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Schistosoma mansoni
cluster # 10726 cluster # 10726       Sequences # 20       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10726#0 length = 995 sequences # 18  
consensus_10726#1 length = 499 sequences # 1  
consensus_10726#2 length = 435 sequences # 1  

consensusID : consensus_10726#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 18
consensus length = 995
fasta sequence
                              [TATAAAACATATGCTTTGGATTGTTCACATAAACAGGTAGGAGTTGATATGTTTATTTTCAATTCTCAATATTGTGACATTGCCACAATATCTGGAGCTAGTCGATATTCAAGTGGAACAGTTCATCATTATCCAGACTTTTATTATACACCAGATGAGGATGAACATATATTACACGCTGATGGTAAAATTAATTTTACGTCAGATGATTGTAATAAACAAC-AAAAAAGTGTATGCATTGGAGTGGAACAATTTCGTCGAGATTTCGACCGGCATTTAACCAGAAAACTTGGCTTTGAAGCTGTTATGCGTATCCGATGTACTCAAGGTTTAGCTATTCAGACTTTCCATGGTTCATGTTTTGTTCGTTCTACGGACTTGATTGCTTTACCAAATGTGAGCCCTGATTCTGGTTATGCTGTCCAGTTAGATATATCTGAAAGCTTAGAAAAATGTGCTACAGTCTGTTGCCAGGCTGCTGAATTATATACTTCATCGAAAGGTGATCGTCGCATTCGTGTACATACTTAGTGCTTACCAGTTGTGCACACAGCAACTGAAGTGTTTCAA-GG-AGCAGATCAAGGTTCAATAGCTTGTCTTCTAAGTAAAATGGCTGTTGATCGGACGATATCTTCT-GGTCTTTCAAACGC-TAGAGAAGCTTTAG-CGAATGCT-GTAGCA-GATGCTT-TATCA-GCAT-ACG-CTACCACT-TCT-GGTAT-TACACTTAATA-GTAACT-CAACAGCTTACG-GTCTACC-TTGTCCACC-GAATCTACGAC-TACTTCCT-TTGTATATTT-GTGGTTTGCTTCGTTTTAA--AGCTTTCAG-AGTT-GGAGTAACG-ACACGTTTAG-ATGATAGATCAGCCGCTCTAGAGCGAATTAAAACTGCTCCTCCTACTGATTTATTAACTTTAATATATCCAAAGTTATATGCTGTACATCGCTTCGTTTCA-AAACCTTTATCTTCT-CATGCAA-CCCTTGCCAACTGTCGAGATTGGGGATCCTCTAG]

