cluster # 10738

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 10738 cluster # 10738 Sequences # 20 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10738#0 length = 1132 sequences # 12
consensus_10738#1 length = 547 sequences # 4

consensus_10738#2 length = 325 sequences # 2
consensus_10738#3 length = 133 sequences # 2

consensusID : consensus_10738#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 1132
fasta sequence

                              [CATTTTAACTACACCGTGGTACATTCGACTGGAAGTGATTCGGTGTGTTGTTACGTTACTTCGTTAAGTTGGATGCTTGGAAATGGGGGATTTTCAGAGTTTTAAGTTCGAGAATTCTATACCGGATTTATGTCCTGAAACACAGCTGAACTTTAGAAAGTTTCTTCAAGCTGCTGGGATTGAAAACATGTTAATTAAAGATGGCCGGAGAATATCAGATACCGAGGTACTAAATGAAATCAGGAAAGAGGTTGCTGTGTTGTCTATGAATGACGATGATGGGCGGACCTCGTCGCTGATTCTTGCGTGTATCAACGGTGACGATGAAGCTGCTAAACTGCTCATTCTTTCGGAAACTGCACTGACGTGTGCCATATCCTCGAATGCTGTGCGGATTGTGGAGATGTTGTTAAAACATGGGTCTGATCCAAACTTTCGTGGTAAGAAAGTTGAGTGCACCCCATTGATGGAAGCTGCCAGTGTTGGCTATACTGATATTGTGAAGTTGCTGTTGGAGCATGGAGCATGTGTTGCCCAAAAATCAAACACAGGAAATACTGCACTACATTATGCTGCTACTTCCGGTCACTTGGAGTGTGTTTGTCTTTTGCTACAGTACAATAGCCCAATGGAAGTTCAAAATGATACGGGTCATACACCTTTAATGGAAGCTACAAGTAACGGGCACGTAGACGTCG-CTCGTTGCCTTATAAAACATGGATGCGATATTAACACACATTCAGCG-GAGTTCAAGGAATCCGCACTAACTCTGGCAAGCTACAAAGGTCATGCGGAAATGGTCCGTTTCCTGTTGACTGCAGGAGCCGATCACGAACATCGTACTGATGAAATGCACACTGCTCTGATGGAAGCTGCAATGGAAGGTCAGGGCGAAGTTGCTCGATTACTCCTTGCTCATGGCGCGAATGTGAACATACCACAAGATAGTTTTGAGTCCCCTCTAACCTTGGCTGCTTGTGGAGGTCATACTGAGCTTGCACATTTGTTAATTGGATATGGAGCAGATATTGAAGAAGTGAATGATGAGGGCTATACACCTTTAATGGAAGCTGCAAGAGAAGGTCATGAAGAAACTGTCGCTTTATTGCTTGCAGTAGGTGCTGAGGTTAAC]

