These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10754#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 2058 fasta sequence [AAGATGTCATCGAACTACTTAGTTTCATGCTGGACGCTGATTTTAACGAACAACTATTGAAGTGTTACCCAAAGGAAATATATAAAATAAACGATATCTGCAACACACTAACATTTGAGGACTGTCCTGCTGAAATTTTGGAGAACATGAACGGTTATATGTGTGGACATTACCCACCACTCATTGCTATTCCCCGTACTCGACATTTATCTTCATCATTGGCCGATTTAGGTCAGCTTATGCTTCAGTCAAAGTTTGCTCGCTGCCGAACAAGATTTGTTGTCCCTTCCTTTTCTTTTAAACATAAGAATATATGCCCGGTGTAGTACTTTAAGCGGCCCATTAGAGTTTTATGGTCGTCAAGTTGCTACAGCTGCAGGTTTTACTTTTGATGGACATGTCAGTAACTCTTCAGGAGGAGAGCTTCCAGATACAAGTTTTGAGACAGAAAACGGACGTCAGAGTTTGGAAAAATTACGTGATGATGATTGTGAATTAATTCGTCGTTTAAATGTCACCTATATTTGTGATTTTATGT-TGGAGTACAGAAAGAT-AAAATGTTGGGTT-CCAATTAGTTCATCAGAAAAGGTGGACCAACAAGGACGCTATAATGA-TTTCGTAGTCATACCTCTCCCTTATCCTGGCAGCGAATTTTTCCGTATATGGCGTGATTCTGGTTATGCTATGCATCATGTATACTTTGACTGGAATCGGTCAGGAGTT-GAAGTGTCTGTCAATCCAAGCCTTATACCAAAAACTCTGTTATCTAGCTCAGTAGAATGGAGCTTGTACAAGTCCTGGGATATTTATACAATCACTGTGAACTACATGAAGTTGCTTCTTGGCTTACTCTACGAAGGTGCTGGAGGTTTACTATTACATTGTGTTTCTGGATGGGATCGTACACCGCTGTTTATTTGTCTACTTCGTTGTTTACTTTGGGCTGATGATTTAATGCATTGTAGTTTAACACCTATTCAAATGTTATATCTTACTCTTGGATATGATTGGTT-CTTGTTTGGTCATAAATTGAAAACACGTATGGAATTGGGTGAAGAAATACTCCGATTTACTTTTCAATTTATCGGTGAAATGGCTAAATGTACAGAATTATCACTTCGCAGAGTCTATGATATTCACGTTACCGATGGGTCTAAAAGTTCAGATTCGGATGATTCTTCGTTTATTGATTTACGTTCCAGTGATGATTTACAACCCTTAAGGCAATCACGATTGGAAGAACTATCAAATTTATTCTTTGAATTTTGGAATGAAGAAATTAAAAGACGTGAAGTTCAATCTACTATCAACAGTATTGGACCCATTACCAACGAATCTGTTGTTGTGGATAAAAATGCTCAGTTGATATCGAATTCTAAAGAAAAATCAACTTTTAACAATGATGATGAATCATCAACAGGTCATGAAAACTATGCATATAGAAATAGCAATAAACCCTCTGAAAATCAAAATTCCATTGTTTTTCAAATATCAAATGCTTTAAATTCAGCTGTATCAGTGGTTACCTCAAATTTTGTCACACCATTATTATCATCCTCATCGTCGTCATCAGTAGCAGCATCATCACCAGTATCATCTTCAAACTCAATCAGAACAGTAAATGAGGGTATCGAAGATCCCCCTACTACCACATGAGTCACTATTCTTTCTTTGTTTGATTTTTCCATTGCAACATCTTATCTATGTATTTTGTTGTTATTTTATTCTTTTTTTATGATCAATATGTC-GTAGTAGAATTAACAATACAATAAGTTGATTAAGCAAAAAAATGTCCGTTTATCTTTTTAATTTCTTCAAGATCATCAAATAAGTAACTCTATCAATTCTATATATTTAAATTGTAATATTTAATACATTATAACATTGATATAATGACTTGTCTTTTTTGTGTGTATCCTTTACCTTC-AACAGTAATGATGATAATTGTTATTTGTTTGACCGACTGCTTTAGTTAATTCATTCCATTCAGTTTTTTTAATGAAGA-TCCCACTATTAC-TACATATAGAAAATTGGTTTCTGGTGAATT-AAAATATATAT] [+] EMBL BF936698 [AAGATGTCATCGAACTACTTAGTTTCATGCTGGACGCTGATTTTAACGAACAACTATTGAAGTGTTACCCAAAGGAAATATATAAAATAAACGATATCTGCAACACACTAACATTTGAGGACTGTCCTGCTGAAATTTTGGAGAACATGAACGGTTATATGTGTGGACATTACCCACCACTCATTGCTATTCCCCGTACTCGACATTTATCTTCATCATTGGCCGATTTAGGTCAGCTTATGCTTCAGTCAAAGTTTGCTCGCTGCCGAACAAGATTTGTTGTCCCTTCCTTTTCTTTTAAACATAAGAATATATGCCCGGTGTAGTACTTTAAGCGGCCCATTAGAGTTTTATGGTCGTCAAGTTGCTACAGCTGCAGGTTTTACTTTTGATGGACATGTCAGTAACTCTTCAGGAGGAGAGCTTCCAGATACAAGTTTTGAGACAGAAAACGGACGTCAGAGTTTGGAAAAATTACGTGATGATGATTGTGAATTAATTCGTCGTTTAAATGTCACCTATATTTGTGATTTTATGTGTGGAGTACAGAAAGATAAAAATGTTGGGTTCCCAATTAGTTCATCAGAAAAGGTGGACCAACAAGGACGCTATAATGATTTTCGTAGTCATACCTCTCCCTTATCCTGGCAGCGAATTTTTCCGTATATGGCGTGATTCTGGTTATGCTATGCATCATGTATACTTTGACTGGAATCCGTCAGGAGTTGGAAGTGTCTGTCAA ] [-] EMBL CD188066 [ ggatATGTACGGGAAGAGGTACGGACATTACCCACCACTCATTGCTATTCCCCGTACTCGACATTTATCTTCATCATTGGCCGATTTAGGTCAGCTTATGCTTCAGTCAAAGTTTGCTCGCTGCCGAACAAGATTTGTTGTCCCTTCCTTTTCTTTTAAACATAAGAATATATG