These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10713#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 20 consensus length = 2545 fasta sequence [TATACTTCAGCGTTTTGATTCGGATGCTGAGGAAGAAATTTCAACATCTACAGAATCATTTCTCAAACAATTGGCCTCATGGGACAAGGAGGAAGTTCCAGAAAAGCTTCAAGAACGAGTACATTTTTCCAAACGTATTATTGCACGCCTCTTGTCTGCCTATGAAAAAATGGTTACTCACCAGTTTCGTTTGCGTCAACTGCTTGGAAACGCTACCGAAACCGCATCAGTTTCTGTTGGATCTGAACTTAGTGATAATACTATACCTATTCATTCTAGTTCATTGGCTCCTTATGGCACACACAACCCCGATTCTGAAGGTAACAATCATTCAACTAGTTCATCTCAGGAACCTGCTTCAACAACTTGCAGTAAATCTGGTGCAGTAGATTTGCACGAGGAAATAACACTTTTAAACAAGGAAAATTTTCGTCTTCAAAGCCTTTGTACAAATTTGCATTCTAAACATCGACAAAGCAGTCTTCGCCTTCGTGAACTGCAAGACTTAGCTCAGACGAATAGTGACGCGTCAGCGGAATGGCAAGCTAAGTATGAGGATTTAGATTATAAACTTGCAGAAGCGATGAAACAAGTTACGCGTTTAGATCATCGTCTGTATGAAGCTCAGGAAAAGAACAAGAAAATGGAAGTTGAATTATCAGCTCTCAAGTGCTCAGACTCTCCAGGTCGTGAAGATCCTTCAAATGTTGATGGATCAATTACACGGAATAAATATAATGACTTGGCTTGTGAACTGGAAGAGTACCGTGAGTTGGCAAATAATCGTGTAAATGAATTAGAACGCCTTCAACGTCACTTGGAAGACAAAGTTGCAGAATGTGCTTCATTGAATATGCAATTACGAGATATTCCCGAGCATATTATTATAGAATCTCCTCAATATCTATCCCTAAAAACTCAATTCAATATTCTATATAATGAAGCTATCCAACTAAGAAGTCAGTTAGAGGAAGCTAGAAGCACTATTCAAAATAACAGACACAGTCATCTAAAACAGATAGAAGAAATGGAGGCAAATGAAGCAGCTATACAAAATCAGATGCGATCTGAAATGCTCCTCATTGAAGGGCAATACTCTCAACTAAGACACAAATATGAAACTATGGAATTAGATTTCAAACAAGCATTGACGCATAATGAACAAGCTGGTCCTATCAGTTGTGAAATGCGTAGTCTAATTTCTACACTCCAAACACAAAACAAACAACTAAAAGCTGAGGTGACTCGTTATCGTAGAAAATGCGAAGAAACTGTACAAGAACGTGAAATGATACGTGTGGATTTGAAATGCACAGAGGACGAGTTAGTTCGTGTTCGTACGGCACTTTCAGAGGCAACTGCAGCTGTTATTGCTGCATGTGAAAAGTCGGATCAGTCGACACCATCAACCCCACAAAGCGCAAATCTGCCTCAGACTTCAGTAACAATGCCAGAT--GTTGGATCACCAACTGCTGATCCAGAATTAAAACCAAAAAATTCGACTCCTATAAAAGTAGAGGAAAGTGTTAAGCATAGTTCTCCAAGTTCATCTACTGCTCGACCTGGCACAGTTACCACTTCAGCAAGCTCTCAAGTCAATGGAAGTGCACCTGAAAAAGTTTTGAAAACTGAATCTACTCCCGACTTGCGTTCTAATCTATCGTGTTCTTCGCCATCTAATGAGATTATTCGTGATTTAAAAGAACAACTGAAGCGTTCACAAGAATCACAAAAAGAAATGTCTGTACTACTCAACATGTATAAAGTTATTCCAAAAGACCAAAGAGACAAAGCAGCACTTCTTCAATGTGAAGCCGAGCTGCGGGGTGAACTGACTGATGCTAGAAACGAAATCGATAAACTCCATGCAACTATCAAAGATCTTCAGTCACAGCAAACGAAGATGCAGCAACAACGGAAGTCATCATTAACATCTCCTGTTGAACCCAATTTAAAAATGTCACCTGCTGAACGTTCACTCACTTCTCATGGAAATATTCCACTCTCTCCGAAAACATGTAAGACGGGGTTGGTT-TCTCCTGAAGAAAAAAGCTCGAGTATATCCGGATCTCTGCCGATCACGTCTTGTGGAAAATCCAAAACTTCTGCTTCTGATTGGCAAATATCAGAGTTGCAAATGGAACTCTACATAGTTCGACGTAAGAGTCAATCTGTTGAAGAGCAGTTAAAACTTCACCAACAACGACTTGTAGCTGCCAAGCAGCAAGAGGATGTACTATTGAAGGAAATGGAAATAACTGTTCAAGCTTTTGAAGATGCACAAGAACAGAATGTTCGTCTTGTTAAAACGTTACGAGAAAAAGATGATGCTCATTTAAAGTTAATGGCAGAAAGAATGAAAACTGCTCAACTTGCTCGTTTACTGAAGGAAGATAAACAGCTTTTAGAAGAACAAATACGTCTGATGCAAGCAAAAATTGAAGCATTAAATCGTGCAGTTCTAAAGCAGGAAGAGAAAGAACGTTTATTGTTAACCAACTTAGCAACCTTAGAAAAAGAGCATCAGCTAGACAAAGTTCCGTGA] [+] EMBL CD152311 [TATACTTCAGCGTTTTGATTCGGATGCTGAGGAAGAAATTTCAACATCTACAGAATCATTTCTCAAACAATTGGCCTCATGGGACAAGGAGGAAGTTCCAGAAAAGCTTCAAGAACGAGTACATTTTTCCAAACGTATTATTGCACGCCTCTTGTCTGCCTATGAAAAAATGGTTACTCACCAGTTTCGTTTGCGTCAACTGCTTGGAAACGCTACCGAAACCGCATCAGTTTCTGTTGGATCTGAACTTAGTGATAATACTATACCTATTCATTCTAGTTCATTGGCTCCTTATGGCACACACAACCCCGATTCTGAAGGTAACAATCATTCAACTAGTTCATCTCAGGAACCTGCTTCAACAACTTGCAGTAAATCTGGTGCAGTAGATTTGCACGAGGAAATAACACTTTTAAACAAGGAAAATTTTCGTCTTCAAAGCCTTTGTA ] [+] EMBL CD182364 [ GAAAAGCTTCAAGAACGAGTACATTTTTCCAAACGTATTATTGCACGCCTCTTGTCTGCCTATGAAAAAATGGTTACTCACCAGTTTCGTTTGCGTCAACTGCTTGGAAACACTACCGAAACCGCATCAGTTTCTGTTGGATCTGAACTTAGTGATAATACTATACCTATTCATTCTAGTTCATTGGCTCCTTATGGCACACACAACCCCGATTCTGAAGGTAACAATCATTCAACTAGTTCATCTCAGGAACCTGCTTCAACAACTTGCAGTAAATCTGGTGCAGTAGATTTGCACGAGGAAATAACACTTTTAAACAn ] [+] EMBL CD191644 [ AATAACACTTTTAAACAAGGAAAATTTTCGTCTTCAAAGCCTTTGTACAAATTTGCATTCTAAACATCGACAAAGCAGTCTTCGCCTTCGTGAACTGCAAGACTTAGCTCAGACGAATAGTGACGCGTCAGCGGAATGGCAAGCTAAGTATGAGGATTTAGATTATAAACTTGCAGAAGCGATGAAACAAGTTACGCGTTTAGATCATCGTCTGTATGAAGCTCAGGAAAAGAACAAGAAAATGGAAGTTGAATTATCAGCTCTCAAGTGCTCAGACTCTCCAGGTCGTGAAGATCCTTCAAATGTTGATGGATCAATTACACGGAATAAATATAATGACTTGGCTTGTGAACTGGAAGAGTACCGTGAGTTGGCAAATAATCGTGTAAATGAATTAGAACGCCTTCAACGTCACTTGGAAGACAAAGTTGCAGAATGTGCTTCATTGAATATGCAATTACGAGATATTCCCGAGCATATTATTATAGAATCTCCTCAATATCTATCCCTAAAAACTCAATTCAATATTCTATATAATGAAGCTATCCAACTAAGAAGTCAGTTAGAGGA ] [+] EMBL CD094081 [ ATTATCAGCTCTCAAGTGCTCAGACTCTCCAGGTCGCGAAGATCCTTCAAATGTTGATGGATCAGTTACACGGAATAAATATAATGACTTGGCTTGTGAACTGGAAGAGTACCGTGAGTTGGCAAATAATCGTGTAAATGAATTAGAACGCCCTCAACGTCACTTGGAAGACAAAGTTGCAGAATGTGCTTCATTGAATATGCAATTACGAGATATTCCCGAGCATATTATTATAGAATCTCCTCAATATCTATCCCTAAAAACTCAATTCAATATTCTATATAATGAAGCTATCCAACTAAGAAGTCAGTTAGAGGAAGCTAGAAGCACTATTCAAAATAACAGACACAGTCATCTAAAACAGATAGAAGAAATG ] [-] EMBL CD152168 [ TTATCAGCTCTCAAGTGCTCAGACTCTCCAGGTCGTGAAGATCCTTCAAATGTTGATGGATCAATTACACGGAATAAATATAATGACTTGGCTTGTGAACTGGAAGAGTACCGTGAGTTGGCAAATAATCGTGTAAATGAATTAGAACGCCTTCAACGTCACTTGGAAGACAAAGTTGCAGAATGTGCTTCATTGAATATGCAATTACGAGATATTCCCGAGCATATTATTATAGAATCTCCTCAATATCTATCCCTAAAAACTCAATTCAATATTCTATATAATGAAGCTATCCAACTAAGAAGTCAGTTAGAGGAAGCTAGAAGCACTATTCAAAATAACAGACACAGTCATCTAAAACAGATAGAAGAAATGGAGGCAAATGAAGCAGCTATACAAAATCAGATGCGAT ] [+] EMBL CD161053 [ TATTCTATATAATGAAGCTATCCAACTAAGAAGTCAGTTAGAGGAAGCTAGAAGCACTATTCAAAATAACAGACACAGTCATCTAAAACAGATAGAAGAAATGGAGGCAAATGAAGCAGCTATACAAAATCAGATGCGATCTGAAATGCTCCTCATTGAAGGGCAATACTCTCAACTAAGACACAAATATGAAACTATGGAATTAGATTTCAAACAAGCATTGACGCATAATGAACAAGCTGGTCCTATCAGTTGTGAAATGCGTAGTCTAATTTCTACACTCCAAACACAAAACAAACAACTAAAAGCTGAGGTGACTCGTTATCGTAGAAAATGCGAAGAAACTGTACAAGAACGTGAAATGATACGTGTGGATTTGAAATGCACAGAGGACGAGTTAGTTCGTGTTCGTACGGCACTTTCAGAGGCAACTGCAGCTGTTATTGCTGCATGTGAAAAGTCGGATCAG ] [-] EMBL CD161282 [ ATTCTATATAATGAAGCTATCCAACTAAGAAGTCAGTTAGAGGAAGCTAGAAGCACTATTCAAAATAACAGACACAGTTATCTAAAACAGATAGAAGAAATGGAGGCAAATGAAGCAGCTATACAAAATCAGATGCGATCTGAAATGCTCCTCATTGAAGGGCAATACTCTCAACTAAGACACAAATATGAAACTATGGAATTAGATTTCAAACAAGCATTGACGCATAATGAACAAGCTGGTCCTATCAGTTGTGAAATGCGTAGTCTAATTTCTACACTCCAAACACAAAACAAACAACTAAAAGCTGAGGTGACTCGTTATCGTAGAAAATGCGAAGAAACTGTACAAGAACGTGAAATGATACGTGTGGATTTGAAATGCACAGAGGACGAGTTAGTTCGTGTTCGTACGGCACTTTCAGAGGCAACTGCAGCTGTTATTGCTGCATGTGAAAAGTCGGATCAGT ] [-] EMBL CD160942 [ ATTCTATATAATGAAGCTATCCAACTAAGAAGTCAGTTAGGGGAAGCTAGAAGCACTATTCAAAATAACAGACACAGTCATCTAAAACAGATAGAAGAAATGGAGGCAAGTGAAGCAGCTATACAAAATCAGATGCGATCTGAAATGCTCCTCATTGAAGGGCAATACTCTCAACTAAGACACAAATATGAAACTATGGAATTAGATTTCAAACAAGCATTGACGCATAATGAACAAGCTGGTCCTATCAGTTGTGAAATGCGTAGTCTAATTTCTACACTCCAAACACAAAACAAACAACTAAAAGCTGAGGTGACTCGTTATCGTAGAAAATGCGAAGAAACTGTACAAGAACGTGAAATGATACGTGTGGATTTGAAATGCACAGAGGACGAGTTAGTTCGTGTTCGTACGGCACTTTCAGAGGCAACTGCAGCTGTTATTGCTGCATGTGAAAAGTCGGATCAGT ] [-] EMBL CD160835 [ AACTAAGAAGTCAGTTGGAGGAAGCTAGAAGCACTATTCAAAATAACAGACACAGTCATCTAAAACGGATAGAAGAAATGGAGGCAAATGAAGCAGCTATACGAAATCAGATGCGATCTGAAATGCTCCTCATTGAAGGGCAATACTCTCAACTAAGACACAAATATGAAACTATGGAATTAGATTTCAAACAAGCATTGACGCATAATGAACAAGCTGGTCCTATCAGTTGTGAAATGCGTAGTTTAATTTCTACACTCCAAACACAAAACAAACA ] [-] EMBL CD161070 [ AACTAAGAAGTCAGTTAGAGGAAGCTAGAAGCACTATTCAAAATAACAGACACAGTCATCTAAAACAGATAGAAGAAATGGAGGCAAATGAAGCAGCTATACAAAATCAGATGCGATCTGAAATGCTCCTCATTGAAGGGCAATACTCTCAACTAAGACACAAATATGAAACTATGGAATTAGATTTCAAACAAGCATTGACGCATAATGAACAAGCTGGTCCTATCAGTTGTGAAATGCGTAGTCTAATTTCTACACTCCAAACACAAAACAAACAACT AAAGCTGAGGTGACTCGTTATCGTAGAAAATGCGAAGAAACTGTACAAGAACGTGAAATGATACGTGTGGATTTGAAATGCACAGAGGACGAGTTAGTTCGTGTTCGTACGGCACTTTCAGAGGCAACTGCAGCTGTTATTGCTGCATGTGAAAAGTCGGATCAGT ] [-] EMBL CD164728 [ TTCGTGTTCGTACGGCACTTTCAGAGGCAACTGCAGCTGTTATTGCTGCATGTGAAAAGTCGGATCAGTCGACACCATCAACCCCACAAAGCGCAAATCTGCCTCAGACTTCAGTAACAATGCCAGATAGGTTGGATCACCAACTGCTGATCCAGAATTAAAACCAAAAAATTCGACTCCTATAAAAGTAGAGGAAAGTGTTAAGCATAGTTCTCCAAGTTCATCTACTGCTCGACCTGGCATAGTTACCACTTCAGCAAGCTCTCAAGTCAATGGAAGTGCACCTGAAAAAGTTTTGAAAACTGAATCTACTCCCTACTTGCGTTCTAATCTATCGTGTTCTTCGCCATCTAATGAGATTATTCGTGATTTAAAAGAACAACTGAAGCGTTCACAAGAATCACAAAAAGAAATGTCTGTACTACTCAACATGTATAAAGTTATTCCAAAAGACCAAAGAGACAAAGCAGCACTTCTTCAATGTGAAGCCGAGCTGCGGGGTGAACTGACTGATGCTAGAAACGAA ] [-] EMBL CD128325 [ TGCAGCTGTTATTGCTGCATGTGAAAAGTCGGATCAGTCGACACCATCAACCCCACAAAGCGCAAATCTGCCTCAGACTTCAGTAACAATGCCAGAT GTTGGATCACCAACTGCTGATCCAGAATTAAAACCAAAAAATTCGACTCCTATAAAAGTAGAGGAAAGTGTTAAGCATAGTTCTCCAAGTTCATCTACTGCTCGACCTGGCACAGTTACCACTTCAGCAAGCTCTCAAGTCAATGGAAGTGCACCTGAAAAAGTTTCGAAAACTGAATCTACTCCCGACTTGCGTTCTAATCTATCGTGTTCTTCGCCATCTAATGAGATTATTCGTGATTTAAAAGAACAACTGAAGCGTTCACAAGAATCACAAAAAGAAATGTCTGTACTACTCAACATGTATAAAGTTATTCC ] [-] EMBL CD128359 [ TGCAGCTGTTATTGCTGCATGTGAAAAGTCGGATCAGTCGACACCATCAACCCCACAAAGCGCAAATCTGCCTCAGACTTCAGTAACAATGCCAGAT GTTGGATCACCAACTGCTGATCCAGAATTAAAACCAAAAAATTCGACTCCTATAAAAGTAGAGGAAAGTGTTAAGCATAGTTCTCCAAGTTCATCTACTGCTCGACCTGGCACAGTTACCACTTCAGCAAGCTCTCAAGTCAATGGAAGTGCACCTGAAAAAGTTTTGAAAACTGAATCTACTCCCGACTTGCGTTCTAATCTATCGTGTTCTTCGCCATCTAATGAGATTATTCGTGATTTAAAAttcc ] [-] EMBL CD065496 [ TGCAGCTGTTATTGCTGCATGTGAAAAGTCGGATCAGTCGACACCATCAACCCCAC AAGCGC AATCTGCCTCAGACTTCAGTAACAATGCCAGAT GTT GATCACCAACTGCTGATCCAGAATTAAAACC AAAATTCGAC ] [+] EMBL CD149088 [ CATCAACCCCATAAAGCGCAAATCTGCCTCAGACTTCAGTAACAATGCCAGAT GTTGGATCACCAACTGCTGATCCAGAATTAAAACCAAAAAATTCGACTCCTATAAAAGTAGAGGAGAGTGTTAAGCATAGTTCTCCAAGTTCATCTACTGCTCGACCTGGCACAGTTACCACTTCAGCAAGCTCTCAAGTCAATGGAAGTGCACCTGAAAAAGTTTTGAAAACTGAATCTACTCCCGACTTGCGTTCTAATCTATCGTGTTCTTCGCCATCTAATGAGATTATTCGTGATTTAAAAGAACAACTGAAGCGTTCACAAGAATCACAAAAAGAAATGTCTGTACTACTCAACATGTATAAAGTTATTCCAAAAGACCAAAGAGACAAAGCAGCACTTCTTCAATGTGAAG ] [-] EMBL CD138802 [ TTGAAAACTGAATCTACTCCCGACTTGCGTTGTAATCTATCGTGTTCTTCGCCATCTAATGAGATTATTCGTGATTTAAAAGAACAACTGAAGCGTTCACAAGAATCACAAAAAGAAATGTCTGTACTACTCAACGTGTATAAAGTTATTCCAAAAGACCAAAGAGACAAAGCAGCACTTCTTCAATGTGAAGCCAAGCTGCGGGGTGAACTGACTGATGCTAGAAACGAAATCGATAAACTCCATGCAACTATCAAAGATCTTCAGTCACAGCAAACGAAGATGCAGCAACAACGGAAGTCATCATTAACATCTCCTGTTGAACCCAATTTAAAAATGTCACCTGCTGAACGTTCACTCACTTCTCATGGAAATA ] [+] EMBL CD083593 [ AATTTAAAAATGTCACCTGCTG ACGTTCACTCACTTCTCATGGAAATATTCCACTCTCTCCGAAAACATGTAAGACGGGGTTGGTT TCTCCTGAAGAAAAAAGCTCGAGTATATCCGGATCTCTGCCGATCACGTCTTGTGGAAAATCCAAAACTTCTGCTTCTGATTGGCAAATATCAGAGTTGCAAATGGAACTCTACATAGTTCGACGTAAGAGTCAATCTGTTGAAGAGCAGTTAAAACTTCACCAACAACGACTTGTAGCTGCCAAGCAGCAAGAGGATGTACTATTGAAGGAAATGGAAATAACTGTTCAAGCTTTTGAAGATGCACAAGAACAGAATGTTCGTCTTGTTAAAACGTTACGAGAAAAAGATGATGCTCATTTAAAGTTAATGGCAGAAAGAATGAAAACTGCTCAACTTGCTCGTTTACTGAAGGAAGATAAACAGCTTTTAGAAGAACAAATACGTCTGATGCAAGCAAAAATTGAAGCATTAAATCGTGCAGTTCTAAAGCAGGA ] [+] EMBL CD083488 [ GGGGTTGGTTNTCTCCTGAAGAAAAAAGCTCGAGTATATCCGGATCTCTGCCGATCACGTCTTGTGGAAAATCCAAAACTTCTGCTTCTGATTGGCAAATATCAGAGTTGCAAATGGAACTCTACATAGTTCGACGTAAGAGTCAATCTGTTGAAGAGCAGTT AAACTTCACCAACAACGACTTGTAGCTGCCAAGCAGCAAGAGGATGTACTATTGAAGGAAATGGAAATAACTGTTCAAGCTTTTGAAGATGCACAAGAACAGAATGTTCGTCTTGTTAAAACGTTACGAGAAAAAGATGATGCTCATTTAAAGTTAATGGCAGAAAGAATGAAAACTGCTCAACTTGCTCGTTTACTGAAGGAAGATAAACAGCTTTTAGAAGAACAAATACGTCTGATGCAAGCAAAAATTGAAGCATTCAATCGTGCAGTTCTAAAGCAGGAAGAGA ] [+] EMBL CD185430 [ CAGAGTTGCAAATGGAACTCTACATAGTTCGACGTAAGAGTCAATCTGTTGAAGAGCAGTTAAAACTTCACCAACAACGACTTGTAGCTGCCAAGCAGCAAGAGGATGTACTATTGAAGGAAGTGGAAATAACTGTTCAAGCTTTTGAAGATGCACAAGAACAGAATGTTCGTCTTGTTAAAACGTTACGAGAAAAAGATGATGCTCATTTAAAGTTAATGGCAGAAAGAATGAAAACTGCTCAACTTGCTCGTTTACTGAAGGAAGATAAACAGCTTTTAGAAGAACAAATACGTCTGATGCAAGCAAAAATTGAAGCATTAAATCGTGCAGTTCTAAAGCAGGAAGAGAAAGAACGTTTATTGTTAACCAACTTA ] [-] EMBL CD065500 [ caCAAGAGTATGTACTATTGAAGGAAATGGAAATAACTGTTCAAGCTTTTGAAGATGCACAAGAACAGAATGTTCGTCTTGTTAAAACGTTACGAGAAAAAGATGATGCTCATTTAAAGTTAATGGCAGAAAGAATGAAAACTGCTCAACTTGCTCGTTTACTGAAGGAAGATAAACAGCTTTTAGAAGAACAAATACGTCTGATGCAAGCAAAAATTGAAGCATTAAATCGTGCAGTTC AAAGCAGGAAGAGAAAGAACGTTTA TG TAACC ACTTAGCAACCTTAGAAAAAGAGCATCAGCTAGACAAAGTTCCGTGA] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||