cluster # 10762

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Schistosoma mansoni
cluster # 10762 cluster # 10762 Sequences # 21 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10762#0 length = 1696 sequences # 20

consensus_10762#1 length = 250 sequences # 1

consensusID : consensus_10762#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 20
consensus length = 1696
fasta sequence

                              [TTATCTAGTCGATCGATAAATACAGCGCTTCTAACTCCTAGTACACATGTAGTGAAAATTGCTTCTGGACAAGACCATTTGGTTTGTCTGACAGATGAAGGTCGGCTCTATACTATGGGATGTGGTGAACAAGGTCAACTGGGTCGTGTTGCTGAACGGTTTGCTAAAGATGGTGGTCGTTCAGGGATTAGCTCACTACTTCAACCTACTGAATGTCGAGTTCGTGGAGCCGTCCGTTTTTCCGATGTGTGGGCAGGAGGTTTCGCTACATTCGCTCGTTGTCAAATGACTGGTGCCATCTATGCCTGTGGTCTAAATAATTATGGTCAGCTGGCATTACGCGATACAACCGGTCATGGAAAATCGCTTTCATGTAATTCTACGGAAGAGTTTGTTGACATCGAACTGGATATGGCTGAGAATGCTGAAAAGCTAGTAACTGATCGTCAGGAAGCTGACAGGTCAGAAGCCCAGCTGATCGCTCGACAGGGTCCCCTTATTCAGTTCATGTTAATTCGAGCC-TTGGATTTGATCCGGATCAAGATTGGCGTCAGTTTGCGATCGGTATGCATCACACACTGGCTTTAAACCATCTTGGTCACGTGTACGCTGTTGGTCGACCAGATTACGGTCGTCTTGGTTTGGGGTGTGATTTGAAGGGATCGAAAATTTCAGTGAACAAACCTACACGCGTGCTTGGTGCACTTAATGAGTGTGTCTGCTCATGGATCGGTTGTGGAGAAGTATGTTCATTTGCGGTTGATACTAAAGGTCGTGCTTATTCTTGGGGTATGGGTAGCAATCATCAACTTGGGCATGGAGATAGTGAAGATGACTGTTGGGAACCAGAGTTGATGGTAGGAAAACAGCTAGAAGATCGACGAGTTTTAATGATTGATGCTGGTGGTCAACATACTGTTATGCTTGCTTGCTCTGATACTCAGCCGAAAGTGATTGATACTGAGACAGATATTGTCATGGGTGATTCTAATCAGCTTCCAAATGGGATGAACAAATCTCCAGCAGCCGATAAACATGATGAGGAAATGTCAGAAATAATGTCTGGTCCACTTTCTAATAATAATATAGAGCAACATCAGCAAAGTGTGGAATTATCCAAGAATCTTAAGATGTGTGATTCTTCCGCTGATACATCAGTAGAGCGTATTTTGATTCCACCAATTGGACCTGGTGCCCCACAAAGCAAGCGAAACCGACGTGCAAGTCCTTCATCTGT-AACTGGAAGTACCGGGACGACGTTACTTACTCCCATTGGGTTTAGTTGTGAAAGTACAACAGGAAGTACAGCAGGGGCCACAATCAATAGCAGCGTTCATAGTTCTGCTGTTTCTGATACTTGCTCCGTTGGATCATGTGCGTCGACAAGTAGTACAAGCAGTCAGTTAAATAGTGCTAAAAGTACCGATGGTGGTGGAAGTAGCCGATGTAGTTCTTTTGATAATTACAGTGTACAGAGTAGCTTATTGTTAGTGCCATCCACAGAAGATAAATCCCGTAAAGGCACATGATATCCTGTTCTTATTTCCAGTATTTAAAAAAATCTACTTCGTATTGTTATTTACATTGATCCTTCTTAAGGTTATTTATAATACGTGGTATCACTTATATTTAGTCGTCATTTTTCAAACTGCTCAAATTTATTTTATCTCTAACCTTGTGGCTATACACATTCATC]

