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Schistosoma mansoni
cluster # 10731 cluster # 10731       Sequences # 20       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10731#0 length = 924 sequences # 8  
consensus_10731#1 length = 794 sequences # 11  
consensus_10731#2 length = 290 sequences # 1  

consensusID : consensus_10731#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 924
fasta sequence
                              [ANAATGCGGCACGAGGCACGTCCCTGTATACAATGCAGCATCACCTAGCCCATTACTTAATTTTGAACGTTACAATGTTGATGACCTAGAAAATGTCACGTATATCAAACTGGATCCTAACAAAGGTCCAATGATAGATAAAGAAGGACCAATTTATATG-TTTTTTTCAAGGCAGAAAAATAATCACAGTGAGCCAAATCTTTACAATAATTACGTTAATCATGATTCACCAACTTGGGATAGAAGAACTAAAAACTCTAATGTAATGTATTCACCATGATAAAATAAAATAAAACTCTAATGAATAGTATCCTAGATTTTGATTTCCATCATAAAGATTCACTAGCTTCCATACATGCACAACTACGAATATAACATACAATGATGAAATTAACTGAAGAATTCCACTTCTTTGATTACAGTATACAATTAATTTACAGCTTTACCTACTTGTTTGATACTATTGTAGCTTCGTGCTTCCTTTACTTAAAAAAAATTAGACATAATGTTTTCGTTTCGATTATTTAGTACAAATTTATTAGTCATACTCAGGTTAGTAAAATTGTTGCTGCTCAAAATTCT-GTGTTTAT-TTTCTCAAATTTTCTTTTTTTTAAAAAAAATCTTTTCGTTATTCATATATCATTATGAAATTTGTTTATCTACGGAAGTGGATCAATAAATTTCATTATGATTTTG-TTTATTTCTAAACAACATTAT-GTCAGATATTGTGTTGCTACAGTGA-TTAGTAAAT-ATGTAGTCATCC-TACATTNCAT-AG-TTATGCTTTAGACA--TAATGAT-TNTATATATATAATGC-TTTTATATATGGGATACATA-TTCAT-AAGA-TAGCCATTTA-TATTGATT-CG-TTTANTA-TACCAA--GATG-ATGGAT-AT-TATATTG-TTA-TAT-CT-ACGG-AACATATATATATATATGT]

