cluster # 10704

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Schistosoma mansoni
cluster # 10704 cluster # 10704 Sequences # 20 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10704#0 length = 1693 sequences # 12
consensus_10704#1 length = 596 sequences # 6

consensus_10704#2 length = 392 sequences # 1
consensus_10704#3 length = 304 sequences # 1

consensusID : consensus_10704#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 1693
fasta sequence

                              [GGTCCGAGGCGCATTTGGCCGAGGAAAGGACTGGAACGTTGTACCTGATTCCAAAGTTCCTAATGGCTGATGGAAAATTAGTAAAATTGCTTGTTCATACTGGTGTTACGAGGTATCTTGAGTTCAAAAGTATTGAAGAGAGCTACGTATTCGACAAAAATGCGATTCATAAGGTTCCAAGTAGCTCAAGCGAAGCTTTTTCAACAAGCTTGGTTTCCTTATTCGAAAAAATGAGACTCAAGAGTTTCCTGCAATGGGTTTTAGATGTCGATCCTGATAAACCTGCGACTTGGACTACCGTATATCCTCCACCTAAAAGTGTAAACAAGGATTCTATTGATGTGGCTTTTTCACATTTTGGTGTTAATGAGACTACCAAGACTCTCGTCGGCCACGCTATTTGTCTGTATACAGACGATTCTTACAGACAAAAAGCACCAGCTATCGAAGTCATCTCCAAAATGCAGCTCTATTATCGTTCGGTCAATCGATTTGGCAAATCTCCATATCTTTATCCTCTTTACGGTTTAGGAGAATTGCCCCAATCTTTTGCTCGACTTAGCGCAGTATATGGAGGTACATATATGCTTGAAAAACCAGTAGACGAAATTGTGATTGAGGATGGCAAAGTTGTTGGGGTGAAGTCTCAAGGTGAAACGGCACGTTGTGAAAAAGTGATATGTGATCCTAGCTATGCTCCAAATCGCGTCCGAAAGTGTGGTCAGGTTGTTCGTGCCATATGTATTTTAAATCATCCCATTCCAAATATCAAGAATGCTCTTTCATCACAAATAATCATTCCTCAAAACCAAGTTGGTCGACGTCATGATATATATGTTTCGTGTGTCTCTCATCCACATTACGTATGCCCAGAAAAATTCTTTGTTGTCTTAGTGGCGACAACTGTAGAAACATCGAACCCACACCAAGAACTTCAACCTGGTTTACAATTACTTGGACGTATTGAACATATTTTCTATTCGGTAGCAGATTTATTCGAACCTGTAGATGACGGTAGATCAAGTAATATATATATTTCAAAGAGTTACGATGCATCAACTCATTTCGAAAGTACATGTGCTGATGTGTTAGAAATGTACGAACGAATAACTGGAAGTCCATTTGACTTCAGTAAAGTTACAAGAGATTTGGAAGATGATTCATAACAATTATATTGTCACTATAAATCAATCTCTCACTGAATAAATGGAAACAAT-TTCAACAATAATAATCCCAATAATTCTTACCTTCATTATTTAAAACTTATTGACATTATTGGTCTACTACTTTGTCTTATTTTTTTTCTTAATTTGCTCTGTTGTTCATTCCAACCATTACTACTAACATTACTGTATGCGAACAACCCCGTACTGTTACACAACAGTGCCATGTTTTTGTTTGTGTTCACTTTCTAATATGTTCTACCATTGATTCATTATTTTTTAACCATTATTCAAATATTCCCTTATAAACACCAGTTTCACTAAATTCTCATATTTGGTTGTTTTTTTTTGTTTAACTGTTCTCATTTTGTTGTGATATCCCATTCGCTTTCTCGGTAAATTTTATCGTGTTCTGTAATGAACTTTTGTACTCTATCGTAATATTAATTGGAAGTCTCCAGTGTGACTAATTATGCTTACAATATTTGAAGCTTTAATACAAGTTTTTGAAATAAATATATCAGTATGAT]