[+] EMBL CD160158             [TTATCTAGTCGATCGATAAATACAGCGCTTCTAACTCCTAGTACACATGTAGTGAAAATTGCTTCTGGACAAGACCATTTGGTTTGTCTGACAGATGAAGGTCGGCTCTATACTATGGGATGTGGTGAACAAGGTCAACTGGGTCGTGTTGCTGAACGGTTTGCTAAAGATGGTGGTCGTTCAGGGATTAGCTCACTACTTCAACCTACTGAATGTCGAGTTCGTGGAGCCGTCCGTTTTTCCGATGTGTGGGCAGGAGGTTTCGCTACATTCGCTCGTTGTCAAATGACTGGTGCCATCTATGCCTGTGGTCTAAATAATTATGGTCAGCTGGCATTACGCGATACAACCGGTCATGGAAAATCGCTTTCATGTAATTCTACGGAAGAGTTTGTTGACATCGAACTGGATATGGCTGAGAATGCTGAAAAGCTAGTAACTGATCGTCAGGAAGCTGACAGGTCAGAAGCCCAGCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD160247             [TTATCTAGTCGATCGATAAATACAGCGCTTCTAACTCCTAGTACACATGTAGTGAAAATTGCTTCTGGACAAGACCACTTGGTTTGTCTGACAGATGAAGGTCGGCTCTATACTATGGGATGTGGTGAACAAGGTCAACTGGGTCGTGTTGCTGAACGGTTTGCTAAAGATGGTGGTCGTTCAGGGATTAGCTCACTACTTCAACCTACTGAATGTCGAGTTCGTGGAGCCGTCCGTTTTTCCGATGTGTGGGCGGGAGGTTTCGCTACATTCGCTCGTTGTCAAATGACTGGTGCCATCTATGCCTGTGGTCTAAATAATTATGGTCAGCTGGCATTACGCGATACAACCGGTCATGGAAAATCGCTTTCATGTAATTCTACGGAAGAGTTTGTTGACATCGAACTGGATATGGCTGAGAATGCTGAAAAGCTAGTAACTGATCGTCAGGAAGCTGACAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD160185             [TTATCTAGTCGATCGATAAATACAGCGCTTCTAACTCCTAGTACACATGTAGTGAAAATTGCTTCTGGACAAGACCATTTGGTTTGTCTGACAGATGAAGGTCGGCTCTATACTATGGGATGTGGTGAACAAGGTCAACTGGGTCGTGTTGCTGAACGGTTTGCTAAAGATGGTGGTCGTTCAGGGATTAGCTCACTACTTCAACCTACTGAATGTCGAGTTCGTGGAGCCGTCCGTTTTTCCGATGTGTGGGCAGGAGGTTTCGCTACATTCGCTCGTTGTCAAATGACTGGTGCCATCTATGCCTGTGGTCTAAATAATTATGGTCAGCTGGCATTACGCGATACAACCGGTCATGGAAAATCGCTTTCATGTAATTCTACGGAAGAGTTTGTTGACATCGAACTGGATATGGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD127315             [                                                                                                                                                                                                                                                                                                             ATGCCTGAGGGCCAAATAATGATGGCCAGGTGGCATTACGCGATACAACCGGTCATGGAAAATCGCTTTCATGTAATTCTACGGAAGAGTTTGTTGACATCGAACTGGATATGGCTGAGAATGCTGAAAAGCTAGTAACTGATCGTCAGGAAGCTGACAGGTCAGAAGCCCAGCTGATCGCTCGACAGGGTCCCCTTATTCAGTTCATGTTAATTCGAGCCTTTGGATTTGATCCGGATCAAGATTGGCGTCAGTTTGCGATCGGTATGCATCACACACTGGCTTTAAACCATCTTGGTCACGTGTACGCTGTTGGTCGACCAGATTACCGTCGTCTTGTTTTGGGGTGTGATTTGAAAGGATCGAAAATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD154983             [                                                                                                                                                                                                                                                                                                                                                                                                        