cluster # 10742

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Schistosoma mansoni
cluster # 10742 cluster # 10742 Sequences # 21 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10742#0 length = 1456 sequences # 17

consensus_10742#1 length = 488 sequences # 4

consensusID : consensus_10742#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 17
consensus length = 1456
fasta sequence

                              [CAGAATTTGGCACGAGGAGCGTTTTTACTCAGAAGTTGAATGAGCTACGGGATGCATCTAGTTTTGCCTCTCTGACTGCGGCTCTTAGTCCTGTTACTTCTGCGGTAAATAATAGTGGTTTGTACAATATTAATTTGGCTGATTTCAACTCTCAAAATCTACCAAACTTTGCCGAACTATGTCGTCAGGCAAGTCAAAGTGGAATCAACACAACTCCAGCATCTATACTTTTTTACTCGCCAGCTTGCTTCGATGCTCAGTCTTTCCCGAGTGTTCAGACTGTTACTCCAGGTCTTGTTGCTTTTCAGCCTCAACAGACTGATTCGGTCAACTCAACGTCTGAACAGAGTATCACACTAACAAATTTACAAAATTCGCTTTCTATTTCTCTTCCCAATACTGTCCAACCAGTCACGGAAAGTGAAGTTACAACTGTTCAACTGCCTAACGGTTTGCGTCTTGGTATAACGACCAATGGTGCTTCACAAGCATCAGTTCTTCAGATGCTAGGTATTGAGCCCCAACCAGAGATTGTCCATCATGCCCATATTCAGAATCCATCTTTAGATCCGTCTCTTTGGCCTCTAAACATACAAACAAATTTACCCTCTAACGACACTTCCGATAGTCGTCGTACAGCTTCAGCAAGTTCACCACAAGACCCTGATGATGCTCGTCCTTCTTCAGTAGATATTAATTTAGAGCAAAATGATCCGATGCGGGACGTCAGGTCATCTTCCGTTTCTTCTGTTTCTTCTTCGTCTCAAGGAAATAGTTCTAGAAACCTAGCGGTTTCTAATCTCAAGGACACACGTTTGGATCCTACTGAGCAGTCGCGCATGCGGTTAGAACGGAAGAGAGCAAGAAACCGTGATGCGGCTCGTAAATGTAGGGAAAGAAAGATTCGTTTGATTAAAAGTTTGGAGAAAGACGTCATTCATCTCTCCGAAGAAAACAGGGCGTTACGCAATCGATTATCTCGCAGCAGAATTGAGGTAGAACGTCTGAAAATGTTTGTTGTCAATCATCTTGACAAGGACTGTCCTGCTTTATCTAGTAAGGTAGCTTAAATCAGTCTTCACTAGTAGCTAGTTTAATTTTATCT-TAACAATCCTCCTGCTTTCTTA-TTTTTTGTGTGAAGCGCCAATCGGTAATAAGTTAGTTAATTTCGTATAATATTCACAAGTATTATCAGTCTAATTTACCTTGCTTCTTGCCATCCAAACTATATTAACTAGTGACTTTGTCCATGTGATTTTGTTCTGTGCACCCACTTGATAATATTCGCACTTCGTTTCCATTGTACAGACTCATCTACCTCATCGCTTTTGGCATCTAAAAGCTATCCTATTATAAGTCAGATTTTTGTTTGATATTTACTAACCTGTTGTCCAAAGATTATCTTGTGTGCTATTTCAAAAAATCTAACTTATCTAGTCGAAAAAAAGTATAAAAA]