[+] EMBL CD092908             [CATTTTAACTACACCGTGGTACATTCGACTGGAAGTGATTCGGTGTGTTGTTACGTTACTTCGTTAAGTTGGATGCTTGGAAATGGGGGATTTTCAGAGTTTTAAGTTCGAGAATTCTATACCGGATTTATGTCCTGAAACACAGCTGAACTTTAGAAAGTTTCTTCAAGCTGCTGGGATTGAAAACATGTTAATTAAAGATGGCCGGAGAATATCAGATACCGAGGTACTAAATGAAATCAGGAAAGAGGTTGCTGTGTTGTCTATGAATGACGATGATGGGCGGACCTCGTCGCTGATTCTTGCGTGTATCAACGGTGACGATGAAGCTGCTAAACTGCTCATTCTTTCGGAAACTGCACTGACGTGTGCCATATCCTCGAATGCTGTGCGGATTGTGGAGATGTTGTTAAAACATGGGTCTGATCCAAACTTTCGTGGTAAGAAAGTTGAGTGCACCCCATTGATGGAAGCTGCCAGTGTTGGCTATACTGATATTGCGAAGTTGCTGTTGGAGCATGGAGCATGTGTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD111718             [ ATTTTAACTACACCGTGGTACATTCGACTGGAAGTGATTCGGTGTGTTGTTACGTTACTTCGTTAAGTTGGATGCTTGGAAATGGGGGATTTTCAGAGTTTTAAGTTCGAGAATTCTATACCGGATTTATGTCCTGAAACACAGCTGAACTTTAGAAAGTTTCTTCAAGCTGCTGGGATTGATAACATGTTAAT        GCCGGAGAATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD097137             [                                                                                                                                                                                                                                                                                                                                                                                       ATCCTCGAATGCTGTGCGGATTGTGGAGATGTTGTTAAAACATGGGTCTGATCCAAACTTTCGTGGTAAGAAAGTTGAGTGCACCCCATTGATGGAAGCTGCCAGTGTTGGCTATACTGATATTGTGGAGTTGCTGTTGGAGCATGGAGCATGTGTTGCCCAAAAATCAAACACAGGAAATACTGCACTACATTATGCTGCTACTTCCGGTCACTTGGAGTGTGTTTGTCTTTTGCTACAGTACAATAGCCCAATGGAAGTTCAAAATGATACGGGTCATACACCTTTAATGGAAGCTACAAGTAACGGGCACGTAGACGTCG CTCGTTGCCTTATAAAACATGGATGCGATATTAACACACATTCAGCG GAGTTCAAGGAATCCGCACTAACTCTGGCCAGCTACAAAG                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD097131             [                                                                                                                                                                                                                                                                                                                                                                                       ATCCTCGAATGCTGTGCGGATTGTGGAGATGTTGTTAAAACATGGGTCTGATCCAAACTTTCGTGGTAAGAAAGTTGAGTGCACCCCATTGATGGAAGCTGCCAGTGTTGGCTATACTGATATTGTGAAGTTGCTGTTGGAGCATGGAGCATGTGTTGCCCAAAAATCAAACACAGGAAATACTGCACTACATTATGCTGCTACTTCCGGTCACTTGGAGTGTGTTTGTCTTTTGCTACAGTACAATAGCCCAATGGAAGTTCAAAATGATACGGGTCATACACCTTTAATGGAAGCTACAAGTAACGGGCACGTAGACGTCG CTCGTTGCCTTATAAAGCATGGATGCGATATTAACACACATTCAGCG GAGTTCAAGGAATCCGCACTAACTCTGGCc                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD086608             [                                                                                                                                                                                                                                                                                                                                                                                        TCCTCGAATGCTGTGCGGATTGTGGAGATGTTGTTAAAACATGGGTCTGATCCAAACTTTCGTGGTAAGAAAGTTGAGTGCACCCCATTGATGGAAGCTGCCAGTGTTGGCTATACTGATATTGTGAAGTTGCTGTTGGAGCATGGAGCATGTGTTGCCCAAAAATCAAACACAGGAAATACTGCACTACATTATGCTGCTACTTCCGGTCACTTGGAGTGTGTTTGTCTTTTGCTACAGTACAATAGCCCAATGGAAGTTCAAAATGATACGGGTCATACACCTTTAATGGAAGCTACAAGTAACGGGCACGTAGACGTCG CTCGTTGCCTTATAAAACATGGATGCGATATTAACACACATTCAGCG GAGTTCAAGGAATCCGCACTAACTCTGGCAAGCTACAAAGGTCATGCGGAAATGGTCCGTTTCCTGTTGACTGCAGGAGCCGATCACGAACATCGTACTGATGAAATGCACACTGCTCTGATGGAAGCTG                                                                                                                                                                                                                                                                 ]
