cluster # 10718

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 10718 cluster # 10718 Sequences # 20 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10718#0 length = 1121 sequences # 7
consensus_10718#1 length = 539 sequences # 4

consensus_10718#2 length = 539 sequences # 7
consensus_10718#3 length = 367 sequences # 2

consensusID : consensus_10718#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1121
fasta sequence

                              [CAGTTCATCGGGTCCAGTGGATTCACCTATGTCAAGCTTAACTAGCAGACCAAAGACATCGAGTTCTTTAATGGTCACGCTGTCCAGTGCTTGTGTGGGGGGATTTTCATGGACTGGTGAGAAGGGTGTTTCTATGGTGTATACATCGCCAAAGTATTTAGAGAATACTTGAGCTTCGCCAAAGTCGTCCTCCACTAGTGATGTGGCAGTACTGTCTCCTCATAGCGAAGGAACATTTCTTCTTCTTTTTGTCCTTTGGTTTATATACGAATACAAGCGTTTAGGGCATTCTATGGATTCCCTAACGATTTTCTCTTCGTACAGCTTTCTGGCCTTACGGAGGGTCGAGGCACAGGTATTTCGAGCCTTTTGATACTGAGATTTTGCCTCGTCAGTCCCCAGTAACCTAAATCTATCCCACATTTTCCTTCTTTTACGGAGAAGGATGCGAACCTCCCTACTGAACCACGGTGGGGAGTTTCTCGGTCTCTTAGGTGTAGTCCAAGGGATGTGGG----GGGTGGTAACTTTAAAGTATAAATTCCGGAATACGTTCCAAGCCGTTTCGATTGATGACTCTGGGTCTAATTTCCAATCTACTAATGATGCTGATTTCATGATGTCTGGTATGTTTGCTTTCTAGACGTTAGGTCTGGATTGAGCTGAGACGTGCTCGTGATCGACAGTTATATGGAAGTCAAAGCTTGAAACTGCATGATCACTTTTGCCTAGGGGTGGCATGTAATCCAGGTTTGCAACGTCATCCTCATAACGAGTCAATATAAGATCTAGTAAGGATGATGCAGAACCCGGGTCGTACCTAGTTGCTTCCTTCACGTGTTGCACTAGGGCACATGTGATTACCGCATCAACTAGTTCCTGTTCGAAGGAATTTGCTGACTGCGATAGATCAAACTAAGCAGCAACTCTTGTCCCCTACATTTCAGGCGGCAGCTAACATTCATACGTCCCACTCTCATGGGATACACTGTCGATAATAGTGAATGGAATAGCATTCCTAATGAATAGAGCTACTCCCCCTCCTTTGCGCGTTTGTATTCTATCGGCCCTTACTAATGTAAAACCCTCGAAATCAAGTTCCCTACTATCTATAGACGGCGTCA]

