cluster # 10727

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Schistosoma mansoni
cluster # 10727 cluster # 10727 Sequences # 20 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10727#0 length = 1279 sequences # 14
consensus_10727#1 length = 765 sequences # 4

consensus_10727#2 length = 434 sequences # 1
consensus_10727#3 length = 113 sequences # 1

consensusID : consensus_10727#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 14
consensus length = 1279
fasta sequence

                              [TGTTATTTATTTTAGTAAGCGCGAAATGAACACTGTACATATACACGTAAGTATCCCGGATGCAAATTAACTAATGTTACGAATAGTTATGATAACAAGACAACAGGAGAATTATATTCAGATCCTTTAAAAATAATCATTATTTTAAGAGAAAAACAGGAAATAAATCCTAATGACATAACTGCATACACATATACAAAAAAGGGGATAGAATTGCAAAAAGGTGAAGATGACATTGAAGATTATATATAAAAGAATGAACAATCTACAATGACATCTTTATATTGCAATTTCATTATTTCGTAGGTAAAGGAGATAGAAAAAAGTATTGTCCTGAATAAGTGTTGTTTTACAGGAGTAACCGAACACCAACCGATCGTATTGTTGTTGTCCATTATTGTTTTTTTCGTTTGTGGTTTACATGAGTTGAGCTGTCACTATCATTGTCTGCATTTCCGTTGTTAGGATGAGATCTTTTGCTATTGGATTGACTTTCGGGTTTGGAAGATGCTTCACTGTGGGAACTTGATGATGAGTCAGAGTGTGAGGTCTGGCTAGAAGATGAAGAAGAATCAGAGTCTGAATCCGAGGAAGATGAGTGACTATGACTTCGTGATTTGTTTTTTGCAGCTTTTTGTGGAGATGCAGGTTCTCGTTGATTTGATAACTCATCACCCGAATCGTTGTTTTCTGCTCCCCAAATATCATACTTTGAGAGATCAGCATCATCGCCAGAATCTTCATCCTCACTATCATCACCTTTATTATTGCCATTTTCGTCCTCATCATCTTTATCACGAACTCGTGTAACAGAATTGTTACCAAAATTAGACGGGTCATGGTTGCTGGGTTGTTCACTTTGATTTTTCCGGAAACTTTTCTTTTTGCGACGGATTCATCAAACTCATCATCTGAGTCTCTGCGTTCTCTGTATTCAACTACCTCATCGCGCTCCATAAACCCTCCACCATAACCTGTTCTTTCT-CCTTGTACGTCGATCTTCGATCCGTTGCACACGTTGCAAGTACTTCGACGTGC-CCAGTTGATATTTC-AACATGTCTTACAAATCCAATCATCTGGACTGAAAAGACCTTTGCTTTTTTTCGGCTAGTTGTTTCCCGACCTCTAAACCAGCATTACCTGGGGCCACAAATTTCCTAGGCTTGTCACAGCGGTTGCACTTGTCCCTTTTAGCAAAATTCACATTTTTACATTTCGGATTACTACAAACCCAATCTTCTTTTGATGAGCGAGACATAGATGTGCAGCGTTAACAACT]