[+] EMBL CD083273             [GGTCCGAGGCGCATTTGGCCGAGGAAAGGACTGGAACGTTGTACCTGATTCCAAAGTTCCTAATGGCTGATGGAAAATTAGTAAAATTGCTTGTTCATACTGGTGTTACGAGGTATCTTGAGTTCAAAAGTATTGAAGAGAGCTACGTATTCGACAAAAATGCGATTCATAAGGTTCCAAGTAGCTCAAGCGAAGCTTTTTCAACAAGCTTGGTTTCCTTATTCGAAAAAATGAGACTCAAGAGTTTCCTGCAATGGGTTTTAGATGTCGATCCTGATAAACCTGCGACTTGGACTACCGTATATCCTCCACCTAAAAGTGTAAACAAGGATTCTATTGATGTGGCTTTTTCACATTTTGGTGTTAATGAGACTACCAAGACTCTCGTCGGCCACGCTATTTGTCTGTATACAGACGATTCTTACAGACAAAAAGCACCAGCTATCGAAGTCATCTCCAAAATGCAGCTCTATTATCGTTCGGTCAATCGATTTGGCAAATCTCCATATCTTTATCCTCTTTACGGTTTAGGAGAATTGCCCCAATCTTTTGCTCGACTTAGCGCAGTATATGGAGGTACATATATGCTTGAAAAACCAGTAGACGAAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD119411             [                                                                                                                                                                                                                                                             ATGGGTTTTAGATGTCGATCCTGATAAACCTGCGACTTGGACTACCGTATATCCTCCACCTAGAAGTGTAAACAAGGATTCTATTGATGTGGCTTTTTCACATTTTGGTGTTAATGAGACTACCAAGACTCTCGTCGGCCACGCTATTTGTCTGTATACAGACGATTCTTACAGACAAAAAGCACCAGCTATAGAAGTCATCTCCAAAATACAGATATATTATCGTTCGGTCAATCGATTTGGCAAATCTCCATATCTTTATCCTCTTTACGGAATAGGAGAATTGCCCCAATCTTTTGCTCGACTTAGCGCAGTATATGGAGGTACATATATGCTTGAAAAACCAGTAGACGgt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD129260             [                                                                                                                                                                                                                                                                       GATGTCGATCCTGATAAACCTGCGACTTGGACTACCGTATATCCTCCACCTAAAAGTGTAAACAAGGATTCTATTGATGTGGCTTTTTCACATTTTGGTGTTAATGAGGCTACCAAGACTCTCGTCGGCCACGCTATTTGTCTGTATACAGACGATTCTTACAGACAAAAAGCACCAGCTATCGAAGTCATCTCCAAAATGCAGCTCTATTATCGTTCGGTCAATCGATTTGGCAAATCTCCATATCTTTATCCTCTTTACGGTTTAGGAGAATTGCCCCAATCTTTTGCTCGACTTAGCGCAGTATATGGAGGTACATATATGCTTGAAAAACCAGTAGACGAAATTGTGATTGAGGATGGCAAAGTTGTTGGGGTGAAGTCTCAAGGTGAAACGGCACGTTGTGAAAAAGTGATATGTGATCCTAGCTATGCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD179100             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AAATTGTGATTGAGGATGGCAAAGTTGTTGGGGTGAAGTCTCAAGGTGAAACGGCACGTTGTGAAAAAGTGATATGTGATCCTAGCTATGCTCCAAATCGCGTCCGAAAGTGTGGTCAGGTTGTTCGTGCCATATGTATTTTAAATCATCCCATTCCAAATATCAAGAATGCTCTTTCATCACAAATAATCATTCCTCAAAACCAAGTTGGTCGACGTCATGATATATATGTTTCGTGTGTCTCTCATCCACATTACGTATGCCCAGAAAAATTCTTTGTTGTCTTAGTGGCGACAACTGTAGAAACATCGAACCCACACCAAGAACTTCAACCTGGTTTACAATTACTTGGACGTATTGAACATATTTTCTATTCGGTAGCAGATTTATTCGAACCTGTAGATGACGGTAGATCAAGTAATATATATATTTCANAGAGTTACGATGCATCAACTCATTTCGAAAGTACATGTGCTGATGTGTTAGAAATGTACGAACGAATAACTGGAAGTCCATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD200659             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GATCCTAGCTATGCTCCAAATCGCGTCCGAAAGTGTGGTCAGGTTGTTCGTGCCATATGTATTTTAAATCATCCCATTCCAAATATCAAGAATGCTCTTTCATCACAAATAATCATTCCTCAAAACCAAGTTGGTCGACGTCATGATATATATGTTTCGTGTGTCTCTCATCCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD114434             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AGCTATGCTCCAAATCGCGTCCGAAAGTGTGGTCATGTTGTTCGTGCCATATGTATTTTAAATCATCCCATTCCAGATATCAAGAATGCTCTTTCATCACAAATAATCATTCCTCAAAACCAAGTTGGTCGACGTCATGATATATATGTTTCGTGTGTCTCTCATCCACATTACGTATGCCCAGAAAAATCCTTTGTTGTCTTAGTGGCGACAACTGTATAAACATCGAACCCACACCAAGAACTTCAACCTGGTGCACACTTACTTGGACGTATTGAACATATTTTCTATTCGGTAGCACATTTATTCGAACCTGTAGATGACGGCAGATCAAGTAATATATATATCTCAAAGAGTTACGATGCATCAACTCATTTCGAAAGTACATGTGCTGATGCGTCAGAAATGTACGAACGAATAACTGGAACTCCATGTGACTTCAGTAAAGTTACAAGAGATTTGGAAGATGATTCATAACAATTATATGGACACTATANATCAATCTCTCACTGAATAAATGGAAACAATCTTC ACAATACTAATCCCAATAATTCTTACCTTCATTTATTAAAACTTATTGAC                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD138506             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TCTTTCATCACAAATAATCATTCCTCAAAACCAAGTTGGTCGACGTCATGATATATATGTTTCGTGTGTCTCTCATCCACATTACGTATGCCCAGAAAAATTCTTTGTTGTCTTAGTGGCGACAACTGTAGAAACATCGAACCCACACCAAGAACTTCAACCTGGTTTACAATTACTTGGACGTATTGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD114652             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ACACCAAGAACTTCAGCCTGGTTTACAATTACTTGGACGTATTGAACATATTTTCTATTCGGTAGCAGATTTATTCGAACCTGTAGATGACGGTAGATCAAGTAATATATATATTTCAAAGAGTTACGATGCATCAACTCATTTCGAAAGTACATGTGCTGATGTGTTAGAAATGTACGAACGAATAACTGGAAGTCCATTTGACTTCAGTAAAGTTACAAGAAATTTGGAAGATGATTCATAACAATTATATTGTCATTATAAATCAATCTCTCACTGAATAAATGGAAACAAT TTCAACAATAATAATCCCAATAATTCTTACCTTCATTATTTAAAACTTATTGACATTATTGGTCTACTACTTTGTCTTATTTTTTTTCTTAATTTGCTCTGTTGTTCATTCCAACCATTACTACTAACATTAC                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CD076844             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AACAATTATATTGTCACTATAAATCAATCTCTCACTGAATAAATGGAAACAAT TTCAACAATAATAATCCCAATAATTCTTACCTTCATTATTTAAAACTTATTGACATTATTGGTCTACTACTTTGTCTTATTTTTTTTCTTAATTTGCTCTGTTGTTCATTCCAACCATTACTACTAACATTACTGTATGCGAACAACCCCGTACTGTTACACAACAGTGCCATGTTTTTGTTTGTGTTCACTTTCTAATATGTTCTACCATTGATTCATTATTTTTTAACCATTATTCAAATATTCCCTTATAAACCCCAGTTTCACTAAATTCTCATATTTGGTTGTTTTTTTTTGTTTAACTGTTCTCATTTTGTTGTGATATCCCATTCGCTTTCTCGGTAAATTTTATCGTGTTCTGTAATGAACTTTTGTACTCTATCGTAATATTAATTGGAAGTCTCCAGTGTGACTAATTATGCTTACAATATTTGAAGCTTTAATACAAGTTTTTGAAATAAATATATC        ]
[+] EMBL CD132366             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AATGGAAACAAT TTCAACAATAATAATCCCAATAATTCTTACCTTCATTATTTAAAACTTATTGACATTATTGGTCTACTACTTTGTCTTATTTTTTTTCTTAATTTGCTCTGTTGTTCATTCCAACCATTACTACTAACGTTACTGTATGCGAACAACCCCGTACTGTTACACAACAGTGCCATGTTTTTGTTTGTGTTCACTTTCTAATATGTTCTACCATTGATTCATTATTTTTTAACCATTATTCAAATATTCCCTTATAAACACCAGTTTCACTAAATTCTCATATTTGGTTGTTTTTTTTTGTTTAACTGTTCTCATTTTGTTGTGATATCCCATTCGCTTTCTCGGTAAATTTTATCGTGTTCTGTAATGAACTTTTGTACTCTATCGTAATA TAATTG                                                                                ]
[-] EMBL CD077132             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TATGCGAACAACCCCGTACTGTTACACAACAGTGCCATGTTTTTGTTTGTGTTCACTTTCTAATATGTTCGACCATTGATTCATTATTTTTTAACCATTATTCAAATATTCCCTTATAAACACCAGTTTCACTAAATTCTCATATTTGGTTGTTTTTTTTTGTTTAACTGTTCTCATTTTGTTGTGATATCCCATTCGCTTTCTCGGTAAATTTTATCGTGTTCTGTAATGAACTTTTGTACTCTATCGTAATATTAATTGGAAGTCTCCAGTGTGACTAATTATGCTTACAATATTTGAAGCTTTAATACAAGTTTTT                      ]
[+] EMBL AI021779             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GTGTTCACTTTCTAATATGTTCTACCATTGATTCATTAATTTTTAACCATTATTCAAATATTCCCTTATAAACACCAGTTTCACTAAATTCTCATATTTGGTTGTTTTTTTTTG TTAACTGTTCTCATTTTGTTGTGATAT CCATTCGCTTTCTCGGTAAATTTTATCGTGTTCTGTAATGAACTTTTGTACTCTATCGTAATATTAATTGGAAGTCTCCAGTGTGACTAATTATGCTTACAATATTTGAAGCTTTAATACAAGTTTTTGAAATAAATATATCAGTATGAT]