TGTTGACATCGAACTGGATATGGCTGAGAATGCTGAAAAGCTAGTAACTGATCGTCAGGAAGCTGACAGGTCAGAAGCCCAGCTGATCGCTCGACAGGGTCCCCTTATTCAGTTCATGTTAATTCGAGCC TTGGATTTGATCCGGATCAAGATTGGCGTCAGTTTGCGATCGGTATGCATCACACACTGGCTTTAAACCATCTTGGTCACGTGTACGCTGTTGGTCGACCAGATTACGGTCGTCTTGGTTTGGGGTGTGATTTGAAGGGATCGAAAATTTCAGTGAACAAACCTACACGCGTGCTTGGTGCACTTAATGAGTGTGTCTGCTCATGGATCGGTTGTGGAGAAGTATGTTCATTTGCGGTTGATACTAAAGGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD132350             [                                                                                                                                                                                                                                                                                                                                                                                                                    ACTGGATATGGCTGAGAATGCTGAAAAGCTAGTAACTGATCGTCAGGAAGCTGACAGGTCAGAAGCCCAGCTGATCGCTCGACAGGGTCCCCTTATTCAGTTCATGTTAATTCGAGCCTTTGGATTTGATCCGGATCAAGATTGGCGTCAGTTTGCGATCGGTATGCATCACACACTGGCTTTAAACCATCTTGGTCACGTGTACGCTGTTGGTCGACCAGATTACGGTCGTCTTGGTTTGGGGTGTGATTTGAAGGGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD132143             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GTGTACGCTGTTGGTCGACCAGATTACGGTCGTCTTGGTTTGGGGTGTGATTTGAAGGGATCGAAAATTTCAGTGAACAAACCTACACGCGTGCTTGGTGCACTTAATGAGTGTGTCTGCTCATGGATCGGTTGTGGAGAAGTATGTTCATTTGCGGTTGATACT AAGGTCGTGCTTATTCTTGGGGTATGGGTAGCAATCATCAACTTGGGCATGGAGATAGTGAAGATGACTGTTGGGAACCAGAGTTGATGGTAGGAAAACAGCTAGAAGATCGACGAGTTTTAATGATTGATGCTGGTGGTCAACATACTGTTATGCTTGCTTGCTCTGATACTCAGCCGAAAGTGATTGATACTGAGACAGATATTGTCATGGGTGATTCTAATCAGCTTCCAAATGGGATGAACAAATCTCCAGCAGCCGATAAACATGATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD152998             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ATTACGGTCGTCTTGGTTTGGGGTGTGATTTGAAGGGATCGAAAATTTCAGTGAACAAACCTACACGCGTGCTTGGTGCACTTAATGAGTGTGTCTGCTCATGGATCGGTTGTGGAGAAGTATGTTCATTTGCGGTTGATACTAAAGGTCGTGCTTATTCTTGGGGTATGGGTAGCAATCATCAACTTGGGCATGGAGATAGTGAAGATGACTGTTGGGAACCAGAGTTGATGGTAGGAAAACAGCTAGAAGATCGACGAGTTTTAATGATTGATGCTGGTGGTCAACATACTGTTATGCTTGCTTGCTCTGATACTCAGCCGAAAGTGATTGATACTGAGACAGATATTGTCATGGGTGATTCTAATCAGCTTCCAAATGGGATGAACAAATCTCCAGCAGCCGATAAACATGATGAGGAAATGTCAGAAATAATGTCTGGTCCACTTTCTAATAATAATATAGAGCAACATCAGCAAAGTGTGGAATTATCCCAGAATCTTAAGATGTGTGATTCTTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD181015             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ATTTCAGTGAACAAACCTACACGCGTGCTTGGTGCACTTAATGAGTGTGTCTGCTCATGGATCGGTTGTGGAGAAGTATGTTCATTTGCGGTTGATACTAAAGGTCGTGCTTATTCTTGGGGTATGGGTAGCAATCATCAACTTGGGCATGGAGATAGTGAAGATGACTGTTGGGAACCAGAGTTGATGGTAGGAAAACAGCTAGAAGATCGACGAGTTTTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CD124948             