[-] EMBL CD086578             [                                                                                                                                                                                                                                                                                                                                                                                        TCCTCGAATGCTGTGCGGATTGTGGAGATGTTGTTAAAACATGGGTCTGATCCAAACTTTCGTGGTAAGAAAGTTGAGTGCACCCCATTGATGGAAGCTGCCAGTGTTGGCTATACTGATATTGTGAAGTTGCTGTTGGAGCATGGAGCATGTGTTGCCCAAAAATCAAACACAGGAAATACTGCACTACATTATGCTGCTACTTCCGGTCACTTGGAGTGTGTTTGTCTTTTGCTACAGTACAATAGCCCAATGGAAGTTCAAAATGATACGGGTCATACACCTTTAATGGAAGCTACAAGTAACGGGCACGTAGACGTCG CTCGTTGCCTTATAAAACATGGATGCGATATTAACACACATTCAGCG GAGTTCAAGGAATCCGCACTAACTCTGGCAAGCTACAAAGGTCATGCGGAAATGGTCCGTTTCCTGTTGACTGCAGGAGCCGATCACGAACATCGTACTGATGAAATGCACACTGCTCTGATGGAAGCTG                                                                                                                                                                                                                                                                 ]
[-] EMBL CD086553             [                                                                                                                                                                                                                                                                                                                                                                                                                                                  TTCGTGGTAAGAAAGTTGAGTGCACCCCATTGATGGAAGCTGCCAGTGTTGGCTATACTGATATTGTGAAGTTGCTGTTGGAGCATGGAGCATGTGTTGCCCAAAAATCAAACACAGGAAATACTGCACTACATTATGCTGCTACTTCCGGTCACTTGGAGTGTGTTTGTCTTTTGCTACAGTACAATAGCCCAATGGAAGTTCAAAATGATACGGGTCATACACCTTTAATGGAAGCTACAAGTAACGGGCACGTAGACGTCG CTCGTTGCCTTATAAAACATGGATGCGATATTAACACACATTCAGCG GAGTTCAAGGAATCCGCACTAACTCTGGCAAGCTACAAAGGTCATGCGGAAATGGTCCGTTTCCTGTTGACTGCAGGAGCCGATCACGAACATCGTACTGATGAAATGCACACTGCTCTGATGGAAGCTGCAATGGAAGGTCAGTGCa                                                                                                                                                                                                                                               ]
[-] EMBL CD059337             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ATATTGTGAAGTTGCTGTTGGAGCATGGAGCATGTTTTGCCCAAAAATCAAACACAGGAAATACTGCAGTACATTATGCTGCTACTTCCGGTCACTTGGAGTGTGTTTGTCTTTTGCTACAGTACAATAGCCCAATGGAAGTTCAAAATGATGCGGGTCATACACCTTTAATGTAAGCTGCAAGTAACGGGCACGTAGACGTCG CTCGTTGCCTTATAAAACATGTATGCa                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD116062             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GTTGCCCAAAAATCAAACACAGGAAATACTGCACTACATTATGCTGCTACTTCCGGTCACTTGGAGTGTGTTTGTCTTTTGCTACAGTACAATAGCCCAATGAAAGTTCAAAATGATACGGGTCATACACCTTTAATGGAAGCTACAAGTAACGGGCACGTAGACGTCG CTCGTTGCCTTATAAAACATGGATGCGATATTAACACACATTCAGCG GAGTTCAAGGAATCCGCACTAACTCTGGCAAGCTACAGAGGTCATGCGGAAATGGTCCGTTTCCTGTTGACTGCAGGAGCCGATCACGAACATCG                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD086634             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TTCAAAATGATACGGGTCATACACCTTTAATGGAAGCTACAAGTAACGGGCACGTAGACGTCG CTCGTTGCCTTATAAAACATGGATGCGATATTAACACACATTCAGCG GAGTTCAAGGAATCCGCACTAACTCTGGCAAGCTACAAAGGTCATGCGGAAATGGTCCGTTTCCTGTTGACTGCAGGAGCCGATCACGAACATCGTACTGATGAAATGCACACTGCTCTGATGGAAGCTGCAATGGAAGGTCAGCGCc                                                                                                                                                                                                                                               ]
[+] EMBL CD113081             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GATACGGGTCATACACCTTTAATGGAAGCTACAAGTAACGGTCACGTAGACGTCGACTCGTTGCCTTATAAAACATAGATGCGATATTAACACACATTCAGCGTGAGTTCAAGGAATCCGCACTAACTCTGGCCAGCTACAAAGGTCATGCGGAAATGGTCCGTTTCCTGTTGACTGCAGGAGCCGATCACGAACATCGGACTGATGAAATGCACACTGCTCTGATGGAAGCTGCAATGGAAGGTCATGTCGAAGTTGCTC                                                                                                                                                                                                                                      ]
[+] EMBL CD159006             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GATATTAACACACATTCAGCG GAGTTCAAGGAATCCGCACTAACTCTGGCCAGCTACAAAGGTCATGCGGAAATGGTCCGTTTCCTGTTGACTGCAGGAGCCGATCACGAACATCGTACTGATGAAATGCACACTGCTCTGATGGAAGCTGCAATGGAAGGTCATGTCGAAGTTGCTCGATTACTCCTTGCTCATGGCGCGAATGTGAACATACCACAAGATAGTTTTGAGTCCCCTCTAACCTTGGCTGCTTGTGGAGGTCATACTGAGCTTGCACATTTGTTAATTGGATATGGAGCAGATATTGAAGAAGTGAATGATGAGGGCTATACACCTTTAATGGAAGCTGCAAGAGAAGGTCATGAAGAAACTGTCGCTTTATTGCTTGCAGTAGGTGCTGAGGTTAAC]