>consensus_10704#0
GGTCCGAGGCGCATTTGGCCGAGGAAAGGACTGGAACGTTGTACCTGATTCCAAAGTTCC
TAATGGCTGATGGAAAATTAGTAAAATTGCTTGTTCATACTGGTGTTACGAGGTATCTTG
AGTTCAAAAGTATTGAAGAGAGCTACGTATTCGACAAAAATGCGATTCATAAGGTTCCAA
GTAGCTCAAGCGAAGCTTTTTCAACAAGCTTGGTTTCCTTATTCGAAAAAATGAGACTCA
AGAGTTTCCTGCAATGGGTTTTAGATGTCGATCCTGATAAACCTGCGACTTGGACTACCG
TATATCCTCCACCTAAAAGTGTAAACAAGGATTCTATTGATGTGGCTTTTTCACATTTTG
GTGTTAATGAGACTACCAAGACTCTCGTCGGCCACGCTATTTGTCTGTATACAGACGATT
CTTACAGACAAAAAGCACCAGCTATCGAAGTCATCTCCAAAATGCAGCTCTATTATCGTT
CGGTCAATCGATTTGGCAAATCTCCATATCTTTATCCTCTTTACGGTTTAGGAGAATTGC
CCCAATCTTTTGCTCGACTTAGCGCAGTATATGGAGGTACATATATGCTTGAAAAACCAG
TAGACGAAATTGTGATTGAGGATGGCAAAGTTGTTGGGGTGAAGTCTCAAGGTGAAACGG
CACGTTGTGAAAAAGTGATATGTGATCCTAGCTATGCTCCAAATCGCGTCCGAAAGTGTG
GTCAGGTTGTTCGTGCCATATGTATTTTAAATCATCCCATTCCAAATATCAAGAATGCTC
TTTCATCACAAATAATCATTCCTCAAAACCAAGTTGGTCGACGTCATGATATATATGTTT
CGTGTGTCTCTCATCCACATTACGTATGCCCAGAAAAATTCTTTGTTGTCTTAGTGGCGA
CAACTGTAGAAACATCGAACCCACACCAAGAACTTCAACCTGGTTTACAATTACTTGGAC
GTATTGAACATATTTTCTATTCGGTAGCAGATTTATTCGAACCTGTAGATGACGGTAGAT
CAAGTAATATATATATTTCAAAGAGTTACGATGCATCAACTCATTTCGAAAGTACATGTG
CTGATGTGTTAGAAATGTACGAACGAATAACTGGAAGTCCATTTGACTTCAGTAAAGTTA
CAAGAGATTTGGAAGATGATTCATAACAATTATATTGTCACTATAAATCAATCTCTCACT
GAATAAATGGAAACAATTTCAACAATAATAATCCCAATAATTCTTACCTTCATTATTTAA
AACTTATTGACATTATTGGTCTACTACTTTGTCTTATTTTTTTTCTTAATTTGCTCTGTT
GTTCATTCCAACCATTACTACTAACATTACTGTATGCGAACAACCCCGTACTGTTACACA
ACAGTGCCATGTTTTTGTTTGTGTTCACTTTCTAATATGTTCTACCATTGATTCATTATT
TTTTAACCATTATTCAAATATTCCCTTATAAACACCAGTTTCACTAAATTCTCATATTTG
GTTGTTTTTTTTTGTTTAACTGTTCTCATTTTGTTGTGATATCCCATTCGCTTTCTCGGT
AAATTTTATCGTGTTCTGTAATGAACTTTTGTACTCTATCGTAATATTAATTGGAAGTCT
CCAGTGTGACTAATTATGCTTACAATATTTGAAGCTTTAATACAAGTTTTTGAAATAAAT
ATATCAGTATGAT