CCGGTGTAGTACTTTAAGCGGCCCATTAGAGTTTTATGGTCGTCAAGTTGCTACAGCTGCAGGTTTTACTTTTGATGGACATGTCAGTAACTCTTCAGGAGGAGAGCTTCCAGATACAAG TTTGAGACAG ] [+] EMBL CD096338 [ AGCGGCCCATTAGAGTTTTATGGTCGTCAAGTTGCTACAGCTGCAGGTTTTACTTTTGATGGACATGTCAGTAACTCTTCAGGAGGAGAGCTTCCAGATACAAGTTTTGAGACAGAAAACGGACGTCAGAGTTTGGAAAAATTACGTGATGATGATTGTGAATTAATTCGTCGTTTAAATGTCACCTATATTTGTGATTTTATGT TGGAGTACAGAAAGAT AAAATGTTGGGTT CCAATTAGTTCATCAGAAAAGGTGGACCAACAAGGACGCTATAATGA TTTCCTAGTCATACCTCTCCCTTATCCTGGCAGCGAATTTTTCCGTATATGGCGTGATTCTGGTTATGCTATGCATCATGTATACTTTGACTGGAATCGGTCAGGAGTT GAAGTGTCTGTCAATCCAAGCCTTATACCAAAAACTCTGTTATCTAGCTCAGTAGAATGGAGCTTGTACAAGTCCTGGGATATTTATACAATCACTGTGAACTACATGAAGTTGCTTCTTGGCTTACTCTACGAAGGTGCTGGAGGTTTACTATTACATTGTGTTTCTGG ] [-] EMBL CD096487 [ GCGGCCCATTAGAGTTNTATGGTCGTCAAGTTGCTACAGCTGCAGGTTTTACTTTTGATGGACATGTCAGTAACTCTTCAGGAGGAGAGCTTCCAGATACAAGTTTTGAGACAGAAAACGGACGTCAGAGTTTGGAAAAATTACGTGATGATGATTGTGAATTAATTCGTCGTTTAAATGTCACCTATATTTGTGATTTTATGT TGGAGTACAGAAAGAT AAAATGTTGGGTT CCAATTAGTTCATCAGAAAAGGTGGACCAACAAGGACGCTATAATGA TTTCGTAGTCATACCTCTCCCTTATCCTGGCAGCGAATTTTTCCGTATATGGCGTGATTCTGGTTATGCTATGCATCATGTATACTTTGACTGGAATCGGTCAGGAGTT GAAGTGTCTGTCAATCCAAGCCTTATACCAAAAACTCTGTTATCTAGCTCAGTAGAATGGAGCTTGTACAAGTCCTGGGATATTTATACAATCACTGTGAACTACATGAAGTTGCTTCTTGGCTTACTCTACGAAGGTGCTGGAGGTTTACTATTACATTGTGTTTCTGGA ] [+] EMBL CD196887 [ ATTTGTGATTTTATGT TGGAGTACAGAAAGAT AAAATGTTGGGTT CCAATTAGTTCATCAGAAAAGGTGGACCAACAAGGACGCTATAATGA TTTCGTAGTCATACCTCTCCCTTATCCTGGCAGCGAATTTTTCCGTATATGGCGTGATTCTGGTTATGCTATGCATCATGTATACTTTGACTGGAATCGGTCAGGAGTT GAAGTGTCTGTCAATCCAAGCCTTATACCAAAAACTCTGTTATCTAGCTCAGTAGAATGGAGCTTGTACAAGTCCTGGGATATTTATACAATCACTGTGAACTACATGAAGTTGCTTCTTGGCTTACTCTACGAAGGTGCTGGAGGCTTACTATTACATTGTGTTTCTGGATGGGATCGTACACCGCTGTTTATTTGTCTACTTCGTTGTTTACTTTGGGCTGATGATTTAATGCATTGTA ] [+] EMBL CD095133 [ AAAGAT AAAATGTTGGGTT CCAATTAGTTCATCAGAAAAGGTGGACCAACAAGGACGCTATAATGA TTTCGTAGTCATACCTCTCCCTTATCCTGGCAGCGAATTTTTCCGTATATGGCGTGATTCTGGTTATGCTATGCATCATGTATACTTTGACTGGAATCGGTCAGGAGTT GAAGTGTCTGTCAATCCAAGCCTTATACCAAAAACTCTGTTATCTAGCTCAGTAGAATGGAGCTTGTACAAGTCCTGGGATATTTATACAATCACTATGAACTACATGAAGTTGCTTCTTGGCTTACTCTACGAAGATGCTGGAGGTTTACTATTACATTGTGTTTCTGGATGGGATCGTCCACCGCTGTTTATTTGTCTACTTCGTTGTTTACTTTGGGCTGATGATTTAATGCATTGTAGTTTAACACCTATTCAAATGTTATATCTTACTCTTGGATATGATTGGTT CTTGTTTGGTCATAAATTGAAAACACGTATGGAATTGGGTGAAGAAATACTCCGATTTACTTTTCAATTTATCGGTGAAATGGCTAAATGTACAGA ] [-] EMBL CD094456 [ AAGAT AAAATGTTGGGTT CCAATTAGTTCATCAGAAAAGGTGGACCAACAAGGACGCTATAATGA TTTCGTAGTCATACCTCTCCCTTATCCTGGCAGCGAATTTTTCCGTATATGGCGTGATTCTGGTTATGCTATGCATCATGTATACTTTGACTGGAATCGGTCAGGAGTT GAAGTGTCTGTCAATCCAAGCCTTATACCAAAAACTCTGTTATCTAGCTCAGTAGAATGGAGCTTGTACAAGTCCTGGGATATTTATACAATCACTGTGAACTACATGAAGTTGCTTCTTGGCTTACTCTACGAAGGTGCTGGAGGTTTACTATTACATTGTGTTTCTGGATGGGATCGTCCACCGCTGTTTATTTGTCTACTTCGTTGTTTACTTTGGGCTGATGATTTAATGCATTGTAGTTTAACACCTATTCAAATGTTATATCTTACTCTTGGATATGATTGGTT CTTGTTTGGTCATAAATTGAAAACACGTATGGAATTGGGTGAAGAAATACTCCGATTTACTTTTCAATTTATCGGTGAAATGGCTAAATGTACAGAA ] [-] EMBL CD060341 [ AAAGGTGGACCTACAAGTACGCTATAATGA TTTCGTAGTCATACCTCTCCCTTATCCTGGCAGCGAATTTTTCCGTATATGGCGTGATTCTGGTTATGCTATGCATCATGTATACTTTGACTGGAATCGGTCAGGAGTT