[-] EMBL CD111097             [CAGTTCATCGGGTCCAGTGGATTCACCTATGTCAAGCTTAACTAGCAGACCAAAGACATCGAGTTCTTTAATGGTCACGCTGTCCAGTGCTTGTGTGGGGGGATTTTCATGGACTGGTGAGAAGGGTGTTTCTATGGTGTATACATCGCCAAAGTATTTAGAGAATACTTGAGCTTCGCCAAAGTCGTCCTCCACTAGTGATGTGGCAGTACTGTCTCCTCATAGCGAAGGAACATTTCTTCTTCTTTTTGTCCTTTGGTTTATATACGAATACAAGCGTTTAGGGCATTCTATGGATTCCCTAACGATTTTCTCTTCGTACAGCTTTCTGGCCTTACGGAGGGTTGAGGCACAGGTATTTCGAGCCTTTTGATACTGGGATTTTGCCTCGTCAGTCCCCAGTAACCTAAATCTATCCCACATTTTCCTTCTTTTACGGAGAAGGATGTGAACCTCCCTACTGAACCACGGTGGGGGGTTTCTCGGCCCCTTAGGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD157115             [                                                                                                                                                                                                                                                               TTGGTTNATATACGAATACAAGCGTTTAGGGCATTCTATGGATTCCCTAACGATTTTCTCTTCGTACAGCTTTCTGACCTTACGGAGGGTCGAGGCACAGGTATTTCGAGCCTTTTGATACTGAGATTTTGCCTCGTCAGTCCCCAGTAACCTAAATCTGTCCCACATTTTCCTTCTTTTACGGAGAAGGATGCGGACCTCCCTACTGAACCACGGTGGGGAGTTTCTCAGTCTCTTAGGTGTAGTCCAAGGGATGTGGGGGGTGGGTGGTAACTTTAAAGTATAAATTCCGGAATACGTTCCAAGCCGTTTCGATTGATGACTCTGGGTCTAATTTCCAATCTACTAATGATGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD083021             [                                                                                                                                                                                                                                                                                            GGCATTCTATGGATTCCCTAACGATTTTCTCTTCGTACAGCTTTCTGGCCTTACGGAGGGTCGAGGCACAGGTATTTCGAGCCTTTTGATACTGAGATTTTGCCTCGTCAGTCCCCAGTAACCTAAATCTATCCCACATTTTCCTTCTTTTACGGAGAAGGATGCGAACCTCCCTACTGAACCACGGTGGGGAGTTTCTCGGTCTCTTAGGTGTAGTCCAAGGGATGTGGG    GGGCGGTAACTTTTAAGTATGAATCCCGGAATATGCCCCAAGCCGTTTCGATTGATGACTCTGGGTCTATTTTCCAATCTACTGATGATGCTGATTTCATGATGTCTGGTATGTTTGCTTTCTAGACGTTAGGTCTGGATTGAGCTGAGACGTGCTCGTGATCGACAGTTATATGGAAGTCAAAGCTTGAAACTGCATGATCACTTTTGCCTAGGGGTGGCATGTAATCCAGGTTTGCAACGTCATCCTCATAACGAGTCAATATAAGATCTAGTAAGGATGATGCAGAACCCGGGTCGTACCTAGTTGCTTCCTTCACGTGTTGCACTANGGCACATGTGATTACCGCATCAACT                                                                                                                                                                                                                                                          ]
[+] EMBL CD199374             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TTGCTTCCTTCACGTGTTGCACTAGGGCACATGTGATTACCGCATCAACTAGTTCCTGTTCGAAGGAATTTGCTGACTGCGATAGATCAAACTAAGCAGCAACTCTTGTCCCCTACATTTCAGGCGGCAGCTAACATTCATACGTCCCACTCTCATGGGATACACTGTCGATAATAGTGAATGGAATAGCATTCCTAATGAATAGAGCTACTCCCCCTCCTTTGCGCGTTTGTATTCTATCGGCCCTTACTAATGTAAAACCCTCGAAGTCAAGTTCCCTACTATCTATAGACGGCGTCA]
[+] EMBL CD199391             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TTCCTTCACGTGTTGCACTAGGGCACATGTGATTACCGCATCAACTAGTTCCTGTTCGAAGGAATTTGCTGACTGCGATAGATCAAACTAAGCAGCAACTCTTGTCCCCTACATTTCAGGCGGCAGCTAACATTCATACGTCCCACTCTCATGGGATACACTGTCGATAATAGTGAATGGAATAGCATTCCTAATGAATAGAGCTACTCCCCCTCCTTTGCGCGTTTGTATTCTATCGGCCCTTACTAATGTAAAACCCTCGAAATCAAGTTCCCTACTATCTATAGACGGCGTCA]
[+] EMBL CD199413             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TTCCTTCACGTGTTGCACTAGGGCACATGTGACTACCGCATCAACTAGTTCCTGTTCGAAGGAATTTGCTGACTGCGATAGATCAAACTAAGCAGCAACTCTTGTCCCCTACATTTCAGGCGGCAGCTAACATTCATACGTCCCACTCTCATGGGATACACTGTCGATAATAGTGAATGGAATAGCATTCCTAATGAATAGAGCTACTCCCCCTCCTTTGCGCGTTTGTATTCTATCGGCCCTTACTAATGTAAAACCCTCGAAATCAAGTTCCCTACTATCTATAGACGGCGTCA]
[+] EMBL CD199449             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TTCCTTCACGTGTTGCACTAGGGCACATGTGATTACCGCATCAACTAGTTCCTGTTCGAAGGAATTTGCTGACTGCGATAGATCAAACTAAGCAGCAACTCTTGTCCCCTACATTTCAGGCGGCAGCTAAAATTCATACGTCCCACCCTCATGGG                                                                                                                                             ]