consensusID : consensus_10704#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 596
fasta sequence

                              [CATACGACACCATTACGAGTTGCCCGCGGGTTTTGACACTACTAAATGGATGAGAAGTACGACATTATTGTGCTGGGTACTGGTTTGAAGGAATGTATACTCAGTGGTTTGATGTCCGTTGAGGGAAAAAAGGTCTTGCACATGGATAGGAACAACTATTATGGTGCAGACACTACATCGGTTACACCACTCGAAGCACTTTTTCAAAGGTTCCATGTAAATGCAAGCCTTCAAGCATTTGGCCGAGGAAAGGACTGGAACGTTGACCTGATTCCAAAGTTCCTAATGGCTGATGGAAAATTAGTAAAATTGCTTGTTCATACTGGTGTTACGAGGTATCTTGAGTTCAAAAGTATTGAAGAGAGCTACGTATTCGACAAAAATGCGATTCATAAGGTTCCAAGTAGCTCAAGCGAAGCTTTTTCAACAAGCTTGGTTTCCTTATTCGAAAAAATGAGACTCAAGAGTTTCCTGCAATGGGTTTTAGATGTCGATCCTGATAAACCTGCGACTTGGACTACCGTATATCCTCCACCTAAAAGTGTAAACAAGGATTCTATTGATGTGGCTTTTTCACATTTTGGTGTTAATGAGAC]

