------------------------------------------------------------
consensus_10702#1 ------------------------------------------------------------
consensus_10702#3 ------------------------------------------------------------
consensus_10702#0 ATCACAAGTGGATCATGTTATTTGGATGGATGGTAAACGTATTGTTCTTATAGCTGAGGG 660
consensus_10702#2 ------------------------------------------------------------
consensus_10702#1 ------------------------------------------------------------
consensus_10702#3 ------------------------------------------------------------
consensus_10702#0 TCGTTTGGCGAATTTAAGTTGTTCAACTGTTCCATCTATTGTTGTCTCTGTTAGCGCCAG 720
consensus_10702#2 ------------------------------------------------------------
consensus_10702#1 --------------TGAAAGGGTTAGAGTAAGCAGCCTTGTCTGACATCAGTCTACTTGT 46
consensus_10702#3 ------------------------------------------------------------
consensus_10702#0 TACTCAAATATTAGCTTTGATTGAATTATACAATGCTCCTGCT--GGTCGTTATAAAAAT 778
consensus_10702#2 ----------------------GAATTATACAATGCTCCTGCT--GGTCGTTATAAAAAT 36
consensus_10702#1 AATTCGTTTGTGAGCTTTCCTCTA--TACACAGCTTTGCAATTTAGTCCATCGTATGAAT 104
consensus_10702#3 ------------------------------------------------------------
consensus_10702#0 GATGTGTATTTATTACCGAAAAAAATGG-------------------------------- 806
consensus_10702#2 GATGTGTATTTATTACCGAAAAAAATGGGAAATAGATGGCATGAGCGAAGTTAATTTTAT 96
consensus_10702#1 TCTGAATGATGAT-GTTGACGATTTTCTCAGGTACACCATAGTGTCGAAGTAGTTTCCAT 163
consensus_10702#3 ------------------------------------------------------------
consensus_10702#0 ------ATGAATATGTGGCAACATTGCATCTTCCATTATTCAATGGTCGA-ATAACTGAA 859
consensus_10702#2 TACAAGATGAATATGTGGCAACATTGCATCTTCCATTATTCAATGGTCGA-ATAACTGAA 155
consensus_10702#1 -----AATGTTCTCCTATCCACACTG--TCTAATACTCTCTCATAATCAA-GGTAGTCGA 215
consensus_10702#3 --------GAAACTTCTTCGACACTATGGTGTACCTGAAAAAATCGTCAACACCATGCGG 52
* * *** * ** ** * *
consensus_10702#0 CTCACTGATGAACAAGCTCGATATTTAGGTGTAAATAAAACAGGACCATTTAAACCG-AG 918
consensus_10702#2 CTCACTGATGAACAAGCTCGATATTTAGGTGTAAATAAAACAGGACCATTTAAACCG-AG 214
consensus_10702#1 TGTGTAGTAGAGAGTTCTATTCAATTGATTTTCCAACAATGATCTTCTTTTAAAACA-AA 274
consensus_10702#3 AATTCATACGACGGACCTGGACCTTTTATCCCATTCACACCAACAG-ATGCAGGCCATGA 111
** ** ** * * * * *
consensus_10702#0 T-AATTACAAATACTAAACTTGTTCTCATTCTTCGTTTCTGCTCATG-CACTGATTGCTG 976
consensus_10702#2 T-AATTACAAATACTAAACTTGTTCTCATTCTTCGTTTCTGCTCATG-CACTGATTGCTG 272
consensus_10702#1 TTAGTGATTTATTCTAAT----TTCTCATATTCTATTCCAATTCATCTCTCAGGTTTTGG 330
consensus_10702#3 CAAGTAGTGCAGAAGAAG-----TCTC-TGCATCAGTGGACCTCAACATACACAAGGGGA 165
* * * ** **** * * *** *
consensus_10702#0 TTACATTTATTGGGAAATGTCTTC--CTGTTTAACATGTATACTTTGCATCGATTTGGTT 1034
consensus_10702#2 TTACATTTATTGGGAAATGTCTTC--CTGTTTAACATGTATACTTTGCATCGATTTGGTT 330
consensus_10702#1 ATGATGGTGGCGACTTAACTCATCAGCTGCATAAAAATTACAAGGAATTACTGGCTGGTA 390
consensus_10702#3 AAACCAAGATCCCCAAATACAATATGGCGAACACTAACCCGATCACAC-TTGATGGAGAA 224
* * * * * * *
consensus_10702#0 TTCGTAAAA-AGTATGGTAGAATATTACATCTAATTT-AC-TTTAAATAAATATGTT-GA 1090
consensus_10702#2 TTCGTAAAA-AGTATGGTAGAATATTACATCTAATTT-AC-TTTAAATAAATATGTT-GA 386
consensus_10702#1 TATGTGGAATAGTTGAGGAAAGTGTGACAGGTGTTCA-TCGTCTTTATCAGTACGTG-AA 448
consensus_10702#3 ACTCTGTAAGAGATGGAAACGTTCAAGTACCTATCTGGACAACATCATCGATGGACAAGG 284
* ** ** * * * * * ** *
consensus_10702#0 AGTATGAATTTCTCATCCTCTTACTCTGTTTATTCTCA----TAAATTTCAATTACATTC 1146
consensus_10702#2 AGTATGAATTTCTCATCCTCTTACTCTGTTTATTCTCA----TAAATTTCAATTACATTC 442
consensus_10702#1 ATCTGGCACATTGGGAGTGCCAGCTATGAATATTAGCGACAGTATAACCAAATCAAAATT 508
consensus_10702#3 AGGATACGATGCAGACGTAAAGGCAAGGATTGGTACAGTAAGGATAGCATTCCTATAGTT 344
* * * * * * * * * *
consensus_10702#0 CAATAACTATT----GTGTAAAAGAGTTGCTTTATATTAATCTAGTATATTTTCATGTTT 1202
consensus_10702#2 CAATAACTATT----GTGTAAAAGAGTTGCTTTATATTAATCTAGTATATTTTCATGTTT 498
consensus_10702#1 CGATAATTTTTATTTGTGCAAAGAATCTATTGTTGATTCCCTTAAGCGAACTACAGATAT 568
consensus_10702#3 GAACAACATATTGAAACTCAAAACAGCTGCCA---ATTAACATAA--AAGTCACATTCTC 399
* ** * *** * * *** ** * **
consensus_10702#0 CACCGTTAATTTAACATAT--GTCTTTCCTTATTAATCTTGGTTGGCAGGATTTACCGTT 1260
consensus_10702#2 CACCGTTAATTTAACATAT--GTCTTTCCTTATTAATCTTG-TTTGTAGA---------- 545
consensus_10702#1 GATGATCAGTGGTAAGACC--GTATTAGTATGTGGTTATGGTGAAGTTGGGA-------- 618
consensus_10702#3 TAATACGAACATCAGGACCAGGTCCTACGGTACTGAGCTGGAACTCAGAGAATTACCAAA 459
* * * ** * * * *
consensus_10702#0 AAAAAAAAAACAAATTTTTGAT 1282
consensus_10702#2 ----------------------
consensus_10702#1 ----------------------
consensus_10702#3 ACCATAAT-------------- 467
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||