>consensus_10738#0
CATTTTAACTACACCGTGGTACATTCGACTGGAAGTGATTCGGTGTGTTGTTACGTTACT
TCGTTAAGTTGGATGCTTGGAAATGGGGGATTTTCAGAGTTTTAAGTTCGAGAATTCTAT
ACCGGATTTATGTCCTGAAACACAGCTGAACTTTAGAAAGTTTCTTCAAGCTGCTGGGAT
TGAAAACATGTTAATTAAAGATGGCCGGAGAATATCAGATACCGAGGTACTAAATGAAAT
CAGGAAAGAGGTTGCTGTGTTGTCTATGAATGACGATGATGGGCGGACCTCGTCGCTGAT
TCTTGCGTGTATCAACGGTGACGATGAAGCTGCTAAACTGCTCATTCTTTCGGAAACTGC
ACTGACGTGTGCCATATCCTCGAATGCTGTGCGGATTGTGGAGATGTTGTTAAAACATGG
GTCTGATCCAAACTTTCGTGGTAAGAAAGTTGAGTGCACCCCATTGATGGAAGCTGCCAG
TGTTGGCTATACTGATATTGTGAAGTTGCTGTTGGAGCATGGAGCATGTGTTGCCCAAAA
ATCAAACACAGGAAATACTGCACTACATTATGCTGCTACTTCCGGTCACTTGGAGTGTGT
TTGTCTTTTGCTACAGTACAATAGCCCAATGGAAGTTCAAAATGATACGGGTCATACACC
TTTAATGGAAGCTACAAGTAACGGGCACGTAGACGTCGCTCGTTGCCTTATAAAACATGG
ATGCGATATTAACACACATTCAGCGGAGTTCAAGGAATCCGCACTAACTCTGGCAAGCTA
CAAAGGTCATGCGGAAATGGTCCGTTTCCTGTTGACTGCAGGAGCCGATCACGAACATCG
TACTGATGAAATGCACACTGCTCTGATGGAAGCTGCAATGGAAGGTCAGGGCGAAGTTGC
TCGATTACTCCTTGCTCATGGCGCGAATGTGAACATACCACAAGATAGTTTTGAGTCCCC
TCTAACCTTGGCTGCTTGTGGAGGTCATACTGAGCTTGCACATTTGTTAATTGGATATGG
AGCAGATATTGAAGAAGTGAATGATGAGGGCTATACACCTTTAATGGAAGCTGCAAGAGA
AGGTCATGAAGAAACTGTCGCTTTATTGCTTGCAGTAGGTGCTGAGGTTAAC

