cluster # 10745

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Schistosoma mansoni
cluster # 10745 cluster # 10745 Sequences # 21 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10745#0 length = 1830 sequences # 20

consensus_10745#1 length = 454 sequences # 1

consensusID : consensus_10745#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 20
consensus length = 1830
fasta sequence

                              [TAGTTTATCCACGCATAATAGTGGTTACTGAGTCGCATCGTTACAACGTCTTGTGGCATTTGACTTACATCTGACGTAATTATGGACAACTACAGAACGGAAGTAAACATACCGATATCAAGAGATAAGCGAACATTCGAGCAGCGCCGAAAGGATATGCTTAGTAATCTTGAACGTAGTTACAGCAAGCATTCAAGAACTGACATCCACAAGAATTCAAGTTCAGAATCTTCGATACCCTTAAGTGAATC-AACTATAGGGGGATCAAA--TCGTCATATTAGTGATTGGGACGATGAAGTCAATCGATGGATTAGTGAAACACGTAGCAAGTGGAGCGAAGATATGAAGCGAATGAGACAGTCCATGTTTGCTTTAGAG-CCTGTTGATGATTTTGATCTTGACCATTGGGGTAATTTTGAACCGATTCATTCACTTGATGATCCATCAACTATGATGGAACAAATGGAACGTCGAATGGAATCATTACGACAAAAAAATGGGAACTATGTCTAGTTTTGGTCCATCACATTTTTCTGGTCCTAATAGTTCTACTATGCAAACATCAAGTTCACGTATAACATCATCCACATCGCATAGCAGCGGTAGTGATCCAAAAAATTTGGTGACTAAAAGTAATGTTGTAGAATCTACACAACATACACGTACAGTAGATGGTGAGACAACAACAACTTCAAGTCATTCTAGTTCATCATCTAATACATCAGGATTACCAGGCAGTAAAATTAATTTAACTAATACTCCAGGAAGTTTAATTACACAAACGAGTGTTCCATGTGGTATGATGGATTTTCTCAAAGATGCCTATGAATTAGGTGATGATGGAAAGGTACATTTTAAAGTACGATTTGATGCAAAAGATTTTTTACCAGAAGATATTGAAGTGACTACGGTTGA-TAATCATCTACGAGTTCATGCTAAAAAATCAATTAAATCAGGCAATTCAACTACTATACGTGAATTTCATCGTTCTGTTGATTTACCACGATCAATTGATCATGAAAATTTTCAATGTCATATGACAGAGGATGGTGTATTGATACTAGATGCACC-CTGT-T-AAGCTCCTGACTATCGAACAATCACCTTTCAAGATGATCGTCAACTTGGCATCCGACCACGTGCTGAATCTGAGATAAAAGCCACTCCCAATAGTAATAAAACACCAGTCTGTTTAACTGTAACCGGTTGTTCTGAACCAACAATAATGAAAGATGGCATCAATGGAAGAAAACTACATCTTGAAGTCACTGTAGATCCAATTTATAAAGCTGATGAATTATGCGTTCGTATGGATTCTAATCGTATAGTTATAACTGGTTGTCAAAAGAAAACTGATGCAAAATCAACTTCCACTGCAGAATTCACTCAATCATTTGAAGTTCCAGAAACAGTAGATCCATTTTCAGTTACTGCTCAGTTAATTGGAAC-ACACTTGTCGTTGAAGCGCCATTATTATGCACAGTTTAAGTTGTGTAGGG--AAAAAACTTAATTCATCATGAACATTTTGTGTGTGCGTAGGATGGGTGGATAGTGGAGAGAAAGAGACAAAATAAAATGTGTTCTTTATAAATAAAATGTTTTTGTTAGTGACACAATAATGTGTTACATCACACAACAAATGTGTAGTTTTTTTTGTAGGGAAATTGGAACAACTTGATTCTTTAATCTCTTATTTGCTTTTATTCAAATATTATTTCTGCTATATTTTGTCGTTACAATTAATTTTTTTTCTACATCTAATCAATAATGACTGTCAATCATGAGATTGACATGCTTTTTTTCCCGAAAAAAAATTTGTCCAGTGTTTTCCAT]