[+] EMBL CD079470             [CAGAATTTGGCACGAGGAGCGTTTTTACTCAGAAGTTGAATGAGCTACGGGATGCATCTAGTTTTGCCTCTCTGACTGCGGCTCTTAGTCCTGTTACTTCTGCGGTAAATAATAGTGGTTTGTACAATATTAATTTGGCTGATTTCAACTCTCAAAATCTACCAAACTTTGCCGAACTATGTCGTCAGGCAAGTCAAAGTGGAATCAACACAACTCCAGCATCTATACTTTTTTACTCGCCAGCTTGCTTCGATGCTCAGTCTTTCCCGAGTGTTCAGACTGTTACTCCAGGTCTTGTTGCTTTTCAGCCTCAACAGACTGATTCGGTCAACTCAACGTCTGAACAGAGTATCACACTAACAAATTTACAAAATTCGCTTTCTATTTCTCTTCCCAATACTGTCCAACC TTCACGGAAAGTGAAGTTACAACTGTTCAACTGCCTAACGGTTTGCGTCTTGGTATAACGACCAATGGTGCTTCACAAGCATCAGTTCTTCAGATGCTAGGTATTGAGCCCCAACCAGAGATTGTCCATCATGCCCATATTCAGAATCCATCTTTAGATCCGTCTCTTTGGCCTCTAAACATACAAACAAATTTACCCTCTAACGACACTTCCGATAGTCGTCGTACAGCTTCAGCAAGTTCACCACAAGACCCTGATGATGCTCGTCCTTCTTCAGTAGATATTAATTTAGAGCAAAATGATCCGATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CD160995             [                                                                TGCCTCTCTGACTGCGGCTCTTAGTCCTGTTACTTCTGCGGTAAATAATAGCGGTTTGTACAATATTAATTTGGCTGATTTCAACTCTCAAAATCTACCAAACTTTGCCGAACTATGTCGTCAGGCAAGTCAAAGTGGAATCAACACAACTCCAGCATCTATACTTTTTTACTCGCCAGCTTGCTTCGATGCTCAGTCCTTCCCGAGTGTTCGGACTGTTACTCCAGGTCTTGTTGCTTTTCAGCCTCAACAGACTAATTCGGTCAACTCAACGTCTGAACAGAGTATCACACTAACAAATTTACAAAATTCGCTTTCTATTTCTCTTCCCAATACTGTCCAACCAGTCACGGAAAGTGAAGTTACAACTGTTCAACTGCCTAACGGTTTGCGTCTTGGTATAACGACCAATGGTGCTTCACAAGCATCAGTTCTTCAGATGCTAGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD168291             [                                                                                                                                                                                                                           CATCTATACTTTTTTACTCGCCAGCTTGCTTCGATGCTCAGTCTTTCCCGAGTGTTCAGACTGTTACTCCAGGTCTTGTTGCTTTTCAGCCTCAACAGACTGATTCGGTCAACTCAACGTCTGAACAGAGTATCACACTAACAAATTTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD067518             [                                                                                                                                                                                                                           CATCTATACTTTTTTACTCGCCAGCTTGCTTCGATGCTCAGTCTTTCCCGAGTGTTCAGACTGTTACTCCAGGTCTTGTTGCTTTTCAGCCTCAACAGACTGATTCGGTCAACTCAACGTCTGAACAGAGTATCACACTAACAAATTTACAAAATTCGCTTTCTATTTCTCTTCCCAATACTGTCCAACCAGCCACGGAAAGTGAAGTTACAACTGTTCAACTGCCTAACGGTTTGCGTCTTGGTATAACGACCAATGGTGCTTCACAAGCATCAGTTCTTCAGATGCTAGGTATTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD097990             [                                                                                                                                                                                                                              CTATACTTTTTTACTCGCCAGCTTGCTTCGATGCTCAGTCTTTCCCGAGTGTTCAGACTGTTACTCCAGGTCTTGTTGCTTTTCAGCCTCAACAGACTGATTCGGTCAACTCAACGTCTGAACAGAGTATCACACTAACAAATTTGCAAAATTCGCTTTCTATTTCTCTTCCCAATACTGTCCAACCAGTCACGGAAAGTGAAGTTACAACTGTTCAACTGCCTAACGGTTTGCGTCTTGGTATAACGACCAATGGTGCTTCACAAGCATCAGTTCTTCAGATGCTAGGTATTGAGCCCCAACCAGAGATTGTCCATCATGCCCATATTCAGAATCCATCTTTAGATCCGTCTCTTTGGCCTCTAAACATACAAACAAATTTACCCTCTAACGACACTTCCGATAGTCGTCGTACAGCTTCAGCAAGTTCACCACAAGACCCTGATGATGCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD163232             [                                                                                                                                                                                                                                                                                                                     