consensusID : consensus_10738#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 547
fasta sequence

                              [ATTTTAACTACACCGTGGTACATTCGACTGGAAGTGATTCGGTGTGTTGTTACGTTACCTCGTTAAGTTGGATGCTTGGAAATGGGGGATTTTCAGAGTTTTAAGTTCGAGAATTCTATACCGGATTTATGTCCTGAAACACAGCTGAACTTTAGAAAGTTTCTTCAAGCTGCTGGGATTGAAAACATGTTAATTAAAGATGGCCGGAGAATATCAGATACCGAGGTACTAAATGAAATCAGGAAAGAGGTTGCTGTGTTGTCTATGAATGACGATGATGGGCGGACCTCGTCGCTGATTCTTGCGTGTATCAACGGTGACGATGAAGCTGTTAAACTGCTCATTCTTTCGGGTGAGTGCGATGTAAATGAAGTTGCACCAGATGGAGAAACTGCACTGACGTGTGCCATATCCTCGAATGCTGTGCGGATTGTGGAGATGTTGTTAAAACATGGGTCTGATCCAAACTTTCGTGGTAAGAAAGTTGAGTGCACCCCATTGATGGAAGCTGCCAGTGTTGGCTATACTGATATTGTGAAGTTGCTGT]

[-] EMBL CD188948             [ATTTTAACTACACCGTGGTACATTCGACTGGAAGTGATTCGGTGTGTTGTTACGTTACCTCGTTAAGTTGGATGCTTGGAAATGGGGGATTTTCAGAGTTTTAAGTTCGAGAATTCTATACCGGATTTATGTCCTGAAACACAGCTGAACTTTAGAAAGTTTCTTCAAGCTGCTGGGATTGAAAACATGTTAATTAAAGATGGCCGGAGAATATCAGATACCGAGGTACTAAATGAAATCAGGAAAGAGGTTGCTGTGTTGTCTATGAATGACGATGATGGGCGGACCTCGTCGCTGATTCTTGCGTGTATCAACGGTGACGATGAAGCTGTTAAACTGCTCATTCTTTCGGGTGAGTGCGATGTAAAT                                                                                                                                                                                  ]
[+] EMBL CD151782             [                                                                                      GGATTTTCAGAGTTTTAAGTTCGATAATTCTATACCGGATTTATGTCCTGAAACACAGCTGAACTTTAGAAAGTTTCTTCAAGCTGCTGGGATTGAAAACATGTTATTTAAAGATGGCCGGAGAATATCACATACCGAGGTACTAAATGAAATCACGAAAGAGGTTGCTGTGTTGCCTATGAATGACGATGATGGGCGGACCTCGTCGCTGATTCTTGCGTGTATCAACGGTGACGATGAGGCTGCTGAACTGCTCATTCTTTCGGGTGAGTGCGATGTAAATGAAGTTGCACCAGATGGAGAATCTGCACTGACGTGTGCCATA                                                                                                                                        ]
[-] EMBL CD163271             [                                                                                                                                    CCTGAAACACAGCTGAACTTTAGAAAGTTTCTTCAAGCTGCTGGGATTGAAAACATGTTAATTAAAGATGGCCGGAGAATATCAGATACCGAGGTACTAAATGAAATCAGGAAAGAGGTCGCTGTGTTGTCTATGAATGACGATGATGGGCGGACCTCGTCGCTGATTCTTGCGTGTATCAACGGTGACGATGAAGCTGTTAAACTGCTCATTCTTTCGGGTGAGTGCGATGTAAATGAAGTTGCACCAGATGGAGAAACTACACTGACGTGTGCCATATCCTCGAATGCTGTGCGGATTGTGGAGATGTTGTTAAAACATGGGTCTGATCCAAACTTTCGTGGTAAGAAAGTTGAGTGCACCCCATTGATGGAAGCTGCCAGTGTTGGCTATACTGATATTGTGAAGTTGCTGT]
[-] EMBL CD163253             [                                                                                                                                          ACACAGCTGAACTTTAGAAAGTTTCTTCAAGCTGCTGGGATTGAAAACATGTTAATTAAAGATGGCCGGAGAATATCAGATACCGAGGTACTAAATGAAATCAGGAAAGAGGTTGCTGTGTTGTCTATGAATGACGATGATGGGCGGACCTCGTCGCTGATTCTTGCGTGTATCAACGGTGACGATGAAGCTGTTAAACTGCTCATTCTTTCGGGTGAGTGCGATGTAAATGAAGTTGCACCAGATGGAGAAACTGCACTGACGTGTGCCATATCCTCGAATGCTGTGCGGATTGTGGAGATGTTGTTAAAACATGGGTCTGATCCAAACTTTCGTGGTAAGAAAGTTGAGTGCACCCCATTGATGGAAGCTGCCAGTGTTGGCTATACTGATATTGTGAAGTTGCTGT]




>consensus_10738#1
ATTTTAACTACACCGTGGTACATTCGACTGGAAGTGATTCGGTGTGTTGTTACGTTACCT
CGTTAAGTTGGATGCTTGGAAATGGGGGATTTTCAGAGTTTTAAGTTCGAGAATTCTATA
CCGGATTTATGTCCTGAAACACAGCTGAACTTTAGAAAGTTTCTTCAAGCTGCTGGGATT
GAAAACATGTTAATTAAAGATGGCCGGAGAATATCAGATACCGAGGTACTAAATGAAATC
AGGAAAGAGGTTGCTGTGTTGTCTATGAATGACGATGATGGGCGGACCTCGTCGCTGATT
CTTGCGTGTATCAACGGTGACGATGAAGCTGTTAAACTGCTCATTCTTTCGGGTGAGTGC
GATGTAAATGAAGTTGCACCAGATGGAGAAACTGCACTGACGTGTGCCATATCCTCGAAT
GCTGTGCGGATTGTGGAGATGTTGTTAAAACATGGGTCTGATCCAAACTTTCGTGGTAAG
AAAGTTGAGTGCACCCCATTGATGGAAGCTGCCAGTGTTGGCTATACTGATATTGTGAAG
TTGCTGT

consensusID : consensus_10738#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 325
fasta sequence