[+] EMBL CD193903             [CATACGACACCATTACGAGTTGCCCGCGGGTTTTGACACTACTAAATGGATGAGAAGTACGACATTATTGTGCTGGGTACTGGTTTGAAGGAATGTATACTCAGTGGTTTGATGTCCGTTGAGGGAAAAAAGGTCTTGCACATGGATAGGAACAACTATTATGGTGCAGACACTACATCGGTTACACCACTCGAAGCACTTTTTCAAAGGTTCCATGTAAATGCAAGCCTTCAAGCATTTGGCCGAGGAA                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD136505             [tcTACGACACCATTACGAGTTGTCCGCGGGTTTTGACACTACTAAATGGATGAGAAGTACTTCCCTATTGTGCTGGGTACTGGTTTGAAGGAATGTATACTCAGTGGTTTGATGTCCGTTGAGGGAAAAAAGGTCTTGCACATGGATAGGAACAACTATTATGGTGCAGACACTACATCGGTTACACCACTCGAAGCACTTTTTCAAAGGTTCCATGTAAATGCAAGCCTTCAAGCATTTGGCCGAGGAAAGGACTGGAACGTTGACCTGATTCCAAAGTTCCTAATGGCTGATGGAAAATTAGTAAAATTGCTTGTTCATACTGGTGTTACGAGGTATCTTGAGTTCAAAAGTATTG                                                                                                                                                                                                                                              ]
[+] EMBL CD149752             [                                              TGGATGAGAAGTACGACATTATTGTGCTGGGTATTGGTTTGAAGGAATGTATACTCAGTGGTTTGATGTCCGTTGAGGGAAAAAAGGTCTTGCACATGGATAGGAACAACTATTATGGTGCAGACACTACATCGGTTACACCACTCGAAGCACTTTTTCAAAGGTTCCATGTAAATGCAAGCCTTCAAGCATTTGGCCGAGGAAAGGACTGGAACGTTGACCTGATTCCAAAGTTCCTAACGGCTGATGGAAAATTACTAAAATTGCTTGTTCAT                                                                                                                                                                                                                                                                                   ]
[-] EMBL CD157158             [                                                                                          GAATGTATACTCAGTGGTTTGATGTCCGTTGAGGGAAAAAAGGTCTTGCACATGGATAGGAACAACTATTATGGTGCAGACACTACATCGGTTACACCACTCGAAGCACTTTTTCAAAGGTTCCATGTAAATGCAAGCCTTCAAGCATTTGGCCGAGGAAAGGACTGGAGCGTTGACCTGATTCCAAAGTTCCTAATGGCTGATGGAAAATTAGTAAAATTGCTTGTTCATACTGGTGTTACGAGGTATCTTGAGTTCAAAAGTATTGAAGAGAGCTACGTATTCGACAAAAATGCGATTCATAAGGTTCCAAGTAGCTCAAGCGAAGCTTTTTCAACAAGCTTGGTTTCCTTATTCGAAAAAATGAGACTCAAGAGTTTCCTGCAATGGGTTTTAGATGTCGATCCTGATAAACCTGCGACTTGGACTACCGTATATCCTCCACCTAAAAGTGTAAACAAG                                            ]
[+] EMBL AW017160             [                                                                                                                                            CATGGATAGGAACAACTATTATGGTGCAGACACTACATCGGTTACACCACTCGAAGCACTTTTTCAAAGGTTCCATGTAAATGCAAGCCTTCAAGCATTTGGCCGAGGAAAGGACTGGAACGTTGACCTGATTCCAAAGTTCCTAATGGCTGATGGAAAATTAGTAAAATTGCTTGTTCATACTGGTGTTACGAGGTATCTTGAGTTCAAAAGTATTGAAGAGAGCTACGTATTCGACAAAAATGCGATTCATAAGGTTCCAAGTAGCTCAAGCGAAGCTTTTTCAACAAGCTTGGTTTCCTTATTCGAAAAAATGAGACTCAAGAGTTTCCTGCAATGGGTTTTAGATGTCGATCCTGATAAACCTGCGACTTGGACTACCGTATATCCTTCACCTANAAGTGTAAACAAGGATTCTATTGATGTGGCTTTTTCACATTTTGGTGTTAATGAGAC]
[-] EMBL CD152174             [                                                                                                                                                                                                                                                                               TTCCAAAGTTCCTAATGGCTGATGGAAAATTAGTAAAATTGCTTGTTCATACTGGTGTTACGAGGTATCTTGAGTTCAAAAGTATTGAAGAGAGCTACGTATTCGACAAAAATGCGATTCATAAGGTTCCAAGTAGCTCAAGCGAAGCTTTTTCAACAAGCTTGGTTTCCTTATTCGAAAAAATGAGACTCAAGAGTTTCCTGCAATGGGTTTTAG                                                                                                             ]




>consensus_10704#1
CATACGACACCATTACGAGTTGCCCGCGGGTTTTGACACTACTAAATGGATGAGAAGTAC
GACATTATTGTGCTGGGTACTGGTTTGAAGGAATGTATACTCAGTGGTTTGATGTCCGTT
GAGGGAAAAAAGGTCTTGCACATGGATAGGAACAACTATTATGGTGCAGACACTACATCG
GTTACACCACTCGAAGCACTTTTTCAAAGGTTCCATGTAAATGCAAGCCTTCAAGCATTT
GGCCGAGGAAAGGACTGGAACGTTGACCTGATTCCAAAGTTCCTAATGGCTGATGGAAAA
TTAGTAAAATTGCTTGTTCATACTGGTGTTACGAGGTATCTTGAGTTCAAAAGTATTGAA
GAGAGCTACGTATTCGACAAAAATGCGATTCATAAGGTTCCAAGTAGCTCAAGCGAAGCT
TTTTCAACAAGCTTGGTTTCCTTATTCGAAAAAATGAGACTCAAGAGTTTCCTGCAATGG
GTTTTAGATGTCGATCCTGATAAACCTGCGACTTGGACTACCGTATATCCTCCACCTAAA
AGTGTAAACAAGGATTCTATTGATGTGGCTTTTTCACATTTTGGTGTTAATGAGAC

consensusID : consensus_10704#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 392
fasta sequence

                              [GTCCCCAACAGTCCACCATCACATNCCGGATCGGACAAACCCCCGACTGGTTAACAAAGGTGGCCTAGGGGATTGGTTGTGGTCACANAGCCCAAAATGGTCCTACCATTGGATGCCCTTAAAATTTTTAACCCGTTATTCAAAATATTCCCTTTTAAACACCCAGTTTCACTAAATTCTCATATTTGGGTGTCCCATTTGGTTAACTGTTCTCATTTTGTTGTGATATCCCATTGGCTTTCTCGGTAAATTTTACCGTGTCCTGTAATGAACTTTTGTACTCTATCGTAATATTAATTGGAAGTCTCCAGTGTGACVAATTATGCTTACAATATTTGAAGCTTTAATACAAGTTTTTGAAATAAAAAAAAAAAAAAAAGGGTCATATATTT]

[-] EMBL SMAA69906            [GTCCCCAACAGTCCACCATCACATNCCGGATCGGACAAACCCCCGACTGGTTAACAAAGGTGGCCTAGGGGATTGGTTGTGGTCACANAGCCCAAAATGGTCCTACCATTGGATGCCCTTAAAATTTTTAACCCGTTATTCAAAATATTCCCTTTTAAACACCCAGTTTCACTAAATTCTCATATTTGGGTGTCCCATTTGGTTAACTGTTCTCATTTTGTTGTGATATCCCATTGGCTTTCTCGGTAAATTTTACCGTGTCCTGTAATGAACTTTTGTACTCTATCGTAATATTAATTGGAAGTCTCCAGTGTGACVAATTATGCTTACAATATTTGAAGCTTTAATACAAGTTTTTGAAATAAAAAAAAAAAAAAAAGGGTCATATATTT]