[+] EMBL CD075037             [TGTTATTTATTTTAGTAAGCGCGAAATGAACACTGTACATATACACGTAAGTATCCCGGATGCAAATTAACTAATGTTACGAATAGTTATGATAACAAGACAACAGGAGAATTATATTCAGATCCTTTAAAAATAATCATTATTTTAAGAGAAAAACAGGAAATAAATCCTAATGACATAACTGCATACACATATACAAAAAAGGGGATAGAATTGCAAAAAGGTGAAGATGACATTGAAGATTATATATAAAAGAATGAACAATCTACAATGACATCTTTATATTGCAATTTCATTATTTCGTAGGTAAAGGAGATAGAAAAAAGTATTGTCCTGAATAAGTGTTGTTTTACAGGAGTAACCGAACACCAACCGATCGTATTGTTGTTGTCCATTATTGTTTTTTTCGTTTGTGGTTTACATGAGTTGAGCTGTCACTATCATTGTCTGCATTTCCGTTGTTAGGATGAGATCTTTTGCTATTGGATTGACTTTCGGGTTTGGAAGATGCTTCACTGTGGGAACTTGATGATGAGTCAGAGTGTGAGGTCTGGCTAGAAGATGAAGAAGAATCAGAGTCTGAATCCGAGGAAGATGAGTGACTATGACTTCGTGATTTGTTTTTTGCAGCTTTTTGTGGAGATGCAGGTTCTCGTTGATTTGATAACTCATCACCCGAATCGTTGTTTTCTGCTCCCCAAATATCATACTTTGAGAGATCAGCATCATCGCCAGAATCTTCATCCTCACTATCATCACCTTTATTATTGCCATTTTCGTCCTCATCATCTTTATCACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD182228             [                                                                                                                                                                                                                                                                                                                                                                       tACCGAACACCAACCGATCGTATTGTTGTTGCCCATTATTGTTTTTTTCGTTTGTGGTTTACATGAGTTGAGCTGTCACTATCATTGTCTGCATTTCCGTTGTTAGGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD083694             [                                                                                                                                                                                                                                                                                                                                                                                               GTTGTTGTCCATTATTGTTTTTTTCGTTTGTGGTTTACATGAGTTGAGCTGTCACTATCATTGTCTGCATTTCCGTTGTTAGGATGAGATCTTTTGCTATTGGATTGACTTTCGGGTTTGGAAGATGCTTCACTGTGGGAACTTGATGATGAGTCAGAGTGTGAGGTCTGGCTAGAAGATGAAGAAGAATCAGAGTCTGAATCCGAGGAAGATGAGTGACTATGACTTCGTGATTTGTTTTTTGCAGCTTTTTGTGGAGATGCAGGTTCTCGTTGATTTGATAACTCATCACCCGAATCGTTGTTTTCTGCTCCCCAAATATCATACTTTGAGAGATCAGCATCATCGCCAGAATCTTCATCCTCACTATCATCACCTTTATTATTGCCATTTTCGTCCTCATCATCTTTATCACGAACTCGTGTAACAGAATTGTTACCAAAATTAGACGGGTCATGGTTGCTGGGTTGTTCACTTTGATTTTTCCGGAAACTTTTCTTTTTGCG                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD138101             [                                                                                                                                                                                                                                                                                                                                                                                                                                         GTTGAGCTGTCACTATCATTGTCTGCATTTCCGTTG TAGGATGAGATCTTTTGCTATTGGATTGACTTTCGGGTTTGGAAGATGCTTCACTGTGGGAACTTGATGATGAGTCAGAGTGTGAGGCCTGGCTAGAAGATGAAGAAGAATCAGAGTCTGAATCCGAGGAAGATGAGTGACTATGACTTCGTGATTTGTTTTTTGCAGCTTTTTGTGGAGATGCAGGTTCTCGTTGATTTGATAACTCATCACCCGAATCGTTGTTTTCTGCTCCCCAAATATCATACTTTGAGAGATCAGCATCATCGCCAGAATCTTCATCCTCACTATCATCACCTTTATTATTGCCATTTTCGTCCTCATCATCTTTATCACGAACTCGTGTAACAGAATTGTTACCAAAATTAGACGGGTCATGGTTGCTGGGTTGTTCACTTTGATTTT                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD162193             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ATTGACTATCGGGTTTGGAAGATGCTTCACTGTGGGAACTTGATAATGAGTCAGAGTGTGAGGTCTGGCTAGAAGATGAAGAAGAATCAGAGTCTGAATCCGAGGAAGATGAGTGACTATGACTTCGAGATTTGTTTTTTGCAGCTTTTTGTGGAGATGCAGGTTCTCGTTGATTTGATAACTCATCACCCGAATCGTTGTTTTCTGCTCCCCAAATATCATACTTTGAGAGATCAGCATCATCGCCAGAATCTTCATCCTCACTATCATCACCTTTATTATTGCCATTTTCGTCCTCATCATCTTTATCACGAACTCGTGTAACAGAATTGTTACCAAAATTAGACGGGTCATGGTTGCTGGGTTGTTCACTTTGATTTT                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD187509             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GATGATGAGTCAGAGTGTGAGGTCTGGCTAGAAGATGAAGAAGAATCAGAGTCTGAATCCGAGGTAGATGAGTGACTATGACTTCGTGATTTGTTTTTTGCAGCTTTTTGTGGAGATGCAGGTTCTCGTTGATTTGATAACTCATCACCCGAATCGTTGTTTTCTGCTCCCCAAATATCATACTTTGAGAGATCAGCATCATCGCCAGAATCTTCATCCTCACTATCATCACCTTTATTATTGCCATTTTCGTCCTCATCATCTTTATCACGAACTCGTGTAACAGAATTGTTACCAAAATTAGACGGGTCATGGTTGCTGGGTTGTTCACTTTGATTT                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD195105             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TTGATAACTCATCACCCGAATCGTTGTTTTCTGCTCCCCAAATATCATACTTTGAGAGATCAGCATCATCGCCAGAATCTTCATCCTCACTATCATCACCTTTATTATTGCCATTTTCGTCCTCATCATCTTTATCACGAACTCGTGTAACAGAATTGTTACCAAAATTAGACGGGTCATGGTTGCTGGGTTGTTCACTTTGATTTT                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD162165             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ATCACCCGAATCGTTGTTTTCTGCTCCCCAAATATCATACTTTGAGAGATCAGCATCATCGCCAGAATCTTCATCCTCACTATCATCACCTTTATTATTGCCATTTTCGTCCTCATCATCTTTATCACGAACTCGTGTAACAGAATTGTTACCAAAATTAGACGGGTCATGGTTGTTGGGTTGTTCACTTTGATTTTTCCGAAAACTTTTCTTTTTGCGACGGATTCATCAAACTCATCATTTGAGTCTTTGGGTTCTCTGTATTCAAATACCTCATCGCGCTCCATAAACCCTCCACCATAACCTGTTCTTTCT CCTTGTACGTCGATCTTCGATCCGTTGCACACGTTGCAAGTACTTCGACGT                                                                                                                                                                                                                                                     ]
[-] EMBL CD162136             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GAATCGTTGTTTTCTGCTCCCCAAATATCATACTTTGAGAGATCAGCATCATCGCCAGAATCTTCATCCTCACTATCATCACCTTTATTATTGCCATTTTCGTCCTCATCATCTTTATCACGAACTCGTGTAACAGAATTGTTACCAAAATTAGACGGGTCATGGTTGCTGGGTTGTTAACTTTGATTTT                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD195362             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TGTTCCCCAAAGATCATACTTTGAGAGATCAGCATCATCGCCAGAATCTTCATCCTCACTATCATCACCTTTATTATTGCCATTTTCGTCCTCATCATCTTTATCACGAACTCGCGTAACAGAATTGTTACCAAAATTAGACGGGTCATGGTTGCTGGGTTGTTCACTATGATTTT                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD129743             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        cgtggggCATCATCTCTATCACGAACTCGTGTAACAGAATTGTTACCAAAATTATACGGGTCATGGTTGCTGGGTTGTCTACTATGATTa                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD081207             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ATCATCTGAGTCTCTGCGTTCTCTGTATTCAACTACCTCATCGCGCTCCATAAACCCTCCACCATAACCTGTTCTTTCTACCTTGTACGTCGATCTTCGATCCGTTGCACACGTTGCAAGTACTTCGACG GCGCCAGTTGATATTTCAAACATGTCTTACAAATCCA                                                                                                                                                                                                                ]
[-] EMBL CD134630             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ATCATCTGAGTCTCTGCGTTCTCTGTATTCAACTACCTCATCGCGCTCCATAAACCCTCCACCATAACCTGTTCTTTCT CCTTGTACGTCGATCTTCGATCCGTTGCACACGTTGC                                                                                                                                                                                                                                                                   ]
[-] EMBL CD189508             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ATCATCTGAGTCTCTGCGTTCTCTGTATTCAACTACCTCATCGCGCTCCATAAACCCTCCACCATAACCTGTTCTTTCT CCTTGTACGTCGATCTTCGATCCGTTGCACACGTTGCAAGTACTTCGACGTGC CCAGTTGATATTTC CACATGTCTTACAAATCCAATCATCTGGACTGAAAAGACCTTTGCTTTTTTTCGGCTAGTTGTTTCCCGACCTCTAAACCAGCATTACCTGGGGCCACAAATTTCCTAGGCTTGTCACAGCGGTTGCACTTGTCCCTTTTAGCAAAATTCACATTTTTACATTTCGGATTACTACAAACCCAATCTTCTTTTGATGAGCGAGACATAGATGTGCAGCGTTAACAACT]