CTCAACAGACTGATTCGGTCAACTCAACGTCTGAACAGAGTATCACACTAACAAATTTACGAAATTCGCTTTCTATCTCTCTTCCCAATACTGTCCAACCAGTCACGGAAAGTGAAGTTACAACTGTTCAACTGCCTAACGGTCTGCGTCTTGGTATAACGACCAATGGTGCTTCACAAGCATCAGTTCTTCAGATGCTAGGTATTGAGCCCCAACCAGAGATTGTCCATCATGCCCATATTCAGAATCCATCTTTAGATCCGTCTCTTTGGCCTCTAAACATACAAACAAATTTACCCTCTAACGACACTTCCGATAGTCGTCGTACAGCTTCAGCAAGTTCACCACAAGACCCTGATGATGCTCGTCCTTCTTCAGTAGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL BG930874             [                                                                                                                                                                                                                                                                                                                                                  TCTGTACAGAGTATCACAATAACAAATGTACCATATTCGCTTTCTATTTATCTTCCCAATACTGTCCAACCAGTCACGGAAAGTGAAGTGACAACTGTTCAACTGCCTAACGGTTTGCGTCTTGGTATAACGACCAATGGTGCTTCACAAGCATCAGTTCTTCAGATGATAGGTATTGAt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD095290             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GGTGCTTCACAAGCATCAGTTCTTCAGATGCTAGGTATTGAGCCCCAACCAGAGATTGTCCATCATGCCCATATTCAGAATCCATCTTTAGATCCGTCTCTTTGGCCTCTAAACATACAAACAAATTTACCCTCTAACGACACTTCCGATAGTCGTCGTACAGCTTCAGCAAGTTCACCACAAGACCCTGATGATGCTCGTCCTTCTTCAGTAGATATTAATTTAGAGCAAAATGATCCGATGCGGGACGTCAGGTCATCTTCCGTTTCTTCTGTTTCTTCTTCGTCTCAAGGAAATAGTTCTAGAAACCTAGCGGTTTCTAATCTCAAGGACGCACGTTTGGATCCTACTGAGCAGTCGCGCATGCGGTTAGAACGGAAGAGAGCAAGAAACCGTGATGCGGCTCGTAAATGTAGGGAAAGAAAGATTCGTTTGATTAAAAGTTTGGAGAAAGACGTCATTCATCTCTCCGAAGAAAACAGGGCGTTACGCAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD201607             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TCATGCCCATATTCAGAATCCATCTTTAGATCCGTCTCTTTGGCCTCTAAACATACAAACAAATTTACCCTCTAACGACACTTCCGATAGTCGTCGTACAGCTTCAGCAAGTTCACCACAAGACCCTGATGATGCTCGTCCTTCTTCAGTAGATATTAATTTAGAGCAAAATGATCCGATGCGGGACGTCAGGTCATCTTCCGTTTCTTCTGTTTCTTCTTCGTCTCAAGGAAATAGTTCTAGAAACCTAGCGGTTTCTAATCTCAAGGACACACGTTTGGATCCTACTGAGCAGTCGCGCATGCGGTTAGAACGGAAGGGAGCAAGAAACCGTGATGCGGCTCGTAAATGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD141572             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GAATCCATCTTTAGATCCGTCTCTTTGGCCTCTAAACATACAAACAAATTTACCCTCTAACGACACTTCCGATAGTCGTCGTACAGCTTCAGCAAGTTCACCACAAGACCCTGATGATGCTCGTCCTTCTTCAGTAGATATTAATTTAGAGCAAAATGATCCGATGCGGGACGTCAGGTCATCTTCCGTTTCTTCTGTTTCTTCTTCGTCTCAAGGAAATAGTTCTAGAAACCTAGCGGTTTCTAATCTCAAGGACACACGTTTGGATCCTACTGAGCAGTCGCGCATGCGGTTAGAACGGAAGAGAGCAAGANACCGTGATGCGGCTCGTAAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD066563             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GCAAGTTCACCACAAGACCCTGATGATGCTCGTCCTTCTTCAGTAGATATTAATTTAGAGCAAAATGATCCGATGCGGGACGTCAGGTCATCTTCCGTTTCTTCTGTTTCTTCTTCGTCTCAAGGAAATAGTTCTAGAAACCTAGCGGTTTCTAATCTCAAGGACACACGTTTGGATCCTACTGAGCAGTCGCGCATGCGGTTAGAACGGAAGAGAGCAAGAACCCGTGATGCGGCTCGTAAATGTAGGGAAAGAAAGATTCGTTTGATTAAAAGTTTGGAGAAAGACGTCATTCATCTCTCCGAAGAAAACAGGGCGTTACGCAATCGATTATCTCGCAGCAGAATTGAGGTAGAACGTCTGAAAATGTTTGTTGTCAATCATCTTGACAAGGACTGTCCTGCTTTATCTAGTAAGGTAGCTTAAATCAGTCTTCACTAGTAGCTAGTTTAATTTTATCT                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD079021             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AAGACCCTGATGATGCTCGTCCTTCTTCAGTAGATATTAATTTAGAGCAAAATGATCCGATGCGGGACGTCAGGTCATCTTCCGTTTCTTCTGTTTCTTCTTCGTCTCAAGGAAATAGTTCTAGAAACCTAGCGGTTTCTAATCTCAAGGACACACGTTTGGATCCTACTGAGCAGTCGCGCATGCGGTTAGAACGGAAGAGAGCAAGAAACCGTGATGCGGCTCGTAAATGTAGGGAAAGAAAGATTCGTTTGATTAAAAGTTTGGAGAAAGACGTCATTCATCTCTCCGAAGAAAACAGGGCGTTACGCAATCGATTATCTCGCAGCAGAATTGAGGTAGAACGTCTGAAAATGTTTGTTGTCAATCATCTTGACAAGGACTGTCCTGCTTTATCTAGTAAGGTAGCTTAAATCAGTCTTCACTAGTAGCTAGTTTAATTTTATCT