cluster # 10725

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Schistosoma mansoni
cluster # 10725 cluster # 10725 Sequences # 20 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10725#0 length = 975 sequences # 15
consensus_10725#1 length = 701 sequences # 2

consensus_10725#2 length = 592 sequences # 2
consensus_10725#3 length = 461 sequences # 1

consensusID : consensus_10725#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 15
consensus length = 975
fasta sequence

                              [AGATGTACTCCGTCATTCGTATTCGTTATGTTCACTCCTGACGTGTAATTTGCCGCGGCCTGTAATATTCAAAACAGTAACGTTTAACAATGATCAATTCA-GATGCTTTAG-AATCTGCAAAACAGATAGCTTGTCACTCAGCTATTTCTGATTGGCTTGAAGATAATCAGATTATTGGACTTGGAAGTGGTACAACAATTAAATACGCTGTAGAGTATATTGCTGAAAAAGTGAAAAAGGAAAACCTACAGATTCAGTGTATACCAACTTCATTTCAGGCCAGACAACTTCTGATCAACCATAAATTGCCAGTAACAGAACTTGATATATGTGAACAGATTGACGTAACTTTCGATGGGGCAGATGAAGTAGATGAACATCTACATTTAATCAAAGGCGGTGGTGGCTGTTTACTCCAGGAAAAAATTGTTGCTTCTTGTACTAACGATTTTATAGCTATTATCGATGAACGGAAACATTCAAAGAGGC-TAGGTTCATATTGGACTAAAGGCTTACCAATCGAGGTAGTTCCAATGGCTTTCAAACCGGTACAAACAAGAATACAAAAACTATTTGGTGGACAAGCGATTCTACGAGAGGCTGTTTCAAAGATGGGTCCAGTTGTAACAGATAATGGGAACTTTTTATTAGACTGGAAATTCGATACAAATAAACAATATTATTGGCCAGATGTAAATGTTCAACTATCACAAATACCTGGTATCGTTGATACTGGCCTGTTTATCAATATGACAAGTAGAATTTATATTGGTAATTTGAATGGTACAGTAACTAAATTGGAAGGAAAATCATCTAACCAACATAAATTGAACAATATGAATAATCTATAATCGATTATATTACCTATCTGCTTATTGATATACTTATCCTGTTTTGTTCTACTTCCACTCAGGGTTTATATTATTATTTTCTTATTGTATTATTTTGTTGCCTTTTCATAAATGCAAAGAGAAT]