>consensus_10727#0
TGTTATTTATTTTAGTAAGCGCGAAATGAACACTGTACATATACACGTAAGTATCCCGGA
TGCAAATTAACTAATGTTACGAATAGTTATGATAACAAGACAACAGGAGAATTATATTCA
GATCCTTTAAAAATAATCATTATTTTAAGAGAAAAACAGGAAATAAATCCTAATGACATA
ACTGCATACACATATACAAAAAAGGGGATAGAATTGCAAAAAGGTGAAGATGACATTGAA
GATTATATATAAAAGAATGAACAATCTACAATGACATCTTTATATTGCAATTTCATTATT
TCGTAGGTAAAGGAGATAGAAAAAAGTATTGTCCTGAATAAGTGTTGTTTTACAGGAGTA
ACCGAACACCAACCGATCGTATTGTTGTTGTCCATTATTGTTTTTTTCGTTTGTGGTTTA
CATGAGTTGAGCTGTCACTATCATTGTCTGCATTTCCGTTGTTAGGATGAGATCTTTTGC
TATTGGATTGACTTTCGGGTTTGGAAGATGCTTCACTGTGGGAACTTGATGATGAGTCAG
AGTGTGAGGTCTGGCTAGAAGATGAAGAAGAATCAGAGTCTGAATCCGAGGAAGATGAGT
GACTATGACTTCGTGATTTGTTTTTTGCAGCTTTTTGTGGAGATGCAGGTTCTCGTTGAT
TTGATAACTCATCACCCGAATCGTTGTTTTCTGCTCCCCAAATATCATACTTTGAGAGAT
CAGCATCATCGCCAGAATCTTCATCCTCACTATCATCACCTTTATTATTGCCATTTTCGT
CCTCATCATCTTTATCACGAACTCGTGTAACAGAATTGTTACCAAAATTAGACGGGTCAT
GGTTGCTGGGTTGTTCACTTTGATTTTTCCGGAAACTTTTCTTTTTGCGACGGATTCATC
AAACTCATCATCTGAGTCTCTGCGTTCTCTGTATTCAACTACCTCATCGCGCTCCATAAA
CCCTCCACCATAACCTGTTCTTTCTCCTTGTACGTCGATCTTCGATCCGTTGCACACGTT
GCAAGTACTTCGACGTGCCCAGTTGATATTTCAACATGTCTTACAAATCCAATCATCTGG
ACTGAAAAGACCTTTGCTTTTTTTCGGCTAGTTGTTTCCCGACCTCTAAACCAGCATTAC
CTGGGGCCACAAATTTCCTAGGCTTGTCACAGCGGTTGCACTTGTCCCTTTTAGCAAAAT
TCACATTTTTACATTTCGGATTACTACAAACCCAATCTTCTTTTGATGAGCGAGACATAG
ATGTGCAGCGTTAACAACT