>consensus_10718#0
CAGTTCATCGGGTCCAGTGGATTCACCTATGTCAAGCTTAACTAGCAGACCAAAGACATC
GAGTTCTTTAATGGTCACGCTGTCCAGTGCTTGTGTGGGGGGATTTTCATGGACTGGTGA
GAAGGGTGTTTCTATGGTGTATACATCGCCAAAGTATTTAGAGAATACTTGAGCTTCGCC
AAAGTCGTCCTCCACTAGTGATGTGGCAGTACTGTCTCCTCATAGCGAAGGAACATTTCT
TCTTCTTTTTGTCCTTTGGTTTATATACGAATACAAGCGTTTAGGGCATTCTATGGATTC
CCTAACGATTTTCTCTTCGTACAGCTTTCTGGCCTTACGGAGGGTCGAGGCACAGGTATT
TCGAGCCTTTTGATACTGAGATTTTGCCTCGTCAGTCCCCAGTAACCTAAATCTATCCCA
CATTTTCCTTCTTTTACGGAGAAGGATGCGAACCTCCCTACTGAACCACGGTGGGGAGTT
TCTCGGTCTCTTAGGTGTAGTCCAAGGGATGTGGGGGGTGGTAACTTTAAAGTATAAATT
CCGGAATACGTTCCAAGCCGTTTCGATTGATGACTCTGGGTCTAATTTCCAATCTACTAA
TGATGCTGATTTCATGATGTCTGGTATGTTTGCTTTCTAGACGTTAGGTCTGGATTGAGC
TGAGACGTGCTCGTGATCGACAGTTATATGGAAGTCAAAGCTTGAAACTGCATGATCACT
TTTGCCTAGGGGTGGCATGTAATCCAGGTTTGCAACGTCATCCTCATAACGAGTCAATAT
AAGATCTAGTAAGGATGATGCAGAACCCGGGTCGTACCTAGTTGCTTCCTTCACGTGTTG
CACTAGGGCACATGTGATTACCGCATCAACTAGTTCCTGTTCGAAGGAATTTGCTGACTG
CGATAGATCAAACTAAGCAGCAACTCTTGTCCCCTACATTTCAGGCGGCAGCTAACATTC
ATACGTCCCACTCTCATGGGATACACTGTCGATAATAGTGAATGGAATAGCATTCCTAAT
GAATAGAGCTACTCCCCCTCCTTTGCGCGTTTGTATTCTATCGGCCCTTACTAATGTAAA
ACCCTCGAAATCAAGTTCCCTACTATCTATAGACGGCGTCA

consensusID : consensus_10718#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 539
fasta sequence

                              [GGAACCATTGAAGAAGAATGTGATTTTGATTGTGWACAAATTTGATTTTACATTGTATAATATAATCTTAAAATAATGCAC-ATTTGTGTTCTCATTGTGTTAATCGGTAGATAGTGAATGTGGGCAGCTTAGAGCGTACTAGTTAAAGTCTGACCACTGTGTAAGTTCAGTGAAGTGTACGAGTTGCTCGGTTGTGTAGCTGTGGTAATTGTACTAATTGATGATTCCTTCGTACGTGATTGCGCTCTGATCACGAATTGCGAATATAATACGTTCATTTGTGCTCACCTAGTTCTGACTTAACTGCGCCTGTAGCTCTTCTAGAGTTACTGCCGGTCCCAAGCCCGAGTAAAGGAGGCGGGTTGGGCATGAGGTTAGCGACCCCATCCCGTAGAAAAGCTAACTCGCT-AAAAAACGCTAATCAGAAAAATTAATTCAAACCATTTAAACTCTGCCTTGGGAGTTGAATGAATATTTATGACGTCTCATGATGAAAGCCGAAATTCTTCGGAAGTCACGAGACCGATGCACCTTCTAAC]

[-] EMBL BE519417             [GGAACCATTGAAGAAGAATGTGATTTTGATTGTGWACAAATTTGATTTTACATTGTATAATATAATCTTAAAATAATGCAC ATTTGTGTTCTCATTGTGTTAATCGGTAGATAGTGAATGTGGGCAGCTTAGAGCGTACTAGTTAAAGTCTGACCACTGTGTAAGTTCAGTGAAGTGTACGAGTTGCTCGGTTGTGTAGCTGTGGTAATTGTACTAATTGATGATTCCTTCGTACGTGATTGCGCTCTGATCACGAATTGCGAATATAATACGTTCATTTGTGCTCACCTAGTTCTG                                                                                                                                                                                                                                                   ]
[-] EMBL BE519413             [                                                                    mgAAATAATGCSCAATTTGTGTCCCAATTGTGTTAACGGGTAGATAGTGAATGTGGGKACCTWAGACCGTACTAGTTAAAGTCTGACCACTGTGTAAGTTCAGTGAAGTGTACGAGTTGCTCGGTTGTGTAGCTGTGGTAATTGTACTAATTGATGATTCCTTCGTACGTGATTGCGCTCTGATCACGAATTGCGAATATAATACGTTCATTTGTGCTCACCTAGTTCT                                                                                                                                                                                                                                                    ]
[+] EMBL CD127204             [                                                                                                                          GGGCAGCTTAGAGCGTACTAGTTAAAGTCTGACCACTGTGTTAGTTCAGTGAAGTGTACGAGTTGCTCGGTTGTGTAGCTGTGGTAATTGTACTAATTGATGATTCCTTCGTACGTGATTGCGCTCTGATCACGAATTGCGAATATAATACGTTCATTTGTGCTCACCTAGTTCTGACTTAACTGCGCCTGTAGCTCTTCTAGAGTTACTGCCGGTCCCAAGCCCGAGTAAAGGAGGCGGGTTGGGCATGAGGTTAGCGACCCCATCCCGTAGAAAAGCTAACTCGCT AAAAAACGCTAATCAGAAAAATTAATTCAAACCATTTAAACTCTGCCTTGGGAGTTGAATGAATATTTATGACGTCTCATGATGAAAGCCGAAATTCTTCGGAAGTCACGAGACCGATGCACCTTCTAAC]
[+] EMBL CD127117             [                                                                                                                          GGGCAGCTTAAAGCGTACTAGTTAAAGTCTGACCACTGTGTAAGTTCAGTGAAGTGTACGAGTTGCTCGGTTGTGTAGCTGTGGTAATTGTACTAATTGATGATTCCTTCGTACGTGATTGCGCTCTGATCACGAATTGCGAATATAATACGTTCATTTGTGCTCACCTAGTTCTGACTTAACTGCGCCTGTAGCTCTTCTAGAGTTACTGCCGGTCCCAAGCCCGAGTAACGGAGGAGGGTTGGGCATGAGGTTAGCGACCCCATCCCGTAGAAAAGCTAACTCGCTAAAAAAACGCTAATCAGAAAAATTAATTCAAACCATTTAAACTCTGCCTTGGGAGTTGAATGAATATTTATGACGTCTCATGATGAAAGCCGAAATTCTTCGGAAGTCACGAGACCGATGCACCTT     ]




