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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10748#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 18 consensus length = 2251 fasta sequence
[GATGCGTAGATTCTCCGGTTACAGTATGTCGTGATATTCATGGACATTTCTACGATTTAATCGAATTGTTCAAGGTTGGTGGAGATGTACCGGACACTAACTATCTCTTCCTCGGAGATTTTGTTGATCGCGGATATCACAGCGTCGAGACATTCCTTCTTCTCCTTGCACTGAAGGTCAGGTATCCAGACAGAATTACACTCATACGAGGCAACCATGAAAGTCGGCAGATAACAATGGTTTACGGATTTTATGAAGAATGTCTGAGGAAGTACGGCTCAGCGATGGTCTGGCGACAATGTACTGAGATATTTGATTATCTGTGCCTTTCTGCTATTATCGACGGAAGGATATTTTGTGTTCATGGAGGCCTATCACCTACAATTACAACATTGGATCAAATCCGTACCATTGATCGTAAACAGGAAGTCCCACATGATGGTCCAATGTGTGATCTCTTGTGGTCTGATCCGG-AAGAGACTGCTGGTTGGGGGGTGAGCCCCAGAGGTGCTGGCTATTTATTTGGCTCTGACGTTGTAGCCAATTTTAATCAATTAAATCGAATCGATTTCATATGTCGTGCACATCAATTAGTTATGGAAGGTTATCGTTGGCATTTTCATGAAAGTGTTCTTACTGTATGGTCTGCTCCAAATTATTGTTATCGTTGTGGTAATGTTGCCGCTATTTTACGTTTAAATGATCGATTAGATAAAGAATTTTCTATATTTGAAGCTTCACTACAGGATGCCCGGGGTATACCAGCTCGTCGACCAATACCAGACTATTTCCTCTAAAGCATATAAAAACAAACAAACAAAATGTGTTCTATTTTCAATGATAATAATTACAGTTATTATTATTTCCCTTGTTTATAAACCCCATTCCCCTCCCTGTCAATTTTGTAAAATTTTTACTTCTATTTATCGGTGTGTTTTTGTAAAATGTTTTCTTCCCGCCGCCCACCCCCTCTCTACCCCCCTACCCCACTCACCCACCTATCCAATATTGAACTATTATTCCCAAGATTCATACATTGTTTTGTTTGCATTTTTGTTTTTCTCTTTTTGATATCCAATTAAACTAAATTTTTTCTATTAAGTAATTAAATTTTGTATTTGTGTATACAATAATACAATAACTGTTTTGGGGGTGGAAGTGGAAAGAATAAATTTTCTTTTAAAGAAATAACATATTTATATTATGATTATTGTTATTAAATGTAAATTATACTGAATATGTAAAGTATATTTTAAAAAAAAAGAAGAAAAGAAATCAATGATTCAGGGAATCATCATCTG------TCTTCTTCTTCTTCTTCTCCTCGTTGTTGTTGTTGTTTAAGTTTACCATTGTGCATTTCTTAATTCAGCAACTAATTTGATAAAATCATGATGACTTGCATAGAGTTGTAAATCAGAACTGATATCTGTCCAACGTACAGCTTCTGCATCATCACCTGCAGTTAATGGGAATAATGCTAGACAATTGCCAATATCATCGTGAAAATTTACTGCCACAGTTTCCATCCATGCATTATCCGTATTACGTGGATCGTCGACATAACC-TTATAAATCTCAACTCCATGATGAAAAGCATCATCAACACGTTTTACGATCGCTTCTAACTCCTTTGATGAAGCTGTTGTAGAATTTAAAGCTTCTTCAGAAAATTCTCTTTTTAAAGTAGAGGTATAATTTTCACCAGCGTCTACCATACCTCCAGGGATAGCCCATTGACCAGAATCTTTCCGACGAATAGAAACAAACTGAAGAATTGGACGTCCAGTAGTTTTATTTAAACATCGACTGCCTGAGTTGTCAAGTTTCCATCGTGTTACAATTGGATCAGCAGCATGATTAGGACCCCAACGACCAAGAACACCACGTCCAGTAATTCCTGTACGTCCACGAGGATTTAATGGTAATCCATTAGTACTGAATTTATATTGACCCATAAAACTTGTTCTATCAAGTATTCCATCAATTTTATTAAACTGAATAGCTTTATATTTTTCATCATGGTTATCTGGATCAGCCCATGGCTTTTTAGATATTCCTGGAGCTGTGTACGCTACCGGATGATATTCACTCCAAGATACACTCCAACTGACTTTATCATCCGGAACAGGATATCTTTGTATGTCAGAAGTACGAGGGTATGGAGAATTTCTACATTTTACATGTAAATTGGCCACAGTTACAGACGCCATTTTTGAAATGTCGACAATCTGTAAAATAAGTCGAACTCGGTA]
[+] EMBL CD152297 [GATGCGTAGATTCTCCGGTTACAGTATGTCGTGATATTCATGGACATTTCTACGATTTAATCGAATTGTTCAAGGTTGGTGGAGATGTACCGGACACTAACTATCTCTTCCTCGGAGATTTTGTTGATCGCGGATATCACAGCGTCGAGACATTCCTTCTTCTCCTTGCACTGAAGGTCAGGTATCCAGACAGAATTACACTCATACGAGGCAACCATGAAAGTCGGCAGATAACAATGGTTTACGGATTTTATGAAGAATGTCTGAGGAAGTACGGCTCAGCGATGGTCTGGCGACAATGTACTGAGATATTTGATTATCTGTGCCTTTCTGCTATTATCGACGGAAGGATATTTTGTGTTCATGGAGGCCTATCACCTACAATTACAACATTGGATCAAATCCGTACCATTGATCGTAAACAGGAAGTCCCACATGATGGTCCAATGTGTGATCTCTTGTGGTCTGATCCGGAAAGAGACTGCTGGTTGGGG ]
[+] EMBL CD147618 [ TCGGCAGATAACAATGGTTTACGGATTTTATGAAGAATGTCTGAGGAAGTACGGCTCAGCGATGGTCTGGCGACAATGTACTGAGATATTTGATTATCTGTGCCTTTCTGCTATTATCGACGGAAGGATATCTTGTGTTCATGGAGGCCTATCACCTACAATTACAACATTGGATCAAATCCGCACCATTGATCGTAAACAGGAAGTCCCACATGATGGTCCAATGTGTGATCTCTTGTGGTCTGATCCGG AAGAGACTGCTGGTTGGGGGGTGAGCCCCAGAGGTGCTGGCTATTTATTTGGCTCTGACGTTGTAGCCAATTTTAATCAATTAAATCGAATCGATTTCATATGTCGTGCACATCAATTAGTTATGGA ]