consensusID : consensus_10727#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 765
fasta sequence

                              [ATGTTATATATTTAGTAAGCGCAATATGAACACTGTACATATACACGTAAGTAGAACGGATGCAAATTAACTAATGTTACGAATAGTTATGATAACAAGACAACAGGAGAATTATATTCAGATCCTTTAAAAATAATCATTATTTTAAGAGAAAAACAGGAAATAAATCCTAATGACATAACTGCATACACATATACAAAAAAGGGGATAGAATTGCAAAAAGGTGAAGATGACATTGAAGATTATATATAAAAGAATGAACAATCTACAATGACATCTTTATATTGCAATTTCATTATTTCGTAGGTAAAGGAGATAGAAAAAAGTATTGT-CCTGAATAAGTGTTGTTTTACAGGAGTAACCGATCGTATTGTTGTTGTCCATTATTGTTTTTTTCGTTTGTGGTTTACATGAGTTGAGCTGTCACTATCATTGTCTGCATTTCCGTTGTTAGGATGAGATCTTTTGCTATTGGATTGACTTTCGGGTTTGGAAGATGCTTCACTGTGGGAACTTGATGATGAGTCAGAGTGTGAGGTCTGGCTAGAAGATGAAGAAGAATCAGAGTCTGAATCCGAGGAAGATGAGTGACTATGACTTCGTGATTTGTTTTTTGCAGCTTTTTGTGGAGATGCAGGTTCTCGTTGA-TTTGATAACTCATCACCCGAATCGTTGTTTTCTGCTCCCCAAATATCATACTTTGAGAGATCAGCATCATCGCCAGAATCTTCATCCTCCCTCGTGCCGAATTNTGGCCTCGGAGGG]