[-] EMBL CD128813             [TATAAAACATATGCTTTGGATTGTTCACATAAACAGGTAGGAGTTGATATGTTTATTTTCAATTCTCAATATTGTGACATTGCCACAATATCTGGAGCTAGTCGATATTCAAGTGGAACAGTTCATCATTATCCAGACTTTTATTATACACCAGATGAGGATGAACATATATTACACGCTGATGGTAAAATTAATTTTACGTCAGATGATTGTAATAAACAAC AAAAAAGTGTATGCATTGGAGTGGAACAATTTCGTCGAGATTTCGACCGGCATTTAACCAGAAAACTTGGCTTTGAAGCTGTTATGCGTATCCGATGTACTCAAGGTTTAGCTATTCAGACTTTCCATGGTTCATGTTTTGTTCGTTCTACGGACTTGATTGCTTTACCAAATGTGAGCCCTGATTCTGGTTATGCTGTCCAGTTAGATATATCTGAAAGCTTAGAAAAATGTGCTACAGTCTGTTGCCAGGCTGCTGAATTATATACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD064487             [                                                                                                                                                          tcttcGATGAACATATATT CACGCTGATGGTAAAATTAATTTTACGTCAGATGATTGTAATAAACAACAAAAAAAGTGTATGCATTGGAGTGGAACAATTTCGTCGAGATTTCGACCGGTATTTAACCAGAAAACTTGGCTTTGAAGCTGTTATGCGTATCCGATGTACTCAAGGTTTAGCTATTCAGACTTTCCATGGTTCATGTTATGTTCGTTCTACGGACTTGATTGCTTTACCAAATGTGAGCCCTGATTCTGGTTATGCCGTCCAGTTAGATATATCTGAAAGCTTAGAAAAATGTGCTACAGTCTGTTGCCAGGCTGCTGTATTATATACTTCATCGAAAGGTGATCGTCGCATTCGTGTACATACTTAGTGCTTACCAGTTGTGCACACAGCAACTGAAGTGTTTCAA GG AGCAGATCAAGGTTCAATAGCTTGTCTTCTAAGTAAAATGGCTGTTGATCGGACGATATCTTCT GGTCTTTCAAACGC TAGAGAAGC TTAG CG                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD159002             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TTACCAGTTGTGCACACAGCAACTGAAGTGTTTCAA GG AGCAGATCAAGGTTCAATAGCTTGTCTTCTAAGTAAAATGGCTGTTGATCGGACGATATCTTCT GGTCTTTCAAACGC TAGAGAAGCTTTAG CGAATGCT GTAGCA GATGCTT TATCA GCAT ACG CTACCACT TCT GGTAT TACACTTAATA GTAACT CAACAGCTTACG GTCTACC TTGTCCACC GAATCTACGAC TACTTCCT TTGTATATTT GTGGTTTGCTTCGTTTTAA  AGCTTTCAG AGTT GGAGTAACG ACACGTTTAG ATGATAGATCAGCCGCTCTAGAGCGAATTAAAACTGCTCCTCCTACTGATTTATTAACTTTAATATATCCAAAGTTATATGCTGTACATCGCTTCGTTTCA AAACCT                                                    ]
[-] EMBL CD085409             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       cgACAAGTTGTGCACACAGCAACTGAAGTGTTTCAA GG AGCAGATCAAGGTTCAATAGCTTGTCTTGTAAGTAAAATGGCTGTTGATCGGACGATATCTTCT GGTCTTTCGAACGC TAGAGAAGCTTTAG CGAATGCT GTAGCA GATGCTT TATCA GCAT ACG CTACCACT TCT GGTAT TACACTTAATA GTAACT CAACAGCTTACG GTCTACC TTGTCCACC GAATCTACGAC TACTTCCT TTGTATATTT GTGGTTTGCTTCGTTTTAA  AGCTTTCAG AGTT GGAGTAACG ACACGTTTAG ATGATAGATCAGCCGCTCTAGAGCGAATTAAAACTGCTCCTCCTACTGATCTATTAACTTTAATATATCCAAAGTTATATGCTGTACATCGCTTCGTTTCAGAAACCTTTATCTTCTCCATGCAACCCCTTGCCA                         ]
[+] EMBL CD061406             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TGAAGTGTTTCAA GG AGCAGATCAAGGTTCAATAGCTTGTCTTCTAAGTAAAATGGCTGTTGATCGGACGATATCTTCTAGGTCTTTCAAACGCATAGAGAAGCTTTAGACGAATGCTAGTAGCANGATGCTTATATCATGCATAACGCCTACCACTGTCTGGGTATATACACTTAATACGTAACTACAACAGCTTACGTGTCTACCGTTGTCCACCNGAATCTACGACGTACTTCCTATTGTATATTTGGTGGTTTGCTTCGTGTTAAAGAGCTTTCAGAAGTTGGGAGTAACGAACACGTTTAGAATGATAGATCAGCCGCTCTAGAGCGAATTAAAACTGCTCCTCCTACTGATTTATTAACTTTAATATATCCAAAGTTATATGCTGTACATCGCTTCGTTTCA AAACCTTTATCTTCT C                                         ]
[+] EMBL CD061471             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TGAAGTGTTTCAA GG AGCAGATCAAGGTTCAATAGCTTGTCTTCTAAGTAAAATGGCTGTTGATCGGACGATATCTTCT GGTCTTTCAAACGC TAGAGAAGCTTTAG CGAATGCT GTAGCA GATGCTT TATCA GCAT ACG CTACCACT TCT GGTAT TACACTTAATA GTAACT CAACAGCTTACG GTCTACC TTGTCCACC GAATCTACGAC TACTTCCT TTGTATATTT GTGGTTTGCTTCGTTTTAA  AGCTTTCAG AGTT GGAGTAACG ACACGTTTAG ATGATAGATCAGCCGCTCTAGAGCGAATTAAAACTGCTCCTCCTACTGATTTATTAACTTTAATATATCCAAAGTTATATGCTGTACATCGCTTCGTTTCA AAACCTTTATCTTCT C                                         ]
[+] EMBL CD061495             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TGAAGTGTTTCAA GG AGCAGATCAAGGTTCAATAGCTTGTCTTCTAAGTAAAATGGCTGTTGATCGGACGATATCTTCT GGTCTTTCAAGCGC TAGAGAAGCTTTAG CGAATGCT GTAGCA GATGCTT TATCA GCAT ACG CTACCACT TCT GGTAT TACACTTAATA GTAACT CAACAGCTGACG GTCTACC TTGTCCACC GAATCTACGAC TACTTCCT TTGTATATTT GTGGTTTGCTTCGTTTTAA  AGCTTTCAG AGTT GGAGTAACG ACACGTTTAG ATGATAGATCAGCCGCTCTAGAGCGAATTAAAACTGCTCCTCCTACTGATTTATTAACTTTAATATATCCAA                                                                                        ]
[+] EMBL CD061285             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TGAAGTGTTTCAAGGG AGCAGATCAAGGTTCAATAGCTTGTCTTCTAAGTAAAATGGCTGTTGATCGGACGATATCTTCT GGTCTTTCAAACGC TAGAGAAGCTTTAG CGAATGCT GTAGCA GATGCTT TATCA GCAT ACG CTACCACT TCT GGTAT TACACTTAATA GTAACT CAACAGCTTACG GTCTACC TTGTCCACC GAATCTACGAC TACTTCCT TTGTATATTT GTGGTTTGCTTCGTTTTAA  AGCTTTCAG AGTT GGAGTAACG ACACGTTTAG ATGATAGATCAGCCGCTCTAGAGCGAATTAAAACTGCTCCTCCTACTGATTTATTAACTTTAATATATCCAAAGTTATATGCTGTACATCGCTTCGTTTCA AAACCTTTATCTTCT C                                         ]
[+] EMBL CD061235             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TGAAGTGTTTCAA GG AGCAGATCAAGGTTCAATAGCTTGTCTTCTAAGTAAAATGGCTGTTGATCGGACGATATCTTCT GGTCTTTCAAACGC TAGAGAAGCTTTAG CGAATGCT GTAGCA GATGCTT TATCA GCAT ACG CTACCACT TCT GGTAT TACACTTAATA GTAACT CAACAGCTTACG GTCTACC TTGTCCACC GAATCTACGAC TACTTCCT TTGTATATTT GTGGTTTGCTTCGTTTTAA  AGCTTTCAG AGTT GGAGTAACG ACACGTTTAG ATGATAGATCAGCCGCTCTAGAGCGAATTAAAACTGCTCCTCCTACTGATTTATTAACTTTAATATATCCAAAGTTATATGCTGTACATCGCTTCGTTTCA AAACCTTTATCTTCT C                                         ]