[+] EMBL CD098083             [AGAT TACTCCGTCATTCGTATTCGTTATGTTCACTCCTGACGTGTAATTTGCCGCGGCCTGTAATATTCAAAACAGTAACGTTTAACAATGATCAATTCA GATGCTTTAG AATCTGCAAAACAGATAGCTTGTCACTCAGCTATTTCTGATTGGCTTGAAGATAATCAGATTATTGGACTTGGAAGTGGTACAACAATTAAATACGCTGTAGAGTATATTGCTGAAAAAGTGAAAAAGGAAAACCTACAGATTCAGTGTATACCATCTTCATTTCAGGCCAGACAACTTCTGATCAACCATAAATTGCCAGTAACAGAACTTGATATATGTGAACAGATTGACGTAACTTTCGATGGGGCAGATGAAGTAGATGAACATCTACATTTAATCAAAGGCGGTGGTGGCTGTTTACTCCAGGAAAAAATTGTTGCTTCTTGTACTAACGATGTTATAGCTATTATCGATGAACGGAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD097876             [AGATGTACTCCGTCATTCGTATTCGTTATGTTCACTCCTGACGTGTAATTTGCCGCGGCCTGTAATATTCAAAACAGTAACGTTTAACAATGATCAATTCA GATGCTTTAG AATCTGCAAAACAGATAGCTTGTCACTCAGCTATTTCTGATTGGCTTGAAGATAATCAGATTATTGGACTTGGAAATGGTACAACAATTAAATACGCTGTAGAGTATATTGCTGAAAAAGTGAAAAAGGAAAACCTACAGATTCAGTGTATACCAACTTCATTTCAGGCCAGACAACCTCTGATCAACCATAAATTGCCAGTAACAGAACTTGATATATGTGGACAGATTGACGTAACTTTCGATGGGGCAGATAAAGTAGATGAACATCTACATTTAATCAAAGGCGGTGGTGGCTGTTTACTCCAGGAAAAAATTGTTGCTTCTTGTACTAACGATTTTATAGCTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD187542             [AGATGTACTCCGTCATTCGTATTCGTTATGTTCACTCCTGACGTGTAATTTGCCGCGGCCTGTAATATTCAAAACAGTAACGTTTAACAATGATCAATTCA GATGCTTTAG AATCTGCAAAACAGATAGCTTGTCACTCAGCTATTTCTGATTGGCTTGAAGATCATCAGATTATTGGACTTGGAAGTGGTACAACAATTAAATACGCTGTAGAGTATATTGCTGAAAAAGTGAAAAAGGAAAACCTACAGATTCAGTGTATACCAACTTCATTTCAGGCCAGACAACTTCTGATCAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD161126             [ GATGTACTCCGTCATTCGTATTCGTTATGTTCACTCCTGACGTGTAATTTGCCGCGGCCTGTAATATTCAAAACAGTAACGTTTAACAATGATCAATTCA GATGCTTTAG AATCTGCAAAACAGATAGCTTGTCACTCAGCTATTTCTGATTGGCTTGAAGATAATCAGATTATTGGACTTGGAAGCGGTACAACAATTAAATACGCTGTAGAGTATATTGCTGAAAAAGTGAAAAAGGAAAACCTACAGATTCAGTGTATACCAACTTCATTTCAGGCCAGACAACTTCTGATCAACCATAAATTGCCAGTAACAGAACTTGATATATGTGAACAGATTGACGTAACTTTCGATGGGGCAGATGAAGTAGATGAACATCTACATTTAATCAAAGGCGGTGGTGGCTGTTTACTCCAGGAAGAAATTGTTGCTTCTTGTACTAACGATTTTATAGCTATTATCGATGAACGGAAACATTCAAAGAGGC TAGGTTCATATTGGACTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD132658             [ GATGTACTCCGTCATTCGTATTCGTTATGTTCACTCCTGACGTGTAATTTGCCGCGGCCTGTAATATTCAAAACAGTAACGTTTAACAATGATCAATTCA GATGCTTTAG AATCTGCAAAACAGATAGCTTGTCACTCAGCTATTTCTGATTGGCTTGAAGATAATCAGATTATTGGACTTGGAAGTGGTACAACAATTAAATACGCTGTAGAGTATATTGCTGAAAAAGTGAAAAAGGAAAACCTACAGATTCAGTGTATACCAACTTCATTTCAGGCCAGACAACTTCTGATCAACCATAAATTGCCAGTAACAGAACTTGATATATGTGAACAGATTGACGTAACTTTCGATGGGGCAGATGAAGTAGATGAACATCTACATTTAATCAAAGGCGGTGGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD111690             [             CATTCGTATTCGTTATGTTCACTCCTGACGTGTAGTTTGCCGCGGCCTGTAATATTCAAAACAGTAACGTTTAACAATGATCAATTCA GATGCTTTAG AATCTGCAAAACAGATAGCTTGTCACTCAGCTATTTCTGATTGGCTTGAAGATAATCAGATTATTGGACTTGGAAGTGGTACAACAATTAAATACGCTGTAGAGTATATTGCTGAAAAAGTGAAAAAGGAAAACCTACAGATTCAGTGTATACCAACTTCATTTCAGGCCAGACAACTTCTGATCAACCATAAATTGCCAGTAACAGAACTTGATATATGTGAACAGATTGACGTAACTTTCGATGGGGCAGATGAAGTAGATGAACATCTACATTTAATCAAAGGCGGTGGTGGCTGTTTACTCCAGGAAAAAATTGTTGCTTCTTGTACTAACGATTTTATAGCTATTATCGATGAACGGAAACATTCGAAGAGACGTAGGTTtagaaagac                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD083790             [                  acgaggGTTATGTTCACTCCTGACGTGT ATTTGCCGCGGCCTGTAATATTCAAAACAGTAACGTTTAACAATGATCAATTCA GATGCTTTAG AATCTGCAAAACAGATAGCTTGTCACTCAGCTATTTCTGATTGGCTTGAAGATAATCAGATTATTGGACTTGGAAGTGGTACAACAATTAAATACGCTGTAGAGTATATTGCTGAAAAAGTGAAAAAGGAAAACCTACAGATTCAGTGTATACCAACTTCATTTCAGGCCAGACAACTTCTGATCAACCATAAATTGCCAGTAACAGAACTTGATATATGTGAACAGATTGACGTAACTTTCGATGGGGCAGATGAAGTAGATGAACATCTACATTTAATCAAAGGCGGTGGTGGCTGTTTACTCCAGGAAAAAATTGTTGCTTCTTGTACTAACGATTTTATAGCTATTATCGATGAACGGAAACATTCAAAGAGGC TAGGTTCATATTGGACTAAAGGCTTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD083871             [                                     CTGACGTGTAATTCGCCGCGGCCTGTAATATTCAAAACAGTAACGTTTAACAATGATCAATTCATGATGCTTTAGCAATCTGCAAAACAGATAGCTTGTCACTCAGCTATTTCTGATTGGCTTGAAGATGATCAGATTATTGGACTTGGAAGTGGTACAACAATTAAATACGCTGTAGAGTATATTGCTGAAAAAGTGAAAAAGGAAAACCTACAGATTCAGTGTATACCAACTTCATTTCAGGCCAGACAACTTCTGATCAACCATAAATTGCCAGTAACAGAACTTGATATATGTGAACAGATTGACGTAACTTTCGATGGGGCAGATGAAGTAGATGAACATCTACATTTAATCAAAGGCGGTGGTGGCTGTTTACTCCAGGAAAAAATTGTTGCTTCTTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD133583             [                                                                                                                         AAACAGATAGCTTGTCACTCAGCTATTTCTGATTGGCTTGAAGATAATCAGATTATTGGACTTGGAAGTGGTACAACAATTAAATACGCTGTAGAGTATATTGCTGAAAAAGTGAAAAAGGAAAACCTACAGATTCAGTGTATACCAACTTCATTTCAGGCCAGACAACTTCTGATCAACCATAAATTGCCAGTAACAGAACTTGATATATGTGAACAGATTGACGTAACTTTCGATGGGGCAGATGAAGTAGATGAACATCTACATTTAATCAAAGGCGGTGGTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD097833             [                                                                                                                                                                                                                                                                                                                          TAACAGAACTTGATATATGTGAACAGATTGACGTAACTTTCGATGGGGCAGATGAAGTAGATGAACATCTACATTTAATCAAAGGCGGTGGTGGCTGTTTACTCCAGGAAAAAATTGTTGCTTCTTGTACTAACGATTTTATAGCTATTATCGATGAACGGAAACATTCAAAGAGGC TAGGTTCATATTGGACTAAAGGCTTACCAATCGAGGTAGTTCCAATGGCTTTCAAACCGGTACAAACAAGAATACAAAAACTATTTGGTGGACAAGCGATTCTACGAGAGGCTGTTTCAAAGATGGGTCCAGTTGTAACAGATAATGGGAACTTTTTATTAGACTGGAAATTCGATACAAATAAACAATATTATTGGCCAGATGTAAATGTTCAACTATCACAAATACCTGGTATCGTTGATACTGGCCTGTTTATCAATATGACAAGTAGAATTTATATTGGTAATT                                                                                                                                                                                                      ]
[-] EMBL CD098100             [                                                                                                                                                                                                                                                                                                                                   TTGATATATGTGAACAGATTGACGTAACTTTCGATGGGGCAGATGAAGTAGATGAACATCTACATTTAATCAAAGGCGGTGGTGGCTGTTTACTCCAGGAAAAAATTGTTGCTTCTTGTACTAACGATTTTATAGCTATNATCGATGAACGGAAACATTCAAAGAGGC TAGGTTCATATTGGACTAAAGGCTTACCAATCGAGGTAGTTCCAATGGCTTTCAAACCGGTACAAACAAGAATACAAAAACTATTTGGTGGACAAGCGATTCTACGAGAGGCTGTTTCAAAGATGGGTCCAGTTGTAACAGATAATGGGAACTTTTTATTAGACTGGAAATTCGATACAAATAAACAATATTATTGGCCAGATGTAAATGTTCAACTATCACAAATACCTGGTATCGTTGATACTGGCCTGTTTATCAATATGACAAGTAGAATTTATATTGGTAATT                                                                                                                                                                                                      ]
[+] EMBL CD078920             [                                                                                                                                                                                                                                                                                                                                                              CTTTCGATGGGGCAGATGAAGTAGATGAACATCTACATTTAATCAAAGGCGGTGGTGGCTGTTTACTCCAGGAAAAAATTGTTGCTTCTTGTACTAACGATTTTATAGCTATTATCGATGAACGGAAACATTCAAAGAGGC TAGGTTCATATTGGACTAAAGGCTTACCAATCGAGGTAGTTCCAATGGCTTTCAAACCGGTACAAACAAGAATACAAAAACTATTTGGTGGACAAGCGATTCTACGAGAGGCTGTTTCAAAGATGGGTCCAGTTGTAACAGATAATGGGAACTTTTTATTAGACTGGAAATTCGATACAAATAAACAATATTATTGGCCAGATGTAAATGTTCAACTATCACAAATACCTGGTATCGTTGATACTGGCCTGTTTATCAATATGACAAGTAGAATTTATATTGGTAATTTGAATGGTACAGTAACTAAATTGGAAGGAAAATCATCTAACCAACATAAATTGAACAATATGAATAATCTATAATCGATTATATTACCTATCTGCTTATTGATATACTTATCCTGTTTTGTTCTACTTCCACTCAGGGTTTATATTATTATTTTCTTATTGGATTATTNTGTTGCCTTTTCATANATGCAAAGAGAA ]
[-] EMBL CD073377             [                                                                                                                                                                                                                                                                                                                                                                                                          AAAGGCGGTGGTGGCTGTTTACTCCAGGAAAAAATTGTTGCTTCTTGTACTAACGATTTTATAGCTATTATCGATGAACGGAAACATTCAAAGAGGC TAGGTTCATATTGGACTAAAGGCTTACCAATCGAGGTAGTTCCAATGGCTTTCAAACCGGTACAAACAAGAATACAAAAACTATTTGGTGGACAAGCGATTCTACGAGAGGCTGTTTCAAAGATGGGTCCAGTTGTAACAGATAATGGGAACTTTTTATTAGACTGGAAATTCGATACAAATAAACAATATTATTGGCCAGATGTAAATGTTCAACTATCACAAATACCTGGTATCGTTGATACTGGCCTGTTTATCAATATGACAAGTAGAATTTATATTGGTAATTTGAATGGTACAGTAACTAAATTGGAAGGAAAATCATCTAACCAACATAAATTGAACAATATGAATAATCTATAATCGATTATATTACCTATCTGCTTATTGATATACTTATCCTGTTTTGTTCTACTTCCACTCAGGGTTTATATTATTATTTTCTTATTGTATTATTTTGTTGCCTTTTCATAAATGCAAAGAGAAT]
[-] EMBL CD073097             [                                                                                                                                                                                                                                                                                                                                                                                                           AAGGCGGTGGTGGCTGTTTACTCCAGGAAAAAATTGTTGCTTCTTGTACTAACGATTTTATAGCTATTATCGATGAACGGAAACATTCAAAGAGGC TAGGTTCATATTGGACTAAAGGCTTACCAATCGAGGTAGTTCCAATGGCTTTCAAACCGGTACAAACAAGAATACAAAAACTATTTGGTGGACAAGCGATTCTACGAGAGGCTGTTTCAAAGATGGGTCCAGTTGTAACAGATAATGGGAACTTTTTATTAGACTGGAAATTCGATACAAATAAACAATATTATTGGCCAGATGTAAATGTTCAACTATCACAAATACCTGGTATCGTTGATACTGGCCTGTTTATCAATATGACAAGTAGAATTTATATTGGTAATTTGAATGGTACAGTAACTAAATTGGAAGGAAAATCATCTAACCAACATAAATTGAACAATATGAATAATCTATAATCGATTATATTACCTATCTGCTTATTGATATACTTATCCTGTTTTGTTCTACTTCCACTCAGGGTTTATATTATTATTTTCTTATTGTATTATTTTGTTGCCTTTTCATAAATGCAAAGAGAAT]
[-] EMBL CD064189             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GTTCATATTGGACTAAAGGCTTACCAATCGAGGTAGTTCCAATGGCTTTCAAACCGGTACAAACAAGAATACAAAAACTATTTGGTGGAC AGCGATTCTACGAGA GCTGTTTCAAAGATGGGTCCAGTTGTAACAGATA                                                                                                                                                                                                                                                                                                                                                      ]