[+] EMBL CD079715 [ TGTCTGAGGAAGTACGGCTCAGCGATGGTCTGGCGACAATGTACTGAGATATTTGATTATCTGTGCCTTTCTGCTATTATCGACGGAAGGATATTTTGTGTTCATGGAGGCCTATCACCTACAATTACAACATTGGATCAAATCCGTACCATTGATCGTAAACAGGAAGTCCCACATGATGGTCCAATGTGTGATCTCTTGTGGTCTGATCCGG AAGAGACTGCTGGTTGGGGGGTGAGCCCCAGAGGTGCTGGCTATTTATTTGGCTCTGACGTTGTAGCCAATTTTAATCAATTAAATCGAATCGATTTCATATGTCGTGCACATCAATTAGTTATGGAAGGTTATCGTTGGCATTTTCATGAAAGTGTTCTTACTGTATGGTCTGCTCCAAATTATTGTTATCGTTGTGGTAATGTTGCCGCTATTTTACGTTTAAATGATCGATTAGATAAAGAATTTTCTATATTTGAAGCTTCACTACAGGATGCCCGGGGTATACCAGCTCGTCGACCAATACCAGACTATTTCCTCTAAAGCATATAAAAACAAACAAACAAAATGTGTTCTATTTTCAATGATAATAATTACAGTTATTATTATTTCCCTTGTTTATAAACCCCATTCCCCTCCCTGTCAATTNTGTAAAATTTTTACTTCTATTTATCGGTGTGTTTTgt ]
[+] EMBL CD078742 [ TGTCTGAGGAAGTACGGCTCAGCGATGGTCTGGCGACAATGTACTGAGATATTTGATTATCTGTGCCTTTCTGCTATTATCGACGGAAGGATATTTTGTGTTCATGGAGGCCTATCACCTACAATTACAACATTGGATCAAATCCGTACCATTGATCGTAAACAGGAAGTCCCACATGATGGTCCAATGTGTGATCTCTTGTGGTCTGATCCGG AAGAGACTGCTGGTTGGGGGGTGAGCCCCAGAGGTGCTGGCTATTTATTTGGCTCTGACGTTGTAGCCAATTTTAATCAATTAAATCGAATCGATTTCATATGTCGTGCACATCAATTAGTTATGGAAGGTTATCGTTGGCATTTTCATGAAAGTGTTCTTACTGTATGGTCTGCTCCAAATTATTGTTATCGTTGTGGTAATGTTGCCGCTATTTTACGTTTAAATGATCGATTAGATAAAGAATTTTCTATATTTGAAGCTTCACTACAGGATGCCCGGNGTATACCAGCTCGTCGACCAATACCAGACTATTTCCTC ]
[+] EMBL CD198621 [ GTACCATTGATCGTAAACAGGAAGTCCCACATGATGGTCCAATGTGTGATCTCTTGTGGTCTGATCCGG AAGAGACTGCTGGTTGGGGGGTGAGCCCCAGAGGTGCTGGCTATTTATTTGGCTCTGACGTTGTAGCCAATTTTAATCAATTAAATCGAATCGATTTCATATGTCGTGCACATCAATTAGTTATGGAAGGTTATCGTTGGCATTTTCATGAAAGTGTTCTTACTGTATGGTCTGCTCCAAATTATTGTTATCGTTGTGGTAATGTTGCCGCTATTTTACGTTTAAATGATCGATTAGATAAAGAATTTTCTATATTTGAAGCTTCACTACAGGATGCCCGGGGTATACCAGCTCGTCGACCAATACCAGACTATTTCCTCTTAAGCATATAAAAACAAACAAACCAAATGTGTTCTAT ]
[-] EMBL CD198671 [ TCTCTTGTGGTCTGATCCGG AAGAGACTGCTGGTTGGGGAATGAGCCCCAGAGGTGCTGGCTATTTACTTGGCTCTGACGTTGTAGCCAATTTTAATCAATTAAATCGAATCGATTTCATATGTCGTGCACATCAATTAGTTAAGGAAGGTTATCGTTGGCATTTTCATGAAAGTGTTCTTACTGTATGGTCTGCTCCAAATTATTGTTATCGTTGTGGTAATGTTGCCGCTATTTTACGTTTAAATGATCGATTAGATAAAGAATTTTCTATATTTGAAGCTTCACTACAGGATGCCCGGGGTATACCAGCTCGTCGACCAATACCAGACTATTTCCTCTAAAGCATATAAAAACAAACAAACAAAATGTGTTCTATTTTCAATGATAATAATTACAGTTATTATTATTTCCCTTGTT ]
[-] EMBL CD073973 [ TTATCGTTGGCATTTTCATGAAAGTGTTCTTACTGTATGGTCTGCTCCAAATTATTGTTATCGTTGTGGTAATGTTGCCGCTATTTTACGTTTAAATGATCGATTAGATAAAGAATTTTCTATATTTGAAGCTTCACTACAGGATGCCCGGGGTATACCAGCTCGTCGACCAATACCAGACTATTTCCTCTAAAGCATATAAAAACAAACAAACAAAATGTGTTCTATTTTCAATGATAATAATTACAGTTATTATTATTTCCCTTGTTTATAAACCCCATTCCCCTCCCTGTCAATTTTGTAAAATTTTTACTTCTATTTATCGGTGTGTTTTTGTAAAATGTTTTCTTCCCGCCGCCCACCCCCTCTCTACCCCCCTACCCCACTCACCCACCTATCCAATATTGAACTATTATTCCCAAGATTCATACATTGTTTTGTTTGCATTTTTGTTTTTCTCTTTTTGATATCCAATTAAACTAAATTTTTTCTATTAAGTAATTAAATTTTGTATTTGTGTATACAATAATACAATAACTGTTTTGGGGGTGGAAGTGGAAAGAATAAATTTTCTTTTAAAGAAATAACATATTTATATTATGATTATTGTTATTAAATGTAAATTATACTGAATATGTAAA ]
[+] EMBL CD114607 [ CTATTTTACGTTTAAATGATCGATTAGATAAAGAATTTTCTATATTTGAAGCTTCACTACAGGATGCCCGGGGTATACCAGCTCGTCGACCAATACCAGACTATTTCCTCTAAAGCATATAAAAACAAACAAACAAAATGTGTTCTACTTTCAATGATAATAATTACAGTTATTATTATTTCCCTTGTTTATAAACCCCATTCCCCTCCCTGTCAATTTTGTAAAATTTTTACTTCTATTTATCGGTGTGTTTTTGTAAAATGTTTTCTTCCCGCCGCCC ]