[+] EMBL CD097799             [TAGTTTATCCACGCATAATAGTGGTTACTGAGTCGCATCGTTACAACGTCTTGTGGCATTTGACTTACATCTGACGTAATTATGGACAACTACAGAACGGAAGTAAACATACCGATATCAAGAGATAAGCGAACATTCGAGCAGCGCCGAAAGGATATGCTTAGTAATCTTGAACGTAGTTACAGCAAGCATTCAAGAACTGACATCCACAAGAATTCAAGTTCAGAATCTTCGATACCCTTAAGTGAATC AACTATAGGGGGATCAAA  TCGTCATATTAGTGATTGGGACGATGAAGTCAATCGATGGATTAGTGAAACACGTAGCAAGTGGAGCGAAGATATGAAGCGAATGAGACAGTCCATGTTTGCTTTAGAG CCTGTTGATGATTTTGATCTTGAACATTGGGGTAATTTTGAACCGATTCATTCACTTGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD169573             [                                                                               TTATGGACAACTACAGAACGGAAGTAAACATACCGATATCAAGAGATAAGCGAACATTCGAGCAGCGCCGAAAGGATATGCTTAGTAATCTTGAACGTAGTTACAGCAAGCATTCAAGAACTGACATCCACAAGAATTCAAGTTCAGAATCTTCGATACCCTTAAGTGAATC AACTATAGGGGGATCAAA  TCGTCATATTAGTGATTGGGACGATGAAGTCAATCGATGGATTAGTGAAACACGTAGCAAGTGGAGCGAAGATATGAAGCGAATGAGACAGTCCATGTTTGCTTTAGAG CCTGTTGATGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD062904             [                                                                                                                                              AGCGCCGAAAGGA ATGCTTAGTAATCTTGAACGTAGTTACAGCAAGCATTCAAGAACTGACATCCACAAGAATTCAAGTTCAGAATCTTCGATACCCTTAAGTGAATC AACTATAGGGGGATCAAA  TCGTCATATTAGTGATTGGGACGATGAAGTCAATCGATGGATTAGTGAAACACGTAGCAAGTGGAGCGAAGATATGAAGCGAATGAGACAGTTGATGTTTGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD062876             [                                                                                                                                                 GCCG AAGGCTATGCTTAGTAATCTTGAACGTAGTTACAGCAAGCATTCAAGAACTGACATCCACAAGAATTCAAGTTCAGAATCTTCGATACCCTTAAGTGAATC AACTATAGGGGGATCAAA  TCGTCATATTAGTGATTGGGACGATGAAGTCAATCGATGGATTAGTGAAACACGTAGCAAGTGGAGCGAAGATATGAAGCGAATGAGACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD063356             [                                                                                                                                                                                                                                                    GTGAATC AACTATAGGGGGATCAAA  TCGTCATATTAGTGATTGGGACGATGAAGTCAATCGATGGATTAGTGAAACACGTAGCAAGTGGAGCGAAGATATGAAGCGAATGAGACAGTCCATGTTTGCTTTAGAG CCTGTTGATGATTTTGATCTTGACCATTGGGGTAATTTTGAACCGATTCATTCACTTGATGATCCATCAACTATGATGGAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD063479             [                                                                                                                                                                                                                                                     TGAATCAAACTATAGGGGGATCAAATTTCGTCATATTAGTGATTGGGACGATGAAGTCAATCGATGGATTAGTGAAACACGTAGCAAGTGGAGCGAAGATATGAAGCGAATGAGACAGTCCATGTTTGCTTTAGAGCCCTGTTGATGATTTTGATCTTGACCATTGGGGTAATTTTGAACCGATTCATTCACTTGATGATCCATCAACTATGATGGAACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL BG931161             [                                                                                                                                                                                                                                                                                                     CGAAGAAGTCAATCGATGGATTTGTGAGACACGTAGCAAGTGGAGCGAAGATATGAAGCGAATGAGACAGTCCATGTTTGCTTTAGAG