[-] EMBL CD061462             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GAAGTGTTTCAA GG AGCAGATCAAGGTTCAATAGCTTGTCTTCTAAGTAAAATGGCTGTTGATCGGACGATATCTTCT GGTCTTTCAAACGC TAGAGAAGCTTTAG CGAATGCT GTAGCA GATGCTT TATCA GCAT ACG CTACCACT TCT GGTAT TACACTTAATA GTAACT CAACAGCTTACG GTCTACC TTGTCCACC GAATCTACGAC TACTTCCT TTGTATATTT GTGGTTTGCTTCGTTTTAA  AGCTTTCAG AGTT GGAGTAACG ACACGTTTAG ATGATAGATCAGCCGCTCTAGAGCGAATTAAAACTGCTCCTCCTACTGATTTATTAACTTTAATATATCCAAAGTTATATGCTGTACATCGCTTCGTTTCA AAACCTTTATCTTCT CA                                        ]
[-] EMBL CD061347             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GAAGTGTTTCAA GG AGCAGATCAAGGTTCAATAGCTTGTCTTCTAAGTAAAATGGCTGTTGATCGGACGATATCTTCT GGTCTGTCAAACGC TAGAGAAGCTTTAG CGAATGCT GTAGCA GATGCTT TATCA GCAT ACG CTACCACT TCT GGTAT TACACTTAATA GTAACT CAACAGCTTACG GTCTACC TTGTCCACC GAATCTACGAC TACTTCCT TTGTATATTT GTGGTTTGCTTCGTTTTAA  AGCTTTCAG ATTT GGAGTAACG ACACGTTTAG ATGATAGATCAGCCGCTCTAGAGCGAATTAAAACTGCTCCTCCTACTGATTTATTAACTTTAATATATCCAAAGTTATATGCTGTACATCGCTTCGTTTCA AAACCTTTATCTTCT CATGC                                     ]
[-] EMBL CD061466             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GAAGTGTTTCAA GG AGCAGATCAAGGTTCAATAGCTTGTCTTCTAAGTAAAATGGCTGTTGATCGGACGATATCTTCT GGTCTTTCAAACGC TAGAGAAGCTTTAG CGAATGCT GTAGCA GATGCTT TATCA GCAT ACG CTACCACT TCT GGTAT TACACTTAATA GTAACT CAACAGCTTACG GTCTACC TTGTCCACC GAATCTACGAC TACTTCCT TTGTATATTT GTGGTTTGCTTCGTTTTAA  AGCTTTCAG AGTT GGAGTAACG ACACGTTTAG ATGATAGATCAGCCGCTCTAGAGCGAATTAAAACTGCTCCTCCTACTGATTTATTAACTTTAATATATCCAAAGTTATATGCTGTACATCGCTTCGTTTCA AAACCTTTATCTTCT CA                                        ]
[+] EMBL CD061385             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GAAGTGTTTCAA GGCAGCAGATCAAGGTTCAATAGCTTGTCTTCTAAGTAAAATGGCTGTTGATCGGACGATATCTTCT GGTCTTTCAAACGC TAGAGAAGCTTTAG CGAATGCT GTAGCA GATGCTT TATCA GCAT ACG CTACCACT TCT GGTAT TACACTTAATA GTAACT CAACAGCTTACG GTCTACC TTGTCCACC GAATCTACGAC TACTTCCT TTGTATATTT GTGGTTTGCTTCGTTTTAA  AGCTTTCAG AGTT GGAGTAACG ACACGTTTAG ATGATAGATCAGCCGCTCTAGAGCGAATTAAAACTGCTCCTCCTACTGATTTATTAACTTTAATATATCCAAAGTTATATGCTGTACATCGCTTCGTTTCA AAACCTTTATCTTCT C                                         ]
[-] EMBL CD061493             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GAAGTGTTTCAA GG AGCAGATCAAGGTTCAATAGCTTGTCTTCTAAGTAAAATGGCTGTTGATCGGACGATATCTTCT GGTCTTTCAAACGC TAGAGAAGCTTTAG CGAATGCT GTAGCA GATGCTT TATCA GCAT ACG CTACCACT TCT GGTAT TACACTTAATA GTAACT CAACAGCTTACG GTCTACC TTGTCCACC GAATCTACGAC TACTTCCT TTGTATATTT GTGGTTTGCTTCGTTTTAA  AGCTTTCAG AGTT GGAGTAACG ACACGTTTAG ATGATAGATCAGCCGCTCTAGAGCGAATTAAAACTGCTCCTCCTACTGATTTATTAACTTTAATATATCCAAAGTTATATGCTGTACATCGCTTCGTTTCA AAACCTTTATCTTCT CA                                        ]
[-] EMBL CD061207             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GAAGTGTTTCAA GG AGCAGATCAAGGTTCAATAGCTTGTCTTCTAAGTAAAATGGCTGTTGATCGGACGATATCTTCT GGTCTTTCAAACGC TAGAGAAGCTTTAG CGAATGCT GTAGCA GATGCTT TATCA GCAT ACG CTACCACT TCT GGTAT TACACTTAATA GTAACT CAACAGCTTACG GTCTACC TTGTCCACC GAATCTACGAC TACTTCCT TTGTATATTT GTGGTTTGCTTCGTTTTAA  AGCTTTCAG AGTT GGAGTAACG ACACGTTTAG ATGATAGATCAGCCGCTCTAGAGCGAATTAAAACTGCTCCTCCTACTGATCTATTAACTTTAATATATCCAAAGTTATATGCTGTACATCGCTTCGTTTCA AAACCTTTATCTTCT CA                                        ]
[+] EMBL CD061277             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GAAGTGTTTCAA GG AGCAGATCAAGGTTCAATAGCTTGTCTTCTAAGTAAAATGGCTGTTGATCGGACGATATCTTCT GGTCTTTCAAACGC TAGAGAAGCTTTAG CGAATGCT GTAGCA GATGCTT TATCA GCAT ACG CTACCACT TCT GGTAT TACACTTAATA GTAACT CAACAGCTTACG GTCTACC TTGTCCACC GAATCTACGAC TACTTCCT TTGTATATTT GTGGTTTGCTTCGTTTTAA  AGCTTTCAG AGTT GGAGTAACG ACACGTTTAG ATGATAGATCAGCCGCTCTAGAGCGAATTAAAACTGCTCCTCCTACTGATTTATTAACTTTAATATATCCAAAGTTATATGCTGTACATCGCTTCGTTTCA AAACCTTTATCTTCT C                                         ]
[-] EMBL CD061339             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GAAGTGTTTCAA GG AGCAGATCAAGGTTCAATAGCTTGCCTTCTAAGTAAAATGGCTGTTGATCGGACGATATCTTCT GGTCTTTCAAACGC TAGAGAAGCTTTAG CGAATGCT GTAGCA GATGCTT TATCA GCAT ACG CTACCACT TCT GGTAT TACACTTAATA GTAACT CAACAGCTTACG GTCTACC TTGTCCACC GAATCTACGAC TACTTCCT TTGTATATTT GTGGTTTGCTTCGTTTTAA  AGCTTTCAG AGTT GGAGTAACG ACACGTTTAG ATGATAGATCAGCCGCTCTAGAGCGAATTAAAACTGCTCCTCCTACTGATTTATTAACTTTAATATATCCGAAGTTATATGCTGTACATCGCTTCGTTTC  AAACCTTTATCTTCT C                                         ]
[-] EMBL CD061197             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TTCAATAGCTTGTCTTCTAAGTAAAATGGCTGTTGATCGGACGATATCTTCT GGTCTTTCAAACGC TAGAGAAGCTTTAG CGAATGCT GTAGCA GATGCTT TATCA GCAT ACG CTACCACT TCT GGTAT TACACTTAATA GTAACT CAACAGCTTACG GTCTACC TTGTCCACC GAATCTACGAC TACTTCCT TTGTATATTT GTGGTTTGCTTCGTTTTAA  AGCTTTCAG AGTT GGAGTAACG ACACGTTTAG ATGATAGATCAGCCGCTCTAGAGCGAATTAAAACTGCTCCTCCTACTGATTTATTAACTTTAATATATCCAAAGTTATATGCTGTACATCGCTTCGTTTCA AAACC TTATCTTCT CATGCAA CCCTTGCACACTGTCGAGATTGGGGATCCTCTAG]