[-] EMBL CD079654 [ ATTAAATTTTGTATTTGTGTATACAATAATACAATAACTGTTTTGGGGGTGGAAGTGGAAAGAATAAATTTTCTTTTAAAGAAATAACATATTTATATTATGATTATTGTTATTAAATGTAAATTATACTGAATATGTAAAGTATATTTTAAAAAAAAAGAAGAAAAGAAATCAATGTCTCAGGGAATCATCATCTG TCTTCTTCTTCTTCTTCTCCTCGTTGTTGTTGTTGTTTAAGTTTACCATTGTGCATTTCTTAATTCAGCAACTAATTTGATAAAATCATGATGACTTGCATAGAGTTGTAAATCAGAACTGATATCTGTCCAACGTACAGCTTCTGCATCATCACCTGCAGTTAATGGGAATAATGCTAGACAATTGCCAATATCATCGTGAAAATTTACTGCCACAGTTTCCATCCATGCATTATCCGTATTACGTGGATCGTCGACATAACC TTATAAATCTCA ]
[-] EMBL CD113213 [ ATTCAGGGAATCATCATCTGTCT TCTTCTTCTTCTTCTTCTCCTCGTTGTTGTTGTTGTTTAAGTTTACCATTGTGCATTTCTTAATTCAGCAACTAATTTGATAAAATCATGATGACTTGCATAGAGTTGTAAATCAGAACTGATATCTGTCCAACGTACAGCTTCTGCATCATCACCTGCAGTTAATGGGAATAATGCTAGACAATTGCCAATATCATCGTGAAAATTTACTGCCACAGTTTCCATCCATGCATTATCCGTATTACGTGGATCGTCGACATAACCTTTATAAATCTCAACTCCATGATGAAAAGCATCATCAACACGTTTTACGATCGCTTCTAACTCCTTTGATGAAGCTGTTGTAGAATTTAAAGCTTCTTCAGAAAATTCTCTTTTTAAAGTAGAGGTATAATTTTCACCAGCGT ]
[-] EMBL CD113158 [ ATTCAGGGAATCATCATCTG TCTTCTTCTTCTTCTTCTCCTCGTTGTTGTTGTTGTTTAAGTTTACCATTGTGCATTTCTTAATTCAGCAACTAATTTGATAAAATCATGATGACTTGCATAGAGTTGTAAATCAGAACTGATATCTGTCCAACGTACAGCTTCTGCATCATCACCTGCAGTTAATGGGAATAATGCTAGACAATTGCCAATATCATCGTGAAAATTTACTGCCACAGTTTCCATCCATGCATTATCCGTATTACGTGGATCGTCGACATAACCTTTATAAATCTCAACTCCATGATGAAAAGCATCATCAACACGTTTTACGATCGCTTCTAACTCCTTTGATGAAGCTGTTGTAGAATTTAAAGCTTCTTCAGAAAATTCTCTTTTTAAAGTAGAGGTATAATTTTCACCAGCGT ]
[-] EMBL CD113207 [ ATTCAGGGAATCATCATCTGTCTTCTTCTTCTTCTTCTTCTTCTCCTCGTTGTTGTTGTTGTTTAAGTTTACCATTGTGCATTTCTTAATTCAGCAACTAATTTGATAAAATCATGATGACTTGCATAGAGTTGTAAATCAGAACTGATATCTGTCCAACGTACAGCTTCTGCATCATCACCTGCAGTTAATGGGAATAATGCTAGACAATTGCCAATATCATCGTGAAAATTTACTGCCACAGTTTCCATCCATGCATTATCCGTATTACGTGGATCGTCGACATAACCTTTATAAATCTCAACTCCATGATGAAAAGCATCATCAACACGTTTTACGATCGCTTCTAACTCCTTTGATGAAGCTGTTGTAGAATTTAAAGCTTCTTCAGAAAGTTCTCTTTTTAAAGTAGAGGTATAATTTTCACCAGCGT ]
[-] EMBL CD114683 [ AGCAACTAATTTGATAAAATCATGATGACTTGCATAGAGTTGTAAATCAGAACTGATATCTGTCCAACGTACAGCTTCTGCATCATCACCTGCAGTTAATGGGAATAATGCTAGACAATTGCCAATATCATCGTGAAAATTTACTGCCACAGTTTCCATCCATGCATTATCCGTATTACGTGGATCGTCGACATAACCTTTATAAATCTCAACTCCATGATGAAAAGCATCACCAACACGTTTTACGATCGCTTCTAACTCCTTTGATGAAGCTGTTGTAGAATTTAAAGCTTCTTCAGAAAATTCTCTTTTTAAAGTAGAGGTATAATTTTCACCAGCGTCTACCATACCTCCAGGGATAGCCCATTGACCAGA ]
[-] EMBL CD153765 [ TTCTAACTCCTTTGATGAAGCTGTTGTAGAATTTAAAGCTTCTTCAGAAAATTCTCTTTTTAAAGTAGAGGTATAATTTTCACCAGCGTCTACCATACCTCCAGGGATAGCCCATTGACCAGAATCTTTCCGACGAATAGAAACAAACTGAAGAATTGGACGTCCAGTAGTTTTATTTAAACATCGACTGCCTGAGTTGTCAAGTTTCCATCGTGTTACAATTGGATCAGCAGCATGATTAGGACCCCAACGACCAAGAACACCACGTCCAGTAATTCCTGTACGTCCACGAGGATTTAATGGTAATCCATTAGTACTGAATTTATATTGACCCATAAAACTTGTTCTATCAAGTATTCCATCAATTTTATTAAACTGAATAGCTTTATATTTTTCATCATGGTTATCTGGATCAGCCCCTGGCTTTTTAGATATTCCTGGAGCTGTGTACGCTACCGGATGATATTCACTCCAAG ]
[-] EMBL CD083517 [ TTTGATGAAGCTGTTGTAGAATTTAAAGCTTCTTCAGAAAATTCTCTTTTTAAAGTAGAGGTATAATTTTCACCAGCGTCTACCATACCTCCAGGGATAGCCCATTGACCAGAATCTTTCCGACGAATAGAAACAAACTGAAGAATTGGACGTCCAGTAGTTTTATTTAAACATCGACTGCCTGAGTTGTCAAGTTTCCATCGTGTTACAATTGGATCAGCAGCATGATTAGGACCCCAACGACCAAGAACACCACGTCCAGTAATTCCTGTACGTCCACGAGGATTTAATGGTAATCCATTAGTACTGAATTTATATTGACCCATAAAACTTGTTCTATCAAGTATTCCATCAATTTTATTAAACTGAATAGCTTTATATTTTTCATCATGGTTATCTGGATCAGCCCATGGCTTTTTAGATATTCCTGGAGCTGTGTACGCTACCGGATGATATTCACTCCAAGATACACTCCAACTGAC TTATCATCCGGAACA GATATCT ]