CCTGTTGATGATTTTGATCTTGACCATTGGGGTAATTTTGAACCGATTCATTCACTTGATGAc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD185438             [                                                                                                                                                                                                                                                                                                                                                                                                                                   TTGAACCGATTCATTCACTTGATGATCCATCAACTATGATGGAACAAATGGAACGTCGAATGGAATCATTACGACAAAAAAATGGGAACTATGTTTAGTTTTGGTCCATCACATTTTTCTGGTCCTAATAGTTCTACTATGCAAACATCAAGTTCACGTATAACATCATCCACATCGCATAGCAGCGGTAGTGATCCAAAAAATTTGGTGACTAAAAGTAATGTTGTAGAATCTACACAACATACACGTACAGTAGATGGTGAGACAACAACAACTTCAAGTCATTCTAGTTCATCATCTAATACATCAGGATTACCAGGCAGTAAAATTAATTTAACTAATACTCCAGGAAGTTTAATTACACAAACGAGTGTTCCATGTGGTATGATGGATTTTCTCAAAGATGCCTATGAATTANGTGATGATGGAAAGGTACATTTTAAAGTACGATTTGATGCAAAAGATTTTTTACCAGAAGATATTGAAGTGACTACGGTTGA TAATCATCTACGAGTTCATGCTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD185172             [                                                                                                                                                                                                                                                                                                                                                                                                                                   TTGAACCGATTCATTCACTTGATGATCCATCAACTATGATGGAACAAATGGAACGTCGAATGGAATCATTACGAC AAAAAATGGGAACTATGTCTAGTTTTGGTCCATCACATTTTTCTGGTCCTAATAGTTCTACTATGCAAACATCAAGTTCACGTATAACATCATCCACATCGCATAGCAGCGGTAGTGATCCAAAAAATTTGGTGACTAAAAGTAATGTTGTAGAATCTACACAACATACACGTACAGTAGATGGTGAGACAACAACAACTTCAAGTCATTCTAGTTCATCATCTAATACATCAGGATTACCAGGCAGTAAAATTAATTTAACTAATACTCCAGGAAGTTTAATTACACAAACGAGTGTTCCATGTGGTATGATGGATTTTCTCAAAGATGCCTATGAATTAGGTGATGATGGAAAGGTACATTTTAAAGTACGATTTGATGCANAAGATTTTTTACCAGAAGATATTGAAGTGACTACGGTTGA TAATCATCTACGAGTTCATGCTAAAn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD189618             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TGGAATCATTACGACAAAAAAATGGGAACTATGTCTAGTTTTGGTCCATCACATTTTTCTGGTCCTAATAGTTCTACTATGCAAACATCAAGTTCACGTATAACATCATCCACATCGCATAGCAGCGGTAGTGATCCAAAAAATTTGGTGACTAAAAGTAATGTTGTAGAATCTACACAACATACACGTACAGTAGATGGTGAGACAACAACAACTTCAAGTCATTCTAGTTCATCATCTAATACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD139663             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TAACTAATACTCCAGGAAGTTTAATTACACAAACGAGTGTTCCATGTGGTATGATGGATTTTCTCAAAGATGCCTATGAATTAGGTGATGATGGAAAGGTACATTTTAAAGTACGATTTGATGCAAAAGATTTTTTACCAGAAGATATTGAAGTGACTACGGTTGA TAATCATCTACGAGTTCATGCTAAAAAATCAATTAAATCAGGCAATTCAACTACTATACGTGAATTTCATCGTTCTGTTGATTTACCACGATCAATTGATCATGAAAATTTTCAATGTCATATGACAGAGGATGGTGTATTGATACTAGATGCACC CTGT T AAGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD139950             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AAGTGACTACGG TGANTAATCATCTACGAGTTCATGCTAAAAAATCAA TAAATCAGGCAATTCAACTACTATACGTGAATTTCATCGTTCTGTTGATTTACCACGATCAATTGATCATGAAAATTTTCAATGTCATATGACAGAGGATGGTGTATTGATACTAGATGCA C CTGT TAAAGCTCCTGACTATCGAACAATCACCTTTCAAGATGATCGTCAACTTGGCATCCGACCACGTGCTGAATCTGAGATAAAAGCCACTCCCAATAGTAATAAAACACCAGTCTGTTTAACTGTAACCGGTTGTTCTGAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD132273             