>consensus_10704#2
GTCCCCAACAGTCCACCATCACATNCCGGATCGGACAAACCCCCGACTGGTTAACAAAGG
TGGCCTAGGGGATTGGTTGTGGTCACANAGCCCAAAATGGTCCTACCATTGGATGCCCTT
AAAATTTTTAACCCGTTATTCAAAATATTCCCTTTTAAACACCCAGTTTCACTAAATTCT
CATATTTGGGTGTCCCATTTGGTTAACTGTTCTCATTTTGTTGTGATATCCCATTGGCTT
TCTCGGTAAATTTTACCGTGTCCTGTAATGAACTTTTGTACTCTATCGTAATATTAATTG
GAAGTCTCCAGTGTGACVAATTATGCTTACAATATTTGAAGCTTTAATACAAGTTTTTGA
AATAAAAAAAAAAAAAAAAGGGTCATATATTT

consensusID : consensus_10704#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 304
fasta sequence

                              [CCATGCTATGTGTTGTGGGGTTGCGCGTGTGTAAAATGGTCCTGCGCATTGAGTGCAAGAAAGAGCTGTACCCAGTGAGTGCAAATATTTCGCGTTATAAGAGCTCCAGTTTTACCGAGAATCTGCATGAGTTGGGTTGGTGCGNGTATTGGTTAACTGGTTCCCAGTGTGGGTGGGATAACCCAGTGCGCTTTCGCGGGTGAAATTTACGTTGTTCTGTAATGAACTTTTGTACTCTAACGTAATATTAATTGGAAGTCTCCAGTGTGACTAATTATGCTTACAATATTTGAAGCTTTAATAC]

[-] EMBL SMAA69917            [CCATGCTATGTGTTGTGGGGTTGCGCGTGTGTAAAATGGTCCTGCGCATTGAGTGCAAGAAAGAGCTGTACCCAGTGAGTGCAAATATTTCGCGTTATAAGAGCTCCAGTTTTACCGAGAATCTGCATGAGTTGGGTTGGTGCGNGTATTGGTTAACTGGTTCCCAGTGTGGGTGGGATAACCCAGTGCGCTTTCGCGGGTGAAATTTACGTTGTTCTGTAATGAACTTTTGTACTCTAACGTAATATTAATTGGAAGTCTCCAGTGTGACTAATTATGCTTACAATATTTGAAGCTTTAATAC]




>consensus_10704#3
CCATGCTATGTGTTGTGGGGTTGCGCGTGTGTAAAATGGTCCTGCGCATTGAGTGCAAGA
AAGAGCTGTACCCAGTGAGTGCAAATATTTCGCGTTATAAGAGCTCCAGTTTTACCGAGA
ATCTGCATGAGTTGGGTTGGTGCGNGTATTGGTTAACTGGTTCCCAGTGTGGGTGGGATA
ACCCAGTGCGCTTTCGCGGGTGAAATTTACGTTGTTCTGTAATGAACTTTTGTACTCTAA
CGTAATATTAATTGGAAGTCTCCAGTGTGACTAATTATGCTTACAATATTTGAAGCTTTA
ATAC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10704#2      ------------------------------------------------------------
consensus_10704#3      ------------------------------------------------------------
consensus_10704#0      GGTCCGAGGCGCATTTGGCCGAGGAAAGGACTGGAACGTTGTACCTGATTCCAAAGTTCC 60
consensus_10704#1      ------------------------------------------------------------
                                                                                   

consensus_10704#2      ------------------------------------------------------------
consensus_10704#3      ------------------------------------------------------------
consensus_10704#0      TAATGGCTGATGGAAAATTAGTAAAATTGCTTGTTCATACTGGTGTTACGAGGTATCTTG 120
consensus_10704#1      ------------------------------------------------------------
                                                                                   

consensus_10704#2      ------------------------------------------------------------
consensus_10704#3      ------------------------------------------------------------
consensus_10704#0      AGTTCAAAAGTATTGAAGAGAGCTACGTATTCGACAAAAATGCGATTCATAAGGTTCCAA 180
consensus_10704#1      ------------------------------------------------------------
                                                                                   

consensus_10704#2      ------------------------------------------------------------
consensus_10704#3      ------------------------------------------------------------
consensus_10704#0      GTAGCTCAAGCGAAGCTTTTTCAACAAGCTTGGTTTCCTTATTCGAAAAAATGAGACTCA 240
consensus_10704#1      ------------------------------------------------------------
                                                                                   

consensus_10704#2      ------------------------------------------------------------
consensus_10704#3      ------------------------------------------------------------
consensus_10704#0      AGAGTTTCCTGCAATGGGTTTTAGATGTCGATCCTGATAAACCTGCGACTTGGACTACCG 300
consensus_10704#1      ------------------------------------------------------------
                                                                                   

consensus_10704#2      ------------------------------------------------------------
consensus_10704#3      ------------------------------------------------------------
consensus_10704#0      TATATCCTCCACCTAAAAGTGTAAACAAGGATTCTATTGATGTGGCTTTTTCACATTTTG 360
consensus_10704#1      ------------------------------------------------------------
                                                                                   