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GAAGTATGTTCATTTGCGGTTGATACTAAAGGTCGTGCTTATTCTTGGGGTATGGGTAGCAATCATCAACTTGGGCATGGAGATAGTGAAGATGACTGTTGGGAACCAGAGTTGATGGTAGGAAAACAGCTAGAAGATCGACGAGTTTTAATGATTGATGCTGGTGGTCAACATACTGTTATGCTTGCTTGCTCTGATACTCAGCCGAAAGTGATTGATACTGAGACAGATATTGTCATGGGTGATTCTAATCAGCTTCCAAATGGGATGATCAAATCTCCAGCAGCCGATAAACATGATGAGGAAATGTCAGAAATAATGTCTGGTCCACTTTCTAATAATAATATAGAGCAACATCAGCAAAGTGTGGAATTATCCAAGAATCTTAAGATGTGTGATTCTTCCGCTGATACATCAGTAGAGCGTATTTTGATTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD178225             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GCAATCATCAACTTGGGCATGGAGATAGTGAAGATGACTGTTGGGAACCAGAGTTGATGGTAGGAAAACAGCTAGAAGATCGACGAGTTTTAATGATTGATGCTGGTGGTCAACATACTGTTATGCTTGCTTGCTCTGATACTCAGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD063090             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CTCCAGCAGCCGATAAGCATGATGAGGAAATGTCAGAAATAATGTCTGGTCCACTTTCTAATAATAATATAGAGCAACATCAGCAAAGTGTGGAATTATCCAAGAATCTTAAGATGTGTGATTCTTCCGCTGATACATCAGTAGAGCGTATTTTGATTCCACCAATTGGACCTGGTGCCCCACAAAGCAAGCGAAACCGACGTGCAAGTCCTTCATCTGT AACTGGAAGTACCGGGACGACGTTACTTACTCCCATTGGGTTTAGTTGTGAAAGTACAACAGGAAGTACAGCAGGGGCCACAATCAATAGCAGCGTTCATAGTTCTGCTGTTTCTGATACTTGCTCCGTTGGATCATGTGCGTCGACAAGTAGTACAAGCAGTCAGTTAAATAGTGCTAAAAGTACCGATGGTGGT                                                                                                                                                                                                                                                                       ]
[+] EMBL CD139756             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TGATGAGGAAATGTCAGAAATAGTGTCTGGCCCACTTTCTAATAGTATTATGGAGCAACTTCTGCAAAGTGAGGAATTATCCAAGAATCTTAAGATGTGTGATTCTTCCGCTGATACATCAGTAGAGCGTATTTTGATTCCACCTATTGGACCTGGTGCCCCACAAAGCAAGCGAAACCGACGTGCAAGTCCTTCATCTGTAAACTGG AGTACCGGGACGACGTTACTTACTCCCATTGGGTTTAGTTGT                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD124673             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ACAAAGCAAGCGAAACCGACGTGCAAGTCCTTCATCTGT AACTGGAAGTACCGGGACGACGTTACTTACTCCCATTGGGTTTAGTTGTGAAAGTACAACAGGAAGTACAGCAGGGGCCACAATCAATAGCAGCGTTCATAGTTCTGCTGTTTCTGATACTTGCTCCGTTGGATCATGTGCGTCGACAAGT                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD164407             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      cgtgggcACCGACGTGCAAGTCCTTCATCTGT AACTGGAAGTACCGGGACGACGTTACTTACTCCCATTGGGTTTAGTTGTGAAAGTACAACAGGAAGTACAGCAGGGGCCACAATCAATAGCAGCGTTCATAGTTCTGCTGTTTCTGATACTTGCTCCGTTGGATCATGTGCGTCGACAAGTAGTACAAGCAGTCAGTTAAATAGTGCTAAAAGTACCGATGGTGGTGGAAGTAGCCGATGTAGTTCTTTTGATAATTACAGTGTACAGAGTAG                                                                                                                                                                                                                        ]