>consensus_10718#1
GGAACCATTGAAGAAGAATGTGATTTTGATTGTGWACAAATTTGATTTTACATTGTATAA
TATAATCTTAAAATAATGCACATTTGTGTTCTCATTGTGTTAATCGGTAGATAGTGAATG
TGGGCAGCTTAGAGCGTACTAGTTAAAGTCTGACCACTGTGTAAGTTCAGTGAAGTGTAC
GAGTTGCTCGGTTGTGTAGCTGTGGTAATTGTACTAATTGATGATTCCTTCGTACGTGAT
TGCGCTCTGATCACGAATTGCGAATATAATACGTTCATTTGTGCTCACCTAGTTCTGACT
TAACTGCGCCTGTAGCTCTTCTAGAGTTACTGCCGGTCCCAAGCCCGAGTAAAGGAGGCG
GGTTGGGCATGAGGTTAGCGACCCCATCCCGTAGAAAAGCTAACTCGCTAAAAAACGCTA
ATCAGAAAAATTAATTCAAACCATTTAAACTCTGCCTTGGGAGTTGAATGAATATTTATG
ACGTCTCATGATGAAAGCCGAAATTCTTCGGAAGTCACGAGACCGATGCACCTTCTAAC

consensusID : consensus_10718#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 539
fasta sequence

                              [TAGTCTGGATTAATTAGGCTTCAAATTCGCTAGACTACCTAGTCTATATATACTAAGGTGACTCCGGAGATATATTGAGGCATAAGGTGATTAAGTAGCTGTTTTATCACCACAATGTCATGCTCAAAACGAGATTTCGGTTCCGAGCTTTCAATCTCCGTGGTTCTGTGAGAAATAAATGATCTGTTACTGTGATCAGTCTTCAATTTTTAGACTACTTTTATGGGGGCAGAGTTCCTTTTACATCGTTATGTCGCTTTCCCCTTACAAAATGTAACCATTCGTCTGTTGATTATGTCAGGTGTCGAGATGGTCGATGTAGTTGACTTGAGTTTCCTACTTATGAGTAATTGTGAGGTGATAGTGTGTGGAT----TGATGGTATTGGATCAGTTTGAATGATGCTAGATAACAGTGTTGAGTAATGATTTTCACCAAGATCTCTGAGGAACAGTCCTAATGATTGTTTTTGTTTGACAGGTGATAGTGTGTGGATTGATGGTATTGGATCAGGAAGCGAGAGGGAGAGAGAGATTGAGTAG]