>consensus_10726#0 TATAAAACATATGCTTTGGATTGTTCACATAAACAGGTAGGAGTTGATATGTTTATTTTC AATTCTCAATATTGTGACATTGCCACAATATCTGGAGCTAGTCGATATTCAAGTGGAACA GTTCATCATTATCCAGACTTTTATTATACACCAGATGAGGATGAACATATATTACACGCT GATGGTAAAATTAATTTTACGTCAGATGATTGTAATAAACAACAAAAAAGTGTATGCATT GGAGTGGAACAATTTCGTCGAGATTTCGACCGGCATTTAACCAGAAAACTTGGCTTTGAA GCTGTTATGCGTATCCGATGTACTCAAGGTTTAGCTATTCAGACTTTCCATGGTTCATGT TTTGTTCGTTCTACGGACTTGATTGCTTTACCAAATGTGAGCCCTGATTCTGGTTATGCT GTCCAGTTAGATATATCTGAAAGCTTAGAAAAATGTGCTACAGTCTGTTGCCAGGCTGCT GAATTATATACTTCATCGAAAGGTGATCGTCGCATTCGTGTACATACTTAGTGCTTACCA GTTGTGCACACAGCAACTGAAGTGTTTCAAGGAGCAGATCAAGGTTCAATAGCTTGTCTT CTAAGTAAAATGGCTGTTGATCGGACGATATCTTCTGGTCTTTCAAACGCTAGAGAAGCT TTAGCGAATGCTGTAGCAGATGCTTTATCAGCATACGCTACCACTTCTGGTATTACACTT AATAGTAACTCAACAGCTTACGGTCTACCTTGTCCACCGAATCTACGACTACTTCCTTTG TATATTTGTGGTTTGCTTCGTTTTAAAGCTTTCAGAGTTGGAGTAACGACACGTTTAGAT GATAGATCAGCCGCTCTAGAGCGAATTAAAACTGCTCCTCCTACTGATTTATTAACTTTA ATATATCCAAAGTTATATGCTGTACATCGCTTCGTTTCAAAACCTTTATCTTCTCATGCA ACCCTTGCCAACTGTCGAGATTGGGGATCCTCTAG