>consensus_10725#0
AGATGTACTCCGTCATTCGTATTCGTTATGTTCACTCCTGACGTGTAATTTGCCGCGGCC
TGTAATATTCAAAACAGTAACGTTTAACAATGATCAATTCAGATGCTTTAGAATCTGCAA
AACAGATAGCTTGTCACTCAGCTATTTCTGATTGGCTTGAAGATAATCAGATTATTGGAC
TTGGAAGTGGTACAACAATTAAATACGCTGTAGAGTATATTGCTGAAAAAGTGAAAAAGG
AAAACCTACAGATTCAGTGTATACCAACTTCATTTCAGGCCAGACAACTTCTGATCAACC
ATAAATTGCCAGTAACAGAACTTGATATATGTGAACAGATTGACGTAACTTTCGATGGGG
CAGATGAAGTAGATGAACATCTACATTTAATCAAAGGCGGTGGTGGCTGTTTACTCCAGG
AAAAAATTGTTGCTTCTTGTACTAACGATTTTATAGCTATTATCGATGAACGGAAACATT
CAAAGAGGCTAGGTTCATATTGGACTAAAGGCTTACCAATCGAGGTAGTTCCAATGGCTT
TCAAACCGGTACAAACAAGAATACAAAAACTATTTGGTGGACAAGCGATTCTACGAGAGG
CTGTTTCAAAGATGGGTCCAGTTGTAACAGATAATGGGAACTTTTTATTAGACTGGAAAT
TCGATACAAATAAACAATATTATTGGCCAGATGTAAATGTTCAACTATCACAAATACCTG
GTATCGTTGATACTGGCCTGTTTATCAATATGACAAGTAGAATTTATATTGGTAATTTGA
ATGGTACAGTAACTAAATTGGAAGGAAAATCATCTAACCAACATAAATTGAACAATATGA
ATAATCTATAATCGATTATATTACCTATCTGCTTATTGATATACTTATCCTGTTTTGTTC
TACTTCCACTCAGGGTTTATATTATTATTTTCTTATTGTATTATTTTGTTGCCTTTTCAT
AAATGCAAAGAGAAT