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GTGTATTGATACTAGATGCACCTGTGTAG AAGCTCCTGACTATCGAACAATCACCTTTCAAGATGATCGTCAACTTGGCATCCGACCACGTGCTGAATCTGAGATGAAAGCCACTCCCAATAGTAATAAGACACCAGTCTGTTTAACTGTAACCGGTTGTTCTGAACCAACAATAATGAAAGATGGCATCAATGGAAGAAGACTACATCTTGAAGTCACTGTAGATCCAATTTATAAAGCTGATGAATTATGCGTTCGTATGGATTCTAATCGTATAGTTATAACTGGTTGTCAAAAGAAAACTGATGCAAAATCAACTTCCACTGCAGAATTCACTCAATCATc                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD084187             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GAACAATCACCTTTCAAGATGATCGTCAACTTGGCATCCGACCACGTGCTGAATCTGAGATAAAAGCCACTCCCAATAGTAATAAAACACCAGTCTGTTTAACTGTAACCGGTTGTTCTGAACCAACAATAATGAAAGATGGCATCAATGGAAGAAAACTACATCTTGAAGTCACTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD179917             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CGTCAACTTGGCATCCGACCACGTGCTGAATCTGAGATAAAAGCCACTCCCAATAGTAATAAAACACCAGTCTGTTTAACTGTAACCGGTTGTTCTGAACCAACAATAATGAAAGATGGCATCAATGGAAGAAAACTACATCTTGAAGTCACTGTAGATCCAATTTATAAAGCTGATGAATTATGCGTTCGTATGGATTCTAATCGTATAGTTATAACTGGTTGTCAAAAGAAAACTGATGCAAAATCAACTTCCACTGCAGAATTCACTCAATCATTTGAAAGTCCAGAAACAGTAGATCCATTTTCAGTTACTGCTCAG                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD179947             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CGTCAACTTGGCATCCGACCACGTGCTGAATCTGAGATAAAAGCCACTCCCAATAGTAATAAAACACCAGTCTGTTTAACTGTAACCGGTTGTTCTGAACCAACAATAATGAAAGATGGCATCAATGGAAGAAAACTACATCTTGAAGTCACTGTAGATCCAATTTATAAAGCTGATGAATTATGCGTTCGTATGGATTCTAATCGTATAGTTATAACTGGTTGTCAAAAGAAAACTGATGCAAAATCAACTTCCACTGCAGAATTCACTCAATCATTTGAAGTTCCAGAAACAGTAGATCCATTTTCAGTTACTGCTCAGTTAATTGGAAC ACACTTGTCGTTGAAGCGCCATTATTATGC                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD142794             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AGTTATACCTGGTTGTCAAAAGAAAACTGATGCAAAATCAACTTCCACTGCAGAATTCACTCAATCATTTGAAGTTCCAGAAACAGTAGATCCATTTTCAGTTACTGCTCAGTTAATTGGAACAACACTTGTCGTTGAAGCGCCATTATTATGCACAGTTTAAGTTGTGTAGGG  AAAAAACTTAATTCATCATGAACAT                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD179731             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CTCAGTTAATTGGAACAACACTTGTCGTTGAAGCGCCATTATTATGCACAGTTTAAGTTGTGTAGGG  AAAAAACTTAATTCATCATGAACATTTTGTGTGTGCGTAGGATGGGTGGATAGTGGAGAGAAAGAGACAAAATAAAATGTGTTCTTTATAAATAAAATGTTTTTGTTAGTGACACAATAATGTGTTACATCACACAACAAATGTGTAGTTTTTTTTGTAGGGAAATTGGAACAACTTGATTCTTTAATCTCTTATTTGCTTTTATTCAAATATTATTTCTGCTATATTTTGTCGTTACAATTAATTTTTTTTCTACATCTAATCAATAATGACTGTCAATCATGAGATTGACATGCTTTTTTTCCCGAAAAAAAATTTGTCCAGTGTTTTCCAT]
[-] EMBL CD195678             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AGCGCCATTATTATGCACAGTTTAAGTTGTGTAGGGAAAAAAAACTTAATTCATCATGAACATTTTGTGTGTGCGTAGGATGGGTGGATAGT GAGAGAAAGAGACAAAATAAAATGTGTTCTTTATAAATAAAATGTTTTTGTTAGTGACACAATAATGTGTTACATCACACAACAAATGTGTAGTTTTTTTT                                                                                                                                                                                  ]
[-] EMBL CD197440             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ATGTTTTTGTTAGTGACACAATAATGTGTTACATCACACAACAAATGTGTAGTTTTTTTTGTAGGGAAATTGGAACAAC TGATTCTTTAATATTTTATTTGCTTTTATTCAAATATTATTTCTGCCTCATTTTGTCGTTACAATTAATTTTTTTTCTACATCTAATCAATAATGACTGTCAATCATGAGATTGGCATGCTTTTTTTCCCGAAAAAAAATTTGTCCAGTGTTTTCC  ]