[+] EMBL CD076241             [ATGTTATATATTTAGTAAGCGCAATATGAACACTGTACATATACACGTAAGTAGAACGGATGCAAATTAACTAATGTTACGAATAGTTATGATAACAAGACAACAGGAGAATTATATTCAGATCCTTTAAAAATAATCATTATTTTAAGAGAAAAACAGGAAATAAATCCTAATGACATAACTGCATACACATATACAAAAAAGGGGATAGAATTGCAAAAAGGTGAAGATGACATTGAAGATTATATATAAAAGAATGAACAATCTACAATGACATCTTTATATTGCAATTTCATTATTTCGTAGGTAAAGGAGATAGAAAAAAGTATTGT CCTGAATAAGTGTTGTTTTACAGGAGTAACCGATCGTATTGTTGTTGTCCATTATTGTTTTTTTCGTTTGTGGTTTACATGAGTTGAGCTGTCACTATCATTGTCTGCATTTCCGTTGTTAGGATGAGATCTTTTGCTATTGGATTGACTTTCGGGTTTGGAAGATGCTTCACTGTGGGAACTTGATGATGAGTCAGAGTGTGA                                                                                                                                                                                                                                      ]
[-] EMBL CD082645             [  tgTATATA TTAGTAAGCGCAATATGAACACTGTACATATACACGTAAGTAGAACGGATGCAAATTAACTAATGTTACGAATAGTTATGATAACAAGACAACAGGAGAATTATATTCAGATCCTTTAAAAATAATCA TATTTTAAGAGAAAAACAGGAAATAAATCCTAATGACATAACTGCATACACATATACAAAAAAGGGGATAGAATTGCAAAAAGGTGAAGATGACATTGAAGATTATATATAAAAGAATGAACAATCTACAATGACATCTTTATATTGCAATTTCATTATTTCGTAGGTAAAGGAGATAGAAAAAAGTATTGT CCTGAATAAGTGTTGTTTTACAGGAGTAACCGATCGTATTGTTGTTGTCCATTATTGTTTTTTTCGTTTGTGGTTTACATGAGTTGAGCTGTCACTATCATTGTCTGCATTTCCGTTGTTAGGATGAGATCTTTTGCTATTGGATTGACTTTCGGGTTTGGAAGATGCTTCACTGTGGGAACTTGATGATGAGTCAGAGTGTGAGGTCTGGCTAGAAGATGAAGAAGAATCAGAGTCTGAATCCGAGGAAGATGAGTGACTATGACTTCGTGATTTGTTTTTTGCAGCTTTTTGTGGAGATGCAGGTTCTCGTTGA TTTGATAACTCATCACCCGAATCGTTGTTTTCTGCTCCCCAAATATCATACTTTGAGAGATCAGCATCATCGCCAGAATCTTCATCCTCCCTCGTGCCGAATTNTGGCCTCGGAGGG]
[-] EMBL AW062231             [                                                                                                                                                                                                                                                                                                                            TAGAAAAAAATA TGTCCCTGAAT AGAG TGTTTTACAGGA TAACCGATCGTATTGTTGTTGTCCAATATTG TTTTTTCG TTGTGGGTTACATGAG TGAGCTGTCACTATCA TGTCTGCATTCCCG TGTTAGGAAGAGATATTTTGCTATTGGAATGACTTTCGGGTTTGGAAGATGCTTCACTGTGGGAACTTGATGATGAGTCAGAGTGTGAGGTCTGGCTAGAAGATGAAGAAGAATCAGAGTCTGAATCCGAGGAAGATGAGTGACTATGAATTCGTGATTTGTTTTTTGCAGCTTTTTGTGGAGATGCAGGTTCTCGTTGA TTTGATAACTCATCACCCGAATCGTTGTTTTCTGCTCCCCAAATATCATACTTTGAGAGATCAGCATCATCGCCAGAATCTTCATCCTCACTatcat                    ]
[+] EMBL CD194117             [                                                                                                                                                                                                                                                                                                                                                                ACAGGAGTAACCGATCGTATTGTTGTTGTCCATTATTGTTTTTTTCGTTTGTGGTTTACATGAGTTGAGCTGTCACTATCATTGTCTGCATTTCCGTTGTTAGGATGAGATCTTTTGCTATTGGATTGACTTTCGGGTTTGGAAGATGCTTCACTGTGGGAACTTGATGATGAGTCAGAGTGTGAGGTCTGGCTAGAAGATGAAGAAGAATCAGAGTCTGAATCCGAGGAAGATGAGTGACTATGACTTCGTGATTTGTTTTTTGCAGCTTTTTGTGGAGATGCAGGNTCTCGTTGATTTTGAT ACTCATCACCCGAATCGNTG                                                                                          ]




>consensus_10727#1
ATGTTATATATTTAGTAAGCGCAATATGAACACTGTACATATACACGTAAGTAGAACGGA
TGCAAATTAACTAATGTTACGAATAGTTATGATAACAAGACAACAGGAGAATTATATTCA
GATCCTTTAAAAATAATCATTATTTTAAGAGAAAAACAGGAAATAAATCCTAATGACATA
ACTGCATACACATATACAAAAAAGGGGATAGAATTGCAAAAAGGTGAAGATGACATTGAA
GATTATATATAAAAGAATGAACAATCTACAATGACATCTTTATATTGCAATTTCATTATT
TCGTAGGTAAAGGAGATAGAAAAAAGTATTGTCCTGAATAAGTGTTGTTTTACAGGAGTA
ACCGATCGTATTGTTGTTGTCCATTATTGTTTTTTTCGTTTGTGGTTTACATGAGTTGAG
CTGTCACTATCATTGTCTGCATTTCCGTTGTTAGGATGAGATCTTTTGCTATTGGATTGA
CTTTCGGGTTTGGAAGATGCTTCACTGTGGGAACTTGATGATGAGTCAGAGTGTGAGGTC
TGGCTAGAAGATGAAGAAGAATCAGAGTCTGAATCCGAGGAAGATGAGTGACTATGACTT
CGTGATTTGTTTTTTGCAGCTTTTTGTGGAGATGCAGGTTCTCGTTGATTTGATAACTCA
TCACCCGAATCGTTGTTTTCTGCTCCCCAAATATCATACTTTGAGAGATCAGCATCATCG
CCAGAATCTTCATCCTCCCTCGTGCCGAATTNTGGCCTCGGAGGG

consensusID : consensus_10727#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 434
fasta sequence