[+] EMBL CD081293             [ANAATGCGGCACGAGGCACGTCCCTGTATACAATGCAGCATCACCTAGCCCATTACTTAATTTTGAACGTTACAATGTTGATGACCTAGAAAATGTCACGTATATCAAACTGGATCCTAACAAAGGTCCAATGATAGATAAAGAAGGACCAATTTATATG TTTTTTTCAAGGCAGAAAAATAATCACAGTGAGCCAAATCTTTACAATAATTACGTTAATCATGATTCACCAACTTGGGATAGAAGAACTAAAAACTCTAATGTAATGTATTCACCATGATAAAATAAAATAAAACTCTAATGAATAGTATCCTAGATTTTGATTTCCATCATAAAGATTCACTAGCTTCCATACATGCACAACTACGAGTATAACATACAATGATGAAATTAACTGAAGAATTCCACTTCTTTGATTACAGTATACAATTAATTTACAGCTTTACCTACTTGTTTGATACTATTGTAGCTTCGTGCTTCCTTTACTTAAAAAAAATTAGACATAATGTTTTCGTTTCGATTATTTAGTACAAATTTATTAGTCATACTCAGGTTAGTAAAATTGTTGCTGCTCAAAATTCT GTGTTTAT TTTCTCAAATTTTCTTTTTTTTAAAAAAAATCTTTTCGTTATTCATATATCATTATGAAATTTGTTTATCTACGGAAGTGGATCAAT AATTTCATTATGATTNTG TTTATTTCTAAAC ACATTAT GTCAGATATTGTNGTGCTACAGTGA TTAGTAAAT ATGTAGTCATCC TACATTNCAT AG TTATGCTTTAGACA  TAATGAT TNTATATATATAATGC TTTTATATATGGGATACATA TTCAT AAGA TAGCCATTTA TATTGATT CG TTTANTA TACCAA  GATG ATGGAT AT TATATTG TTA TAT CT ACGG AACATATAT          ]
[+] EMBL CD064827             [                       CTGTATACAATGCAGCATCACCTAGCCCATTACTTAATTTTGAACGTTACAATGTTGATGACCTAGAAAATGTCACGTATATCAAACTGGATCCTAACAAAGGTCCAATGATAGATAAAGAAGGACCAATTTATATGTTTTTTTTCAAGGCAGAAAAATAATCACAGTGAGCCAAATCTTTACAATAATTACGTTAATCATGATTCACCAACTTGGGATAGAAGAACTAAAAACTCCAATGTAATGTATTCACCATGATAAAATAAAATAAAACTCTAATGAATAGTATCCTAGATTTTGATTTCCATCATAAAGATTCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD137305             [                                                                                                                                                                                                                                                                                            AATAAAATCAAACTCTAATGAATAGTATCCTAGATTTTGATTTCCATCATAAAGATTCACTAGCTTCCATACATGCACAACTACGAATATAACATACAATGATGAAATTAACTGAAGAATTCCACTTCTTTGATTACAGTATACAATTAATTTACAGCTTTACCTACTTGTTTGATACTATTGTAGCTTCGTGCTTCCTTTACTTAAAAAAAATTAGACATAATGTTTTCGTTTCGATTATTTAGTACAAATGTATTAGTCATACTCAGGTTAGTAAAATTGTTGCTGCTCAAAATTCT GTGTTTAT TTTCTCGAATTTTCTTTTTTGTAAAAAAAATCTTTTCGTTATTCATATATCATTATGAAATTTGTTTATCTACGGAAGTGGATCAATAAATTTCATTATGATTTTG TTTATGTCTAAACAACATTA                                                                                                                                                                                                                                           ]
[+] EMBL CD136810             [                                                                                                                                                                                                                                                                                                                                                         ccCTT CATACATGCACAACTACGAATATAACATACAATGATGAAATTAACTGAAGAATTCCACTTCTTTGATTACAGTATACAATTAATTTACAGCTTTACCTACTTGTTTGATACTATTGTAGCTTCGTGCTTCCTTTACTTAAAAAAAATTAGACATAATGTTTTCGTTTCGATTATTTAGTACAAATTTATTAGTCATACTCAGGTTAGTAAAATTGTTGCTGCTCAAAATTCT GTGTTTAT TTTCTCAAATTTTCTTTTTTTTAAAAAAAATCTTTTCGTTATTCATATATCATTATGAAATTTGTTTATCTACGGAAGTGGATCAATAAATTTCATTATGATTTTG TTTATTTCTAAACAACATTA                                                                                                                                                                                                                                           ]
[+] EMBL SMAA14068            [                                                                                                                                                                                                                                                                                                                                                                                        CATACAATGATGAAATTAACTGAAGAATTCCACTTCTTTGATTACAGTATACAATTAATTTACAGCTTTACCTACTTGTTTGATACTATTGTAGCTTCGTGCTTCCTTTACTTAANAAAAATTAGACATAATNTTTTCGTTTCGATTATTTAGTACAAATTTATTAGTCATACTCAGGTTAG                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD075123             [                                                                                                                                                                                                                                                                                                                                                                                                                aatTTCCACTTCTTTGATTACAGTATACAATTAATTTACAGCTTTACCTACTTGTTTGATACTATTGTAGCTTCGTGCTTCCTTTACTTAAAAAAAATTAGACATAATGTTTTCGTTTCGATTATTTAGTACAAATTTATTAGTCATACTCAGGTTAGTAAAATTGTTGCTGCTCAAAATTCT GTGTTTAT TTTCTCAAATTTTCTTTTTTTTAAAAAAAATCTTTTCGTTATTCATATATCATTATGAAATTTGTTTATCTACGGAAGTGGATCAATAAATTTCATTATGATTTTG TTTATTTCTAAACAACATTAT GTCAGATATTGTGTTGCTACAGTGA TTAGTAAATAATGTAGTCATCCTTACATT CATAAGTTTATGC TTAGACAATTAATGATATATATATATATAATGCTTTTTATATAT GGATACATATTTCATAAAGATTAGCCATTTATTATTGATTCCGTTTTATTATTACCAAAGGATGTATGGATAATATATATTGTTTATTATACTCACGGTAATACATAAATATATATGT]
[+] EMBL SMAA69218            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TAGACATAATGTTTTCGTTTCGATTATTTAGTACAAATTTATTAGTCATACTCAGGTTAGTAAAATTGTTGCTGCTCAAAATTCTCGCGTTTATACTAGTCAAATTTTCTTTTT                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AA883014             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AAAATTCT GTGTTTAT TTTCTCAAATTTTCTTTTTTTTAAAAAAAATCTTTTCGTTATTCATATATCATTATGAAATTTGTTTATCTACGGAAGTGGATCAATAAATTTCATTATGATTTTGATTTATTTCTAAACAACATTATAGTCAGATATTGTGTTGC ACAGTGATTTAG AAAT AAGTAGTCATCC T                                                                                                                                                                                       ]


