These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10747#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 21 consensus length = 427 fasta sequence [TCCGAATATTCTAATTGTCTAGCTGTTCAATTGAAAAATTTCTATTTAGAAATGAATTTCTTGACACTTTACGTAACTTTGGTATATACAATTCTTAGCGTTTACTCAGACATTGAACCACGTATACAAAAGGAATATTATTACAATTTACATGAAAATAATAGTCAAGCCAACCACAACAAGTTTCATGAGATGCCTGAATACGATGACCAACTTCCCGATTTTCCACATAAGCAATTAGAAGAAGAGCAGAATCCGTTTCACAAACTTTCCGAAGTTCTCAATTCTGGATCTGTCGTACCACTGTGGTTGGTGAACCCAATATACTATGTGTTAGAATTGTTTCCAAGAGCTATATCATATTACTTCAATTAAATGCAAGCTGACGAAAATATGTTGAATGATATCATATGATACATATTGACCA] [+] EMBL CD188334 [TCCGAATATTCTAATTGTCTAGCTGTTCAATTGAAAAATTTCTATTTAGAAATGAATTTCTTGACACTTTACGTAACTTTGGTATATACAATTCTTAGCGTTTACTCAGACATTGAACCACGTATACAAAAGGAATATTATTACAATTTACATGAAAATAATAGTCAAGCCAACCACAACAAGTTTCATGAGATGCCTGAATACGATGACCAACTTCCCGATTTTCCACATAAGCAATTAGAAGAAGAGCAGAATCCGTTTCACAAACTTTCCGAAGTTCTCAATTCTGGATCTGTCGTACCACTGTGGTTGGTGAACCCAATATACTATGTGTT ] [+] EMBL CD186467 [TCCGAATATTCTAATTGTCTAGCTGTTCAATTGAAAAATTTCTATTTAGAAATGAATTTCTTGACACTTTACGTAACTTTGGTATATACAATTCTTAGCGTTTACTCAGACATTGAACCACGTATACAAAAGGAATATTATTACAATTTACATGAAAATAATAGTCAAGCCAACCACAACAAGTTTCATGAGATGCCTGAATACGATGACCAACTTCCCGATTTTCCACATAAGCAATTAGAAGAAGAGCAGAATCCGTTTCACAAACTTTCCGAAGTTCTCAATTCTGG ] [-] EMBL CD186392 [ CCGAATATTCTAATTGTCTAGCTGTTCAATTGAAAAATTTCTATTTAGAAATGAATTTCTTGACACTTTACGTAACTTTGGTATATACAATTCTTAGCGTTTACTCAGACATTGAACCACGTATACAAAAGGAATATTATTACAATTTACATGAAAATAATAGTCAAGCCAACCACAACAAGTTTCATGAGATGCCTGAATACGATGACCAACTTCCCGATTTTCCACATAAGCAATTAGAAGAAGAGCAGAATCCGTTTCACAAACTTTCTGAAGTTCTCAATTCTGGA ] [-] EMBL CD186369 [ CCGAATATTCTAATTGTCTAGCTGTTCAATTGAAAAATTTCTATTTAGAAATGAATTTCTTGACACTTTACGTAACTTTGGTATATACAATTCTTAGCGTTTACTCAGACATTGAACCACGTATACAAAAGGAATATTATTACAATTTACATGAAAATAATAGTCAAGCCAACCACAACAAGTTTCATGAGATGCCTGAATACGATGACCAACTTCCCGATTTTCCACATAAGCAATTAGAAGAAGAGCAGAATCCGTTTCACAAACTTTCCGAAGTTCTCAATTCTGGA ] [+] EMBL CD188770 [ CCGAATATTCTAATTGTCTAGCTGTTCAATTGAAAAATTTCTATTTAGAAATGAATTTCTTGACACTTTACGTAACTTTGGTATATACAATTCTTAGCGTTTACTCAGACATTGAACCACGTATACAGAAGGAATATTATTACAATTTACATGAAAATAATAGTCAAGCCAACCACAACAAGTTTCATGAGATGCCTGAATACGATGACCAACTTCCCGATTTTCCACATAAGCAATTAGAAGAAGAGCAGAATCCGTTTCACAAACTTTCCGAAGTTCTCAATTCTGGATCTGTCGTACCACTGTGGTTGGTGAACCCAATATACTATGTGTTAGAATTGTTTCCAAG ] [-] EMBL CD186472 [ CCGAATATTCTAATTGTCTAGCTGTTCAATTGAAAAATTTCTATTTAGAAATGAATTTCTTGACACTTTACGTAACTTTGGTATATACAATTCTTAGCGTTTACTCAGACATTGAACCACGTATACAAAAGGAATATTATTACAATTTACATGAAAATAATAGTCAAGCCAACCACAACAAGTTTCATGAGATGCCTGAATACGATGACCAACTTCCCGATTTTCCACATAAGCAATTAGAAGAAGAGCAGAATCCGTTTCACAAACTTTCCGAAGTTCTCAATTCTGGA ] [-] EMBL CD186364 [ CCGAATATTCTAATTGTCTAGCTGTTCAATTGAAAAATTTCTATTTAGAAATGAATTTCTTGACACTTTACGTAACTTTGGTATATACAATTCTTAGCGTTTACTCAGACATTGAACCACGTATACAAAAGGAATATTATTACAATTTACATGAAAATAATAGTCAAGCCAACCACAACAAGTTTCATGAGATGCCTGAATACGATGACCAACTTCCCGATTTTCCACATAAGCAATTAGAAGAAGAGCAGAATCCGTTTCACAAACTTTCCGAAGTTCTCAATTCTGGA ] [+] EMBL CD190619 [ cggcttcTTCTAATTGTCTAGCTGTTCAATTGAAAAATTTCTATTTAGAAATGAATTTCTTGACACTTTACGTAACTTTGGTATATACAATTCTTAGCGTTTACTCAGACATTGAACCACGTATACAAAAGGAATATTATTACAATTTACATGAAAATAATAGTCAAGCCAACCACAACAAGTTTCATGAGATGCCTGAATACGATGACCAACTTCCCGATTTTCCACATAAGCAATTAGAAGAAGAGCAGAATCCGTTTCACAAACTTTCCGAAGTTCTCAATTCTGGATCTGTCGTACCACTGTGGTTGGTGAACCCAATATACTATGTGTTAG ] [+] EMBL CD190633 [ TAGCTGTTCAATTGAAAAATTTCTATTTAGAAATGAATTTCTTGACACTTTACGTAACTTTGGTATATACAATTCTTAGCGTTTACTCAGACATTGAACCATGTATACAAAAGGAATATTATTACAATTTACATGAAAATAATAGTCAAGCCAACCACAACAAGTTTCATGAGATGCCTGAATACGATGACCAACTTCCCGATTTTCCACATAAGCAATTAGAAGAAGAGCAGAATCCGTTTCACAAACTTTCCGAAGTTCTCAATTCTGGATCTGTCGTACCACTGTGGTTGGTGAACCCAATATACTATGTGTTAG ] [+] EMBL CD190816 [ TAGCTGTTCAATTGAAAAATTTCTATTTAGAAATGAATTTCTTGACACTTCACGTAACTTTGGTATATACAATTCTTAGCGTTTACTCAGACATTGAACCACGTATACAAAAGGAATATTATTACAATTTACATGAAAATAATAGTCAAGCCAACCACAACAAGTTTCATGAGATGCCTGAATACGACGACCAACTTCCCGATTTTCCACATAAGCAATTAGAAGAAGAGCAGAATCCGTTTCACAAACTTTCCGAAGTTCTCAATTCTGGATCTGTCGTACCACTGTGGTTGGTGAACCCAATATACTATGTGTTAG ] [+] EMBL CD190833 [ TAGCTGTTCAATTGAAAAATTTCTATTTAGAAATGAATTTCTTGACACTTTACGTAACTTTGGTATATACAATTCTTAGCGTTTACTCAGACATTGAACCACGTATACAAAAGGAGTATTATTACAATTTACATGAAAATAATAGTCAAGCCAACCACAACAAGTTTCATGAGATGCCTGAATACGATGACCAACTTCCCGATTTTCCACATAAGCAATTAGAAGAAGAGCAGAATCCGTTTCACAAACTTTCCGAAGTTCTCAATTCTGGATCTGTCGTACCACTGTGGTTGGTGAACCCAATATACTATGTGTTAG ] [+] EMBL CD190475 [ TAGCTGTTCAATTGAAAAATTTCTATTTAGAAATGAATTTCTTGACACTTTACGTAACTTTGGTATATACAATTCTTAGCGTTTACTCAGACATTGAACCACGTATACAAAAGGAATATTATTACAATTTACATGAAAATAATAGTCAAGCCAACCACAACAAGTTTCATGAGATGCCTGAATACGATGACCAACTTCCCGATTTTCCACATAAGCAATTAGAAGAAGAGCAGAATCCGTTTCACAAACTTTCCGAAGTTCTCAATTCTGGATCTGTCGTACCACTGTGGTTGGTGAACCCAATATACTATGTGTTAG ] [+] EMBL CD190819 [ TAGCTGTTCAATTGAAAAATTTCTATTTAGAAATGAATTTCTTGACACTTTACGTAACTTTGGTATATACAATTCTTAGCGTTTACTCAGACATTGAACCACGTATACAAGAGGAGTATTATTACAATTTACATGAAAATAATAGTCAAGCCAACCACAACAAGTTTCATGAGATGCCTGAATACGATGACCAACTTCCCGATTTTCCACATAAGCAATTAGAAGAAGAGCAGAATCCGTTTCACAAACTTTCCGAAGTTCTCAATTCTGGATCTGTCGTACCACTGTGGTTGGTGAACCCAATATACTATGTGTTAG ] [+] EMBL CD190428 [ TAGCTGTTCAATTGAAAAATTTCTATTTAGAAATGAATTTCTTGACACTTTACGTAACTTTGGTATATACAATTCTTAGCGTTTACTCAGACATTGAACCACGTATACAAAAGGAATATTATTACAATTTACATGAAAATAATAGTCGAGCCAACCACAACAAGTTTCATGAGATGCCTGAATACGATGACCAACTTCCCGATTTTCCACATAAGCAATTAGAAGAAGAGCAGAATCCGTTTCACAAACTTTCCGAAGTTCTCAATTCTGGATCTGTCGTACCACTGTGGTTGGTGAACCCAATATACTATGTGTTAG ] [+] EMBL AA629507 [ GTTCAATTGAAAAATTTCTATTTAGAAATGAATTTCTTGACACTTTACGTAACTTTGGTATATACAATTCTTAGCGTTTACTCAGACATTGAACCACGTATACAAAAGGAATATTATTACAATTTACATGAAAATAATAGTCAAGCCAACCACAACAAGTTTCATGAGATGCCTGAATACGATGACCAACTTCCCGATTTTCCACACAAGCAATTAGAGGAGGAGCAGAATCCGTTTCACAAACTTTCCGAAGTTCTCAATTCTGGATCTGTCGTACCACTGTGGTTGGTGAACCCAATATACTATGTGTTAGAATTGTTTCCAAGAGCTATATCATATTACTTCAAT ] [-] EMBL CD084374 [ cctagtggGAAATATTTCTATTTAGAAATGAATTTCTTGACACTTTACGTAACTCTGGTATATACAATTCTTAGCGTTTACTCAGACATTGAACCACGTATACAAAAGGAATATTATTACAATTTACATGAAAATAATAGTCAAGCCAACCACTACAAGT ] [-] EMBL CD186385 [ TATTTAGAAATGAATTTCTTGACACTTTACGTAACTTTGGTATATACAATTCTTAGCGTTTACTCAGACATTGAACCACGTATACAAAAGGAATATTATTACAATTTACATGAAAATAATAGTCAAGCCAACCACAACAAGTTTCATGAGATGCCTGAATACGATGACCAACTTCCCGATTTTCCACATAAGCAATTAGAAGAAGAGCAGAATCCGTTTCACAAACTTTCCGAAGTTCTCAATTCTGGA ] [+] EMBL CD179323 [ CACGTATACAAAAGGAATATTATTACAATTTACATGAAAATAATAGTCAAGCCAACCACAACAAGTTTCATGAGATGCCTGAATACGATGACCAACTTCCCGATTTTCCACATAAGCAATTAGAAGAAGAGCAGAATCCGTTTCACAAACTTTCCGAAGTTCTCAATTCTGGATC ] [+] EMBL AA629472 [ gcacgagATTACAATTTACATGAAAATAATAGTCAAGCCAACCACAACAAGTTTCATGAGATGCCTGAATACGATGACCAACTTCCCGATTTTCCACATAAGCAATTAGAAGAAGAGCAGAATCCGTTTCACAAACTTTCCGAAGTTCTCAATTCTGGATCTGTCGTACCACTGTGGTTGGTGAACCCAATATACTATGTGTTAGAATTGTTTCCAAGAGCTATATCATATTACTTCAATTAAATGCAAGCTGACGAAAATATGTTGAATGATATCATATGATACATATTGACCA] [-] EMBL CD190677 [ TAATAGTCAAGCCAACCGCAGCAAGTTTCATGAGATGCCTGAATACGATGACCAACTTCCCGATTTTCCACATAAGCAATTAGAAGAAGAGCAGAATCCGTTTCACAAACTTTCCGAAGTTCTCAATTCTGGATCTGTCGTACCACTGTGGTTGGTGAACCCAATATACTATGTGTTAGA ] [-] EMBL CD179278 [ CCAACCACAACAAGTTTCATGAGATGCCTGAATACGATGACCAACTTCCCGATTTTCCACATAAGCAATTAGAAGAAGAGCAGAATCCGTTTCACAAACTTTCCGAAGTTCTCAATTCTGGGTCT ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||