[+] EMBL CD153295 [ AAGCTTCTTCAGAAAATTCTCTTTTTAAAGTAGAGGTATAATTTTCACCAGCGTCTACCATACCTCCAGGGATAGCCCATTGACCAGAATCTTTCCGACGAATAGAAACAAACTGAAGAATTGGACGTCCAGTAGTTTTATTTAAACATCGACTGCCTGAGTTGTCAAGTTTCCATCGTGTTACAATTGGATCAGCAGCATGATTAGGACCCCAACGACCAAGAACACCACGTCCAGTAATTCCTGTACGTCCACGAGGATTTAATGGTAATCCATTAGTACTGAATTTATATTGACCCATAAAACTTGTTCTATCAAGTATTCCATCAATTTTATTAAACTGAATAGCTTTATATTTTTCATCATGGTTATCTGGATCAGCCCATGGCTTTTTAGATATTCCTGGAGCTGTGTACGCTACCGGATGATATTCACTCCAAGATACACTCCAACTGACTNTATCATCCGGAACAGGATATCTTTGTATGTCAGAAGTACGAGGGTATGGAGAATTTCTACATTNTACATGTAAATTGGCCACAGTTACAGACGCCATTTTTGAAATGTCGACAATCTGTAAAATAAGTCGAACTCGGTA]
[-] EMBL CD190407 [ TCTTTTTAAAGTAGAGGTATAATTTTCACCAGCGTCTACCATACCTCCAGGGATAGCCCATTGACCAGAATCTTTCCGACGAATAGAAACAAACTGAAGAATTGGACGTCCAGTAGTTTTATTTAAACATCGACTGCCTGAGTTGTCAAGTTTCCATCGTGTTACAATTGGATCAGCAGCATGATTAGGACCCCAACGACCAAGAACA CACG CCAGTAA TCCTGTACGTCCACGAGGATTTAATGGTAATCCATTAGTACTGAATTTATATTGACCCATAAAACTTGTTCTATCAAGTATTCCATCAATTTTATTAAACTGAATAGCTTTATATTCTTCATCATGGTTATCTGGATCAGCCCATGGCTTTTTAGATATTCCTGGAGCTGTGTACGCTACCGGATGATATTCACTCCAAGATACACTCCAACTGACTTTATCATCCGGAACAGGATATCTTTGTATGTCAGAAGTACGAGGGTATGGAGAATTTCTACATTTTACATGTAAATTGGCCACAGTT ]
[-] EMBL CD140094 [ cgGTACGTCCACGAGGATTTAATGGTAATCCATTAGTACTGAATTTATATTGACCCATAAAACTTGTTCTATCAAGTATTCCATCAATTTTATTAAACTGAATAGCTTTATATTTTTCATCATGGTTATCTGGATCAGCCCATGGCTTTTTAGATATTCCTGGAGCTGTGTACGCTACCGGATGATATTCACTCCAAGATACACTCCAACTGACTTTATCATCCGGAACAGGATATCTTTGTATGTCAGAAGTACGAGGGTATGGAGAATTTCTACATTTTACATGTAAATTGGCCACAGTTACAGACGCCATTTTTGAAATGTCGACAATCTGTAAAATAAGTCat ]
consensusID : consensus_10748#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 458 fasta sequence
[CCACGGAGTTTGGGCTCCATTCAGGGAATCATCATCTGTCTTCTTCTTCTTCTCCTCGTTGTTGTTGTTGTTTAAGTTTACCATTGTGCATTTCTTAATTCAGCAACTAATTTGATAAAATCATGATGACCTGCATAGAGTTGTAAATCAGAACTGATATCTGTCCAACGTACAGCTTCTGCATCATCACCTGCAGTTAATGGGAATAATGCTAGACAATTGCCAATATCATCGTGAAAATTTACTGCCACAGTTTCCATCCATGCATTATCCGTATTACGTGGATCGTCGACATAACCTTTATAAATCTCAACTCCGTGATGAAAAGCATCATCAACACGTTTTACGATCGCTTCTAACTCCTTTGATGAAGCTGTTGTAGAATTTAAAGCTTCTTCAGAAAATTCTCTTTTTAAAGTAGAGGTATAATTTTCACCAGCGTCTACCATACCTCCGTG]
[+] EMBL CD144811 [CCACGGAGTTTGGGCTCCATTCAGGGAATCATCATCTGTCTTCTTCTTCTTCTCCTCGTTGTTGTTGTTGTTTAAGTTTACCATTGTGCATTTCTTAATTCAGCAACTAATTTGATAAAATCATGATGACCTGCATAGAGTTGTAAATCAGAACTGATATCTGTCCAACGTACAGCTTCTGCATCATCACCTGCAGTTAATGGGAATAATGCTAGACAATTGCCAATATCATCGTGAAAATTTACTGCCACAGTTTCCATCCATGCATTATCCGTATTACGTGGATCGTCGACATAACCTTTATAAATCTCAACTCCGTGATGAAAAGCATCATCAACACGTTTTACGATCGCTTCTAACTCCTTTGATGAAGCTGTTGTAGAATTTAAAGCTTCTTCAGAAAATTCTCTTTTTAAAGTAGAGGTATAATTTTCACCAGCGTCTACCATACCTCCGTG]
consensusID : consensus_10748#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 436 fasta sequence
[AAGTTTACCATTGTGCATTTCTTAATTCAGCAACTAATTTGATAAAATCATGATGACTAGCATAGAGTTGTAAATCAGAACTGATATCTGTCCAACGTACAGCTTCTGCATCATCACCTGCAGTTAATGGGAATAATGCTAGACAATTGCCAATATCATCGTGAAAATTTACTGCCACAGTTTCCATCCATGCATTATCCGTATTACGTGGATCGTCGACATAACCTTTATAAATCTCAACTCCATGATGAAAAACATAAAGCTATTCAGTTTAATAAAATTGATGGAATACTTGATAGAACAAGTTTTATGGGTCAATATAAATTCAGTACTAATGGATTACCATTAAATCCTCGTGGACGTACAGGAATTACTGGACGTGGTGTTCTTGGTCGTTGGGGTCCTAATCATGCTGCTGATCCAATTGTAACACGAT]
[+] EMBL CD160950 [AAGTTTACCATTGTGCATTTCTTAATTCAGCAACTAATTTGATAAAATCATGATGACTAGCATAGAGTTGTAAATCAGAACTGATATCTGTCCAACGTACAGCTTCTGCATCATCACCTGCAGTTAATGGGAATAATGCTAGACAATTGCCAATATCATCGTGAAAATTTACTGCCACAGTTTCCATCCATGCATTATCCGTATTACGTGGATCGTCGACATAACCTTTATAAATCTCAACTCCATGATGAAAAACATAAAGCTATTCAGTTTAATAAAATTGATGGAATACTTGATAGAACAAGTTTTATGGGTCAATATAAATTCAGTACTAATGGATTACCATTAAATCCTCGTGGACGTACAGGAATTACTGGACGTGGTGTTCTTGGTCGTTGGGGTCCTAATCATGCTGCTGATCCAATTGTAACACGAT]