TAACAATCCTCCTGCTTTCTTA TTTTTTGTGTGAAGCGCCAATCGGTAATAAGTTAGTTAATTTCGTATAATATTCACAAGTATTATCAGTCTAATTTACCTTGCTTCTTGCCATCCAAACTATATTAACTAGTGACTNTGTCCATGTGATTNTGNTCTGTGCAC                                                                                                                                                                                          ]
[+] EMBL BG932383             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   gaGTCAGGTCATCTTCCGTTTCTTCTGTTTCTTCTTCGTCTCAAGGAAATAGTTCTAGAAACCTAGCGGTTTCTAATCTCAAGGACACACGTTTGGATCCTACTGAGCAGTCGCGCATGCGGTTAGAACGGAAGAGAGCAAGAAACCGTGATGCGGCTCGTAAATGTATGGAAAGAAAGATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD073741             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CTAGAAACCTAGCGGTTTCTAATCTCAAGGACACACGTTTGGATCCTACTGAGCAGTCGCGCATGCGGTTAGAACGGAAGAGAGCAAGAAACCGTGATGCGGCTCGTAAATGTAGGGAAAGAAAGATTCGTTTGATTAAAAGTTTGGAGAAAGACGTCATTCATCTCTCCGAAGAAAACAGGGCGTTACGCAATCGATTATCTCGCAGCAGAATTGAGGTAGAACGTCTGAAAATGTTTGTTGTCAATCATCTTGACAAGGACTGTCCTGCTTTATCTAGTAAGGTAGCTTAAATCAGTCTTCACTAGTAGCTAGTTTAATTTTATCT TAACAATCCTCCTGCTTTCTTA TTTTTTGTGTGAAGCGCCAATCGGTAATAAGTTAGTTAATTTCGTATAATATTCACAAGTATTATCAGTCTAATTTACCTTGCTTCTTGCCATCCAAACTATATTAACTAGTGACTTTGTCCATGTGATTTTGTTCTGTGCACCCACTTGATAATATTCGCACTTCGTTTCCATTGTACAGACTCATCTACCTCATCGCTTTTGGCATCTAAAAGCTATCCTATTATAAGTCAGATTTTTGTTTGATATTTACTAACCTGTTGTCCAAAGGTTATCTTGTGTGCTATTTCCAAAAATCTAACTTATCTAGTCGAAAAAAAGTATA    ]
[-] EMBL CD069097             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ACTGAGCAGTCGCGCATGCGGTTAGAACGGAAGAGAGCAAGAAACCGTGATGCGGCTCGTAAATGTAGGGAAAGAAAGATTCGTTTGATTAAAAGTTTGGAGAAAGACGTCATTCATCTCTCCGAAGAATACAGGGCGTTACGCAATCGATCATCTCGCAGCAGAATTGAGGTAGAACGTCTGAAAATGTTTCTTGTCAATCATCTTGACAAGGACTGTCCTGCTTTATCTAGT AGGTAGCTTAAATCAGTCTTCACTAGTAGCTAGTTTAATTTTATCT TAACGATCCTCCTGCTTTCTTATTTTTTTGTGTGAAGCGCCAATCGGTAATAAGTTAGTTAATTTCGTATAATATTCACAAGTATTATCAGTCTAATTTACCTTGCTTCTTGCCATCCAAACTATATTAACTAGTGACTTTGTCCATGTGATTTTGTTCTGTGCACCCACTTGATAATATTCGCACTTCGTTTCCATTGTACAGACTCATCTACCTCA                                                                                                                                      ]
[-] EMBL CD073472             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GTCGCGCATGCGGTTAGAACGGAAGAGAGCAAGAAACCGTGATGCGGCTCGTAAATGTAGGGAAAGAAAGATTCGTTTGATTAAAAGTTTGGAGAAAGACGTCATTCATCTCTCCGAAGAAAACAGGGCGTTACGCAATCGATTATCTCGCAGCAGAATTGAGGTAGAACGTCTGAAAATGTTTGTTGTCAATCATCTTGACAAGGACTGTCCTGCTTTATCTAGTAAGGTAGCTTAAATCAGTCTTCACTAGTAGCTAGTTTAATTTTATCT TAACAATCCTCCTGCTTTCTTA TTTTTTGTGTGAAGCGCCAATCGGTAATAAGTTAGTTAATTTCGTATAATATTCACAAGTATTATCAGTCTAATTTACCTTGCTTCTTGCCATCCAAACTATATTAACTAGTGACTTTGTCCATGTGATTTTGTTCTGTGCACCCACTTGATAATATTCGCACTTCGTTTCCATTGTACAGACTCATCTACCTCATCGCTTTTGGCATCTAAAAGCTATCCTATTATAAGTCAGATTTTTGTTTGATATTTACTAACCTGTTGTCCAAAGATTATCTTGTGTGCTATTTCAAAAAATCT                              ]
[-] EMBL AI395529             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ATCTACAACAATCCTCCTGCTTTCTTA TTTTTTGTGTGAAGCCCCAATCGGTAATAAGTTAGTTAATTTCGTATAATATTCACAAGTATTATCAGTCTAATTTCCCTTGCTTCTTGCCATCCAAACTATATTAACTAGTGACTTTGTCCATGTGATTTTGTTCTGTGCACCCACTTGATAATATTCGCACTTCGTTTCCATTGTACAGACTCATCTACCTCATCGCTTTTGGCATCTAAAAGCTATCCTATTATAAGTCAGATTTTTGTTTGATATTTACTAACCTGTTGTCCAAAGATTATCTTGTGTGCTATTTCAAAAAATCTAACTTATTT  TNAAAAAAAAAAAAAAAAA]