[+] EMBL CD180306             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CTTACTCCCATTGGGTTTAGTTGTGAAAGTACAACAGGAAGTACAGCAGGGGCCACAATCAATAGCAGCGTTCATAGTTCTGCTGTTTCTGATACTTGCTCCGTTGGATCATGTGCGTCGACAAGTAGTACAAGCAGTCAGTTAAATAGTGCTAAAAGTACCGATGGTGGTGGAAGTAGCCGATGTAGTTCTTTTGATAATTACAGTGTACAGAGTAGCTTATTGTTAGTGCCATCCACAGAAGATAAATCCCGTAAAGGCACATGATATCCTGTTCTTATTTCCAGTATTTAAAAAAATCTACTTCGTATTGTTATTTACATTGATCCTTCTTAAGGTTATTTATAATACGTGGTATCACTTATATTTAGTCGTCATTTTTCAAACTGCTCAAATTTATTTTATCTCTAACCTTGTGGCTA            ]
[+] EMBL CD123785             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CTCCCATTGGGTTTAGTTGTGAAAGTACAACAGGAAGTACAGCAGGGGCCACAATCAATAGCAGCGTTCATAGTTCTGCTGTTTCTGATACTTGCTCCGTTGGATCATGTGCGTCGACAAGTAGTACAAGCAGTCAGTTAAATAGTGCTAAAAGTACCGATGGTGGTGGAAGTAGCCGATGTAGTTCTTTTGATAATTACAGTGTACAGAGTAGCTTATTGTTAGTGCCATCCACAGAAGATAAATCCCGTAAAGGCACATGATATCCTGTTCTTATTTCCAGTATTTAAAAAAATCTACTTCGTATTGTTATTTACATTGATCCTTCTTAAGGTTATTTATAATACGTGGTATCACTTATATTTAGTCGTCATTTTTCAAACTGCTCAAATTTATTTTATCTCTAACCTTGTGGCTA            ]
[+] EMBL CD180418             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ATTGGGTTTAGTTGTGAAAGTACAACAGGAAGTACAGCAGGGGCCACAATCAATAGCAGCGTTCATAGTTCTGCTGTTTCTGATACTTGCTCCGTTGGATCATGTGCGTCGACAAGTAGTACAAGCAGTCAGTTAAATAGTGCTAAAAGTACCGATGGTGGTGGAAGTAGCCGATGTAGTTC TTTGATAATTACAGTGTACAGAGTAGCTTATTGTTAGTGCCATCCACAGAAGATAAATCCCGTAAAGGCACATGATATCCTGTTCTTATTTCCAGTATTTAAAAAAATCTACTTCGTATTGTTATTTACATAGATCCTTCTTAAGGTTATTTATAATACGTGGTATCACTTATATTTAGTCGTCATTTTTCAAACTGCTCAAATTT                                    ]
[-] EMBL CD180361             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TTGGGTTTAGTTGTGAAAGTACAACAGGAAGTACAGCAGGGGCCACAATCAATAGCAGCGTTCATAGTTCTGCTGTTTCTGATACTTGCTCCGTTGGATCATGTGCGTCGACAAGTAGTACAAGCAGTCAGTTAAATAGTGCTAAAAGTACCGATGGTGGTGGAAGTAGCCGATGTAGTTCTTTTGATAATTACAGTGTACAGAGTAGCTTATTGTTAGTGCCATCCACAGAAGATAAATCCCGTAAAGGCACATGATATCCTGTTCTTATTTCCAGTATTTAAAAAAATCTACTTCGTACTGTTATTTACATTGATCCTTCTTAAGGTTATTTATAATACGTGGTATCACTTATATTTAGTCGTCATTTTTCAAACTGCTCAAATTTATTTTATCTCTAACCTTGTGGCTAT           ]
[-] EMBL CD180434             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GGCCACAATCAATAGCAGCGTTCATAGTTCTGCTGTTTCTGATACTTGCTCCGTTGGATCATGTGCGTCGACAAGTAGTACAAGCAGTCAGTTAAATAGTGCTAAAAGTACCGATGGTGGTGGAAGTAGCCGATGTAGTTCTTTTGATAATTACAGTGTACAGAGTAGCTTAGTGTTAGTGCCATCCACAGAAGATAAATCCCGTAAAGGCACATGATATCCTGTTCTTATTTCCAGTATTTAAAAAAATCTACTTCGTATTGTTATTTACATTGATCCTTCTTAAGGTTATTTATAATACGTGGTATCACTTATATTTAGTCGTCATTTTTCAAACTGCTCAAATTTATTTANTCTCTAACCTTGTGGCTATACACATTCATC]