consensusID : consensus_10725#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 701
fasta sequence

                              [CCCCCCCCCCCCCCCCTCCNGGGGGGGGGAGGGGGCCCAAAATTTTTCGAGAAGTAGTTTTTTTTCGGTCAATCAAGTTAAATACCCCCAACAATTCATCAAAGGGGGGGGGGCGGTTCTTCCAGAAAATTTTGGTGATTAAAGAACTACCGTTTTATCGCTTTTACGATGGCCGGAAACATTCAAAGGGTTAGGTTCATATTGATTAAGGCTACCCAATGGAGGTAGTCCCATTGCTTTCAAACCGGTACAATCACGCATCCATATCTTATTTGGTGAACAAGCGATCCTACGAGAGGCTGTTTCAAAGATGGGTCCAGTTGTAACAGATAATGGGAACTTTTTATTAGACTGGAAATTCGATACAAATAACCAATATTATTGGCCAGATGTAAATGTTCAACTATCACAAATACCTGGTATCGTTGATACTGGCCTGTTTATCAATATGACAAGTAGAATTTATATTGGTAATTTGAATGGTACAGTAACTAAATTGGAAGGAAAATCATCTAACCAACATAAATTGAACAATATGAATAATCTATAATCGATTATATTACCTATCTGCTTATTGATATACTTATCCTGTTTTGTTCTACTTCCACTCAGGGTTTATATTATTATTTTCTTATTGTATTATTTTGTTGCCTTTTCATAAATGCAAAGAGAATTACTTTTGTAAAAAAAAAAAAAAAAAA]