>consensus_10731#0 ANAATGCGGCACGAGGCACGTCCCTGTATACAATGCAGCATCACCTAGCCCATTACTTAA TTTTGAACGTTACAATGTTGATGACCTAGAAAATGTCACGTATATCAAACTGGATCCTAA CAAAGGTCCAATGATAGATAAAGAAGGACCAATTTATATGTTTTTTTCAAGGCAGAAAAA TAATCACAGTGAGCCAAATCTTTACAATAATTACGTTAATCATGATTCACCAACTTGGGA TAGAAGAACTAAAAACTCTAATGTAATGTATTCACCATGATAAAATAAAATAAAACTCTA ATGAATAGTATCCTAGATTTTGATTTCCATCATAAAGATTCACTAGCTTCCATACATGCA CAACTACGAATATAACATACAATGATGAAATTAACTGAAGAATTCCACTTCTTTGATTAC AGTATACAATTAATTTACAGCTTTACCTACTTGTTTGATACTATTGTAGCTTCGTGCTTC CTTTACTTAAAAAAAATTAGACATAATGTTTTCGTTTCGATTATTTAGTACAAATTTATT AGTCATACTCAGGTTAGTAAAATTGTTGCTGCTCAAAATTCTGTGTTTATTTTCTCAAAT TTTCTTTTTTTTAAAAAAAATCTTTTCGTTATTCATATATCATTATGAAATTTGTTTATC TACGGAAGTGGATCAATAAATTTCATTATGATTTTGTTTATTTCTAAACAACATTATGTC AGATATTGTGTTGCTACAGTGATTAGTAAATATGTAGTCATCCTACATTNCATAGTTATG CTTTAGACATAATGATTNTATATATATAATGCTTTTATATATGGGATACATATTCATAAG ATAGCCATTTATATTGATTCGTTTANTATACCAAGATGATGGATATTATATTGTTATATC TACGGAACATATATATATATATGT



consensusID : consensus_10731#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 794
fasta sequence
                              [ACTTTTAAATAGAAATGAAAACAAAACGTTCTACTAGTGGAGTACGTAATTCTGAACCGATTGACGATATATTACGTCATGTGGGAACCAAACAATATCTGTTTTTAGAAACACATATTTGTACAATTTATCGAGTAACATGTGCACCTGGAGAAAAATTTAGTGAATCAAAAGCATTATCA-TTAATAGAGAAATATCATCGTAAAAGACAATCACATTGTAATGCTGGTTTATTGGAAGATCGATTTAGTTTGGAACGTACAAAAACTACTGGAAAAATACCATTTCGTCCATGGGTATCATATAAAGAAATTATGCATTTCTATGTAAGTCATTCTAGACCGGAATTCTTTGCATTGTGTATTGATTCACAACGAAGTTTACAAAAATATTATGAAATATACAAATGTAAGAGTGCAGCAAATGTTAGAA-AAGTTGAGGAATTAATGAGACGTGCAATGAATGATCCAGAC-AAAAAATTACATGATGTTAATGCACTAAGACAAGTGGCGGTGAAAGATAGTGATCGAATACGTTCCCTGCCAAATTTTGAAGAAGAAAATGTACGTGATACTATGGTTGAAGATAGATCTCCCTCACCACCATATCAGTATCCATCACCACCACCAGTACGTCAGTTACCTTCTCCTGTGATGGTAGCCCCTGTAAGACAAGTCCCTGTATACAATGCAGCATCACCTAGCCCATTACTTAATTTTGAACGTTACAATGTTGATGACCTAGAAAATGTCACGTATATCAAACTGGATCCTAACAAAGGTCCAATGATAGAT]