>consensus_10762#0
TTATCTAGTCGATCGATAAATACAGCGCTTCTAACTCCTAGTACACATGTAGTGAAAATT
GCTTCTGGACAAGACCATTTGGTTTGTCTGACAGATGAAGGTCGGCTCTATACTATGGGA
TGTGGTGAACAAGGTCAACTGGGTCGTGTTGCTGAACGGTTTGCTAAAGATGGTGGTCGT
TCAGGGATTAGCTCACTACTTCAACCTACTGAATGTCGAGTTCGTGGAGCCGTCCGTTTT
TCCGATGTGTGGGCAGGAGGTTTCGCTACATTCGCTCGTTGTCAAATGACTGGTGCCATC
TATGCCTGTGGTCTAAATAATTATGGTCAGCTGGCATTACGCGATACAACCGGTCATGGA
AAATCGCTTTCATGTAATTCTACGGAAGAGTTTGTTGACATCGAACTGGATATGGCTGAG
AATGCTGAAAAGCTAGTAACTGATCGTCAGGAAGCTGACAGGTCAGAAGCCCAGCTGATC
GCTCGACAGGGTCCCCTTATTCAGTTCATGTTAATTCGAGCCTTGGATTTGATCCGGATC
AAGATTGGCGTCAGTTTGCGATCGGTATGCATCACACACTGGCTTTAAACCATCTTGGTC
ACGTGTACGCTGTTGGTCGACCAGATTACGGTCGTCTTGGTTTGGGGTGTGATTTGAAGG
GATCGAAAATTTCAGTGAACAAACCTACACGCGTGCTTGGTGCACTTAATGAGTGTGTCT
GCTCATGGATCGGTTGTGGAGAAGTATGTTCATTTGCGGTTGATACTAAAGGTCGTGCTT
ATTCTTGGGGTATGGGTAGCAATCATCAACTTGGGCATGGAGATAGTGAAGATGACTGTT
GGGAACCAGAGTTGATGGTAGGAAAACAGCTAGAAGATCGACGAGTTTTAATGATTGATG
CTGGTGGTCAACATACTGTTATGCTTGCTTGCTCTGATACTCAGCCGAAAGTGATTGATA
CTGAGACAGATATTGTCATGGGTGATTCTAATCAGCTTCCAAATGGGATGAACAAATCTC
CAGCAGCCGATAAACATGATGAGGAAATGTCAGAAATAATGTCTGGTCCACTTTCTAATA
ATAATATAGAGCAACATCAGCAAAGTGTGGAATTATCCAAGAATCTTAAGATGTGTGATT
CTTCCGCTGATACATCAGTAGAGCGTATTTTGATTCCACCAATTGGACCTGGTGCCCCAC
AAAGCAAGCGAAACCGACGTGCAAGTCCTTCATCTGTAACTGGAAGTACCGGGACGACGT
TACTTACTCCCATTGGGTTTAGTTGTGAAAGTACAACAGGAAGTACAGCAGGGGCCACAA
TCAATAGCAGCGTTCATAGTTCTGCTGTTTCTGATACTTGCTCCGTTGGATCATGTGCGT
CGACAAGTAGTACAAGCAGTCAGTTAAATAGTGCTAAAAGTACCGATGGTGGTGGAAGTA
GCCGATGTAGTTCTTTTGATAATTACAGTGTACAGAGTAGCTTATTGTTAGTGCCATCCA
CAGAAGATAAATCCCGTAAAGGCACATGATATCCTGTTCTTATTTCCAGTATTTAAAAAA
ATCTACTTCGTATTGTTATTTACATTGATCCTTCTTAAGGTTATTTATAATACGTGGTAT
CACTTATATTTAGTCGTCATTTTTCAAACTGCTCAAATTTATTTTATCTCTAACCTTGTG
GCTATACACATTCATC