[-] EMBL CD076892             [CCCCCCCCCCCCCCCCTCCNGGGGGGGGGAGGGGGCCCAAAATTTTTCGAGAAGTAGTTTTTTTTCGGTCAATCAAGTTAAATACCCCCAACAATTCATCAAAGGGGGGGGGGCGGTTCTTCCAGAAAATTTTGGTGATTAAAGAACTACCGTTTTATCGCTTTTACGATGGCCGGAAACATTCAAAGGGTTAGGTTCATATTGATTAAGGCTACCCAATGGAGGTAGTCCCATTGCTTTCAAACCGGTACAATCACGCATCCATATCTTATTTGGTGAACAAGCGATCCTACGAGAGGCTGTTTCAAAGATGGGTCCAGTTGTAACAGATAATGGGAACTTTTTATTAGACTGGAAATTCGATACAAATAACCAATATTATTGGCCAGATGTAAATGTTCAACTATCACAAATACCTGGTATCGTTGATACTGGCCTGTTTATCAATATGACAAGTAGAATTTATATTGGTAATTTGAATGGTACAGTAACTAAATTGGAAGGAAAATCATCTAACCAACATAAATTGAACAATATGAATAATCTATAATCGATTATATTACCTATCTGCTTATTGATATACTTATCCTGTTTTGTTCTACTTCCACTCAGGGTTTATATTATTATTTTCTTATTGTATTATTTTGTTGCCTTTTCATAAATGCAAAGAGAAT                           ]
[-] EMBL AI395834             [                                                                                                                                                                                                                                                                                                                      ATGGGTCCAGTTGTACCAGATAATGGAAACTTTTTATTAGACTGGAAATTCGATACAAATAAACAATATTATTGCCCAGATGTAAATGTTCAACTATCACAAATACCTGGTATCGTTGATACTGGCCTGTTTATCAATATGACAAGTAGAATTTATATTGGTAATTTGAATGGTACAGTAACTAAATTGGAAGGAAAATCATCTACCCAACATAAATTGAACAATATGAATAATCTATAATCGATTATATTACCTATCTGCTTATTGATATACTTATCCTATTTTGTTCTACTTCCACTCAGGGTTTATATTATTATTTTCTTATTGTATTATTTTGTTGCCTTTTCATAAATGCAAAGAGAATTACTTTTGTAAAAAAAAAAAAAAAAAA]




>consensus_10725#1
CCCCCCCCCCCCCCCCTCCNGGGGGGGGGAGGGGGCCCAAAATTTTTCGAGAAGTAGTTT
TTTTTCGGTCAATCAAGTTAAATACCCCCAACAATTCATCAAAGGGGGGGGGGCGGTTCT
TCCAGAAAATTTTGGTGATTAAAGAACTACCGTTTTATCGCTTTTACGATGGCCGGAAAC
ATTCAAAGGGTTAGGTTCATATTGATTAAGGCTACCCAATGGAGGTAGTCCCATTGCTTT
CAAACCGGTACAATCACGCATCCATATCTTATTTGGTGAACAAGCGATCCTACGAGAGGC
TGTTTCAAAGATGGGTCCAGTTGTAACAGATAATGGGAACTTTTTATTAGACTGGAAATT
CGATACAAATAACCAATATTATTGGCCAGATGTAAATGTTCAACTATCACAAATACCTGG
TATCGTTGATACTGGCCTGTTTATCAATATGACAAGTAGAATTTATATTGGTAATTTGAA
TGGTACAGTAACTAAATTGGAAGGAAAATCATCTAACCAACATAAATTGAACAATATGAA
TAATCTATAATCGATTATATTACCTATCTGCTTATTGATATACTTATCCTGTTTTGTTCT
ACTTCCACTCAGGGTTTATATTATTATTTTCTTATTGTATTATTTTGTTGCCTTTTCATA
AATGCAAAGAGAATTACTTTTGTAAAAAAAAAAAAAAAAAA

consensusID : consensus_10725#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 592
fasta sequence

                              [TGGGGTTTGAAACCAAATTATCGAGGTGCAGATACATCCGGCTAACGCGTCTCAAATGGAATGAGATGCACGTCCTGGATTTTACTGTTAGCTGCAATCCATTCATTTTAAATAAGATTCATAAGGTCTATGTTTTTCAAAGCATATGATGATATAATAAAACTACTCATTATCATATTTAAAAGAATCAATTGTCTTTTACAGGCCAGACAACTTCTGATCAACCATAAATTGCCAGTAACAGAACTTGATATATGTGAACAGATTGACGTAACTTTCGATGGGGCAGATGAAGTAGATGAACATCTACATTTAATCAAAGGCGGTGGTGGCTGTTTACTCCAGGAAAAAATTGTTGCTTCTTGTACTAACGATTTTATAGCTATTATCGATGAACGGAAACATTCAAAGAGGCTAGGTTCATATTGGACTAAAGGCTTACCAATCGAGGTAGTTCCAATGGCTTTCAAACCGGTACAAACAAGAATACAAAAACTATTTGGTGGACAAGCGATTCTACGAGAGGCTGTTTCAAGATGGGTCCAGTTGTAACAGATAATGGGAACTTTNTATTAGACTGGAAATTCGATAC]