>consensus_10745#0
TAGTTTATCCACGCATAATAGTGGTTACTGAGTCGCATCGTTACAACGTCTTGTGGCATT
TGACTTACATCTGACGTAATTATGGACAACTACAGAACGGAAGTAAACATACCGATATCA
AGAGATAAGCGAACATTCGAGCAGCGCCGAAAGGATATGCTTAGTAATCTTGAACGTAGT
TACAGCAAGCATTCAAGAACTGACATCCACAAGAATTCAAGTTCAGAATCTTCGATACCC
TTAAGTGAATCAACTATAGGGGGATCAAATCGTCATATTAGTGATTGGGACGATGAAGTC
AATCGATGGATTAGTGAAACACGTAGCAAGTGGAGCGAAGATATGAAGCGAATGAGACAG
TCCATGTTTGCTTTAGAGCCTGTTGATGATTTTGATCTTGACCATTGGGGTAATTTTGAA
CCGATTCATTCACTTGATGATCCATCAACTATGATGGAACAAATGGAACGTCGAATGGAA
TCATTACGACAAAAAAATGGGAACTATGTCTAGTTTTGGTCCATCACATTTTTCTGGTCC
TAATAGTTCTACTATGCAAACATCAAGTTCACGTATAACATCATCCACATCGCATAGCAG
CGGTAGTGATCCAAAAAATTTGGTGACTAAAAGTAATGTTGTAGAATCTACACAACATAC
ACGTACAGTAGATGGTGAGACAACAACAACTTCAAGTCATTCTAGTTCATCATCTAATAC
ATCAGGATTACCAGGCAGTAAAATTAATTTAACTAATACTCCAGGAAGTTTAATTACACA
AACGAGTGTTCCATGTGGTATGATGGATTTTCTCAAAGATGCCTATGAATTAGGTGATGA
TGGAAAGGTACATTTTAAAGTACGATTTGATGCAAAAGATTTTTTACCAGAAGATATTGA
AGTGACTACGGTTGATAATCATCTACGAGTTCATGCTAAAAAATCAATTAAATCAGGCAA
TTCAACTACTATACGTGAATTTCATCGTTCTGTTGATTTACCACGATCAATTGATCATGA
AAATTTTCAATGTCATATGACAGAGGATGGTGTATTGATACTAGATGCACCCTGTTAAGC
TCCTGACTATCGAACAATCACCTTTCAAGATGATCGTCAACTTGGCATCCGACCACGTGC
TGAATCTGAGATAAAAGCCACTCCCAATAGTAATAAAACACCAGTCTGTTTAACTGTAAC
CGGTTGTTCTGAACCAACAATAATGAAAGATGGCATCAATGGAAGAAAACTACATCTTGA
AGTCACTGTAGATCCAATTTATAAAGCTGATGAATTATGCGTTCGTATGGATTCTAATCG
TATAGTTATAACTGGTTGTCAAAAGAAAACTGATGCAAAATCAACTTCCACTGCAGAATT
CACTCAATCATTTGAAGTTCCAGAAACAGTAGATCCATTTTCAGTTACTGCTCAGTTAAT
TGGAACACACTTGTCGTTGAAGCGCCATTATTATGCACAGTTTAAGTTGTGTAGGGAAAA
AACTTAATTCATCATGAACATTTTGTGTGTGCGTAGGATGGGTGGATAGTGGAGAGAAAG
AGACAAAATAAAATGTGTTCTTTATAAATAAAATGTTTTTGTTAGTGACACAATAATGTG
TTACATCACACAACAAATGTGTAGTTTTTTTTGTAGGGAAATTGGAACAACTTGATTCTT
TAATCTCTTATTTGCTTTTATTCAAATATTATTTCTGCTATATTTTGTCGTTACAATTAA
TTTTTTTTCTACATCTAATCAATAATGACTGTCAATCATGAGATTGACATGCTTTTTTTC
CCGAAAAAAAATTTGTCCAGTGTTTTCCAT