consensusID : consensus_10762#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 250
fasta sequence

                              [GCGTGAATTTACATAGAAGATCGACGAGTTTTAATGATTGATGCTGGTGGTCAACATACTGTTATGCTTGCTTGCTCTGATACTCAGCCGAAAGTGATTGATACTGAGACAGATATTGTCATGGGTGATTCTAATCAGCTTCCAAATGGGATGAACAAATCTCCAGCAGCCGATAAACATGATGAGGAAATGTCAGAAATAATGTCTGGTCCACTTTCTAATAATAATATAGAGCAACATCAGCTAAGTG]

[+] EMBL CD160469             [GCGTGAATTTACATAGAAGATCGACGAGTTTTAATGATTGATGCTGGTGGTCAACATACTGTTATGCTTGCTTGCTCTGATACTCAGCCGAAAGTGATTGATACTGAGACAGATATTGTCATGGGTGATTCTAATCAGCTTCCAAATGGGATGAACAAATCTCCAGCAGCCGATAAACATGATGAGGAAATGTCAGAAATAATGTCTGGTCCACTTTCTAATAATAATATAGAGCAACATCAGCTAAGTG]




>consensus_10762#1
GCGTGAATTTACATAGAAGATCGACGAGTTTTAATGATTGATGCTGGTGGTCAACATACT
GTTATGCTTGCTTGCTCTGATACTCAGCCGAAAGTGATTGATACTGAGACAGATATTGTC
ATGGGTGATTCTAATCAGCTTCCAAATGGGATGAACAAATCTCCAGCAGCCGATAAACAT
GATGAGGAAATGTCAGAAATAATGTCTGGTCCACTTTCTAATAATAATATAGAGCAACAT
CAGCTAAGTG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10762#0      TTATCTAGTCGATCGATAAATACAGCGCTTCTAACTCCTAGTACACATGTAGTGAAAATT 60
consensus_10762#1      ------------------------------------------------------------
                                                                                   

consensus_10762#0      GCTTCTGGACAAGACCATTTGGTTTGTCTGACAGATGAAGGTCGGCTCTATACTATGGGA 120
consensus_10762#1      ------------------------------------------------------------
                                                                                   

consensus_10762#0      TGTGGTGAACAAGGTCAACTGGGTCGTGTTGCTGAACGGTTTGCTAAAGATGGTGGTCGT 180
consensus_10762#1      ------------------------------------------------------------
                                                                                   

consensus_10762#0      TCAGGGATTAGCTCACTACTTCAACCTACTGAATGTCGAGTTCGTGGAGCCGTCCGTTTT 240
consensus_10762#1      ------------------------------------------------------------
                                                                                   

consensus_10762#0      TCCGATGTGTGGGCAGGAGGTTTCGCTACATTCGCTCGTTGTCAAATGACTGGTGCCATC 300
consensus_10762#1      ------------------------------------------------------------
                                                                                   

consensus_10762#0      TATGCCTGTGGTCTAAATAATTATGGTCAGCTGGCATTACGCGATACAACCGGTCATGGA 360
consensus_10762#1      ------------------------------------------------------------
                                                                                   

consensus_10762#0      AAATCGCTTTCATGTAATTCTACGGAAGAGTTTGTTGACATCGAACTGGATATGGCTGAG 420
consensus_10762#1      ------------------------------------------------------------
                                                                                   

consensus_10762#0      AATGCTGAAAAGCTAGTAACTGATCGTCAGGAAGCTGACAGGTCAGAAGCCCAGCTGATC 480
consensus_10762#1      ------------------------------------------------------------
                                                                                   

consensus_10762#0      GCTCGACAGGGTCCCCTTATTCAGTTCATGTTAATTCGAGCCTTGGATTTGATCCGGATC 540
consensus_10762#1      ------------------------------------------------------------
                                                                                   

consensus_10762#0      AAGATTGGCGTCAGTTTGCGATCGGTATGCATCACACACTGGCTTTAAACCATCTTGGTC 600
consensus_10762#1      ------------------------------------------------------------
                                                                                   

consensus_10762#0      ACGTGTACGCTGTTGGTCGACCAGATTACGGTCGTCTTGGTTTGGGGTGTGATTTGAAGG 660
consensus_10762#1      ------------------------------------------------------------
                                                                                   

consensus_10762#0      GATCGAAAATTTCAGTGAACAAACCTACACGCGTGCTTGGTGCACTTAATGAGTGTGTCT 720
consensus_10762#1      ------------------------------------------------------------
                                                                                   

consensus_10762#0      GCTCATGGATCGGTTGTGGAGAAGTATGTTCATTTGCGGTTGATACTAAAGGTCGTGCTT 780
consensus_10762#1      ------------------------------------------------------------
                                                                                   