                              [TGTCGAAGTTGCTCGATTACTCCTTGCTCATGGCGCGAATGTGAACATACCACAAGATAGTTTTGAGTCCCCTCTAACCTTGGCTGCTTGTGGAGGTCATACTGAGCTTGCACATTTGTTAATTGGATATGGAGCAGATATTGAAGAAGTGAATGATGAGGGCTATACACCTTTAATGGAAGCTGCAATGGAAGGTCATGTCCAAGTTGCTCGATTACTCCTTGCTCATGGCGCGAATGTGAACATACCACAAGATAGTTTTGAGTCCCCTCTAACCTTGGCTGCTTGTGGAGGTCATACTGAGCTTGCACATTTGTTAATTGGA]

[+] EMBL CD090462             [TGTCGAAGTTGCTCGATTACTCCTTGCTCATGGCGCGAATGTGAACATACCACAAGATAGTTTTGAGTCCCCTCTAACCTTGGCTGCTTGTGGAGGTCATACTGAGCTTGCACATTTGTTAATTGGATATGGAGCAGATATTGAAGAAGTGAATGATGAGGGCTATACACCTTTAATGGAAGCTGCAATGGAAGGTCATGTCCAAGTTGCTCGATTACTCCTTGCTCATGGCGCGAATGTGAACATACCACAAGATAGTTTTGAGTCCCCTCTAACCTTGGCTGCTTGTGGAGGTCATACTGAGCTTGCACATTTGTTAATT   ]
[+] EMBL CD090449             [               aggagTCCTTGCTCATGGCGCGAATGTGAACATACCACAAGATAGTTGGGAGTCCCCTGTAACCTTGGCTGCTTGTGGAGGTCATACTGAGCTTGCACATTTGTTAATTGGATATGGAGCAGATATTGAAGAAGTGAATGATGAGGGCTATACACCTTTAATGGAAGCTGCTGTGGAACGTCATGTCGAAGTTGCTCGATTACTCCTTGCTCATGGCGCGAATGTGAACATACCACAAGATAGTTTTGAGTCCCCTCTAACCTTGGCTGCTTGTGGAGGTCATACTGAGCTTGCACATTTGTTAATTGGA]




>consensus_10738#2
TGTCGAAGTTGCTCGATTACTCCTTGCTCATGGCGCGAATGTGAACATACCACAAGATAG
TTTTGAGTCCCCTCTAACCTTGGCTGCTTGTGGAGGTCATACTGAGCTTGCACATTTGTT
AATTGGATATGGAGCAGATATTGAAGAAGTGAATGATGAGGGCTATACACCTTTAATGGA
AGCTGCAATGGAAGGTCATGTCCAAGTTGCTCGATTACTCCTTGCTCATGGCGCGAATGT
GAACATACCACAAGATAGTTTTGAGTCCCCTCTAACCTTGGCTGCTTGTGGAGGTCATAC
TGAGCTTGCACATTTGTTAATTGGA

consensusID : consensus_10738#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 133
fasta sequence

                              [TCNCGTGTTCTTGCTCTCTTCAATTCCGCTGGTATACTGCTGCATATCCAAATTAAC-AATGTGCAAGCTCANNATGACCTNCACAAGATAGCTTTGAGTCCCCTCTAACCTTGGCTGCTTGTGGAGGACATAC]

[+] EMBL CD096478             [TCNCGTGTTCTTGCTCTCTTCAATTCCGCTGGTATACTGCTGCATATCCAAATTAAC AATGTGCAAGCTCANNATGACCTNCACAAGATAGCTTTGAGTCCCCTCTAACCTTGGCTGCTTGTGGAGGACA   ]
[+] EMBL CD096483             [                 CTTCAATTCCGCTGGTATACTGCTGCATATCC AATTAACAAATGTGCAAGCTCANTATGACCTCCACAAGATAGTTTTGAGTCCCCTCTAACCTTGCCTGCTTGTGGAGGTCATAC]