consensusID : consensus_10748#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 284 fasta sequence
[GGGGGGCGTGTGGACCCCCCTACCCCACTCACCCACCTATCCAATATTGAACTATTATTCCCAAGATTCATACATTGTTTTGTTTGCATTTTTGTTTTTCTCTTTTTGATATCCAATTAAACTAAATTTTTTCTATTAAGTAATTAAAAATTGTATTTGTGTATACAATAATACAATAACTGTTTTGGGGGTGGAAGTGGAAAGAATAAATTTTCTTTTAAAGAAATAACATATTTATATTATGATTATTGTTATTAAATGTAAATTATACTGAATATGTAAAG]
[-] EMBL CD073204 [GGGGGGCGTGTGGACCCCCCTACCCCACTCACCCACCTATCCAATATTGAACTATTATTCCCAAGATTCATACATTGTTTTGTTTGCATTTTTGTTTTTCTCTTTTTGATATCCAATTAAACTAAATTTTTTCTATTAAGTAATTAAAAATTGTATTTGTGTATACAATAATACAATAACTGTTTTGGGGGTGGAAGTGGAAAGAATAAATTTTCTTTTAAAGAAATAACATATTTATATTATGATTATTGTTATTAAATGTAAATTATACTGAATATGTAAAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10748#0 GATGCGTAGATTCTCCGGTTACAGTATGTCGTGATATTCATGGACATTTCTACGATTTAA 60
consensus_10748#3 ------------------------------------------------------------
consensus_10748#1 ------------------------------------------------------------
consensus_10748#2 ------------------------------------------------------------
consensus_10748#0 TCGAATTGTTCAAGGTTGGTGGAGATGTACCGGACACTAACTATCTCTTCCTCGGAGATT 120
consensus_10748#3 ------------------------------------------------------------
consensus_10748#1 ------------------------------------------------------------
consensus_10748#2 ------------------------------------------------------------
consensus_10748#0 TTGTTGATCGCGGATATCACAGCGTCGAGACATTCCTTCTTCTCCTTGCACTGAAGGTCA 180
consensus_10748#3 ------------------------------------------------------------
consensus_10748#1 ------------------------------------------------------------
consensus_10748#2 ------------------------------------------------------------
consensus_10748#0 GGTATCCAGACAGAATTACACTCATACGAGGCAACCATGAAAGTCGGCAGATAACAATGG 240
consensus_10748#3 ------------------------------------------------------------
consensus_10748#1 ------------------------------------------------------------
consensus_10748#2 ------------------------------------------------------------
consensus_10748#0 TTTACGGATTTTATGAAGAATGTCTGAGGAAGTACGGCTCAGCGATGGTCTGGCGACAAT 300
consensus_10748#3 ------------------------------------------------------------
consensus_10748#1 ------------------------------------------------------------
consensus_10748#2 ------------------------------------------------------------
consensus_10748#0 GTACTGAGATATTTGATTATCTGTGCCTTTCTGCTATTATCGACGGAAGGATATTTTGTG 360
consensus_10748#3 ------------------------------------------------------------
consensus_10748#1 ------------------------------------------------------------
consensus_10748#2 ------------------------------------------------------------
consensus_10748#0 TTCATGGAGGCCTATCACCTACAATTACAACATTGGATCAAATCCGTACCATTGATCGTA 420
consensus_10748#3 ------------------------------------------------------------
consensus_10748#1 ------------------------------------------------------------
consensus_10748#2 ------------------------------------------------------------
consensus_10748#0 AACAGGAAGTCCCACATGATGGTCCAATGTGTGATCTCTTGTGGTCTGATCCGGAAGAGA 480
consensus_10748#3 ------------------------------------------------------------
consensus_10748#1 ------------------------------------------------------------