consensusID : consensus_10745#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 454
fasta sequence

                              [CTAGTAGCCAACCACCCTATGCTCGAACAATCACCTTTCAAGATGATCGTCAACTTGGCATCCGACCACGTGCTGAATCTGAGATAAAAGCCACTCCCAATAGTAATAAAACACCAGTCTGTTTAACTGTAACCGGTTGTTCTGGACCAACAATAATGAAAGATGGCATCAATGGAAGAAAACTACATCTTGAAGTCACTGTAGATCCAATTTATAAAGCTGATGAATTATGCGTTCGTATGGATTCTAATCGTATAGTTATAACTGGTTGTCAAAAGAAAACTGATGCAAAATCAACTTTCACTGCAGAATTCACTCAATCATTTGAAGTTCCAGAAACAGTAGATCCATTTTCAGTTACTGCTCAGTTAATTGGAACACACTTGTCGTTGAAGCGCCATTATTATGCACAGTTTAAGTTGTGTAGGAAAAAAACTATTCATCATGAACCTTT]

[+] EMBL CD162517             [CTAGTAGCCAACCACCCTATGCTCGAACAATCACCTTTCAAGATGATCGTCAACTTGGCATCCGACCACGTGCTGAATCTGAGATAAAAGCCACTCCCAATAGTAATAAAACACCAGTCTGTTTAACTGTAACCGGTTGTTCTGGACCAACAATAATGAAAGATGGCATCAATGGAAGAAAACTACATCTTGAAGTCACTGTAGATCCAATTTATAAAGCTGATGAATTATGCGTTCGTATGGATTCTAATCGTATAGTTATAACTGGTTGTCAAAAGAAAACTGATGCAAAATCAACTTTCACTGCAGAATTCACTCAATCATTTGAAGTTCCAGAAACAGTAGATCCATTTTCAGTTACTGCTCAGTTAATTGGAACACACTTGTCGTTGAAGCGCCATTATTATGCACAGTTTAAGTTGTGTAGGAAAAAAACTATTCATCATGAACCTTT]




>consensus_10745#1
CTAGTAGCCAACCACCCTATGCTCGAACAATCACCTTTCAAGATGATCGTCAACTTGGCA
TCCGACCACGTGCTGAATCTGAGATAAAAGCCACTCCCAATAGTAATAAAACACCAGTCT
GTTTAACTGTAACCGGTTGTTCTGGACCAACAATAATGAAAGATGGCATCAATGGAAGAA
AACTACATCTTGAAGTCACTGTAGATCCAATTTATAAAGCTGATGAATTATGCGTTCGTA
TGGATTCTAATCGTATAGTTATAACTGGTTGTCAAAAGAAAACTGATGCAAAATCAACTT
TCACTGCAGAATTCACTCAATCATTTGAAGTTCCAGAAACAGTAGATCCATTTTCAGTTA
CTGCTCAGTTAATTGGAACACACTTGTCGTTGAAGCGCCATTATTATGCACAGTTTAAGT
TGTGTAGGAAAAAAACTATTCATCATGAACCTTT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10745#0      TAGTTTATCCACGCATAATAGTGGTTACTGAGTCGCATCGTTACAACGTCTTGTGGCATT 60
consensus_10745#1      ------------------------------------------------------------
                                                                                   