>consensus_10742#0
CAGAATTTGGCACGAGGAGCGTTTTTACTCAGAAGTTGAATGAGCTACGGGATGCATCTA
GTTTTGCCTCTCTGACTGCGGCTCTTAGTCCTGTTACTTCTGCGGTAAATAATAGTGGTT
TGTACAATATTAATTTGGCTGATTTCAACTCTCAAAATCTACCAAACTTTGCCGAACTAT
GTCGTCAGGCAAGTCAAAGTGGAATCAACACAACTCCAGCATCTATACTTTTTTACTCGC
CAGCTTGCTTCGATGCTCAGTCTTTCCCGAGTGTTCAGACTGTTACTCCAGGTCTTGTTG
CTTTTCAGCCTCAACAGACTGATTCGGTCAACTCAACGTCTGAACAGAGTATCACACTAA
CAAATTTACAAAATTCGCTTTCTATTTCTCTTCCCAATACTGTCCAACCAGTCACGGAAA
GTGAAGTTACAACTGTTCAACTGCCTAACGGTTTGCGTCTTGGTATAACGACCAATGGTG
CTTCACAAGCATCAGTTCTTCAGATGCTAGGTATTGAGCCCCAACCAGAGATTGTCCATC
ATGCCCATATTCAGAATCCATCTTTAGATCCGTCTCTTTGGCCTCTAAACATACAAACAA
ATTTACCCTCTAACGACACTTCCGATAGTCGTCGTACAGCTTCAGCAAGTTCACCACAAG
ACCCTGATGATGCTCGTCCTTCTTCAGTAGATATTAATTTAGAGCAAAATGATCCGATGC
GGGACGTCAGGTCATCTTCCGTTTCTTCTGTTTCTTCTTCGTCTCAAGGAAATAGTTCTA
GAAACCTAGCGGTTTCTAATCTCAAGGACACACGTTTGGATCCTACTGAGCAGTCGCGCA
TGCGGTTAGAACGGAAGAGAGCAAGAAACCGTGATGCGGCTCGTAAATGTAGGGAAAGAA
AGATTCGTTTGATTAAAAGTTTGGAGAAAGACGTCATTCATCTCTCCGAAGAAAACAGGG
CGTTACGCAATCGATTATCTCGCAGCAGAATTGAGGTAGAACGTCTGAAAATGTTTGTTG
TCAATCATCTTGACAAGGACTGTCCTGCTTTATCTAGTAAGGTAGCTTAAATCAGTCTTC
ACTAGTAGCTAGTTTAATTTTATCTTAACAATCCTCCTGCTTTCTTATTTTTTGTGTGAA
GCGCCAATCGGTAATAAGTTAGTTAATTTCGTATAATATTCACAAGTATTATCAGTCTAA
TTTACCTTGCTTCTTGCCATCCAAACTATATTAACTAGTGACTTTGTCCATGTGATTTTG
TTCTGTGCACCCACTTGATAATATTCGCACTTCGTTTCCATTGTACAGACTCATCTACCT
CATCGCTTTTGGCATCTAAAAGCTATCCTATTATAAGTCAGATTTTTGTTTGATATTTAC
TAACCTGTTGTCCAAAGATTATCTTGTGTGCTATTTCAAAAAATCTAACTTATCTAGTCG
AAAAAAAGTATAAAAA