[+] EMBL CD078633             [TGGGGTTTGAAACCAAATTATCGAGGTGCAGATACATCCGGCTAACGCGTCTCAAATGGAATGAGATGCACGTCCTGGATTTTACTGTTAGCTGCAATCCATTCATTTTAAATAAGATTCATAAGGTCTATGTTTTTCAAAGCATATGATGATATAATAAAACTACTCATTATCATATTTAAAAGAATCAATTGTCTTTTACAGGCCAGACAACTTCTGATCAACCATAAATTGCCAGTAACAGAACTTGATATATGTGAACAGATTGACGTAACTTTCGATGGGGCAGATGAAGTAGATGAACATCTACATTTAATCAAAGGCGGTGGTGGCTGTTTACTCCAGGAAAAAATTGTTGCTTCTTGTACTAACGATTTTATAGCTATTATCGATGAACGGAAACATTCAAAGAGGCTAGGTTCATATTGGACTAAAGGCTTACCAATCGAGGTAGTTCCAATGGCTTTCAAACCGGTACAAACAAGAATACAAAAACTATTTGGTGGACAAGCGATTCTACGAGAGGCTGTTTCAAGATGGGTCCAGTTGTAACAGATAATGGGAACTTTNTATTAGACTGGAAATTCGATAC]
[-] EMBL CD161115             [                                                                                                                                                                                                                                                                                                                                                      CAGGAAAAAATTGTTGCTTCTTGTAATAACGATTTTATAGCTATTATCGATGAACGGAAACATTCAAAGAGGCTAGGTTCATATTGGACTA                                                                                                                                                               ]




>consensus_10725#2
TGGGGTTTGAAACCAAATTATCGAGGTGCAGATACATCCGGCTAACGCGTCTCAAATGGA
ATGAGATGCACGTCCTGGATTTTACTGTTAGCTGCAATCCATTCATTTTAAATAAGATTC
ATAAGGTCTATGTTTTTCAAAGCATATGATGATATAATAAAACTACTCATTATCATATTT
AAAAGAATCAATTGTCTTTTACAGGCCAGACAACTTCTGATCAACCATAAATTGCCAGTA
ACAGAACTTGATATATGTGAACAGATTGACGTAACTTTCGATGGGGCAGATGAAGTAGAT
GAACATCTACATTTAATCAAAGGCGGTGGTGGCTGTTTACTCCAGGAAAAAATTGTTGCT
TCTTGTACTAACGATTTTATAGCTATTATCGATGAACGGAAACATTCAAAGAGGCTAGGT
TCATATTGGACTAAAGGCTTACCAATCGAGGTAGTTCCAATGGCTTTCAAACCGGTACAA
ACAAGAATACAAAAACTATTTGGTGGACAAGCGATTCTACGAGAGGCTGTTTCAAGATGG
GTCCAGTTGTAACAGATAATGGGAACTTTNTATTAGACTGGAAATTCGATAC

consensusID : consensus_10725#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 461
fasta sequence

                              [AGATGTACTCCGTCATTCGTATTCGTTATGTTCACTCCTGACGTGTAATTTGCCGCGGCCTGTAATATTCAAAACAGTAACGTTTAACAATGATCAATTCAGATGCTTTAGAATCTGCAAAACAGATAGCTTGTCACTCAGCTATTTCTGATTGGCTTGAAGTAGTTTACAATAATTTCCTCAAAAAAACTTTATCAATATTTTCTTATCAGGATAATCAGATTATTGGACTTGGAAGTGGTACAACAATTAAATACGCTGTAGAGTATATTGCTGAAAAAGTGAAAAAGGAAAACCTACAGATTCAGTGTATACCAACTTCATTTCAGGCCAGACAACTTCTGATCAACCATAAATTGCCAGTAACAGAACTTGATATATGTGAACAGATTGACGTAACTTTCGATGGGGCAGATGAAGTAGATGAACATCTACATTTAATCAAAGGCGGTGGTGGCTGT]

[+] EMBL CD184945             [AGATGTACTCCGTCATTCGTATTCGTTATGTTCACTCCTGACGTGTAATTTGCCGCGGCCTGTAATATTCAAAACAGTAACGTTTAACAATGATCAATTCAGATGCTTTAGAATCTGCAAAACAGATAGCTTGTCACTCAGCTATTTCTGATTGGCTTGAAGTAGTTTACAATAATTTCCTCAAAAAAACTTTATCAATATTTTCTTATCAGGATAATCAGATTATTGGACTTGGAAGTGGTACAACAATTAAATACGCTGTAGAGTATATTGCTGAAAAAGTGAAAAAGGAAAACCTACAGATTCAGTGTATACCAACTTCATTTCAGGCCAGACAACTTCTGATCAACCATAAATTGCCAGTAACAGAACTTGATATATGTGAACAGATTGACGTAACTTTCGATGGGGCAGATGAAGTAGATGAACATCTACATTTAATCAAAGGCGGTGGTGGCTGT]