consensus_10748#2 ------------------------------------------------------------
consensus_10748#0 CTGCTGGTTGGGGGGTGAGCCCCAGAGGTGCTGGCTATTTATTTGGCTCTGACGTTGTAG 540
consensus_10748#3 ------------------------------------------------------------
consensus_10748#1 ------------------------------------------------------------
consensus_10748#2 ------------------------------------------------------------
consensus_10748#0 CCAATTTTAATCAATTAAATCGAATCGATTTCATATGTCGTGCACATCAATTAGTTATGG 600
consensus_10748#3 ------------------------------------------------------------
consensus_10748#1 ------------------------------------------------------------
consensus_10748#2 ------------------------------------------------------------
consensus_10748#0 AAGGTTATCGTTGGCATTTTCATGAAAGTGTTCTTACTGTATGGTCTGCTCCAAATTATT 660
consensus_10748#3 ------------------------------------------------------------
consensus_10748#1 ------------------------------------------------------------
consensus_10748#2 ------------------------------------------------------------
consensus_10748#0 GTTATCGTTGTGGTAATGTTGCCGCTATTTTACGTTTAAATGATCGATTAGATAAAGAAT 720
consensus_10748#3 ------------------------------------------------------------
consensus_10748#1 ------------------------------------------------------------
consensus_10748#2 ------------------------------------------------------------
consensus_10748#0 TTTCTATATTTGAAGCTTCACTACAGGATGCCCGGGGTATACCAGCTCGTCGACCAATAC 780
consensus_10748#3 ------------------------------------------------------------
consensus_10748#1 ------------------------------------------------------------
consensus_10748#2 ------------------------------------------------------------
consensus_10748#0 CAGACTATTTCCTCTAAAGCATATAAAAACAAACAAACAAAATGTGTTCTATTTTCAATG 840
consensus_10748#3 ------------------------------------------------------------
consensus_10748#1 ------------------------------------------------------------
consensus_10748#2 ------------------------------------------------------------
consensus_10748#0 ATAATAATTACAGTTATTATTATTTCCCTTGTTTATAAACCCCATTCCCCTCCCTGTCAA 900
consensus_10748#3 ------------------------------------------------------------
consensus_10748#1 --------------------------------------CCACGGAGTTTGGGCTCCATTC 22
consensus_10748#2 ------------------------------------------------------------
consensus_10748#0 TTTTGTAAAATTTTTACTTCTATTTATCGGTGTGTTTTTGTAAAATGTTTTCTTCCCGCC 960
consensus_10748#3 ------------------------------------------------------------
consensus_10748#1 AGGGAATCATCATCTGTCTTCTTCTTCTTCTCCTCGTTGTTGTTGTTGTTTAAGTTTACC 82
consensus_10748#2 ---------------------------------------------------AAGTTTACC 9
consensus_10748#0 GCCCACCCCCTCTCTACCCCCCTACCCCACTCACCCACCTAT-----CCAATATTGAACT 1015
consensus_10748#3 --GGGGGGCGTGTGGACCCCCCTACCCCACTCACCCACCTAT-----CCAATATTGAACT 53
consensus_10748#1 ATTGTGCATTTCTTAATTCAGCAACTAATTTGATAAAATCATGATGACCTGCATAGAGTT 142
consensus_10748#2 ATTGTGCATTTCTTAATTCAGCAACTAATTTGATAAAATCATGATGACTAGCATAGAGTT 69
* * * * * ** * * * ** * ** ** *
consensus_10748#0 ATTATTCCCAAGATTCATACATTGTTTTGTTTGCA-TTTTTGTTTT-TCTCTTTTTGATA 1073
consensus_10748#3 ATTATTCCCAAGATTCATACATTGTTTTGTTTGCA-TTTTTGTTTT-TCTCTTTTTGATA 111
consensus_10748#1 GTAAAT--CAGAACTGATAT-CTGTCCAACGTACAGCTTCTGCATCATCACCTGCAGTTA 199
consensus_10748#2 GTAAAT--CAGAACTGATAT-CTGTCCAACGTACAGCTTCTGCATCATCACCTGCAGTTA 126