consensusID : consensus_10742#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 488
fasta sequence

                              [CTATTAAACTTACAACTGCACCTCGCCCAACAACACTAAACATACTGTTGGACAATACAATAAAAAGTCCAGCATTATCTTCCTTCCTGACACCTTCTTTAGAAGAACTACAACCGATTTTACGTTCAGAGGTGAAAAAAATTCTTCAACACCTGAAAGCGTCTCCACAGACTCCTGGAAGCTTCCTCAATCCTAAGCATGTTACTGAAGAACAAGAGAGGTTCGCTAATGTTTTTACTCAGAAGTTGAATGAGCTACGGGATGCATCTAGTTTTGCCTCTCTGACTGCGGCTCTTAGTCCTGTTACTTCTGCGGTAAATAATAGTGGTTTGTACAATATTAATTTGGCTGATTTCAACTCTCAAAATCTACCAAACTTTGCCGAACTATGTCGTCAGGCAAGTCAAAGTGGAATCAACACAACTCCAGCATCTATACTTTTTTACTCGCCAGCTTGCTTCGATGCTCAGTCTTTCCCGAGTGTTCAG]

[+] EMBL CD185080             [CTATTAAACTTACAACTGCACCTCGCCCAACAACACTAAACATACTGTTGGACAATACAATAAAAAGTCCAGCATTATCTTCCTTCCTGACACCTTCTTTAGAAGAACTACAACCGATTTTACGTTCAGAGGTGAAAAAAATTCTTCAACACCTGAAAGCGTCTCCACAGACTCCTGGAAGCTTCCTCAATCCTAAGCATGTTACTGAAGAACAAGAGAGGTTCGCTAATGTTTTTACTCAGAAGTTGAATGAGCTACGGGATGCATCTAGTTTTGCCTCTCTGACTGCGGCTCTTAGTCCTGTTACTTCTGCGGTAAATAATAGTGGTTTGTACAATATTAATTTGGCTGATTTCAACTCTCAAAATCTACCAAACTTTGCCGAACTATGTCGTCAGGCAAGTCAAAGTGGAATC                                                                        ]
[+] EMBL CD185043             [CTATTAAACTTACAACTGCACCTCGCCCAACAACACTAAACATACTGTTGGACAATACAATAAAAAGTCCAGCATTATCTTCCTTCCTGACACCTTCTTTAGAAGAACTACAACCGATTTTACGTTCAGAGGTGGAAAAAATTCTTCAACACCTGAAAGCGTCTCCACAGACTCCTGGAAGCTTCCTCAATCCTAAGCATGTTACTGAAGAACAAGAGAGGTTCGCTAATGTTTTTACTCAGAAGTTGAATGAGCTACGGGATGCATCTAGTTTTGCCTCTCTGACTGCGGCTCTTAGTCCTGTTACTTCTGCGGTAAATAATAGTGGTTTGTACAATATTAATTTGGCTGATTTCAACTCTCAAAATCTACCAAACTTTGCCGAACTATGTCGTCAGGCAAGTCAAAGTGGAATC                                                                        ]
[-] EMBL CD118918             [           ACAACTGCACCTCGCCCAACAACACTAAACATACTGTTGGACAATACAATAAAAAGTCCAGCATTATCTTCCTTCCTGACACCTTCTTTAGAAGAACTACAACCGATTTTACGTTCAGAGGTGGAAAAAATTCTTCAACACCTGAAAGCGTCTCCACAGACTCCTGGAAGCTTCCTCAATCCTAAGCATGTTACTGAAGAACAAGAGAGGTTCGCTAATGTTTTTACTCAGAAGTTGAATGAGCTACGGGATGCATCTAGTTTTGCCTCTCTGACTGCGGCTCTTAGTCCTGTTACTTCTGCGGTAAATAATAGTGGTTTGTACAATATTAATTTGGCTGATTTCAACTCTCAAAATCTACCAAACTTTGCCGAACTATGTCGTCAGGCAAGTCAAAGTGGAATCAACACAACTCCAGCATCTATACTTTTTTACTCGCCA                                    ]
[-] EMBL CD188814             [                                            CTGTTGGACAATACAATAAAAAGTCCAGCATTATCTTCCTTCCTGACACCTTCTTTAGAAGAACTACAACCGATTTTACGTTCAGAGGAGAAAAAAATTCTTCAACACCTGAAAGCGTCTCCACAGACTCCTGGAAGCTTCCTCAATCCTAAGCATGTTACTGAAGAACAAGAGAGGTTCGCTAATGTTTTTACTCAGAAGTTGAATGAGCTACGGGATGCATCTAGTTTTGCCTCTCTGACTGCGGCTCTTAGTCCTGTTACTTCTGCGGTAAATAATAGTGGTTTGTACAATATTAATTTGGCTGATTTCAACTCTCAAAATCTACCAAACTTTGCCGAACTATGTCGTCAGGCAAGTCAAAGTGGAATCAACACAACTCCAGCATCTATACTTTTTTACTCGCCAGCTTGCTTCGATGCTCAGTCTTTCCCGAGTGTTCAG]