consensus_10704#2      ------------------------------------------------------------
consensus_10704#3      ------------------------------------------------------------
consensus_10704#0      GTGTTAATGAGACTACCAAGACTCTCGTCGGCCACGCTATTTGTCTGTATACAGACGATT 420
consensus_10704#1      ------------------------------------------------------------
                                                                                   

consensus_10704#2      ------------------------------------------------------------
consensus_10704#3      ------------------------------------------------------------
consensus_10704#0      CTTACAGACAAAAAGCACCAGCTATCGAAGTCATCTCCAAAATGCAGCTCTATTATCGTT 480
consensus_10704#1      ------------------------------------------------------------
                                                                                   

consensus_10704#2      ------------------------------------------------------------
consensus_10704#3      ------------------------------------------------------------
consensus_10704#0      CGGTCAATCGATTTGGCAAATCTCCATATCTTTATCCTCTTTACGGTTTAGGAGAATTGC 540
consensus_10704#1      ------------------------------------------------------------
                                                                                   

consensus_10704#2      ------------------------------------------------------------
consensus_10704#3      ------------------------------------------------------------
consensus_10704#0      CCCAATCTTTTGCTCGACTTAGCGCAGTATATGGAGGTACATATATGCTTGAAAAACCAG 600
consensus_10704#1      ------------------------------------------------------------
                                                                                   

consensus_10704#2      ------------------------------------------------------------
consensus_10704#3      ------------------------------------------------------------
consensus_10704#0      TAGACGAAATTGTGATTGAGGATGGCAAAGTTGTTGGGGTGAAGTCTCAAGGTGAAACGG 660
consensus_10704#1      ------------------------------------------------------------
                                                                                   

consensus_10704#2      ------------------------------------------------------------
consensus_10704#3      ------------------------------------------------------------
consensus_10704#0      CACGTTGTGAAAAAGTGATATGTGATCCTAGCTATGCTCCAAATCGCGTCCGAAAGTGTG 720
consensus_10704#1      ------------------------------------------------------------
                                                                                   

consensus_10704#2      ------------------------------------------------------------
consensus_10704#3      ------------------------------------------------------------
consensus_10704#0      GTCAGGTTGTTCGTGCCATATGTATTTTAAATCATCCCATTCCAAATATCAAGAATGCTC 780
consensus_10704#1      ------------------------------------------------------------
                                                                                   

consensus_10704#2      ------------------------------------------------------------
consensus_10704#3      ------------------------------------------------------------
consensus_10704#0      TTTCATCACAAATAATCATTCCTCAAAACCAAGTTGGTCGACGTCATGATATATATGTTT 840
consensus_10704#1      ------------------------------------------------------------
                                                                                   

consensus_10704#2      ------------------------------------------------------------
consensus_10704#3      ------------------------------------------------------------
consensus_10704#0      CGTGTGTCTCTCATCCACATTACGTATGCCCAGAAAAATTCTTTGTTGTCTTAGTGGCGA 900
consensus_10704#1      ------------------------------------------------------------
                                                                                   

consensus_10704#2      ------------------------------------------------------------
consensus_10704#3      ------------------------------------------------------------
consensus_10704#0      CAACTGTAGAAACATCGAACCCACACCAAGAACTTCAACCTGGTTTACAATTACTTGGAC 960
consensus_10704#1      ------------------------------------------------------------
                                                                                   

consensus_10704#2      ------------------------------------------------------------
consensus_10704#3      ------------------------------------------------------------
consensus_10704#0      GTATTGAACATATTTTCTATTCGGTAGCAGATTTATTCGAACCTGTAGATGACGGTAGAT 1020
consensus_10704#1      ------------------------------------------------------------
                                                                                   

consensus_10704#2      ------------------------------------------------------------
consensus_10704#3      ------------------------------------------------------------
consensus_10704#0      CAAGTAATATATATATTTCAAAGAGTTACGATGCATCAACTCATTTCGAAAGTACATGTG 1080
consensus_10704#1      ------------------------------------------------------------
                                                                                   

consensus_10704#2      ------------------------------------------------------------
consensus_10704#3      ------------------------------------------------------------
consensus_10704#0      CTGATGTGTTAGAAATGTACGAACGAATAACTGGAAGTCCATTTGACTTCAGTAAAGTTA 1140
consensus_10704#1      ------------------------------------------------------------
                                                                                   

consensus_10704#2      ------------------------------------------------------------
consensus_10704#3      ------------------------------------------------------------
consensus_10704#0      CAAGAGATTTGGAAGATGATTCATAACAATTATATTGTCACTATAAATCAATCTCTCACT 1200
consensus_10704#1      ------------------------------------------------------------
                                                                                   

consensus_10704#2      ------------------------------------------------------------
consensus_10704#3      ------------------------------------------------------------
consensus_10704#0      GAATAAATGGAAACAATTTCAACAATAATAATCCCAATAATTCTTACCTTCATTATTTAA 1260
consensus_10704#1      ------------------------------------------------------------
                                                                                   

consensus_10704#2      ------------------------------------------------------------
consensus_10704#3      ------------------------------------------------------------
consensus_10704#0      AACTTATTGACATTATTGGTCTACTACTTTGTCTTATTTTTTTTCTTAATTTGCTCTGTT 1320
consensus_10704#1      ------------------------------------CATACGACACCATTACGAGTTGCC 24
                                                                                   