                              [TTTTGTTAACAAGGCCACCGGGGAGTTATTTCAGACCCTTAAAAAAAATCCATTATTTTAAGAGAAAAACAGGAAATAAATCCTAATGACATAACTGCATACACATATACAAAAAAGGGGGTAGAATTGCAAAAAGGTGAAGATGACATTGAAGATTATATATAAAAGAGTGAACAATCTACAATGACATCTTTATATTGCAATTCATTATTTCGTAGGTAAAGGAGATAGAAAAAAGTATTGTCCTGAATAAGTGTTGTTTTACAGGAGTAACCTGATAGGTTATTGTTTATAAGTTGAATGCCAATATCATATTAAGCGACACGGAGCGTCGAGATTATATTAGAGATTGGCACTGCTCTCTGTACCGAACACCAACCGATCGTATTGTTGTTGTCCATTATTGTTTTTTTCGTTTGTGGTTTACATGAGTT]

[-] EMBL AW146495             [TTTTGTTAACAAGGCCACCGGGGAGTTATTTCAGACCCTTAAAAAAAATCCATTATTTTAAGAGAAAAACAGGAAATAAATCCTAATGACATAACTGCATACACATATACAAAAAAGGGGGTAGAATTGCAAAAAGGTGAAGATGACATTGAAGATTATATATAAAAGAGTGAACAATCTACAATGACATCTTTATATTGCAATTCATTATTTCGTAGGTAAAGGAGATAGAAAAAAGTATTGTCCTGAATAAGTGTTGTTTTACAGGAGTAACCTGATAGGTTATTGTTTATAAGTTGAATGCCAATATCATATTAAGCGACACGGAGCGTCGAGATTATATTAGAGATTGGCACTGCTCTCTGTACCGAACACCAACCGATCGTATTGTTGTTGTCCATTATTGTTTTTTTCGTTTGTGGTTTACATGAGTT]




>consensus_10727#2
TTTTGTTAACAAGGCCACCGGGGAGTTATTTCAGACCCTTAAAAAAAATCCATTATTTTA
AGAGAAAAACAGGAAATAAATCCTAATGACATAACTGCATACACATATACAAAAAAGGGG
GTAGAATTGCAAAAAGGTGAAGATGACATTGAAGATTATATATAAAAGAGTGAACAATCT
ACAATGACATCTTTATATTGCAATTCATTATTTCGTAGGTAAAGGAGATAGAAAAAAGTA
TTGTCCTGAATAAGTGTTGTTTTACAGGAGTAACCTGATAGGTTATTGTTTATAAGTTGA
ATGCCAATATCATATTAAGCGACACGGAGCGTCGAGATTATATTAGAGATTGGCACTGCT
CTCTGTACCGAACACCAACCGATCGTATTGTTGTTGTCCATTATTGTTTTTTTCGTTTGT
GGTTTACATGAGTT

consensusID : consensus_10727#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 113
fasta sequence

                              [ATTATCTGAGTCTCTGCGTTCTCTGTATTCAACTACCTCATCGCGCTCCATAAACCCTCCACCATAACCTGTTCTTTCTCCTTGTACGTCGACCCCCCATCTATCACAATACC]

[+] EMBL BG930305             [ATTATCTGAGTCTCTGCGTTCTCTGTATTCAACTACCTCATCGCGCTCCATAAACCCTCCACCATAACCTGTTCTTTCTCCTTGTACGTCGACCCCCCATCTATCACAATACC]




>consensus_10727#3
ATTATCTGAGTCTCTGCGTTCTCTGTATTCAACTACCTCATCGCGCTCCATAAACCCTCC
ACCATAACCTGTTCTTTCTCCTTGTACGTCGACCCCCCATCTATCACAATACC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10727#0      TGTTATTTATTTTAGTAAGCGCGAAATGAACACTGTACATATACACGTAAGTATCCCGGA 60
consensus_10727#3      ------------------------------------------------------------
consensus_10727#1      ------------------------------------------------------------
consensus_10727#2      ------------------------------------------------------------
                                                                                   

consensus_10727#0      TGCAAATTAACTAATGTTACGAATAGTTATGATAACAAGACAACAGGAGAATTATATTCA 120
consensus_10727#3      ------------------------------------------------------------
consensus_10727#1      ------------------------------------------------------------
consensus_10727#2      ------------------------------------------------------------
                                                                                   

consensus_10727#0      GATCCTTTAAAAATAATCATTATTTTAAGAGAAAAACAGGAAATAAATCCTAATGACATA 180
consensus_10727#3      ------------------------------------------------------------
consensus_10727#1      ------------------------------------------------------------
consensus_10727#2      ------------------------------------------------------------
                                                                                   

consensus_10727#0      ACTGCATACACATATACAAAAAAGGGGATAGAATTGCAAAAAGGTGAAGATGACATTGAA 240
consensus_10727#3      ------------------------------------------------------------
consensus_10727#1      ------------------------------------------------------------
consensus_10727#2      ------------------------------------------------------------
                                                                                   