GAAGTGTCTGTCAATCCTAGCCTTATACCTAAAACTCTGTTATCTAGCTCAGTAGTATGGAGCTTGTACAAGTCCTGGGATATTTATACAATCACTGTGAACTACATGAAGTTGCTTCTTGGCTTACTCTACGAAGGTGCTGGAGGTTTACTATTACATTGTGTTTCTGGATGGGATCGTACACCGCTGTTTATTTGTCTACTTCGTTGTTTACTTTGGGCTGATGATTTAATGCATTGTAGTTTTACACCTATTCAAATGTTATATCTTACTCTTGGATATGATTGGTTCCTGGTTTGCTCATATGTTGCATACACGTAT ] [+] EMBL CD079267 [ TGA TTTCGTAGTCATACCTCTCCCTTATCCTGGCAGCGAATTTTTCCGTATATGGCGTGATTCTGGTTATGCTATGCATCATGTATACTTTGACTGGAATCGGTCAGGAGTT GAAGTGTCTGTCAATCCAAGCCTTATACCAAAAACTCTGTTATCTAGCTCAGTAGAATGGAGCTTGTACAAGTCCTGGGATATTTATACAATCACTGTGAACTACATGAAGTTGCTTCTTGGCTTACTCTACGAAGGTGCTGGAGGTTTACTATTACATTGTGTTTCTGGATGGGATCGTACACCGCTGTTTATTTGTCTACTTCGTTGTTTACTTTGGGCTGATGATTTAATGCATTGTAGTTTAACACCTATTCAAATGTTATATCTTACTCTTGGATATGATTGGTT CTTGTTTGGTCATAAATTGAAAACACGTATGGAATTGGGTGAAGAAATACTCCGATTTACTTTTCAATTTATCGGTGAAATGGCTAAATGTACAGAATTATCACTTCGCAGAGTCTATGATATTCACGTTACCGATGGGTCTAAAAGTTCAGATTCGGATGATTCTTCGTTTATTGATTTACGTTCCAGTGATGATTTACAACCCTTAAGGCAATCACG ] [-] EMBL CD161345 [ TACATGAAGTTGCTTCTTGGCTTACTCTACGAAGGTGCTGGAGGTTTACTATTACATTGTGTTTCTGGATGGGATCGTACACCGCTGTTTATTTGTCTACTTCGTTGTTTACTTTGGGCTGATGATTTAATGCATTGTAGTTTAACACCTATTCAAATGTTATATCTTACCCTTGGATATGATTGGTT CTTGTTTGGTCATAAATTGAAAACACGTATGGAATTGGGTGAAGAAATACTCCGATTTACTTTTCAATTTATCGGTGAAATGGCTAAATGTACAGAATTATCACTTCGCAGAGTCTATGATATTCACGTTACCGATGGGTCTAAAAGTTCAGATTCGGATGATTCTTCGTTTATTGATTTACGTTCCAGT ] [+] EMBL CD068502 [ TGATGGGTT CTTG TGGTCATAAATTGAAAACACGTATGGAA TGGGTGAAGAAATACTCCGATTTACTTTTCAATTTATCGGTGAAATGGCTAAATGTACAGAATTATCACTTCGCAGAGTCTATGATATTCACGTTACCGATGGGTCTAAAAGTTCAGATTCGGATGATTCTTCGTTTATTGATTTACGTTCCAGTGATGATTTACAACCCTTAAGGCAATCACGATTGGAAGAACTATCAAATTTATTCTTTGAATTTTGGAATGAAGAAATTAAAAGACGTGAAGTTCAATCTACTATCAACAGTATGGGA ] [+] EMBL CD083896 [ CGTTTATTGATTTACG TCCAGTGATGATTTACAACCCTTAAGGCAATCACGATTGGAAGAACTATCAAATTTATTCTTTGAATTTTGGAATGAAGAAATTAAAAGACGTGAAGTTCAATCTACTATCAACAGTATTGGACCCATTACCAACGAATCTGTTGTTGTGGATAAAAATGCTCAGTTGATATCGAATTCTAAAGAAAAATCAACTTTTAACAATGATGATGAATCATCAACAGGTCATGAAAACTATGCATATAGAAATAGCAATAAACCCTCTGAAAATCAAAATTCCATTGTTTTTCAAATATCAAATGCTTTAAATTCAGCTGTATCAGTGGTTACCTCAAATTTTGTCACACCATTATTATCATCCTCATCGTCGTCATCAGTAGCAGCATCATCACCAGTATCATCTTCAAACTCAATCAGAACAGTAAATGAGGGTATCG ] [+] EMBL CD080172 [ TTAAAAGACGTGAAGTTCAATCTACTATCAACAGTATTGGACCCATTACCAACGAATCTGTTGTTGTGGATAAAAATGCTCAGTTGATATCGAATTCTAAAGAAAAATCAACTTTTAACAATGATGATGAATCATCAACAGGTCATGAAAACTATGCATATAGAAATAGCAATAAACCCTCTGAAAATCAAAATTCCATTGTTTTTCAAATATCAAATGCTTTAAATTCAGCTGTATCAGTGGTTACCTCAAATTTTGTCACACCATTATTATCATCCTCATCGTCGTCATCAGTAGCAGCATCATCACCAGTATCATCTTCAAACTCAATCAGAACAGTAAATGAGGGTATCGAAGATCCCCCTACTACCACATGAGTCACTATTCTTTCTTTGTTTGATTTTTCCATTGCAACATCTTATCTATGTATTTTGTTGTTATTTTATTCTTTTTTTATGATCAATATGTC GTAGTAGAATTAACAATACAATAAGTT ATTAAGCAAAAAAATGTCCGTTTATCTTTTTAATTTCTTCAAGATCATCAAATAAGTAACTCTATCAATTCTATATATTTAAATTGTAATATTTAATACATTATAACATTGATATAATGACTTGTCTTTTTTGTGTGTATCCTTTACCTTC AACAGTAATGATGAATATTGTTATTTGTTTGACCGACTGCTNTAGTTAATTCATTCCATTCAGTTTTTTTAATGAAGA TCCNACTATTAC TACATATAGAAAATTGGTTTCTGGTGAATT AAAATATATA ] [+] EMBL CD079167 [ ATTACCAACGAATCTGTTGTTGTGGATAAAAATGCTCAGTTGATATCGAATTCTAAAGAAAAATCAACTTTTAACAATGATGATGAATCATCAACAGGTCATGAAAACTATGCATATAGAAATAGCAATAAACCCTCTGAAAATCAAAATTCCATTGTTTTTCAAATATCAAATGCTTTAAATTCAGCTGTATCAGTGGTTACCTCAAATTTTGTCACACCATTATTATCATCCTCATCGTCGTCATCAGTAGCAGCATCATCACCAGTATCATCTTCAAACTCAATCAGAACAGTAAATGAGGGTATCGAAGATCCCCCTACTACCACATGAGTCACTATTCTTTCTTTGTTTGATTTTTCCATTGCAACATCTTATCTATGTATTTTGTTGTTATTTTATTCTTTTTTTATGATCAATATGTC