[-] EMBL CD140730             [ACTTTTAAATAGAAATGAAAACAAAACGTTCTACTAGTGGAGTACGTAATTCTGAACCGATTGACGATATATTACGTCATGTGGGAACCAAACAATATCTGTTTTTAGAAACACATATTTGTACAATTTATCGAGTAACATGTGCACCTGGAGAAAAATTTAGTGAATCAAAAGCATTATCA TTAATAGAGAAATATCATCGTAAAAGACAATCACATTGTAATGCTGGTTTATTGGAAGATCGATTTAGTTTGGAACGTACAAAGACTACTGGAAAAATACCATTTCGTCCATGGGTATCATATAAAGAAATTATGCATTTCTATGTAAGTCATTCTAGACCGGAATTCTTTGCATTGTGTATTGATTCACAACGAAGTTTACAAAAATATTATGAAATATACAAATGTAAGAGTGCAGCAAATGTTAGAA AAGTTGAGGAATTAATGAGAC                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD140714             [                                       GAGTACGTAATTCTGAACCGATAGACGATATATTACGTCATGTGGGAACCAAACAATATCTGTTTTTAGAAACACATATTTGTACAATTTATCGAGTAACATGTGCACCTGGAGAAAAATTTAGTGAATCAAAAGCATTATCA TTAATAGAGAAATATCATCGTAAAAGACAATCACATTGTAATGCTGGTTTATTGGAAGATCGATTTAGTTTGGAACGTACAAAAACTACTGGAAAAATACCATTTCGTCCATGGGTATCATATAAAGAAATTATGCATTTCTATGTAAGTCATTCTAGACCGGAATTCTTTGCATTGTGTATTGATTCACAACGAAGTTTACAAAAATATTATGAAATATACAAATGTAAGAGTGCAGCAAATGTTAGAA AAGTTGAGGAATTAATGAGAC                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD177726             [                                                                                                                                                         AAAAATTTAGTGAATCAAAAGCATTATCA TTAATAGAGAAATATCATCGTAAAAGACAATCACATTGTAATGCTGGTTTATTGGAAGATCGATTTAGTTTGGAACGTACAAAAACTACTGGAAAAATACCATTTCGTCCATGGGTATCATATAAAGAAATTATGCATTTCTATGTAAGTCATTCTAGACCGGAATTCTTTGCATTGTGTATTGATTCACAACGAAGTTTACANAAATATTATGAAATATACAAATGTAAGAGTGCAGCAAATGTTAGAANAAG TGAGGAAT                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD194714             [                                                                                                                                                               TTAGTGAATCAAAAGCATTATCA TTAATAGAGAAATATCATCGTAAAAGACAATCACATTGTAATGCTGGTTTATTGGAAGATCGATTTAGTTTGGAACGTACAAAAACTACTGGAAAAATACCATTTCGTCCATGGGTATCATATAAAGAAATTATGCATTTCTATGTAAGTCATTCTAGACCGGAATTCTTTGCATTGTGTATTGATTCACAACGAAGTTTACAAAAATATTATGAAATATACAAATGTAAGAGTGCAGCAAATGTTAGAA AAGTTGAGGAATTAATGAGACGTGCAATGAATGATCCAGAC AAAAAATTACATGATGTTAATGCACTAAGACAAGTGGCGGTGAAAGATAGTGATCGAATACGTTCCCTGCCAAATTTTGAAGAAGAAAATGTACGTGATACTATGGTTGAAGATAGATCTCCCTCACCACCATATCAGTATCCATCACCACCACCAGTACGTCAGTTACCTTCTCCTGTGATGGTAGCCCCTGTAAGTCAAGTCCCT                                                                                                                  ]
[-] EMBL CD200723             [                                                                                                                                                                TAGTGAATCAAAAGCA TATCATTTAATAGAGAAATATCATCGTAAAAGACAATCACATTGTAATGCTGGTTTATTGGAAGATCGATTTAGTTTGGAACGTACAAAAACTACTGGAAAAATACCATTTCGTCCATGGGTATCATATAAAGAAATTATGCATTTCTATGTAAGTCATTCTAGACCGGAATTCTTTGCATTGTGTATTGATTCACAACGAAGTTTACAAAAATATTATGAAATATACAAATGTAAGAGTGCAGCAAATGTTAGAA AAGTTGAGGAATTAATGAGACGTGCAATGAATGATCCAGAC AAAAAGTTACATGATGTTAATGCACTAAGACAAGTGGCGGTGAAAGATAGTGATCGAATACGTTCCCTGCCAAATTTTGAAGAAGAAAATGTACGTGATACTATGGTTGAAGATAGATCTCCCTCACCACCATATCAGTATCCATCACCACCACCAGTACGTCAGTTACCTTCTCCTGTGATGGTAGCCCCTGTAAGACAAGTCCCTGTATACAAT                                                                                                         ]