* * * ** * * *** *** * ** ** ** * ** * * * **
consensus_10748#0 TCC--AATTAAACTAAATTTTTTCTATTAA-GTAATTAAATTTTGTATTTGT-GTATACA 1129
consensus_10748#3 TCC--AATTAAACTAAATTTTTTCTATTAA-GTAATTAAAAATTGTATTTGT-GTATACA 167
consensus_10748#1 ATGGGAATAATGCTAGACAATTGCCAATATCATCGTGAAAATTTACTGCCACAGTTTCCA 259
consensus_10748#2 ATGGGAATAATGCTAGACAATTGCCAATATCATCGTGAAAATTTACTGCCACAGTTTCCA 186
*** * *** * ** * * ** * * *** ** ** * **
consensus_10748#0 ATAATACAATAACTGTTTTGGGGGTGGAAGTGGAAAGA-----ATAAATTTT--CTTTTA 1182
consensus_10748#3 ATAATACAATAACTGTTTTGGGGGTGGAAGTGGAAAGA-----ATAAATTTT--CTTTTA 220
consensus_10748#1 TCCATGCATTATCCGTATTACGTGGATCGTCGACATAACCTTTATAAATCTCAACTCCGT 319
consensus_10748#2 TCCATGCATTATCCGTATTACGTGGATCGTCGACATAACCTTTATAAATCTCAACTCCAT 246
** ** ** * ** ** * * * * * ****** * **
consensus_10748#0 AAGAAATAACATATTTATATTATGATTATTGTTATTAAATGTAAATTATACTGAATA--- 1239
consensus_10748#3 AAGAAATAACATATTTATATTATGATTATTGTTATTAAATGTAAATTATACTGAATA--- 277
consensus_10748#1 GATGAAAAGCATCAT-CAACACGTTTTACGATCGCTTCTAACTCCTTTGATGAAGCT-GT 377
consensus_10748#2 GATGAAAAACATAAAGCTATTCAGTTTAATAAAATTGATGGAATACTTGATAGAACAAGT 306
* ** * *** * *** * * * *
consensus_10748#0 TGTAAAGTATATTTTAAAAAAAAAGAAGAAAAGAAATCAATGATTCAGGGAATCATCATC 1299
consensus_10748#3 TGTAAAG----------------------------------------------------- 284
consensus_10748#1 TGTAGAATTTAAAGCTTCTTCAG----AAAATTCTCTTTTTAAA-----GTAGAGGTATA 428
consensus_10748#2 TTTATGGGTCAATATAAATTCAGTACTAATGGATTACCATTAAATCCTCGTGGACGTACA 366
* **
consensus_10748#0 TGTCTTCTTCTTCTTCTTCTCCTCGTTGTTGTTGTTGTTTAAGTTTACCATTGTGCATTT 1359
consensus_10748#3 ------------------------------------------------------------
consensus_10748#1 ATTTTCACCAG-CGTC-TACCATACCTCCGTG---------------------------- 458
consensus_10748#2 GGAATTACTGGACGTGGTGTTCTTGGTCGTTGGGGTCCTAATCATGCTGCTGATCCAATT 426
consensus_10748#0 CTTAATTCAGCAACTAATTTGATAAAATCATGATGACTTGCATAGAGTTGTAAATCAGAA 1419
consensus_10748#3 ------------------------------------------------------------
consensus_10748#1 ------------------------------------------------------------
consensus_10748#2 GTAACACGAT-------------------------------------------------- 436
consensus_10748#0 CTGATATCTGTCCAACGTACAGCTTCTGCATCATCACCTGCAGTTAATGGGAATAATGCT 1479
consensus_10748#3 ------------------------------------------------------------
consensus_10748#1 ------------------------------------------------------------
consensus_10748#2 ------------------------------------------------------------
consensus_10748#0 AGACAATTGCCAATATCATCGTGAAAATTTACTGCCACAGTTTCCATCCATGCATTATCC 1539
consensus_10748#3 ------------------------------------------------------------
consensus_10748#1 ------------------------------------------------------------
consensus_10748#2 ------------------------------------------------------------
consensus_10748#0 GTATTACGTGGATCGTCGACATAACCTTATAAATCTCAACTCCATGATGAAAAGCATCAT 1599
consensus_10748#3 ------------------------------------------------------------
consensus_10748#1 ------------------------------------------------------------
consensus_10748#2 ------------------------------------------------------------
consensus_10748#0 CAACACGTTTTACGATCGCTTCTAACTCCTTTGATGAAGCTGTTGTAGAATTTAAAGCTT 1659
consensus_10748#3 ------------------------------------------------------------
consensus_10748#1 ------------------------------------------------------------