consensusID : consensus_10726#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 499
fasta sequence
                              [GATCGTCGCATTCGTGTACATACTTTGTGCTTACCAGTTGTGCACACAGCAACTGAAGTGTTTCAAGGAGCAGATCAAGGTTCAATAGCTTGTCTTCTAAGTAAAATGGCTGTTGATCGGACGATATCTTCTGGTCTTTCAAACGCTAGAGAAGCTTTAGCGAATGCTGTAGCAGATGCTTTATCAGCATACGCTACCACTTCTGGTATTACACTTAATAGTAACTCAACAGCTTACGGTCTACCTTGCCCACCGAATCTACGACTACTTCCTTTGTATATTTGTGGTTTGCTTCGTTTTAAAGCTTTCAGAGTTGGAGTAACGACACGTTTAGATGATAGATCAGCCGCTCTAGAGCGAATTAAAACTGCTCCTCCTACTGATTTATTAACTTTAATATATCCAAAGTTATATGCTGTACATCGCTTCGTTTCAAAACCTTTATCTTCTCATGCAACCCTTGCACAAAAAGCTGCTAGTCTTCGTTTAGTTGATCATA]

[-] EMBL CD154119             [GATCGTCGCATTCGTGTACATACTTTGTGCTTACCAGTTGTGCACACAGCAACTGAAGTGTTTCAAGGAGCAGATCAAGGTTCAATAGCTTGTCTTCTAAGTAAAATGGCTGTTGATCGGACGATATCTTCTGGTCTTTCAAACGCTAGAGAAGCTTTAGCGAATGCTGTAGCAGATGCTTTATCAGCATACGCTACCACTTCTGGTATTACACTTAATAGTAACTCAACAGCTTACGGTCTACCTTGCCCACCGAATCTACGACTACTTCCTTTGTATATTTGTGGTTTGCTTCGTTTTAAAGCTTTCAGAGTTGGAGTAACGACACGTTTAGATGATAGATCAGCCGCTCTAGAGCGAATTAAAACTGCTCCTCCTACTGATTTATTAACTTTAATATATCCAAAGTTATATGCTGTACATCGCTTCGTTTCAAAACCTTTATCTTCTCATGCAACCCTTGCACAAAAAGCTGCTAGTCTTCGTTTAGTTGATCATA]