[-] EMBL CD189943             [                                                                                                                                                                 AGTGAATCAAAAGCATTATCA TTAATAGAGAAATATCATCGTAAAAGACAATCACATTGTAATGCTGGTTTATTGGAAGATCGATTTAGTTTGGAACGTACAAAAACTACTGGAAAAATACCATTTCGTCCATGGGTATCATATAAAGAAATTATGCATTTCTATGTAAGTCATTCTAGACCGGAATTCTTTGCATTGTGTATTGATTCACAACGAAGTTTACAAAAATATTATGAAATATACAAATGTAA                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD070000             [                                                                                                                                                                                                                 ACAATCACATTGTAATGCTGGTTTATTGGAAGATCGATTTAGTTTGGAACGTACAAAAACTACTGGAAAAATACCATTTCGTCCATGGGTATCATATAAAGAAATTATGCATTTCTATGTAAGTCATTCTAGACCGGAATTCTTTGCATTGTGTATTGATTCACAACGAAGTTTACAAAAATATTATGAAATATACAAATGTAAGAGTGCAGCAAATGTTAGAA AAGTTGAGGAATTAATGAGACGTGCAATGAATGATCCAGAC AAAAAATTACATGATGTTA                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD200589             [                                                                                                                                                                                                                                                                         AAACTACTGGAAAAATACCATTTCGTCCATGGGTATCATATAAAGAAATTATGCATTTCTATGTAAGTCATTCTAGACCGGAATTCTTTGCATTGTGTATTGATTCACAACGAAGTTTACAAAAATATTATGAAATATACAAATGTAAGAGTGCAGCAAATGTTAGAA AAGTTGAGGAATTAATGAGACGTGCAATGAATGATCCAGACAAAAAAATTACATGATGTTAATGCACTAAGACAAGTGGCGGTGAAAGATAGTGATCGAATACGTTCCCTGCCAAATTTTGAAGAAGAAAATGTACGTGATACTATGGTTGAAGATAGATCTCCCTCACCACCATATCAGTATCCATCACCACCACCAGTACGTCAGTTACCTTCTCCTGTGATGGTAGCCCCTGTAAGACAAGTCCCTGTATACAA                                                                                                          ]
[+] EMBL CD130381             [                                                                                                                                                                                                                                                                                 GGAAAAATACCATTTCGTCCATGGGTATCATATAAAGAAATTATGCATTTCTATGTAAGTCATTCTAGACCGGAATTCTTTGCATGGTGTATTGATTCACAACGAAGTTTACAAAAATATTATGAAATATACAAATGTAAGAGCGCAGCAAATG                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD140837             [                                                                                                                                                                                                                                                                                                                ATAAAGAAATTATGCATTTCTATGTAAGTCATTCTAGACCGGAATTCTTTGCATTGTGTATTGATTCACAACGAAGTTTACAAAAATATTATGAAATATACAAATGTAAGAGTGCAGCAAATGTTAGAA AAGTTGAGGAATTAATGAGACGTGCAATGAATGATCCAGAC AAAAAATTACATGATGTTAATGCACTAAGACAAGTGGCGGTGAAAGATAGTGATCGAATACGTTCCCTGCCAAATTTTGAAGAAGAAAATGTACGTGATACTATGGTTGAAGATAGATCTCCCTCACCACCATATCAGTATCCATCACCACCACCAGTACGTCAGTTACCTTCTCCTGTGATGGTAGCCCCTGTAAGACAAGTCCCTGTATACAATGCAGCATCACCTAGCCCATTACTTAATTTTGAACGTTACAATGTTGATGACCTAGAAAATGTCACGTATATCAAACTGGATCCTAACAAAGGTCCAATGATAGAT]
[+] EMBL CD197591             [                                                                                                                                                                                                                                                                                                                         TTATGCATTTCTATGTAAGTCATTCTAGACCGGAATTCTTTGCATTGTGTATTGATTCACAACGAAGTTTACAAAAATATTATGAAATATACAAATGTAAGAGTGCAGCAAATGTTAGAA AAGTTGAGGAATTAATGAGACGTGCAATGAATGATCCAGAC AAAAAATTACGTGATGTTAATGCACTAAGACAAGTGGCGGTGAAAGATAGTGATCGAATACGTTCCCTGCCAAATTTTGAAGAAGAAAATGTACGTGATACTATGGTTGAAGATAGATCTCCCTCACCACCATATCAGTATCCATCACCACCACCAGTACGTCAGTTACCTTCTCCTGTGATGGTAGCCCCTGTAAGACA                                                                                                                         ]