consensus_10748#2 ------------------------------------------------------------
consensus_10748#0 CTTCAGAAAATTCTCTTTTTAAAGTAGAGGTATAATTTTCACCAGCGTCTACCATACCTC 1719
consensus_10748#3 ------------------------------------------------------------
consensus_10748#1 ------------------------------------------------------------
consensus_10748#2 ------------------------------------------------------------
consensus_10748#0 CAGGGATAGCCCATTGACCAGAATCTTTCCGACGAATAGAAACAAACTGAAGAATTGGAC 1779
consensus_10748#3 ------------------------------------------------------------
consensus_10748#1 ------------------------------------------------------------
consensus_10748#2 ------------------------------------------------------------
consensus_10748#0 GTCCAGTAGTTTTATTTAAACATCGACTGCCTGAGTTGTCAAGTTTCCATCGTGTTACAA 1839
consensus_10748#3 ------------------------------------------------------------
consensus_10748#1 ------------------------------------------------------------
consensus_10748#2 ------------------------------------------------------------
consensus_10748#0 TTGGATCAGCAGCATGATTAGGACCCCAACGACCAAGAACACCACGTCCAGTAATTCCTG 1899
consensus_10748#3 ------------------------------------------------------------
consensus_10748#1 ------------------------------------------------------------
consensus_10748#2 ------------------------------------------------------------
consensus_10748#0 TACGTCCACGAGGATTTAATGGTAATCCATTAGTACTGAATTTATATTGACCCATAAAAC 1959
consensus_10748#3 ------------------------------------------------------------
consensus_10748#1 ------------------------------------------------------------
consensus_10748#2 ------------------------------------------------------------
consensus_10748#0 TTGTTCTATCAAGTATTCCATCAATTTTATTAAACTGAATAGCTTTATATTTTTCATCAT 2019
consensus_10748#3 ------------------------------------------------------------
consensus_10748#1 ------------------------------------------------------------
consensus_10748#2 ------------------------------------------------------------
consensus_10748#0 GGTTATCTGGATCAGCCCATGGCTTTTTAGATATTCCTGGAGCTGTGTACGCTACCGGAT 2079
consensus_10748#3 ------------------------------------------------------------
consensus_10748#1 ------------------------------------------------------------
consensus_10748#2 ------------------------------------------------------------
consensus_10748#0 GATATTCACTCCAAGATACACTCCAACTGACTTTATCATCCGGAACAGGATATCTTTGTA 2139
consensus_10748#3 ------------------------------------------------------------
consensus_10748#1 ------------------------------------------------------------
consensus_10748#2 ------------------------------------------------------------
consensus_10748#0 TGTCAGAAGTACGAGGGTATGGAGAATTTCTACATTTTACATGTAAATTGGCCACAGTTA 2199
consensus_10748#3 ------------------------------------------------------------
consensus_10748#1 ------------------------------------------------------------
consensus_10748#2 ------------------------------------------------------------
consensus_10748#0 CAGACGCCATTTTTGAAATGTCGACAATCTGTAAAATAAGTCGAACTCGGTA 2251
consensus_10748#3 ----------------------------------------------------
consensus_10748#1 ----------------------------------------------------
consensus_10748#2 ----------------------------------------------------
|
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||