>consensus_10726#1 GATCGTCGCATTCGTGTACATACTTTGTGCTTACCAGTTGTGCACACAGCAACTGAAGTG TTTCAAGGAGCAGATCAAGGTTCAATAGCTTGTCTTCTAAGTAAAATGGCTGTTGATCGG ACGATATCTTCTGGTCTTTCAAACGCTAGAGAAGCTTTAGCGAATGCTGTAGCAGATGCT TTATCAGCATACGCTACCACTTCTGGTATTACACTTAATAGTAACTCAACAGCTTACGGT CTACCTTGCCCACCGAATCTACGACTACTTCCTTTGTATATTTGTGGTTTGCTTCGTTTT AAAGCTTTCAGAGTTGGAGTAACGACACGTTTAGATGATAGATCAGCCGCTCTAGAGCGA ATTAAAACTGCTCCTCCTACTGATTTATTAACTTTAATATATCCAAAGTTATATGCTGTA CATCGCTTCGTTTCAAAACCTTTATCTTCTCATGCAACCCTTGCACAAAAAGCTGCTAGT CTTCGTTTAGTTGATCATA



consensusID : consensus_10726#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 435
fasta sequence
                              [TAGAGGATCCCGAATCTCGACAGTGTGCACACAGCAACTGAAGTGTTCAAGGAGCAGATCAAGGTTCAATAGCTTGTCTTCTAAGTAAAATGGCTGTTGATCGGACGATATCTTCTGGTCTTTCAAACGCTAGAGAAGCTTTAGCGAATGCTGTAGCAGATGCTTTATCAGCATACGCTACCACTTCTGGTATTACACTTAATAGTAACTCAACAGCTTACGGTCTACCTTGTCCACCGAATCTACGACTACTTCCTTTGTATATTTGTGGTTTGCTTCGTTTTAAAGCTTTCAGAGTTGGAGTAACGACACGTTTAGATGATAGATCAGCCGCTCTAGAGCGAATTAAAACTGCTCCTCCTACTGATTTATTAACTTTAATATATCCAAAGTTATATGCTGTACATCGCTTCGTTTCAAAACCTTTATCTTCTC]