>consensus_10725#3
AGATGTACTCCGTCATTCGTATTCGTTATGTTCACTCCTGACGTGTAATTTGCCGCGGCC
TGTAATATTCAAAACAGTAACGTTTAACAATGATCAATTCAGATGCTTTAGAATCTGCAA
AACAGATAGCTTGTCACTCAGCTATTTCTGATTGGCTTGAAGTAGTTTACAATAATTTCC
TCAAAAAAACTTTATCAATATTTTCTTATCAGGATAATCAGATTATTGGACTTGGAAGTG
GTACAACAATTAAATACGCTGTAGAGTATATTGCTGAAAAAGTGAAAAAGGAAAACCTAC
AGATTCAGTGTATACCAACTTCATTTCAGGCCAGACAACTTCTGATCAACCATAAATTGC
CAGTAACAGAACTTGATATATGTGAACAGATTGACGTAACTTTCGATGGGGCAGATGAAG
TAGATGAACATCTACATTTAATCAAAGGCGGTGGTGGCTGT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10725#0      AGATGTACTCCGTCATTCGTATTCGTTATGTTCACTCCTGACGTGTAATTTGCCGCGGCC 60
consensus_10725#3      AGATGTACTCCGTCATTCGTATTCGTTATGTTCACTCCTGACGTGTAATTTGCCGCGGCC 60
consensus_10725#2      -----------------------------------------------------TGGGGTT 7
consensus_10725#1      -----------------------CCCCCCCCCCCCCCCCTCCNGGGGGGGGGAGGGGGCC 37
                                                                             * **  

consensus_10725#0      TGTAATATTCAAAACAGTAACGTTTAACAA--TGATCAATTCAGATGCTTTAGAATCTGC 118
consensus_10725#3      TGTAATATTCAAAACAGTAACGTTTAACAA--TGATCAATTCAGATGCTTTAGAATCTGC 118
consensus_10725#2      TGAAA---CCAAATTATCGAGGTGCAGATA--CATCCGGCTAACGCGTCTCAAA-----T 57
consensus_10725#1      CAAAATTTTTCGAGAAGTAGTTTTTTTTCGGTCAATCAAGTTAAATACCCCCAACAATTC 97
                          **       *  *      *             *   * *          *      

consensus_10725#0      AAAACAGATAGCTTGTCACTCAGCTATTTCTGATTGGCTTGAAG---------------- 162
consensus_10725#3      AAAACAGATAGCTTGTCACTCAGCTATTTCTGATTGGCTTGAAGTAGTTTACAATAATTT 178
consensus_10725#2      GGAATGAGATGCACGTC--CTGGATTTTACTG-TTAGCT--------------------- 93
consensus_10725#1      ATCAAAGGGGGGGGGGC----GGTTCTTCCAGAAAATTTTGGTGA----TTAAAGAACTA 149
                          *      *   * *     * * ** * *      *                     

consensus_10725#0      -----------------------------------ATAATCAGATTATTGGACTTGGAAG 187
consensus_10725#3      CCTCAAAAAAACTTTATCAATATTTTCTTATCAGGATAATCAGATTATTGGACTTGGAAG 238
consensus_10725#2      -----------------------------------GCAATCCATTCATT----TTAAATA 114
consensus_10725#1      CCGTTTTATCGCTTTTACGATGGC------CGGAAACATTCAAAGGGTTAGGTTCATATT 203
                                                            * **      **    *   *  

consensus_10725#0      TGGTACAACAATTAAATACGCTGTAGAGTATATTGCTGAAAAAGTGAAAAAGGAAAACCT 247
consensus_10725#3      TGGTACAACAATTAAATACGCTGTAGAGTATATTGCTGAAAAAGTGAAAAAGGAAAACCT 298
consensus_10725#2      AGATTCATAAGGTCTATGTTTTTCAAAGCATAT-GATGATATAAT-AAAACTACTCATTA 172
consensus_10725#1      GATTAAGGCTACCCAATG-GAGGTAGT-CCCATTGCTTTCAAACCGGTACAATCACGCAT 261
                          *           **       *      ** * *   * *     *           

consensus_10725#0      ACAGATTCAGTGTATACCAACTTCATTT-CAGGCCAGACAACTTCT--GATCAA-CCATA 303
consensus_10725#3      ACAGATTCAGTGTATACCAACTTCATTT-CAGGCCAGACAACTTCT--GATCAA-CCATA 354
consensus_10725#2      TCATATTTAAAAGAATCAATTGTCTTTTACAGGCCAGACAACTTCT--GATCAA-CCATA 229
consensus_10725#1      CCATATCTTATTTGGTGAACAAGCGATCCTACGAGAGGCTGTTTCAAAGATGGGTCCAGT 321
                        ** **            *    *  *   * *  ** *   ***   ***    ***  