consensus_10727#0      GATTATATATAAAAGAATGAACAATCTACAATGACATCTTTATATTGCAATTTCATTATT 300
consensus_10727#3      ------------------------------------------------------------
consensus_10727#1      ------------------------------------------------------------
consensus_10727#2      ------------------------------------------------------------
                                                                                   

consensus_10727#0      TCGTAGGTAAAGGAGATAGAAAAAAGTATTGTCCTGAATAAGTGTTGTTTTACAGGAGTA 360
consensus_10727#3      ------------------------------------------------------------
consensus_10727#1      ------------------------------------------------------------
consensus_10727#2      ------------------------------------------------------------
                                                                                   

consensus_10727#0      ACCGAACACCAACCGATCGTATTGTTGTTGTCCATTATTGTTTTTTTCGTTTGTGGTTTA 420
consensus_10727#3      ------------------------------------------------------------
consensus_10727#1      ------------------------------------------------------------
consensus_10727#2      ------------------------------------------------------------
                                                                                   

consensus_10727#0      CATGAGTTGAGCTGTCACTATCATTGTCTGCATTTCCGTTGTTAGGATGAGATCTTTTGC 480
consensus_10727#3      ------------------------------------------------------------
consensus_10727#1      ------------------------------------------------------------
consensus_10727#2      ------------------------------------------------------------
                                                                                   

consensus_10727#0      TATTGGATTGACTTTCGGGTTTGGAAGATGCTTCACTGTGGGAACTTGATGATGAGTCAG 540
consensus_10727#3      ------------------------------------------------------------
consensus_10727#1      ------------------------------------------------------------
consensus_10727#2      ------------------------------------------------------------
                                                                                   

consensus_10727#0      AGTGTGAGGTCTGGCTAGAAGATGAAGAAGAATCAGAGTCTGAATCCGAGGAAGATGAGT 600
consensus_10727#3      ------------------------------------------------------------
consensus_10727#1      ------------------------------------------------------------
consensus_10727#2      ------------------------------------------------------------
                                                                                   

consensus_10727#0      GACTATGACTTCGTGATTTGTTTTTTGCAGCTTTTTGTGGAGATGCAGGTTCTCGTTGAT 660
consensus_10727#3      ------------------------------------------------------------
consensus_10727#1      ------------------------------------------------------------
consensus_10727#2      ------------------------------------------------------------
                                                                                   

consensus_10727#0      TTGATAACTCATCACCCGAATCGTTGTTTTCTGCTCCCCAAATATCATACTTTGAGAGAT 720
consensus_10727#3      ------------------------------------------------------------
consensus_10727#1      ------------------------------------------------------------
consensus_10727#2      ------------------------------------------------------------
                                                                                   

consensus_10727#0      CAGCATCATCGCCAGAATCTTCATCCTCACTATCATCACCTTTATTATTGCCATTTTCGT 780
consensus_10727#3      ------------------------------------------------------------
consensus_10727#1      ------------------------------------------------------------
consensus_10727#2      ------------------------------------------------------------
                                                                                   

consensus_10727#0      CCTCATCATCTTTATCACGAACTCGTGTAACAGAATTGTTACCAAAATTAGACGGGTCAT 840
consensus_10727#3      ------------------------------------------------------------
consensus_10727#1      ------------------------------------ATGTTATATATTTAGTAAGCGCAA 24
consensus_10727#2      ------------------------------------------------------------
                                                                                   

consensus_10727#0      GGTTGCTGGGTTGTTCACTTTGATTTTTCCGGAAACTTTTCTTTTTGCGACGGATTCATC 900
consensus_10727#3      ------------------------------------------------------------
consensus_10727#1      TATGAACACTGTACATATACACGTAAGTAGAACGGATGCAAATTAACTAATGTTACGAAT 84
consensus_10727#2      ------------------------------------------------------------
                                                                                   

consensus_10727#0      AAACTCATCATCTGAGTCTCTGCGTTCTCTGTATTCAACTACCTCATCGCGCTCCATAAA 960
consensus_10727#3      ------ATTATCTGAGTCTCTGCGTTCTCTGTATTCAACTACCTCATCGCGCTCCATAAA 54
consensus_10727#1      AGTTATGATAACAAGACAACAGGAGAAT-TATATTCAGATCCTTTAAAAATAATCATTAT 143
consensus_10727#2      --TTTTGTTAACAAGGCCACCGGGGAGT-TAT-TTCAGACCCTTAAAAAAAATCCATTAT 56
                                * *       * *     * * * ****    * * *        *** * 