>consensus_10738#3
TCNCGTGTTCTTGCTCTCTTCAATTCCGCTGGTATACTGCTGCATATCCAAATTAACAAT
GTGCAAGCTCANNATGACCTNCACAAGATAGCTTTGAGTCCCCTCTAACCTTGGCTGCTT
GTGGAGGACATAC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10738#2      ------------------------------------------------------------
consensus_10738#3      ------------------------------------------------------------
consensus_10738#0      CATTTTAACTACACCGTGGTACATTCGACTGGAAGTGATTCGGTGTGTTGTTACGTTACT 60
consensus_10738#1      -ATTTTAACTACACCGTGGTACATTCGACTGGAAGTGATTCGGTGTGTTGTTACGTTACC 59
                                                                                   

consensus_10738#2      ------------------------------------------------------------
consensus_10738#3      ------------------------------------------------------------
consensus_10738#0      TCGTTAAGTTGGATGCTTGGAAATGGGGGATTTTCAGAGTTTTAAGTTCGAGAATTCTAT 120
consensus_10738#1      TCGTTAAGTTGGATGCTTGGAAATGGGGGATTTTCAGAGTTTTAAGTTCGAGAATTCTAT 119
                                                                                   

consensus_10738#2      ------------------------------------------------------------
consensus_10738#3      ------------------------------------------------------------
consensus_10738#0      ACCGGATTTATGTCCTGAAACACAGCTGAACTTTAGAAAGTTTCTTCAAGCTGCTGGGAT 180
consensus_10738#1      ACCGGATTTATGTCCTGAAACACAGCTGAACTTTAGAAAGTTTCTTCAAGCTGCTGGGAT 179
                                                                                   

consensus_10738#2      ------------------------------------------TGTCGAAGTTGCTCGATT 18
consensus_10738#3      ------------------------------------------------------------
consensus_10738#0      TGAAAACATGTTAATTAAAGATGGCCGGAGAATATCAGATACCGAGGTACTAAATGAAAT 240
consensus_10738#1      TGAAAACATGTTAATTAAAGATGGCCGGAGAATATCAGATACCGAGGTACTAAATGAAAT 239
                                                                                   

consensus_10738#2      ACTCCTTGCTCATGGCGCGAATGTGAACATACCACAAGATAGTTTTGAGTCCCCTCTAAC 78
consensus_10738#3      ------------------------------------------------------------
consensus_10738#0      CAGGAAAGAGGTTGCTGTGTTGTCTATGAATGACGATGATGGGCGGACCTCGTCGCTGAT 300
consensus_10738#1      CAGGAAAGAGGTTGCTGTGTTGTCTATGAATGACGATGATGGGCGGACCTCGTCGCTGAT 299
                                                                                   

consensus_10738#2      CTTGGCTGCTTGTGGAGGTCATACTGAGCTTGCACATTTGTTAATTGGATATGGAGCAGA 138
consensus_10738#3      ------------------------------------------------------------
consensus_10738#0      TCTTGCGTGTATCAACGGTGACGATGAAGCTGCTAAACTGCTCATTCTTTCGG------- 353
consensus_10738#1      TCTTGCGTGTATCAACGGTGACGATGAAGCTGTTAAACTGCTCATTCTTTCGGGTGAGTG 359
                                                                                   

consensus_10738#2      TATTGAAGAAGTGAATGATGAGGGCTATACACCTTTAATGGAAGCTGCAATGGAAGGTCA 198
consensus_10738#3      ---------------TCNCGTGTTCTTGCTCTCTTCAATTCC-GCTGGTATACTGCTGCA 44
consensus_10738#0      -----------------------------AAACTGCACTGACGTGTGCCATATCCTCGAA 384
consensus_10738#1      CGATGTAAATGAAGTTGCACCAGATGGAGAAACTGCACTGACGTGTGCCATATCCTCGAA 419
                                                       **  * *      **  **        *

consensus_10738#2      TGTC---CAAGTTGCTCGATTACTCCTTGCTCATGGCGCGAATGTGAACATACC--ACAA 253
consensus_10738#3      TATC---CAAATTAA-CAATG--TGCAAGCTCANNATG---------ACCTNC---ACAA 86
consensus_10738#0      TGCTGTGCGGATTGTGGAGATGTTGTTAAAACATGGGTCTGATCCAAACTTTCGTGGTAA 444
consensus_10738#1      TGCTGTGCGGATTGTGGAGATGTTGTTAAAACATGGGTCTGATCCAAACTTTCGTGGTAA 479
                       *      *   **          *       **              ** * *     **