consensus_10725#0      AATTGCCAGTAACAG-AACTTGATATATG--TGAACA---GATTGACGTAACT--TTCGA 355
consensus_10725#3      AATTGCCAGTAACAG-AACTTGATATATG--TGAACA---GATTGACGTAACT--TTCGA 406
consensus_10725#2      AATTGCCAGTAACAG-AACTTGATATATG--TGAACA---GATTGACGTAACT--TTCGA 281
consensus_10725#1      TGTAACAGATAATGGGAACTTTTTATTAGACTGGAAATTCGATACAAATAACCAATATTA 381
                         *  *   ***  * *****  ***  *  ** * *   ***  *  ****   *   *

consensus_10725#0      TGGGGCAGATGAAGTAGATGAACATCTACATTTAATCAAAGGCGGTGGT----GGCTGTT 411
consensus_10725#3      TGGGGCAGATGAAGTAGATGAACATCTACATTTAATCAAAGGCGGTGGT----GGCTGT- 461
consensus_10725#2      TGGGGCAGATGAAGTAGATGAACATCTACATTTAATCAAAGGCGGTGGT----GGCTGTT 337
consensus_10725#1      TTGGCCAGATGTAAATGTTCAACTATCACAAATACCTGGTATCGTTGATACTGGCCTGTT 441
                       * ** ****** *   * * ***    ***  **        ** ** *    * **** 

consensus_10725#0      TACTCCAGGAAAAAATTG--TTGCTTCTTGTACTAACGATTTTATAGCTATTATCGATGA 469
consensus_10725#3      ------------------------------------------------------------
consensus_10725#2      TACTCCAGGAAAAAATTG--TTGCTTCTTGTACTAACGATTTTATAGCTATTATCGATGA 395
consensus_10725#1      TATCAATATGACAAGTAGAATTTATATTGGTAATTTGAATGGTACAGTAACTAAATTGGA 501
                                                                                   

consensus_10725#0      ACGGAAACATTCAAAGAGGCTAGGTTCATATTGGACTAAAGGCTTACCAATCGAGGTAGT 529
consensus_10725#3      ------------------------------------------------------------
consensus_10725#2      ACGGAAACATTCAAAGAGGCTAGGTTCATATTGGACTAAAGGCTTACCAATCGAGGTAGT 455
consensus_10725#1      AGGAAAATCATCTAACCAACATAAATTGAACAATATGAATAATCTATAATCGATTATATT 561
                                                                                   

consensus_10725#0      TCCAATG-GCTTTCAAACCGGTACAAACAAGAATACAAAAACTATTTGGTGGACAAGCGA 588
consensus_10725#3      ------------------------------------------------------------
consensus_10725#2      TCCAATG-GCTTTCAAACCGGTACAAACAAGAATACAAAAACTATTTGGTGGACAAGCGA 514
consensus_10725#1      ACCTATCTGCTTATTGATATACTTATCCTGTTTTGTTCTACTTCCACTCAGGGTTTATAT 621
                                                                                   

consensus_10725#0      TTCTACGAGAGGCTGTTTCAAAGATGGGTCCAGTTGTAACAGATAATGGGAACTTTTTAT 648
consensus_10725#3      ------------------------------------------------------------
consensus_10725#2      TTCTACGAGAGGCTGTTTCAAGATGGGTCCAGTTGTAACAGATAATGGGAACTTTNTATT 574
consensus_10725#1      TATTATTTTCTTATTGTATTATTTTGTTGCCTTTTCATAAATGCAAAGAGAATTACTTTT 681
                                                                                   

consensus_10725#0      TAGACTGGAAATTCGATACAAATAAACAATATTATTGGCCAGATGTAAATGTTCAACTAT 708
consensus_10725#3      ------------------------------------------------------------
consensus_10725#2      AGACTGGAAATTCGATAC------------------------------------------ 592
consensus_10725#1      GTAAAAAAAAAAAAAAAAAA---------------------------------------- 701
                                                                                   

consensus_10725#0      CACAAATACCTGGTATCGTTGATACTGGCCTGTTTATCAATATGACAAGTAGAATTTATA 768
consensus_10725#3      ------------------------------------------------------------
consensus_10725#2      ------------------------------------------------------------
consensus_10725#1      ------------------------------------------------------------
                                                                                   

consensus_10725#0      TTGGTAATTTGAATGGTACAGTAACTAAATTGGAAGGAAAATCATCTAACCAACATAAAT 828
consensus_10725#3      ------------------------------------------------------------
consensus_10725#2      ------------------------------------------------------------
consensus_10725#1      ------------------------------------------------------------
                                                                                   

consensus_10725#0      TGAACAATATGAATAATCTATAATCGATTATATTACCTATCTGCTTATTGATATACTTAT 888
consensus_10725#3      ------------------------------------------------------------
consensus_10725#2      ------------------------------------------------------------
consensus_10725#1      ------------------------------------------------------------
                                                                                   

consensus_10725#0      CCTGTTTTGTTCTACTTCCACTCAGGGTTTATATTATTATTTTCTTATTGTATTATTTTG 948
consensus_10725#3      ------------------------------------------------------------
consensus_10725#2      ------------------------------------------------------------
consensus_10725#1      ------------------------------------------------------------
                                                                                   

consensus_10725#0      TTGCCTTTTCATAAATGCAAAGAGAAT 975
consensus_10725#3      ---------------------------
consensus_10725#2      ---------------------------
consensus_10725#1      ---------------------------