[+] EMBL CD061240             [TAGAGGATCCCGAATCTCGACAGTGTGCACACAGCAACTGAAGTGTTCAAGGAGCAGATCAAGGTTCAATAGCTTGTCTTCTAAGTAAAATGGCTGTTGATCGGACGATATCTTCTGGTCTTTCAAACGCTAGAGAAGCTTTAGCGAATGCTGTAGCAGATGCTTTATCAGCATACGCTACCACTTCTGGTATTACACTTAATAGTAACTCAACAGCTTACGGTCTACCTTGTCCACCGAATCTACGACTACTTCCTTTGTATATTTGTGGTTTGCTTCGTTTTAAAGCTTTCAGAGTTGGAGTAACGACACGTTTAGATGATAGATCAGCCGCTCTAGAGCGAATTAAAACTGCTCCTCCTACTGATTTATTAACTTTAATATATCCAAAGTTATATGCTGTACATCGCTTCGTTTCAAAACCTTTATCTTCTC]


>consensus_10726#2 TAGAGGATCCCGAATCTCGACAGTGTGCACACAGCAACTGAAGTGTTCAAGGAGCAGATC AAGGTTCAATAGCTTGTCTTCTAAGTAAAATGGCTGTTGATCGGACGATATCTTCTGGTC TTTCAAACGCTAGAGAAGCTTTAGCGAATGCTGTAGCAGATGCTTTATCAGCATACGCTA CCACTTCTGGTATTACACTTAATAGTAACTCAACAGCTTACGGTCTACCTTGTCCACCGA ATCTACGACTACTTCCTTTGTATATTTGTGGTTTGCTTCGTTTTAAAGCTTTCAGAGTTG GAGTAACGACACGTTTAGATGATAGATCAGCCGCTCTAGAGCGAATTAAAACTGCTCCTC CTACTGATTTATTAACTTTAATATATCCAAAGTTATATGCTGTACATCGCTTCGTTTCAA AACCTTTATCTTCTC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10726#0      TATAAAACATATGCTTTGGATTGTTCACATAAACAGGTAGGAGTTGATATGTTTATTTTC 60
consensus_10726#2      ------------------------------------------------------------
consensus_10726#1      ------------------------------------------------------------
                                                                                   

consensus_10726#0      AATTCTCAATATTGTGACATTGCCACAATATCTGGAGCTAGTCGATATTCAAGTGGAACA 120
consensus_10726#2      ------------------------------------------------------------
consensus_10726#1      ------------------------------------------------------------
                                                                                   

consensus_10726#0      GTTCATCATTATCCAGACTTTTATTATACACCAGATGAGGATGAACATATATTACACGCT 180
consensus_10726#2      ------------------------------------------------------------
consensus_10726#1      ------------------------------------------------------------
                                                                                   

consensus_10726#0      GATGGTAAAATTAATTTTACGTCAGATGATTGTAATAAACAACAAAAAAGTGTATGCATT 240
consensus_10726#2      ------------------------------------------------------------
consensus_10726#1      ------------------------------------------------------------
                                                                                   

consensus_10726#0      GGAGTGGAACAATTTCGTCGAGATTTCGACCGGCATTTAACCAGAAAACTTGGCTTTGAA 300
consensus_10726#2      ------------------------------------------------------------
consensus_10726#1      ------------------------------------------------------------
                                                                                   

consensus_10726#0      GCTGTTATGCGTATCCGATGTACTCAAGGTTTAGCTATTCAGACTTTCCATGGTTCATGT 360
consensus_10726#2      ------------------------------------------------------------
consensus_10726#1      ------------------------------------------------------------
                                                                                   

consensus_10726#0      TTTGTTCGTTCTACGGACTTGATTGCTTTACCAAATGTGAGCCCTGATTCTGGTTATGCT 420
consensus_10726#2      ------------------------------------------------------------
consensus_10726#1      ------------------------------------------------------------
                                                                                   

consensus_10726#0      GTCCAGTTAGATATATCTGAAAGCTTAGAAAAATGTGCTACAGTCTGTTGCCAGGCTGCT 480
consensus_10726#2      ------------------------------------------------------------
consensus_10726#1      ------------------------------------------------------------
                                                                                   