consensus_10745#0      TGACTTACATCTGACGTAATTATGGACAACTACAGAACGGAAGTAAACATACCGATATCA 120
consensus_10745#1      ------------------------------------------------------------
                                                                                   

consensus_10745#0      AGAGATAAGCGAACATTCGAGCAGCGCCGAAAGGATATGCTTAGTAATCTTGAACGTAGT 180
consensus_10745#1      ------------------------------------------------------------
                                                                                   

consensus_10745#0      TACAGCAAGCATTCAAGAACTGACATCCACAAGAATTCAAGTTCAGAATCTTCGATACCC 240
consensus_10745#1      ------------------------------------------------------------
                                                                                   

consensus_10745#0      TTAAGTGAATCAACTATAGGGGGATCAAATCGTCATATTAGTGATTGGGACGATGAAGTC 300
consensus_10745#1      ------------------------------------------------------------
                                                                                   

consensus_10745#0      AATCGATGGATTAGTGAAACACGTAGCAAGTGGAGCGAAGATATGAAGCGAATGAGACAG 360
consensus_10745#1      ------------------------------------------------------------
                                                                                   

consensus_10745#0      TCCATGTTTGCTTTAGAGCCTGTTGATGATTTTGATCTTGACCATTGGGGTAATTTTGAA 420
consensus_10745#1      ------------------------------------------------------------
                                                                                   

consensus_10745#0      CCGATTCATTCACTTGATGATCCATCAACTATGATGGAACAAATGGAACGTCGAATGGAA 480
consensus_10745#1      ------------------------------------------------------------
                                                                                   

consensus_10745#0      TCATTACGACAAAAAAATGGGAACTATGTCTAGTTTTGGTCCATCACATTTTTCTGGTCC 540
consensus_10745#1      ------------------------------------------------------------
                                                                                   

consensus_10745#0      TAATAGTTCTACTATGCAAACATCAAGTTCACGTATAACATCATCCACATCGCATAGCAG 600
consensus_10745#1      ------------------------------------------------------------
                                                                                   

consensus_10745#0      CGGTAGTGATCCAAAAAATTTGGTGACTAAAAGTAATGTTGTAGAATCTACACAACATAC 660
consensus_10745#1      ------------------------------------------------------------
                                                                                   

consensus_10745#0      ACGTACAGTAGATGGTGAGACAACAACAACTTCAAGTCATTCTAGTTCATCATCTAATAC 720
consensus_10745#1      ------------------------------------------------------------
                                                                                   

consensus_10745#0      ATCAGGATTACCAGGCAGTAAAATTAATTTAACTAATACTCCAGGAAGTTTAATTACACA 780
consensus_10745#1      ------------------------------------------------------------
                                                                                   

consensus_10745#0      AACGAGTGTTCCATGTGGTATGATGGATTTTCTCAAAGATGCCTATGAATTAGGTGATGA 840
consensus_10745#1      ------------------------------------------------------------
                                                                                   

consensus_10745#0      TGGAAAGGTACATTTTAAAGTACGATTTGATGCAAAAGATTTTTTACCAGAAGATATTGA 900
consensus_10745#1      ------------------------------------------------------------
                                                                                   

consensus_10745#0      AGTGACTACGGTTGATAATCATCTACGAGTTCATGCTAAAAAATCAATTAAATCAGGCAA 960
consensus_10745#1      ------------------------------------------------------------
                                                                                   

consensus_10745#0      TTCAACTACTATACGTGAATTTCATCGTTCTGTTGATTTACCACGATCAATTGATCATGA 1020
consensus_10745#1      ------------------------------------------------------------
                                                                                   