>consensus_10731#1 ACTTTTAAATAGAAATGAAAACAAAACGTTCTACTAGTGGAGTACGTAATTCTGAACCGA TTGACGATATATTACGTCATGTGGGAACCAAACAATATCTGTTTTTAGAAACACATATTT GTACAATTTATCGAGTAACATGTGCACCTGGAGAAAAATTTAGTGAATCAAAAGCATTAT CATTAATAGAGAAATATCATCGTAAAAGACAATCACATTGTAATGCTGGTTTATTGGAAG ATCGATTTAGTTTGGAACGTACAAAAACTACTGGAAAAATACCATTTCGTCCATGGGTAT CATATAAAGAAATTATGCATTTCTATGTAAGTCATTCTAGACCGGAATTCTTTGCATTGT GTATTGATTCACAACGAAGTTTACAAAAATATTATGAAATATACAAATGTAAGAGTGCAG CAAATGTTAGAAAAGTTGAGGAATTAATGAGACGTGCAATGAATGATCCAGACAAAAAAT TACATGATGTTAATGCACTAAGACAAGTGGCGGTGAAAGATAGTGATCGAATACGTTCCC TGCCAAATTTTGAAGAAGAAAATGTACGTGATACTATGGTTGAAGATAGATCTCCCTCAC CACCATATCAGTATCCATCACCACCACCAGTACGTCAGTTACCTTCTCCTGTGATGGTAG CCCCTGTAAGACAAGTCCCTGTATACAATGCAGCATCACCTAGCCCATTACTTAATTTTG AACGTTACAATGTTGATGACCTAGAAAATGTCACGTATATCAAACTGGATCCTAACAAAG GTCCAATGATAGAT