>consensus_10742#1
CTATTAAACTTACAACTGCACCTCGCCCAACAACACTAAACATACTGTTGGACAATACAA
TAAAAAGTCCAGCATTATCTTCCTTCCTGACACCTTCTTTAGAAGAACTACAACCGATTT
TACGTTCAGAGGTGAAAAAAATTCTTCAACACCTGAAAGCGTCTCCACAGACTCCTGGAA
GCTTCCTCAATCCTAAGCATGTTACTGAAGAACAAGAGAGGTTCGCTAATGTTTTTACTC
AGAAGTTGAATGAGCTACGGGATGCATCTAGTTTTGCCTCTCTGACTGCGGCTCTTAGTC
CTGTTACTTCTGCGGTAAATAATAGTGGTTTGTACAATATTAATTTGGCTGATTTCAACT
CTCAAAATCTACCAAACTTTGCCGAACTATGTCGTCAGGCAAGTCAAAGTGGAATCAACA
CAACTCCAGCATCTATACTTTTTTACTCGCCAGCTTGCTTCGATGCTCAGTCTTTCCCGA
GTGTTCAG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10742#0      ------------------------------------------------------------
consensus_10742#1      CTATTAAACTTACAACTGCACCTCGCCCAACAACACTAAACATACTGTTGGACAATACAA 60
                                                                                   

consensus_10742#0      ------------------------------------------------------------
consensus_10742#1      TAAAAAGTCCAGCATTATCTTCCTTCCTGACACCTTCTTTAGAAGAACTACAACCGATTT 120
                                                                                   

consensus_10742#0      ------------------------------------------------------------
consensus_10742#1      TACGTTCAGAGGTGAAAAAAATTCTTCAACACCTGAAAGCGTCTCCACAGACTCCTGGAA 180
                                                                                   

consensus_10742#0      ---------------------------CAGAATTTGGCACG---AGGAGCGTTTTTACTC 30
consensus_10742#1      GCTTCCTCAATCCTAAGCATGTTACTGAAGAACAAGAGAGGTTCGCTAATGTTTTTACTC 240
                                                   ****   *  * *      *  **********

consensus_10742#0      AGAAGTTGAATGAGCTACGGGATGCATCTAGTTTTGCCTCTCTGACTGCGGCTCTTAGTC 90
consensus_10742#1      AGAAGTTGAATGAGCTACGGGATGCATCTAGTTTTGCCTCTCTGACTGCGGCTCTTAGTC 300
                       ************************************************************

consensus_10742#0      CTGTTACTTCTGCGGTAAATAATAGTGGTTTGTACAATATTAATTTGGCTGATTTCAACT 150
consensus_10742#1      CTGTTACTTCTGCGGTAAATAATAGTGGTTTGTACAATATTAATTTGGCTGATTTCAACT 360
                       ************************************************************

consensus_10742#0      CTCAAAATCTACCAAACTTTGCCGAACTATGTCGTCAGGCAAGTCAAAGTGGAATCAACA 210
consensus_10742#1      CTCAAAATCTACCAAACTTTGCCGAACTATGTCGTCAGGCAAGTCAAAGTGGAATCAACA 420
                       ************************************************************

consensus_10742#0      CAACTCCAGCATCTATACTTTTTTACTCGCCAGCTTGCTTCGATGCTCAGTCTTTCCCGA 270
consensus_10742#1      CAACTCCAGCATCTATACTTTTTTACTCGCCAGCTTGCTTCGATGCTCAGTCTTTCCCGA 480
                       ************************************************************