[+] EMBL CD156495             [TAGTCTGGATTAATTAGGCTTCAAATTCGCTAGACTACCTAGTCTATATATACTAAGGTGACTCCGGAGATATATTGAGGCATAAGGTGATTAAGTAGCTGTTTTATCACCACAATGTCATGCTCAAAACGAGATTTCGGTTCCGAGCTTTCAATCTCCGTGGTTCTGTGAGAAATAAATGATCTGTTACTGTGATCAGTCTTCAATTTTTAGACTACTTTTATGGGGGCAGAGTTCCTTTTACATCGTTATGTCGCTTTCCCCTTACAAAATGTAACCATTCGTCTGCTGATTATGTCAGGTGTCGAGATGGTCGATGTAGTTGACTTGAGTTTCCTACTTATGAGTAATTGTGAGGTGATAGTGTGTGGAT    TGATGGTATTGGATCAG                                                                                                                                                     ]
[+] EMBL CD156252             [TAGTCTGGATTAATTAGGCTTCAAATTCGCTAGACTACCTAGTCTATATATACTAAGGTGACTCCGGAGATATATTGAGGCATAAGGTGATTAAGTAGCTGTTTTATCACCACAATGTCATGCTCAAAACGAGATTTCGGTTCCGAGCTTTCAATCTCCGTGGTTCTGTGAGAAATAAATGATCTGTTACTGTGATCAGTCTTCTATTTTTAGACTACTTTTATGGGGGCAGAGTTCCTTTTACATCGTTATGTCGCTTTCCCCTTACAAAATGTAACCATTCGTCTGTTGATTATGTCAGGTGTCGAGATGGTCGATGTAGTTGACTTGAGTTTCCTACTTATGAGTAATTGTGAGGTGATAGTGTGTGGAT    TGATGGTATTGGATCAG                                                                                                                                                     ]
[+] EMBL CD156058             [TAGTCTGGATTAATTAGGCTTCAAATTCGCTAGACTACCTAGTCTATATATACTAAGGTGACTCCGGAGATATATTGAGGCATAAGGTGATTAAGTAGCTGTTTTATCACCACAATGTCATGCTCAAAACGAGATTTCGGTTCCGAGCTTTCAATCTCCGTGGTTCTGTGAGAAATAAATGATCTGTTACTGTGATCAGTCTTCAATTTTTAGACTACTTTTATGGGGGCAGAGTTCCTTTTACATCGTTATGTCGCTTTCCCCTTACAAAATGTAACCATTCGTCTGTTGATTATGTCAGGTGTCGAGATGGTCGATGTAGTTGACTTGAGTTTCCTACTTATGAGTAATTGTGAGGTGATAGTGTGTGGAT    TGATGGTATTGGATCAG                                                                                                                                                     ]
[+] EMBL CD153324             [                                      CTAGTCTATATATACTAAGGTGACTCCGGAGATATATTGAGGCATAAGGTGATTAAGTAGCTGTTTTATCACCACAATGTCATGCTCAAAACGAGATTTCGGTTCCGAGCTTTCAATCTCCGTGGTTCTGTGAGAAATAAATGATCTGTTACTGTGATCAGTCTTCAATTTTTAGACTACTTTTATGGGGGCAGAGTTCCTTTTACATCGTTATGTCGCTTTCCCCTTACAAAATGTAACCATTCGTCTGTTGATTATGTCAGGTGTCGAGATGGTCGATGTAGTTGACTTGAGTTTCCTACTTATGAGTAATTGTGAGGTG  AGTCTGTCAATTTTCTGATGGTGGTGGTTTAGTTTGAATGATGCTAGATAACAGTGTTGAGTAATGATTTTCACCAAGATCTCTGAGGAACAGTCCTAATGATTGTTTTTGTTTGACAGGTGATAGTGTGTGGATTGATGGTATTGGATCAGGAAGCGAGAGGGAGAGAGAGATTGAGTAG]
[+] EMBL CD153472             [                                      CTAGTCTATATATACTAAGGTGACTCCGGAGACATATTGAGGCATAAGGTGATTAAGTAGCTGTTTTATCACCACAATGTCATGCTCAAAACGAGATTTCGGTTCCGAGCTTTCAATCTCCGTGGTTCTGTGAGAAATAAATGATCTGTTACTGTGATCAGTCTTCAATTTTTAGACTACTTTTATGGGGGCAGAGTTCCTTTTACATCGTTATGTCGCTTTCCCCTTACAAAATGTAACCATTCGTCTGTTGATTATGTCAGGTGTCGAGATGGTCGATGTAGTTGACTTGAGTTTCCTACTTATGAGTAATTGTGAGGTG  AGTCTGTCAATTTTCTGATGGTGGTGGTTTAGTTTGAATGATGCTAGATAACAGTGTTGAGTAATGATTTTCACCAAGATCTCTGAGGAACAGTCCTAATGATTGTTTTTGTTTGACAGGTGATAGTGTGTG                                                 ]
[+] EMBL CD153459             [                                      CTAGTCTATATATACTAAGGTGACTCCGGAGATATATTGAGGCATAAGGTGATTAAGTAGCTGTTTTATCACCACAATGTCATGCTCAAAACGAGATTTCGGTTCCGAGCTTTCAATCTCCGTGGCTCTGTGAGAAATAAATGATCTGTTACTGTGATCAGTCTTCAATTTTTAGACTACTTTCATGGGGGCAGAGTTCCTTTTACATCGTTATGTCGCTTTCCCCTTACAAAATGTAACCATTCGTCTGTTGATTATGTCAGGTGTCGAGATGG                                                                                                                                                                                                                                      ]
[+] EMBL CD065141             [                                                                                                                                                                      TGTGAGAAATAAATGATCTGTTACTGTGATCAGTCTTCAATATTTAGACTACTTTTATGGGGGCAGAGTTCCTTTTACATCGTTATGTCGCTTTCCCCTTACAAAATGTAACCATTCGCCTGTTGATTATGTCAGGTGTCGAGATGGTCGATGTAGTTGACTTGAGTTTCCTACTTATGAGTAATTGTGAG                                                                                                                                                                                          ]