consensusID : consensus_10731#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 290
fasta sequence
                              [TCATACTCAGGTTAGTAAAATTGTTGCTGCTCAAAATTCTGTGTTTATTTCCTCAAATTTCCTTTTTTTTAAAAAAAATCTTTCCGTTATNCATATATCATTATGAAATTTGTTTATCTACGGAAGTGGATCAATAAATTNCATTATGATTTNGTTTATTNCTAAACAACATTATGTCAGATATTGTGTTGCTACAGTGATTAGTAAATAATGTAGTCANCCTTACATNCATAAGTTTATGCTTAGACAATTAATGATATATATATATATATAATGGCTTTTTATATNTG]

[+] EMBL AA559551             [TCATACTCAGGTTAGTAAAATTGTTGCTGCTCAAAATTCTGTGTTTATTTCCTCAAATTTCCTTTTTTTTAAAAAAAATCTTTCCGTTATNCATATATCATTATGAAATTTGTTTATCTACGGAAGTGGATCAATAAATTNCATTATGATTTNGTTTATTNCTAAACAACATTATGTCAGATATTGTGTTGCTACAGTGATTAGTAAATAATGTAGTCANCCTTACATNCATAAGTTTATGCTTAGACAATTAATGATATATATATATATATAATGGCTTTTTATATNTG]


>consensus_10731#2 TCATACTCAGGTTAGTAAAATTGTTGCTGCTCAAAATTCTGTGTTTATTTCCTCAAATTT CCTTTTTTTTAAAAAAAATCTTTCCGTTATNCATATATCATTATGAAATTTGTTTATCTA CGGAAGTGGATCAATAAATTNCATTATGATTTNGTTTATTNCTAAACAACATTATGTCAG ATATTGTGTTGCTACAGTGATTAGTAAATAATGTAGTCANCCTTACATNCATAAGTTTAT GCTTAGACAATTAATGATATATATATATATATAATGGCTTTTTATATNTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10731#0      ANAATGCGGCACGAGGCACGTCCCTGTATACAATGCAGCATCACCTAGCCCATTACTTAA 60
consensus_10731#2      ------------------------------------------------------------
consensus_10731#1      ----------------------------------------------------------AC 2
                                                                                   

consensus_10731#0      TTTTGAACGTTACAATGTTGATGACCTAGAAAATGTCACGTATATCAAACTGGATCCTAA 120
consensus_10731#2      ------------------------------------------------------------
consensus_10731#1      TTTTAAATAGAAATGAAAACAAAACGTTCTACTAGTGGAGTACGTAATTCTGAA-CCGAT 61
                                                                                   

consensus_10731#0      CAAAGGTCCAATGATAGATAAAGAAGGACCAATTTATATGTTTTTTTCAAGGCAGAAAAA 180
consensus_10731#2      ------------------------------------------------------------
consensus_10731#1      TGACGATATATTACGTCATGTGGGAACCAAACAATATCTGTTTTTAGAAACACATATTTG 121
                                                                                   

consensus_10731#0      TAATCACAGTGAGCCAAATCTTTACAATAATTACGTTAATCATGATTCACCAACTTGGGA 240
consensus_10731#2      ------------------------------------------------------------
consensus_10731#1      TACAATTTATCGAGTAACATGTGCACCTGGAGAAAAATTTAGTGAATCAAAAGCATTATC 181
                                                                                   

consensus_10731#0      TAGAAGAACTAAAAACTCTAATGTAATGTATTCACCATGATAAAATAAAATAAAACTCTA 300
consensus_10731#2      ------------------------------------------------------------
consensus_10731#1      ATTAATAGAGAAATATCATCGTAAAAGACAATCACATTGTAATGCTGGTTTATTGGAAGA 241
                                                                                   

consensus_10731#0      ATGAATAGTATCCTAGATTTTGATTTCCATCATAAAGATTCACTAGCTTCCATACATGCA 360
consensus_10731#2      ------------------------------------------------------------
consensus_10731#1      TCGATTTAGTTTGGAACGTACAAAAACTACTGGAAAAATACCATTTCGTCCATGGGTAT- 300
                                                                                   

consensus_10731#0      CAACTACGAATATAACATACAATGATGAAATTAACTGAAGAATTCCACTTCTTTGATTAC 420
consensus_10731#2      ------------------------------------------------------------
consensus_10731#1      CATATAAAGAAATTATGCATTTCTATGTAAGTCATTCTAGACCGGAATTCTTTGCATTGT 360
                                                                                   