consensus_10704#2      ----GTCCCCAACAGTCCACCATCACATNCCGGATCGGACAAACCC--CCGACTGGTTAA 54
consensus_10704#3      ------------------------------------------------------------
consensus_10704#0      GTTCATTCCAACCATTACTACTAACATTACTGTATGCGAACAACCC--CGTACTGTTACA 1378
consensus_10704#1      CGCGGGTTTTGACACTACTAAATGGATGAGAAGTACGACATTATTGTGCTGGGTACTGGT 84
                                                                                   

consensus_10704#2      CAAAGGTGGCCTAGGGGATTGGTTGTG--GTCACANA-GCCCAAAATGGTCCTAC-CATT 110
consensus_10704#3      ----------CCATGCTATGTGTTGTGGGGTTGCGCGTGTGTAAAATGGTCCTGCGCATT 50
consensus_10704#0      CAACAGTG--CCATGTTTTTGTTTGTG--TTCACTT---TCTAATATG-TTCTAC-CATT 1429
consensus_10704#1      TTGAAGGAATGTATACTCAGTGGTTTGATGTCCGTTGAGGGAAAAAAGGTCTTGCACATG 144
                                   *          * **   *           ** * * *  * * *** 

consensus_10704#2      GGATGCCCTTAAAATTTTTAACCCGTTATTCAA--------AATATTC----C---CTTT 155
consensus_10704#3      GAGTGCAAGAAAGAGCTGTACCCAGTGAGTGCA--------AATATTT----CGCGTTAT 98
consensus_10704#0      GATT-----CATTATTTTTTAACCATTATT-CA--------AATATTC----C----CTT 1467
consensus_10704#1      GATAGGAACAACTATTATGGTGCAGACACTACATCGGTTACACCACTCGAAGCACTTTTT 204
                       *         *  *        *    * *  *        *  * *     *      *

consensus_10704#2      TAAACACCCAGTTTCACTAA--ATTCTCAT--ATTTGGGTGTCCCAT---TTGG----TT 204
consensus_10704#3      AAGAGCTCCAGTTTTACCGAGAATCTGCATGAGTTGGGTTGGTGCGNGTATTGG----TT 154
consensus_10704#0      ATAAACACCAGTTTCACTAA--ATTCTCAT--ATTTGGTTGTTTTTT--TTTGT----TT 1517
consensus_10704#1      CAAAGGTTCCATGTAAATGCAAGCCTTCAAGCATTTGGCCGAGGAAAGGACTGGAACGTT 264
                          *    *  * * *           **    ** **  *          **     **

consensus_10704#2      AACTG-TTCTCATTTTGT-TGTGATATCCCATTG-GCTTTCTCGG--TAAATTTTACCGT 259
consensus_10704#3      AACTGGTTCCCAGTGTGGGTGGGATAACCCAGTGCGCTTTCGCGGG-TGAAATTTACGTT 213
consensus_10704#0      AACTG-TTCTCATTTTGT-TGTGATATCCCATTC-GCTTTCTCGG--TAAATTTTATCGT 1572
consensus_10704#1      GACCTGATTCCAAAGTTC--CTAATGGCTGATGGAAAATTAGTAAAATTGCTTGTTCATA 322
                        **    *  **   *       **  *  *       **       *    * *     

consensus_10704#2      GTCCTGTAATGAACT--TTTGTACTCTATCGTAATATTAATTGGAA-GTCTCC------A 310
consensus_10704#3      GTTCTGTAATGAACT--TTTGTACTCTAACGTAATATTAATTGGAA-GTCTCC------A 264
consensus_10704#0      GTTCTGTAATGAACT--TTTGTACTCTATCGTAATATTAATTGGAA-GTCTCC------A 1623
consensus_10704#1      CTGGTGTTACGAGGTATCTTGAGTTCAAAAGTATTGAAGAGAGCTACGTATTCGACAAAA 382
                        *  *** * **  *   ***   ** *  *** *    *  *  * ** * *      *

consensus_10704#2      GTGTGACVAATTATGCTTACAATATTTGAAGC------TTTAATACAAGTTTTTGAAATA 364
consensus_10704#3      GTGTGACTAATTATGCTTACAATATTTGAAGC------TTTAATAC-------------- 304
consensus_10704#0      GTGTGACTAATTATGCTTACAATATTTGAAGC------TTTAATACAAGTTTTTGAAATA 1677
consensus_10704#1      ATGCGATTCATAAGGTTCCAAGTAGCTCAAGCGAAGCTTTTTCAACAAGCTTGGTTTCCT 442
                        ** **   ** * * *   * **  * ****      ***   **              

consensus_10704#2      AAAAAAAAAAAAAAAGGGTCATATATTT-------------------------------- 392
consensus_10704#3      ------------------------------------------------------------
consensus_10704#0      AATATATCAGTATGAT-------------------------------------------- 1693
consensus_10704#1      TATTCGAAAAAATGAGACTCAAGAGTTTCCTGCAATGGGTTTTAGATGTCGATCCTGATA 502
                                                                                   

consensus_10704#2      ------------------------------------------------------------
consensus_10704#3      ------------------------------------------------------------
consensus_10704#0      ------------------------------------------------------------
consensus_10704#1      AACCTGCGACTTGGACTACCGTATATCCTCCACCTAAAAGTGTAAACAAGGATTCTATTG 562
                                                                                   

consensus_10704#2      ----------------------------------
consensus_10704#3      ----------------------------------
consensus_10704#0      ----------------------------------
consensus_10704#1      ATGTGGCTTTTTCACATTTTGGTGTTAATGAGAC 596