consensus_10745#0      AAATTTTCAATGTCATATGACAGAGGATGGTGTATTGATACTAGATGCACCCTGTTAAGC 1080
consensus_10745#1      -----------------------------------------------CTAGTAGCCAACC 13
                                                                      *     *  ** *

consensus_10745#0      TCCTGACTATCGAACAATCACCTTTCAAGATGATCGTCAACTTGGCATCCGACCACGTGC 1140
consensus_10745#1      ACCCTATGCTCGAACAATCACCTTTCAAGATGATCGTCAACTTGGCATCCGACCACGTGC 73
                        **  *   ***************************************************

consensus_10745#0      TGAATCTGAGATAAAAGCCACTCCCAATAGTAATAAAACACCAGTCTGTTTAACTGTAAC 1200
consensus_10745#1      TGAATCTGAGATAAAAGCCACTCCCAATAGTAATAAAACACCAGTCTGTTTAACTGTAAC 133
                       ************************************************************

consensus_10745#0      CGGTTGTTCTGAACCAACAATAATGAAAGATGGCATCAATGGAAGAAAACTACATCTTGA 1260
consensus_10745#1      CGGTTGTTCTGGACCAACAATAATGAAAGATGGCATCAATGGAAGAAAACTACATCTTGA 193
                       *********** ************************************************

consensus_10745#0      AGTCACTGTAGATCCAATTTATAAAGCTGATGAATTATGCGTTCGTATGGATTCTAATCG 1320
consensus_10745#1      AGTCACTGTAGATCCAATTTATAAAGCTGATGAATTATGCGTTCGTATGGATTCTAATCG 253
                       ************************************************************

consensus_10745#0      TATAGTTATAACTGGTTGTCAAAAGAAAACTGATGCAAAATCAACTTCCACTGCAGAATT 1380
consensus_10745#1      TATAGTTATAACTGGTTGTCAAAAGAAAACTGATGCAAAATCAACTTTCACTGCAGAATT 313
                       *********************************************** ************

consensus_10745#0      CACTCAATCATTTGAAGTTCCAGAAACAGTAGATCCATTTTCAGTTACTGCTCAGTTAAT 1440
consensus_10745#1      CACTCAATCATTTGAAGTTCCAGAAACAGTAGATCCATTTTCAGTTACTGCTCAGTTAAT 373
                       ************************************************************

consensus_10745#0      TGGAACACACTTGTCGTTGAAGCGCCATTATTATGCACAGTTTAAGTTGTGTAGGGAAAA 1500
consensus_10745#1      TGGAACACACTTGTCGTTGAAGCGCCATTATTATGCACAGTTTAAGTTGTGTAGGAAAAA 433
                       ******************************************************* ****

consensus_10745#0      AACTTAATTCATCATGAACATTTTGTGTGTGCGTAGGATGGGTGGATAGTGGAGAGAAAG 1560
consensus_10745#1      AACT--ATTCATCATGAACCTTT------------------------------------- 454
                       ****  ************* ***                                     

consensus_10745#0      AGACAAAATAAAATGTGTTCTTTATAAATAAAATGTTTTTGTTAGTGACACAATAATGTG 1620
consensus_10745#1      ------------------------------------------------------------
                                                                                   

consensus_10745#0      TTACATCACACAACAAATGTGTAGTTTTTTTTGTAGGGAAATTGGAACAACTTGATTCTT 1680
consensus_10745#1      ------------------------------------------------------------
                                                                                   

consensus_10745#0      TAATCTCTTATTTGCTTTTATTCAAATATTATTTCTGCTATATTTTGTCGTTACAATTAA 1740
consensus_10745#1      ------------------------------------------------------------
                                                                                   

consensus_10745#0      TTTTTTTTCTACATCTAATCAATAATGACTGTCAATCATGAGATTGACATGCTTTTTTTC 1800
consensus_10745#1      ------------------------------------------------------------
                                                                                   

consensus_10745#0      CCGAAAAAAAATTTGTCCAGTGTTTTCCAT 1830
consensus_10745#1      ------------------------------