consensus_10762#0      ATTCTTGGGGTATGGGTAGCAATCATCAACTTGGGCATGGAGATAGTGAAGATGACTGTT 840
consensus_10762#1      ------------------------------------------------------------
                                                                                   

consensus_10762#0      GGGAACCAGAGTTGATGGTAGGAAAACAGCTAGAAGATCGACGAGTTTTAATGATTGATG 900
consensus_10762#1      -----------------GCGTGAATTTACATAGAAGATCGACGAGTTTTAATGATTGATG 43
                                        *   ***   *  ******************************

consensus_10762#0      CTGGTGGTCAACATACTGTTATGCTTGCTTGCTCTGATACTCAGCCGAAAGTGATTGATA 960
consensus_10762#1      CTGGTGGTCAACATACTGTTATGCTTGCTTGCTCTGATACTCAGCCGAAAGTGATTGATA 103
                       ************************************************************

consensus_10762#0      CTGAGACAGATATTGTCATGGGTGATTCTAATCAGCTTCCAAATGGGATGAACAAATCTC 1020
consensus_10762#1      CTGAGACAGATATTGTCATGGGTGATTCTAATCAGCTTCCAAATGGGATGAACAAATCTC 163
                       ************************************************************

consensus_10762#0      CAGCAGCCGATAAACATGATGAGGAAATGTCAGAAATAATGTCTGGTCCACTTTCTAATA 1080
consensus_10762#1      CAGCAGCCGATAAACATGATGAGGAAATGTCAGAAATAATGTCTGGTCCACTTTCTAATA 223
                       ************************************************************

consensus_10762#0      ATAATATAGAGCAACATCAGCAAAGTGTGGAATTATCCAAGAATCTTAAGATGTGTGATT 1140
consensus_10762#1      ATAATATAGAGCAACATCAGCTAAGTG--------------------------------- 250
                       ********************* *****                                 

consensus_10762#0      CTTCCGCTGATACATCAGTAGAGCGTATTTTGATTCCACCAATTGGACCTGGTGCCCCAC 1200
consensus_10762#1      ------------------------------------------------------------
                                                                                   

consensus_10762#0      AAAGCAAGCGAAACCGACGTGCAAGTCCTTCATCTGTAACTGGAAGTACCGGGACGACGT 1260
consensus_10762#1      ------------------------------------------------------------
                                                                                   

consensus_10762#0      TACTTACTCCCATTGGGTTTAGTTGTGAAAGTACAACAGGAAGTACAGCAGGGGCCACAA 1320
consensus_10762#1      ------------------------------------------------------------
                                                                                   

consensus_10762#0      TCAATAGCAGCGTTCATAGTTCTGCTGTTTCTGATACTTGCTCCGTTGGATCATGTGCGT 1380
consensus_10762#1      ------------------------------------------------------------
                                                                                   

consensus_10762#0      CGACAAGTAGTACAAGCAGTCAGTTAAATAGTGCTAAAAGTACCGATGGTGGTGGAAGTA 1440
consensus_10762#1      ------------------------------------------------------------
                                                                                   

consensus_10762#0      GCCGATGTAGTTCTTTTGATAATTACAGTGTACAGAGTAGCTTATTGTTAGTGCCATCCA 1500
consensus_10762#1      ------------------------------------------------------------
                                                                                   

consensus_10762#0      CAGAAGATAAATCCCGTAAAGGCACATGATATCCTGTTCTTATTTCCAGTATTTAAAAAA 1560
consensus_10762#1      ------------------------------------------------------------
                                                                                   

consensus_10762#0      ATCTACTTCGTATTGTTATTTACATTGATCCTTCTTAAGGTTATTTATAATACGTGGTAT 1620
consensus_10762#1      ------------------------------------------------------------
                                                                                   

consensus_10762#0      CACTTATATTTAGTCGTCATTTTTCAAACTGCTCAAATTTATTTTATCTCTAACCTTGTG 1680
consensus_10762#1      ------------------------------------------------------------
                                                                                   

consensus_10762#0      GCTATACACATTCATC 1696
consensus_10762#1      ----------------