consensus_10726#0      GAATTATATACTTCATCGAAAGGTGATCGTCGCATTCGTGTACATACTTAGTGCTTACCA 540
consensus_10726#2      --------------------------------------TAGAGGATCCCGAATCTCGACA 22
consensus_10726#1      ------------------------GATCGTCGCATTCGTGTACATACTTTGTGCTTACCA 36
                                                             *  *    *      **   **

consensus_10726#0      GTTGTGCACACAGCAACTGAAGTGTTTCAAGGAGCAGATCAAGGTTCAATAGCTTGTCTT 600
consensus_10726#2      GT-GTGCACACAGCAACTGAAGTGTT-CAAGGAGCAGATCAAGGTTCAATAGCTTGTCTT 80
consensus_10726#1      GTTGTGCACACAGCAACTGAAGTGTTTCAAGGAGCAGATCAAGGTTCAATAGCTTGTCTT 96
                       ** *********************** *********************************

consensus_10726#0      CTAAGTAAAATGGCTGTTGATCGGACGATATCTTCTGGTCTTTCAAACGCTAGAGAAGCT 660
consensus_10726#2      CTAAGTAAAATGGCTGTTGATCGGACGATATCTTCTGGTCTTTCAAACGCTAGAGAAGCT 140
consensus_10726#1      CTAAGTAAAATGGCTGTTGATCGGACGATATCTTCTGGTCTTTCAAACGCTAGAGAAGCT 156
                       ************************************************************

consensus_10726#0      TTAGCGAATGCTGTAGCAGATGCTTTATCAGCATACGCTACCACTTCTGGTATTACACTT 720
consensus_10726#2      TTAGCGAATGCTGTAGCAGATGCTTTATCAGCATACGCTACCACTTCTGGTATTACACTT 200
consensus_10726#1      TTAGCGAATGCTGTAGCAGATGCTTTATCAGCATACGCTACCACTTCTGGTATTACACTT 216
                       ************************************************************

consensus_10726#0      AATAGTAACTCAACAGCTTACGGTCTACCTTGTCCACCGAATCTACGACTACTTCCTTTG 780
consensus_10726#2      AATAGTAACTCAACAGCTTACGGTCTACCTTGTCCACCGAATCTACGACTACTTCCTTTG 260
consensus_10726#1      AATAGTAACTCAACAGCTTACGGTCTACCTTGCCCACCGAATCTACGACTACTTCCTTTG 276
                       ******************************** ***************************

consensus_10726#0      TATATTTGTGGTTTGCTTCGTTTTAAAGCTTTCAGAGTTGGAGTAACGACACGTTTAGAT 840
consensus_10726#2      TATATTTGTGGTTTGCTTCGTTTTAAAGCTTTCAGAGTTGGAGTAACGACACGTTTAGAT 320
consensus_10726#1      TATATTTGTGGTTTGCTTCGTTTTAAAGCTTTCAGAGTTGGAGTAACGACACGTTTAGAT 336
                       ************************************************************

consensus_10726#0      GATAGATCAGCCGCTCTAGAGCGAATTAAAACTGCTCCTCCTACTGATTTATTAACTTTA 900
consensus_10726#2      GATAGATCAGCCGCTCTAGAGCGAATTAAAACTGCTCCTCCTACTGATTTATTAACTTTA 380
consensus_10726#1      GATAGATCAGCCGCTCTAGAGCGAATTAAAACTGCTCCTCCTACTGATTTATTAACTTTA 396
                       ************************************************************

consensus_10726#0      ATATATCCAAAGTTATATGCTGTACATCGCTTCGTTTCAAAACCTTTATCTTCTCATGCA 960
consensus_10726#2      ATATATCCAAAGTTATATGCTGTACATCGCTTCGTTTCAAAACCTTTATCTTCTC----- 435
consensus_10726#1      ATATATCCAAAGTTATATGCTGTACATCGCTTCGTTTCAAAACCTTTATCTTCTCATGCA 456
                       *******************************************************     

consensus_10726#0      ACCCTTGCCAACTGTCGAGATTGGGGATCCTCTAG--------- 995
consensus_10726#2      --------------------------------------------
consensus_10726#1      ACCCTTGCACAAAAA-GCTGCTAGTCTTCGTTTAGTTGATCATA 499
                                                                   




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)