GTAGTAGAATTAACAATACAATAAGTTGATTAAGC AAAAAATGTCCGTTTATCTTTTTAATTTCTTCAAGATCATCAAATAAGTAACTCTATCAATTCTATATATTTAAATTGTAATATTTAATACATTATAACATTGATATAATGACTTGTCTTTTTTGTGTGTATCCTTTACCTTC AACAGTAATGATGATAATTGTTATTTGTTTGACCGACTG ] [+] EMBL CD078493 [ GAATCATCAACAGGTCATGAAAACTATGCATATAGAAATAGCAATAAACCCTCTGAAAATCAAAATTCCATTGTTTTTCAAATATCAAATGCTTTAAATTCAGCTGTATCAGTGGTTACCTCAAATTTTGTCACACCATTATTATCATCCTCATCGTCGTCATCAGTAGCAGCATCATCACCAGTATCATCTTCAAACTCAATCAGAACAGTAAATGAGGGTATCGAAGATCCCCCTACTACCACATGAGTCACTATTCTTTCTTTGTTTGATTTTTCCATTGCAACATCTTATCTATGTATTTTGTTGTTATTTTATTCTTTTTTTATGATCAATATGTC GTAGTAGAATTAACAATACAATAAGTTGATTAAGCAAAAAAATGTCCGTTTATCTTTTTAATTTCTTCAAGATCATCAAATAAGTAACTCTATCAATTCTATATATTTAAATTGTAATATTTAATACATTATAACATTGATATAATGACTTGTCTTTTTTGTGTGTATCCTTTACCTTCAAACAGTAATGATGATAATTGTTATTTGTTTGACCGACTGCTTTAGTTAATTCATTCCATTCAGTTNTTTTAATGAAGATTCCCACTATTACTTACATAT ] [-] EMBL CD072965 [ AATTCAGCTGTATCAGTGGTTACCTCAAATTTTGTCACACCATTATTATCATCCTCATCGTCGTCATCAGTAGCAGCATCATCACCAGTATCATCTTCAAACTCAATCAGAACAGTAAATGAGGGTATCGAAGATCCCCCTACTACCACATGAGTCACTATTCTTTCTTTGTTTGATTTTTCCATTGCAACATCTTATCTATGTATTTTGTTGTTATTTTATTCTTTTTTTATGATCAATATGTC GTAGTAGAATTAACAATACAATAAGTTGATTAAGCAAAAAAATGTCCGTTTATCTTTTTAATTTCTTCAAGATCATCAAATAAGTAACTCTATCAATTCTATATATTTAAATTGTAATATTTAATACATTATAACATTGATATAATGACTTGTCTTTTTTGTGTGTATCCTTTACCTTCAAACAGTAATGATGATAATTGTTATTTGTTTGACCGACTGCTTTAGTTAATTCATTCCATTCAGTTTTTTTAATGAAGATTCCCACTATTACTTACATATAGAAAATTGTTTTCTGTTGAATTAAAAATATATAT] [+] EMBL AI739701 [ CATCCTCATCGTCGTCATCAGTAGCAGCATCATCACCAGTATCATCTTCAAACTCAATCAGAACAGTAAATGAGGGTATCGAAGATCCCCCTACTACCACATGAGTCACTATTCTTTCTTTGGTTGATTTTTCCATTGCAACATCTTATCTATGTATTTTGGTGGTAATTTATTCTTTTTTTATGATCAATATGTCGGTAGTAGGATTAACAATACAATAAGTTGATTAA ] consensusID : consensus_10754#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 463 fasta sequence [CGGCACGAGGGTCACCTATATTTGTGATTTTATGTTGGAGTACAGAAAGATAAAATGTTGGGTTCCAATTAGTTCATCAGAAAAGGTGGACCAACAAGGACGCTATAATGATTTCGTAGTCATACCTCTCCCTTATCCTGGCAGCGAATTTTTCCGTATATGGCGTGATTCTGGTTATGCTATGCATCATGTATACTTTGACTGGAATCGGTCAGGAGTTGAAGTGTCTGTCAATCCAAGCCTTATACCAAAAACTCTGTTATCTAGCTCAGTAGAATGGAGCTTGTACAAGTCCTGGGATATTTATACAATCACTGTGAACTACATGAAGTTGCTTCTTGGCTTACTCTACGAAGGTGCTGGAGGTTTACTATTACATTGTGTTTCTGGATGGGATCGTACACCGCTGTTTATTTGTCTACTTCGTTGTTTACTTTGGGCTGATGATTTAATGCCTTGTAGT] [+] EMBL CD083437 [CGGCACGAGGGTCACCTATATTTGTGATTTTATGTTGGAGTACAGAAAGATAAAATGTTGGGTTCCAATTAGTTCATCAGAAAAGGTGGACCAACAAGGACGCTATAATGATTTCGTAGTCATACCTCTCCCTTATCCTGGCAGCGAATTTTTCCGTATATGGCGTGATTCTGGTTATGCTATGCATCATGTATACTTTGACTGGAATCGGTCAGGAGTTGAAGTGTCTGTCAATCCAAGCCTTATACCAAAAACTCTGTTATCTAGCTCAGTAGAATGGAGCTTGTACAAGTCCTGGGATATTTATACAATCACTGTGAACTACATGAAGTTGCTTCTTGGCTTACTCTACGAAGGTGCTGGAGGTTTACTATTACATTGTGTTTCTGGATGGGATCGTACACCGCTGTTTATTTGTCTACTTCGTTGTTTACTTTGGGCTGATGATTTAATGCCTTGTAGT] consensusID : consensus_10754#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 277 fasta sequence [TTAAGTTGTATAAATTTGTCCTAGAGATTTTATACGAATGTTGGATGTTACGAAGGAAGATGTCGTCGAACTACTTAGTTTCATGCTGGACGCTGATTTTAACGAACAACTATTGAAGTGTTACCCAAAGGAAATATATAAAATAAACGATATCTGCAACACACTAACATTTGAGGACTGTCCTGCTGAAGTAAGCTGTCTAAAATTTTGTTCTTCGCTAAGATTTTGGAGAACATGAACGGTTATATGTGTGGACATTACCCACCACTCATTGCTA] [-] EMBL CD185938 [TTAAGTTGTATAAATTTGTCCTAGAGATTTTATACGAATGTTGGATGTTACGAAGGAAGATGTCGTCGAACTACTTAGTTTCATGCTGGACGCTGATTTTAACGAACAACTATTGAAGTGTTACCCAAAGGAAATATATAAAATAAACGATATCTGCAACACACTAACATTTGAGGACTGTCCTGCTGAAGTAAGCTGTCTAAAATTTTGTTCTTCGCTAAGATTTTGGAGAACATGAACGGTTATATGTGTGGACATTACCCACCACTC ] [+] EMBL CD063505 [ gttggccatGATTTCTCCGAACTACTTAGTTTCATGCTGGACGCTGATTTTAACGAACAACTATTGAAGTGTTACCCAAAGGAAATATATAAAATAAACGATATCTGCAACACACTAACATTTGAGGACTGTCCTGCTGAAGTAAGCTGTCTAAAATTTTGTTCTTCGCTAAGATTTTGGAGAACATGAACGGTTATATGTGTGGACATTACCCACCACTCATTGCTA] consensusID : consensus_10754#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 261 fasta sequence [CGCGGCCACGAATTCGGTCCGAGGTGTACAGGAATTATCACTTCGCAGAGTCTATGATATTCACGTTACCGATGGGTCTAAAAGTTCAGATTCGGATGATTCTTCGTTTATTGATTTACGTTCCAGTGATGATTTACAACCCTTAAGGCAATCACGATTGGAAGAACTATCAAATTTATTCTTTGAATTCTTGGATGAAGACATTAAAAGACGTGAAGTTCAATCTACTATCAACAGTATTGGACCCATTACCAACGAATC] [+] EMBL CD077612 [CGCGGCCACGAATTCGGTCCGAGGTGTACAGGAATTATCACTTCGCAGAGTCTATGATATTCACGTTACCGATGGGTCTAAAAGTTCAGATTCGGATGATTCTTCGTTTATTGATTTACGTTCCAGTGATGATTTACAACCCTTAAGGCAATCACGATTGGAAGAACTATCAAATTTATTCTTTGAATTCTTGGATGAAGACATTAAAAGACGTGAAGTTCAATCTACTATCAACAGTATTGGACCCATTACCAACGAATC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10754#0 AAGATGTCATCGAACTACTTAGTTTCATGCTGGACGCTGATTTTAACGAACAACTATTGA 60 consensus_10754#1 ------------------------------------------------------------ consensus_10754#3 ------------------------------------------------------------ consensus_10754#2 ------------------------------------------------------------ consensus_10754#0 AGTGTTACCCAAAGGAAATATATAAAATAAACGATATCTGCAACACACTAACATTTGAGG 120 consensus_10754#1 ------------------------------------------------------------ consensus_10754#3 ------------------------------------------------------------ consensus_10754#2 ------------------------------------------------------------ consensus_10754#0 ACTGTCCTGCTGAAATTTTGGAGAACATGAACGGTTATATGTGTGGACATTACCCACCAC 180 consensus_10754#1 ------------------------------------------------------------ consensus_10754#3 ------------------------------------------------------------ consensus_10754#2 ------------------------------------------------------------ consensus_10754#0 TCATTGCTATTCCCCGTACTCGACATTTATCTTCATCATTGGCCGATTTAGGTCAGCTTA 240 consensus_10754#1 ------------------------------------------------------------ consensus_10754#3 ------------------------------------------------------------ consensus_10754#2 ------------------------------------------------------------ consensus_10754#0 TGCTTCAGTCAAAGTTTGCTCGCTGCCGAACAAGATTTGTTGTCCCTTCCTTTTCTTTTA 300 consensus_10754#1 ------------------------------------------------------------ consensus_10754#3 ------------------------------------------------------------ consensus_10754#2 ------------------------------------------------------------ consensus_10754#0 AACATAAGAATATATGCCCGGTGTAGTACTTTAAGCGGCCCATTAGAGTTTTATGGTCGT 360 consensus_10754#1 ------------------------------------------------------------ consensus_10754#3 ------------------------------------------------------------ consensus_10754#2 ------------------------------------------------------------ consensus_10754#0 CAAGTTGCTACAGCTGCAGGTTTTACTTTTGATGGACATGTCAGTAACTCTTCAGGAGGA 420 consensus_10754#1 ------------------------------------------------------------ consensus_10754#3 ------------------------------------------------------------ consensus_10754#2 ------------------------------------------------------------ consensus_10754#0 GAGCTTCCAGATACAAGTTTTGAGACAGAAAACGGACGTCAGAGTTTGGAAAAATTACGT 480 consensus_10754#1 ------------------------------------------------------------ consensus_10754#3 ------------------------------------------------------------ consensus_10754#2 ------------------------------------------------------------ consensus_10754#0 GATGATGATTGTGAATTAATTCGTCGTTTAAATGTCACCTATATTTGTGATTTTATGTTG 540 consensus_10754#1 -----------------------CGGCACGAGGGTCACCTATATTTGTGATTTTATGTTG 37 consensus_10754#3 ------------------------------------------------------------ consensus_10754#2 ------------------------------------------------------------ consensus_10754#0 GAGTACAGAAAGATAAAATGTTGGGTTCCAATTAGTTCATCAGAAAAGGTGGACCAACAA 600 consensus_10754#1 GAGTACAGAAAGATAAAATGTTGGGTTCCAATTAGTTCATCAGAAAAGGTGGACCAACAA 97 consensus_10754#3 ------------------------------------------------------------ consensus_10754#2 ------------------------------------------------------------ consensus_10754#0 GGACGCTATAATGATTTCGTAGTCATACCTCTCCCTTATCCTGGCAGCGAATTTTTCCGT 660 consensus_10754#1 GGACGCTATAATGATTTCGTAGTCATACCTCTCCCTTATCCTGGCAGCGAATTTTTCCGT 157 consensus_10754#3 ---------------------------------------CGCGGCCACGAA---TTCGGT 18 consensus_10754#2 ---------------------------------------------------TTAAGTTGT 9 ** consensus_10754#0 ATATGGC-GTGATTCTGGTTAT-GCTATGCATCATGTATACTTTGACTGGAATCGGTCAG 718 consensus_10754#1 ATATGGC-GTGATTCTGGTTAT-GCTATGCATCATGTATACTTTGACTGGAATCGGTCAG 215 consensus_10754#3 CCGAGGT-GT-ACAGGAATTATCACTTCGCAGAGTCTATGATATTCACGTTACCGAT--- 73 consensus_10754#2 ATAAATTTGTCCTAGAGATTTT--ATACGAATGTTGGATGTTACGAAGGAAGATGTC--- 64 ** ** * * * * * ** * * * consensus_10754#0 GAGTTGAAGTGTCTGTCAATCCAAGCCTTATACCAAAAACTCTGTTATCTAGCTCAGTAG 778 consensus_10754#1 GAGTTGAAGTGTCTGTCAATCCAAGCCTTATACCAAAAACTCTGTTATCTAGCTCAGTAG 275 consensus_10754#3 GGGTCTAAAAGTTCA--GATTCGGA--TGATTCT------TCGTTTATTGATTTACGTTC 123 consensus_10754#2 --GTCGAACTACTTA--GTTTCATGCTGGACGCTGA------TTTTAACGAACAACTATT 114 ** ** * * * * *** * consensus_10754#0 AATGGAGCTTGTACAAGTCCTGGGATATTTATACAATCACTGTGAACTACATGAAGTTGC 838 consensus_10754#1 AATGGAGCTTGTACAAGTCCTGGGATATTTATACAATCACTGTGAACTACATGAAGTTGC 335 consensus_10754#3 CAGTGATGATTTACAACCCTTAAGGCAATCA--CGATTGG-AAGAACTAT-CAAATTTAT 179 consensus_10754#2 GAAGTGTTACCCAAAGGAAATATATAAAATAAACGATATCTGCAACACACTAACATTTGA 174 * * * * * * * ** * * * ** consensus_10754#0 TTCTTGGCTTACTCTACGAAGGTGCTGGAGGTTTACTATTACATTGTGTTTCTGGATGGG 898 consensus_10754#1 TTCTTGGCTTACTCTACGAAGGTGCTGGAGGTTTACTATTACATTGTGTTTCTGGATGGG 395 consensus_10754#3 TCTTTGAATTCTTGGATGAAGACATTAAAAGACGTGAAGTTCAATCTACTATCA-ACAGT 238 consensus_10754#2 GGACTGTCCTGCTGAAGTAAGCTGTCTAAAATTTTGTTCTTCGCTAAGATTTTGGAGAAC 234 ** * * * *** * * * * * * consensus_10754#0 ATCGTACACCGCTGTTTATTTGTCTACTTCGTTGTTTACTTTGGGCTGATGATTTAATGC 958 consensus_10754#1 ATCGTACACCGCTGTTTATTTGTCTACTTCGTTGTTTACTTTGGGCTGATGATTTAATGC 455 consensus_10754#3 ATTGGAC-CCATTACCAACGAATC------------------------------------ 261 consensus_10754#2 AT-GAACGGTTATATGTGTGGACATTACCCACCACTCATTGCTA---------------- 277 ** * ** * consensus_10754#0 ATTGTAGTTTAACACCTATTCAAATGTTATATCTTACTCTTGGATATGATTGGTTCTTGT 1018 consensus_10754#1 CTTGTAGT---------------------------------------------------- 463 consensus_10754#3 ------------------------------------------------------------ consensus_10754#2 ------------------------------------------------------------ consensus_10754#0 TTGGTCATAAATTGAAAACACGTATGGAATTGGGTGAAGAAATACTCCGATTTACTTTTC 1078 consensus_10754#1 ------------------------------------------------------------ consensus_10754#3 ------------------------------------------------------------ consensus_10754#2 ------------------------------------------------------------ consensus_10754#0 AATTTATCGGTGAAATGGCTAAATGTACAGAATTATCACTTCGCAGAGTCTATGATATTC 1138 consensus_10754#1 ------------------------------------------------------------ consensus_10754#3 ------------------------------------------------------------ consensus_10754#2 ------------------------------------------------------------ consensus_10754#0 ACGTTACCGATGGGTCTAAAAGTTCAGATTCGGATGATTCTTCGTTTATTGATTTACGTT 1198 consensus_10754#1 ------------------------------------------------------------ consensus_10754#3 ------------------------------------------------------------ consensus_10754#2 ------------------------------------------------------------ consensus_10754#0 CCAGTGATGATTTACAACCCTTAAGGCAATCACGATTGGAAGAACTATCAAATTTATTCT 1258 consensus_10754#1 ------------------------------------------------------------ consensus_10754#3 ------------------------------------------------------------ consensus_10754#2 ------------------------------------------------------------ consensus_10754#0 TTGAATTTTGGAATGAAGAAATTAAAAGACGTGAAGTTCAATCTACTATCAACAGTATTG 1318 consensus_10754#1 ------------------------------------------------------------ consensus_10754#3 ------------------------------------------------------------ consensus_10754#2 ------------------------------------------------------------ consensus_10754#0 GACCCATTACCAACGAATCTGTTGTTGTGGATAAAAATGCTCAGTTGATATCGAATTCTA 1378 consensus_10754#1 ------------------------------------------------------------ consensus_10754#3 ------------------------------------------------------------ consensus_10754#2 ------------------------------------------------------------ consensus_10754#0 AAGAAAAATCAACTTTTAACAATGATGATGAATCATCAACAGGTCATGAAAACTATGCAT 1438 consensus_10754#1 ------------------------------------------------------------ consensus_10754#3 ------------------------------------------------------------ consensus_10754#2 ------------------------------------------------------------ consensus_10754#0 ATAGAAATAGCAATAAACCCTCTGAAAATCAAAATTCCATTGTTTTTCAAATATCAAATG 1498 consensus_10754#1 ------------------------------------------------------------ consensus_10754#3 ------------------------------------------------------------ consensus_10754#2 ------------------------------------------------------------ consensus_10754#0 CTTTAAATTCAGCTGTATCAGTGGTTACCTCAAATTTTGTCACACCATTATTATCATCCT 1558 consensus_10754#1 ------------------------------------------------------------ consensus_10754#3 ------------------------------------------------------------ consensus_10754#2 ------------------------------------------------------------ consensus_10754#0 CATCGTCGTCATCAGTAGCAGCATCATCACCAGTATCATCTTCAAACTCAATCAGAACAG 1618 consensus_10754#1 ------------------------------------------------------------ consensus_10754#3 ------------------------------------------------------------ consensus_10754#2 ------------------------------------------------------------ consensus_10754#0 TAAATGAGGGTATCGAAGATCCCCCTACTACCACATGAGTCACTATTCTTTCTTTGTTTG 1678 consensus_10754#1 ------------------------------------------------------------ consensus_10754#3 ------------------------------------------------------------ consensus_10754#2 ------------------------------------------------------------ consensus_10754#0 ATTTTTCCATTGCAACATCTTATCTATGTATTTTGTTGTTATTTTATTCTTTTTTTATGA 1738 consensus_10754#1 ------------------------------------------------------------ consensus_10754#3 ------------------------------------------------------------ consensus_10754#2 ------------------------------------------------------------ consensus_10754#0 TCAATATGTCGTAGTAGAATTAACAATACAATAAGTTGATTAAGCAAAAAAATGTCCGTT 1798 consensus_10754#1 ------------------------------------------------------------ consensus_10754#3 ------------------------------------------------------------ consensus_10754#2 ------------------------------------------------------------ consensus_10754#0 TATCTTTTTAATTTCTTCAAGATCATCAAATAAGTAACTCTATCAATTCTATATATTTAA 1858 consensus_10754#1 ------------------------------------------------------------ consensus_10754#3 ------------------------------------------------------------ consensus_10754#2 ------------------------------------------------------------ consensus_10754#0 ATTGTAATATTTAATACATTATAACATTGATATAATGACTTGTCTTTTTTGTGTGTATCC 1918 consensus_10754#1 ------------------------------------------------------------ consensus_10754#3 ------------------------------------------------------------ consensus_10754#2 ------------------------------------------------------------ consensus_10754#0 TTTACCTTCAACAGTAATGATGATAATTGTTATTTGTTTGACCGACTGCTTTAGTTAATT 1978 consensus_10754#1 ------------------------------------------------------------ consensus_10754#3 ------------------------------------------------------------ consensus_10754#2 ------------------------------------------------------------ consensus_10754#0 CATTCCATTCAGTTTTTTTAATGAAGATCCCACTATTACTACATATAGAAAATTGGTTTC 2038 consensus_10754#1 ------------------------------------------------------------ consensus_10754#3 ------------------------------------------------------------ consensus_10754#2 ------------------------------------------------------------ consensus_10754#0 TGGTGAATTAAAATATATAT 2058 consensus_10754#1 -------------------- consensus_10754#3 -------------------- consensus_10754#2 -------------------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||