>consensus_10718#2
TAGTCTGGATTAATTAGGCTTCAAATTCGCTAGACTACCTAGTCTATATATACTAAGGTG
ACTCCGGAGATATATTGAGGCATAAGGTGATTAAGTAGCTGTTTTATCACCACAATGTCA
TGCTCAAAACGAGATTTCGGTTCCGAGCTTTCAATCTCCGTGGTTCTGTGAGAAATAAAT
GATCTGTTACTGTGATCAGTCTTCAATTTTTAGACTACTTTTATGGGGGCAGAGTTCCTT
TTACATCGTTATGTCGCTTTCCCCTTACAAAATGTAACCATTCGTCTGTTGATTATGTCA
GGTGTCGAGATGGTCGATGTAGTTGACTTGAGTTTCCTACTTATGAGTAATTGTGAGGTG
ATAGTGTGTGGATTGATGGTATTGGATCAGTTTGAATGATGCTAGATAACAGTGTTGAGT
AATGATTTTCACCAAGATCTCTGAGGAACAGTCCTAATGATTGTTTTTGTTTGACAGGTG
ATAGTGTGTGGATTGATGGTATTGGATCAGGAAGCGAGAGGGAGAGAGAGATTGAGTAG

consensusID : consensus_10718#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 367
fasta sequence

                              [CCACGAGGGCCANAATTCGGCACGAGGCAAATCGTTGTTTTGGAACTTCGATTTTGCGCGTATCTCAATCGGGTCATTTGGACGCTTTGATAGAATTAACACTAACCTAAAATTCAGTGGTCCGCAAATGTGTTTTTCATCAAAAACGCGTTGACTTCAGCTTGAACTGGAAGTAATCGAAATCATGGTCACTCATCAATTTGCCATAATAATGACGATTTAGGATGATAATGATGATTATGATAAAGTATATGAGACTGATGAATATTATCATGATAATGTCGATGATGTTGATGTTGTGAATGATGATGTTAATAATAATAATTGTATTATTTATGATAATAATTTGTTTAATCTAACTAATCGT]

[+] EMBL CD079702             [CCACGAGGGCCANAATTCGGCACGAGGCAAATCGTTGTTTTGGAACTTCGATTTTGCGCGTATCTCAATCGGGTCATTTGGACGCTTTGATAGAATTAACACTAACCTAAAATTCAGTGGTCCGCAAATGTGTTTTTCATCAAAAACGCGTTGACTTCAGCTTGAACTGGAAGTAATCGAAATCATGGTCACTCATCAATTTGCCATAATAATGACGATTTAGGATGATAATGATGATTATGATAAAGTATATGAGACTGATGAATATTATCATGATAATGTCGATGATGTTGATGTTGTGAATGATGATGTTAATAATAATAATTGTATTATTTATGATAATAATTTGTTTAATCTAACTAATCG ]
[-] EMBL CD073961             [                            AAATCGTTGTTTTGGAACTTCGATTTTGCGCGTATCTCAATCGGGTCATTTGGACGCTTTGATAGAATTAACACTAACCTAAAATTCAGTGGTCCGCAAATGTGTTTTTCATCAAAAACGCGTTGACTTCAGCTTGAACTGGAAGTAATCGAAATCATGGTCACTCATCAATTTGCCATAATAATGACGATTTAGGATGATAATGATGATTATGATAAAGTATATGAGACTGATGAATATTATCATGATAATGTCGATGATGTTGATGTTGTGAATGATGATGTTAATAATAATAATTGTATTATTTATGATAATAATTTGTTTAATCTAACTAATCGT]