consensus_10742#0      GTGTTCAGACTGTTACTCCAGGTCTTGTTGCTTTTCAGCCTCAACAGACTGATTCGGTCA 330
consensus_10742#1      GTGTTCAG---------------------------------------------------- 488
                       ********                                                    

consensus_10742#0      ACTCAACGTCTGAACAGAGTATCACACTAACAAATTTACAAAATTCGCTTTCTATTTCTC 390
consensus_10742#1      ------------------------------------------------------------
                                                                                   

consensus_10742#0      TTCCCAATACTGTCCAACCAGTCACGGAAAGTGAAGTTACAACTGTTCAACTGCCTAACG 450
consensus_10742#1      ------------------------------------------------------------
                                                                                   

consensus_10742#0      GTTTGCGTCTTGGTATAACGACCAATGGTGCTTCACAAGCATCAGTTCTTCAGATGCTAG 510
consensus_10742#1      ------------------------------------------------------------
                                                                                   

consensus_10742#0      GTATTGAGCCCCAACCAGAGATTGTCCATCATGCCCATATTCAGAATCCATCTTTAGATC 570
consensus_10742#1      ------------------------------------------------------------
                                                                                   

consensus_10742#0      CGTCTCTTTGGCCTCTAAACATACAAACAAATTTACCCTCTAACGACACTTCCGATAGTC 630
consensus_10742#1      ------------------------------------------------------------
                                                                                   

consensus_10742#0      GTCGTACAGCTTCAGCAAGTTCACCACAAGACCCTGATGATGCTCGTCCTTCTTCAGTAG 690
consensus_10742#1      ------------------------------------------------------------
                                                                                   

consensus_10742#0      ATATTAATTTAGAGCAAAATGATCCGATGCGGGACGTCAGGTCATCTTCCGTTTCTTCTG 750
consensus_10742#1      ------------------------------------------------------------
                                                                                   

consensus_10742#0      TTTCTTCTTCGTCTCAAGGAAATAGTTCTAGAAACCTAGCGGTTTCTAATCTCAAGGACA 810
consensus_10742#1      ------------------------------------------------------------
                                                                                   

consensus_10742#0      CACGTTTGGATCCTACTGAGCAGTCGCGCATGCGGTTAGAACGGAAGAGAGCAAGAAACC 870
consensus_10742#1      ------------------------------------------------------------
                                                                                   

consensus_10742#0      GTGATGCGGCTCGTAAATGTAGGGAAAGAAAGATTCGTTTGATTAAAAGTTTGGAGAAAG 930
consensus_10742#1      ------------------------------------------------------------
                                                                                   

consensus_10742#0      ACGTCATTCATCTCTCCGAAGAAAACAGGGCGTTACGCAATCGATTATCTCGCAGCAGAA 990
consensus_10742#1      ------------------------------------------------------------
                                                                                   

consensus_10742#0      TTGAGGTAGAACGTCTGAAAATGTTTGTTGTCAATCATCTTGACAAGGACTGTCCTGCTT 1050
consensus_10742#1      ------------------------------------------------------------
                                                                                   

consensus_10742#0      TATCTAGTAAGGTAGCTTAAATCAGTCTTCACTAGTAGCTAGTTTAATTTTATCTTAACA 1110
consensus_10742#1      ------------------------------------------------------------
                                                                                   

consensus_10742#0      ATCCTCCTGCTTTCTTATTTTTTGTGTGAAGCGCCAATCGGTAATAAGTTAGTTAATTTC 1170
consensus_10742#1      ------------------------------------------------------------
                                                                                   

consensus_10742#0      GTATAATATTCACAAGTATTATCAGTCTAATTTACCTTGCTTCTTGCCATCCAAACTATA 1230
consensus_10742#1      ------------------------------------------------------------
                                                                                   

consensus_10742#0      TTAACTAGTGACTTTGTCCATGTGATTTTGTTCTGTGCACCCACTTGATAATATTCGCAC 1290
consensus_10742#1      ------------------------------------------------------------
                                                                                   

consensus_10742#0      TTCGTTTCCATTGTACAGACTCATCTACCTCATCGCTTTTGGCATCTAAAAGCTATCCTA 1350
consensus_10742#1      ------------------------------------------------------------
                                                                                   

consensus_10742#0      TTATAAGTCAGATTTTTGTTTGATATTTACTAACCTGTTGTCCAAAGATTATCTTGTGTG 1410
consensus_10742#1      ------------------------------------------------------------
                                                                                   

consensus_10742#0      CTATTTCAAAAAATCTAACTTATCTAGTCGAAAAAAAGTATAAAAA 1456
consensus_10742#1      ----------------------------------------------