consensus_10738#2      GATAGTTTTGAGT-CCCCTCTAACCTTGGCTGCTTGTGGAGGTCATACTGAGCTTGCACA 312
consensus_10738#3      GATAGCTTTGAGT-CCCCTCTAACCTTGGCTGCTTGTGGAGGACATAC------------ 133
consensus_10738#0      GAAAGTTGAGTGCACCCCATTGATGGAAGCTGCCAGTGTTGGCTATACTGATATTGTGAA 504
consensus_10738#1      GAAAGTTGAGTGCACCCCATTGATGGAAGCTGCCAGTGTTGGCTATACTGATATTGTGAA 539
                       ** ** *  * *  ****  * *     *****  ***  **  ****            

consensus_10738#2      TTTGTTAATTGGA----------------------------------------------- 325
consensus_10738#3      ------------------------------------------------------------
consensus_10738#0      GTTGCTGTTGGAGCATGGAGCATGTGTTGCCCAAAAATCAAACACAGGAAATACTGCACT 564
consensus_10738#1      GTTGCTGT---------------------------------------------------- 547
                                                                                   

consensus_10738#2      ------------------------------------------------------------
consensus_10738#3      ------------------------------------------------------------
consensus_10738#0      ACATTATGCTGCTACTTCCGGTCACTTGGAGTGTGTTTGTCTTTTGCTACAGTACAATAG 624
consensus_10738#1      ------------------------------------------------------------
                                                                                   

consensus_10738#2      ------------------------------------------------------------
consensus_10738#3      ------------------------------------------------------------
consensus_10738#0      CCCAATGGAAGTTCAAAATGATACGGGTCATACACCTTTAATGGAAGCTACAAGTAACGG 684
consensus_10738#1      ------------------------------------------------------------
                                                                                   

consensus_10738#2      ------------------------------------------------------------
consensus_10738#3      ------------------------------------------------------------
consensus_10738#0      GCACGTAGACGTCGCTCGTTGCCTTATAAAACATGGATGCGATATTAACACACATTCAGC 744
consensus_10738#1      ------------------------------------------------------------
                                                                                   

consensus_10738#2      ------------------------------------------------------------
consensus_10738#3      ------------------------------------------------------------
consensus_10738#0      GGAGTTCAAGGAATCCGCACTAACTCTGGCAAGCTACAAAGGTCATGCGGAAATGGTCCG 804
consensus_10738#1      ------------------------------------------------------------
                                                                                   

consensus_10738#2      ------------------------------------------------------------
consensus_10738#3      ------------------------------------------------------------
consensus_10738#0      TTTCCTGTTGACTGCAGGAGCCGATCACGAACATCGTACTGATGAAATGCACACTGCTCT 864
consensus_10738#1      ------------------------------------------------------------
                                                                                   

consensus_10738#2      ------------------------------------------------------------
consensus_10738#3      ------------------------------------------------------------
consensus_10738#0      GATGGAAGCTGCAATGGAAGGTCAGGGCGAAGTTGCTCGATTACTCCTTGCTCATGGCGC 924
consensus_10738#1      ------------------------------------------------------------
                                                                                   

consensus_10738#2      ------------------------------------------------------------
consensus_10738#3      ------------------------------------------------------------
consensus_10738#0      GAATGTGAACATACCACAAGATAGTTTTGAGTCCCCTCTAACCTTGGCTGCTTGTGGAGG 984
consensus_10738#1      ------------------------------------------------------------
                                                                                   

consensus_10738#2      ------------------------------------------------------------
consensus_10738#3      ------------------------------------------------------------
consensus_10738#0      TCATACTGAGCTTGCACATTTGTTAATTGGATATGGAGCAGATATTGAAGAAGTGAATGA 1044
consensus_10738#1      ------------------------------------------------------------
                                                                                   

consensus_10738#2      ------------------------------------------------------------
consensus_10738#3      ------------------------------------------------------------
consensus_10738#0      TGAGGGCTATACACCTTTAATGGAAGCTGCAAGAGAAGGTCATGAAGAAACTGTCGCTTT 1104
consensus_10738#1      ------------------------------------------------------------
                                                                                   

consensus_10738#2      ----------------------------
consensus_10738#3      ----------------------------
consensus_10738#0      ATTGCTTGCAGTAGGTGCTGAGGTTAAC 1132
consensus_10738#1      ----------------------------