consensus_10731#0      AGTATACAATTAATTTACAGCTTTACCTACTTGTTTGATACTATTGTAGCTTCGTGCTTC 480
consensus_10731#2      ------------------------------------------------------------
consensus_10731#1      GTATT--GATTCACAACGAAGTTTACAAAAATATTATGAAATATACAAATGTAAGAGTGC 418
                                                                                   

consensus_10731#0      CTTTACTTAAAAAAAATTAGACATAATGTTTTCGTTTCGATTATTTAGTACAAATTTATT 540
consensus_10731#2      ------------------------------------------------------------
consensus_10731#1      AGCAAATGTTAGAAAAGTTGAGGAATTAATGAGACGTGCAATGAATGATCCAGACAAAAA 478
                                                                                   

consensus_10731#0      AGT-CATACT--CAGGTTAGTAAAATTGTTGCTGCTCAAAATTCTGTGTTTATTTTCTCA 597
consensus_10731#2      --T-CATACT--CAGGTTAGTAAAATTGTTGCTGCTCAAAATTCTGTGTTTATTTCCTCA 55
consensus_10731#1      ATTACATGATGTTAATGCACTAAGACAAGTGGCGGTGAAAGATA-GTGATCGAATACGTT 537
                         * ***  *   *    * *** *    **  * * ***  *  *** *    * *   

consensus_10731#0      AATTTTCTTTTTTTTAAAAAAAATCTTTTCGTTATTC-ATATATCATTATGAAATTTGTT 656
consensus_10731#2      AATTTCCTTTTTTTTAAAAAAAATCTTTCCGTTATNC-ATATATCATTATGAAATTTGTT 114
consensus_10731#1      CCCTGCCAAATTTTGAAGAAGAAAATGTACGTGATACTATGGTTGAAGATAGATCTCCCT 597
                          *  *   **** ** ** **  * * *** ** * **   * *  **  *  *   *

consensus_10731#0      TATCTACGGAAGTGGATCAATAAATTTCATTATGATTTTGTTTATTTCTAAACAACATTA 716
consensus_10731#2      TATCTACGGAAGTGGATCAATAAATTNCATTATGATTTNGTTTATTNCTAAACAACATTA 174
consensus_10731#1      CACCACCATATCAGTATCCATCA---CCACCACCAGTACGTCAGTTACCTTCTCCTGTGA 654
                        * *  *  *   * *** ** *    **  *  * *  **   ** *         * *

consensus_10731#0      TGTCAGATATTGTGTTGCTACAGTGATTAGTAAATA-TGTAGTCATCCT-ACATTNCATA 774
consensus_10731#2      TGTCAGATATTGTGTTGCTACAGTGATTAGTAAATAATGTAGTCANCCTTACATNCATAA 234
consensus_10731#1      TGGTAGCCCCTGTAA---GACAAGTCCCTGTATACAATGCAG-CATCACCTAGCCCATTA 710
                       **  **    ***      ***       *** * * ** ** ** *            *

consensus_10731#0      GTTATGCTTTAGACA--TAATGAT---TNT-ATATATATAATGCTTTTATATATGGGATA 828
consensus_10731#2      GTTTATGCTTAGACAATTAATGATATATAT-ATATATATAATGGCTTTTTATATNTG--- 290
consensus_10731#1      CTTAAT-TTTGAACG--TTACAATGTTGATGACCTAGAAAATG-TCACGTATATCAAACT 766
                        **     **  **   * *  **     * *  ** * ****      *****      

consensus_10731#0      CATATTCATAAGATAGCCATTTATATTGATTCGTTTANTATACCAAGATGATGGATATTA 888
consensus_10731#2      ------------------------------------------------------------
consensus_10731#1      GGATCCTAACAAAGGTCCAATGATAGAT-------------------------------- 794
                                                                                   

consensus_10731#0      TATTGTTATATCTACGGAACATATATATATATATGT 924
consensus_10731#2      ------------------------------------
consensus_10731#1      ------------------------------------
                                                           




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)