>consensus_10718#3
CCACGAGGGCCANAATTCGGCACGAGGCAAATCGTTGTTTTGGAACTTCGATTTTGCGCG
TATCTCAATCGGGTCATTTGGACGCTTTGATAGAATTAACACTAACCTAAAATTCAGTGG
TCCGCAAATGTGTTTTTCATCAAAAACGCGTTGACTTCAGCTTGAACTGGAAGTAATCGA
AATCATGGTCACTCATCAATTTGCCATAATAATGACGATTTAGGATGATAATGATGATTA
TGATAAAGTATATGAGACTGATGAATATTATCATGATAATGTCGATGATGTTGATGTTGT
GAATGATGATGTTAATAATAATAATTGTATTATTTATGATAATAATTTGTTTAATCTAAC
TAATCGT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10718#1      ------------------------------------------------------------
consensus_10718#3      ------------------------------------------------------------
consensus_10718#2      ------------------------------------------------------------
consensus_10718#0      CAGTTCATCGGGTCCAGTGGATTCACCTATGTCAAGCTTAACTAGCAGACCAAAGACATC 60
                                                                                   

consensus_10718#1      ------------------------------------------------------------
consensus_10718#3      ------------------------------------------------------------
consensus_10718#2      ------------------------------------------------------------
consensus_10718#0      GAGTTCTTTAATGGTCACGCTGTCCAGTGCTTGTGTGGGGGGATTTTCATGGACTGGTGA 120
                                                                                   

consensus_10718#1      ------------------------------------------------------------
consensus_10718#3      ------------------------------------------------------------
consensus_10718#2      ------------------------------------------------------------
consensus_10718#0      GAAGGGTGTTTCTATGGTGTATACATCGCCAAAGTATTTAGAGAATACTTGAGCTTCGCC 180
                                                                                   

consensus_10718#1      ------------------------------------------------------------
consensus_10718#3      ------------------------------------------------------------
consensus_10718#2      ------------------------------------------------------------
consensus_10718#0      AAAGTCGTCCTCCACTAGTGATGTGGCAGTACTGTCTCCTCATAGCGAAGGAACATTTCT 240
                                                                                   

consensus_10718#1      ------------------------------------------------------------
consensus_10718#3      ------------------------------------------------------------
consensus_10718#2      ------------------------------------------------------------
consensus_10718#0      TCTTCTTTTTGTCCTTTGGTTTATATACGAATACAAGCGTTTAGGGCATTCTATGGATTC 300
                                                                                   

consensus_10718#1      ------------------------------------------------------------
consensus_10718#3      ------------------------------------------------------------
consensus_10718#2      ------------------------------------------------------------
consensus_10718#0      CCTAACGATTTTCTCTTCGTACAGCTTTCTGGCCTTACGGAGGGTCGAGGCACAGGTATT 360
                                                                                   

consensus_10718#1      ------------------------------------------------------------
consensus_10718#3      ------------------------------------------------------------
consensus_10718#2      ------------------------------------------------------------
consensus_10718#0      TCGAGCCTTTTGATACTGAGATTTTGCCTCGTCAGTCCCCAGTAACCTAAATCTATCCCA 420
                                                                                   

consensus_10718#1      ------------------------------------------------------------
consensus_10718#3      ------------------------------------------------------------
consensus_10718#2      ------------------------------------------------------------
consensus_10718#0      CATTTTCCTTCTTTTACGGAGAAGGATGCGAACCTCCCTACTGAACCACGGTGGGGAGTT 480
                                                                                   

consensus_10718#1      ----GGAACCATTGAAGAAGAATGTGATTTTGATTGTGWACAAATTTGATTTTACATTGT 56
consensus_10718#3      ------------------------------------------------------------
consensus_10718#2      --------TAGTCTGGATTAATTAGGCTTCAAATTCGCTAGACTACCTAGTCTATATATA 52
consensus_10718#0      TCTCGGTCTCTTAGGTGTAGTCCAAGGGATGTGGGGGGTGGTAACTTTAAAGTATAAATT 540
                                                                                   

consensus_10718#1      ATAATATAATCTTAAAATAATGCACATTTGTGT-TCTCATTGTGTTAATCGGTAGATAGT 115
consensus_10718#3      ------------------------------------------------------------
consensus_10718#2      CTAAGGTGACTCCGGAGATATATTGAGGCATAA-GGTGATTAAGT-AGCTGTTTTATCAC 110
consensus_10718#0      CCGGAATACGTTCCAAGCCGTTTCGATTGATGACTCTGGGTCTAATTTCCAATCTACTAA 600
                                                                                   

consensus_10718#1      GAATGTGGGCAGCTTAGAGCGTACTAG--TTAAAGTCTGACCACT--GTGTAAGTTCAGT 171
consensus_10718#3      ------------------CCACGAGGG--CCANAATTCGGC-ACG--AGGCAAATC---- 33
consensus_10718#2      CACAATGTCATGCTCAAAACGAGAT----TTCGGTTCCGA--GCT--TTCAATCTCCGTG 162
consensus_10718#0      TGATGCTGATTTCATGATGTCTGGTATGTTTGCTTTCTAGACGTTAGGTCTGGATTGAGC 660
                                                          *                  *     