consensus_10727#0      CCCTCCACCATAACCTGTTCTTTCTCCTTGTACGTCGATCTTCGATCCGT-TGCACACGT 1019
consensus_10727#3      CCCTCCACCATAACCTGTTCTTTCTCCTTGTACGTCGACCCCCCATCTAT-CACA-ATAC 112
consensus_10727#1      TTTAAGAGAAAAACAGGAAATAAATCCTAATGACATAACTGCATACACATATACAAAAAA 203
consensus_10727#2      TTTAAGAGAAAAACAGGAAATAAATCCTAATGACATAACTGCATACACATATACAAAAAA 116
                             *  * ***  *   *   ****  *      *      *    *   ** *   

consensus_10727#0      TGCAAGTACTTCGACGTGCCCAGTTGATATTTCAACATGTCTTACAAATCCAATCATCTG 1079
consensus_10727#3      C----------------------------------------------------------- 113
consensus_10727#1      GGGGATAGAATTGCAAAAAGGTGAAGATGACATTGAAGATTATATATAAAAGAATGAACA 263
consensus_10727#2      GGGGGTAGAATTGCAAAAAGGTGAAGATGACATTGAAGATTATATATAAAAGAGTGAACA 176
                                                                                   

consensus_10727#0      GACTGAAAAGACCTTTGCTTTTTTTCGGCTAGTTGTTTCCCGACCTCTAAACCAGCATTA 1139
consensus_10727#3      ------------------------------------------------------------
consensus_10727#1      ATCTACAATGACATCTTTATATTGCAATTTCATTATTTCGTAGGTAAAGGAGATAGAAAA 323
consensus_10727#2      ATCTACAATGACATCTTTATATTGCAATT-CATTATTTCGTAGGTAAAGGAGATAGAAAA 235
                                                                                   

consensus_10727#0      CCTGGGGCCACAAATTTCCTAGGCTTGTCACAGCGGTTGCACTTGTCCCTTTTAGCAAAA 1199
consensus_10727#3      ------------------------------------------------------------
consensus_10727#1      AAGTATTGTCCTGAATAAGTGTTGTTTTACAGGAGTAACCGATCGTATTGTTGTTGTCCA 383
consensus_10727#2      AAGTATTGTCCTGAATAAGTGTTGTTTTACAGGAGTAACCTGATAGGTTATTGTTTATAA 295
                                                                                   

consensus_10727#0      TTCACATTTTTACATTTCGGATTACTACAAACCCAATCTTCTTTTGATGAGCGAGACATA 1259
consensus_10727#3      ------------------------------------------------------------
consensus_10727#1      TT--ATTGTTTTTTTCGTTTGTGGTTTACATGAGTTGAGCTGTCACTATCATTGTCTGCA 441
consensus_10727#2      GTTGAATGCCAATATCATAT-TAAGCGACACGGA--GCGTCGAGATTATATTAGAGATTG 352
                                                                                   

consensus_10727#0      GATGTGCAGCGTTAACAACT---------------------------------------- 1279
consensus_10727#3      ------------------------------------------------------------
consensus_10727#1      TTTCCGTTGTTAGGATGAGATCTTTTGCTATTGGATTGACTTTCGGGTTTGGAAGATGCT 501
consensus_10727#2      GCACTGCTCTCTGTACCGAACACCAACCGATCGTATTGTTGTT---GTCCATTATTGTTT 409
                                                                                   

consensus_10727#0      ------------------------------------------------------------
consensus_10727#3      ------------------------------------------------------------
consensus_10727#1      TCACTGTGGGAACTTGATGATGAGTCAGAGTGTGAGGTCTGGCTAGAAGATGAAGAAGAA 561
consensus_10727#2      TTTTCGTTTGTGGTTTAC-ATGAGTT---------------------------------- 434
                                                                                   

consensus_10727#0      ------------------------------------------------------------
consensus_10727#3      ------------------------------------------------------------
consensus_10727#1      TCAGAGTCTGAATCCGAGGAAGATGAGTGACTATGACTTCGTGATTTGTTTTTTGCAGCT 621
consensus_10727#2      ------------------------------------------------------------
                                                                                   

consensus_10727#0      ------------------------------------------------------------
consensus_10727#3      ------------------------------------------------------------
consensus_10727#1      TTTTGTGGAGATGCAGGTTCTCGTTGATTTGATAACTCATCACCCGAATCGTTGTTTTCT 681
consensus_10727#2      ------------------------------------------------------------
                                                                                   

consensus_10727#0      ------------------------------------------------------------
consensus_10727#3      ------------------------------------------------------------
consensus_10727#1      GCTCCCCAAATATCATACTTTGAGAGATCAGCATCATCGCCAGAATCTTCATCCTCCCTC 741
consensus_10727#2      ------------------------------------------------------------
                                                                                   

consensus_10727#0      ------------------------
consensus_10727#3      ------------------------
consensus_10727#1      GTGCCGAATTNTGGCCTCGGAGGG 765
consensus_10727#2      ------------------------