consensus_10718#1      ---GAAGTGTACGAGTTGCTCGGTTGTGTAGCTGTGGTAATTGTACTAATTGATGATTCC 228
consensus_10718#3      ---GTTGTTTTGGAACT--TCGATTTTGCGCGTATCTCAATCGGGTCATTTG--GACGCT 86
consensus_10718#2      ---GTTCTGTGAGAAATAAATGATC-TGTTACTGTGATCAGTCTTCAATTTTTAGACTAC 218
consensus_10718#0      TGAGACGTGCTCGTGATCGACAGTTATATGGAAGTCA-AAGCTTGAAACTGCATGATCAC 719
                          *   *    *   *      *  *       *    *       * *    **    

consensus_10718#1      TTCGTACGTGATTGCGCTCTGATCACGA-ATTGCGAATATAATA-CGTTC--ATTTGTGC 284
consensus_10718#3      TTGATA---GAATTAACACTAACCTAAA-ATTCAGTGGTCCGCA-AATGT--GTTTTTCA 139
consensus_10718#2      TTTTATGGGGGCAGAGTTCCTTTTACATCGTTATGTCGCTTTCC-CCTTACAAAATGTAA 277
consensus_10718#0      TTTTGCCTAGGGGTGGCATGTAATCCAGGTTTGCAACGTCATCCTCATAACGAGTCAATA 779
                       **       *                    **               *            

consensus_10718#1      TCACCTA-GTTCTGACTT-AACTGCGCCTGTAGCTCTTCTAG--AGTTACTGCCGGTCCC 340
consensus_10718#3      TCAAAAACGCGTTGACTTCAGCTTGAACTGGAAGTAATCGAA--A-TCATGGTCACTCAT 196
consensus_10718#2      CCATTCGTCTGTTGATTA-TGTCAGGTGTCGAGATGGTCGATGTAGTTGACTTGAGTTTC 336
consensus_10718#0      TAAGATCTAGTAAGGATGATGCAGAACCCGGGTCGTACCTAGTTGCTTCCTTCACGTGTT 839
                         *          *  *                     * *     *         *   

consensus_10718#1      AAGCCCGAGT-AAAGGAGGCGGGTTGGGCATG-AGGTTAGCGACCCCATCCCGTAGAAAA 398
consensus_10718#3      CAATTTGCCA-TAATAATGACGATTTAGGATG-ATAATGATGATTATG------ATAAAG 248
consensus_10718#2      CTACTTATGAGTAATTGTGAGGTGATAGTGTGTGGATTGATGGTATTGGATCAGTTTGAA 396
consensus_10718#0      GCACTAGGGC----ACATGTGATTACCGCATC--AACTAGTTCCTGTTCGAAGGAATTTG 893
                                         *        *  *      *                      

consensus_10718#1      GCTAACTCGCTAAAAAACGCTAATCAGAAAAATTAATTCAAACCATTTAAACTCTGCCTT 458
consensus_10718#3      TATATGAGACTGATGAATATTA-TCATGATAAT--GTCGATGATGTTGATGTTGTGAATG 305
consensus_10718#2      TGATGCTAGATAAC-AGTGTTGAGTAATGATTTTCACCAAGATCTCTGAGGAACAGTCCT 455
consensus_10718#0      CTGACTGCGATAGATCAAACTAAGCAGCAACTCTTGTCCCCTACATTTCAGGCGGCAGCT 953
                                 *         *    *                    *             

consensus_10718#1      GGGAGTTGAATGAATATTTATGACGTCTCATGATGAAAGCCGAAATTCTTCGG--AAGTC 516
consensus_10718#3      ATGATGTTAAT-AATAATAATTGTAT-TATTTATGATAAT---AATTTGTTTA--ATCTA 358
consensus_10718#2      AATGATTGTTT--TTGTTTGACAGGTGATAGTGTGTGGATTGATGGTATTGGATCAGGAA 513
consensus_10718#0      AACATTCATACGTCCCACTCTCATGGGATACACTGTCGATAATAGTGAATGGAATAGCAT 1013
                                                        **              *     *    

consensus_10718#1      ACGAGACCGATGCACCTTCTAAC------------------------------------- 539
consensus_10718#3      ACTA-ATCGT-------------------------------------------------- 367
consensus_10718#2      GCGAGAGGGAGAGAGAGATTGAGTAG---------------------------------- 539
consensus_10718#0      TCCTAATGAATAGAGCTACTCCCCCTCCTTTGCGCGTTTGTATTCTATCGGCCCTTACTA 1073
                        *   *                                                      

consensus_10718#1      ------------------------------------------------
consensus_10718#3      ------------------------------------------------
consensus_10718#2      ------------------------------------------------
consensus_10718#0      ATGTAAAACCCTCGAAATCAAGTTCCCTACTATCTATAGACGGCGTCA 1121