cluster # 10772

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Schistosoma mansoni
cluster # 10772 cluster # 10772 Sequences # 21 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10772#0 length = 1346 sequences # 18
consensus_10772#1 length = 381 sequences # 1

consensus_10772#2 length = 330 sequences # 1
consensus_10772#3 length = 269 sequences # 1

consensusID : consensus_10772#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 18
consensus length = 1346
fasta sequence

                              [TTTTAATCATCAAGAAAATGTAAAACTAATGAACAA-TTTTGTGAAAAACAAAATCATAATCA-TTTAGACAAGAGTGTTTTGAACGTTATATATGAAAGAGGAAAACAAAAGGAGATAAATATAAATATATAAAATGTACAGTTATGAAGTTAAATTAGAAGCATTTACGATGTACAATAGCTGGACCCGATTCATCATATTCTTGTTTGGTTATCCACATCTGATTGAATGTCGACAATGAAGCTAATATAGAACCACCAATCCATACAGAATATTTACGTTCAGGTGGTGCTACAATTTTAATTTTCATTGTTGTTGGAGCAAGATTACAAATTTCTTTTTGCATACGATCTGAAATACCAGGGAACATAGTAGAACCACCAGATAGAACAATATTTGAATAAAGATCTTTACGAATATCAACATCACATTTCATAATTGAACTGTAAGTTGTTTCATGAATACCGGAACATTCCATACCTAAGAAACTTGGTTGTAACATTGCTTCAGGACATCGGAAACGTTCATTACCAATTGTAATCACTTGACCATCAGGTAATTCATAGCTTTTCTCAAGAGATGAACTATGTGAAGCAGTACTCATTTCTTGATCGAAGTCCAAAGCAACATAACACAGTTTTTCCTTGATGTCA-CGAACAATTTCACGTTCAGCAGTAGTTGTAAAAGAATGACCACGTTCAGTTAATATTTTCATAAGATAATCAGTTAAATCACGACCAGCCAAATCAAGACGAAGAATTGCATGTGGTAAAGCATAACCTTCATAAATAGGAACAGTATGACTTACACCATCTCCTGAATCCAATACTATACCCGTAGTACGACCAGATGCATACAAAGATAAAACTGCCTGAATAGCAACATACATGGCTGGACTGTTGAATGTTTCAAACATGATCTGTG--TCATTTTTTCACGATTTGCCTTAGGATTCATTGGTGCTTCAGTAAGTAGGACAGGGTGTTCTTCTGGGGCTACACGTAATTCATTATAAAATGTATGATGCCATATCTTCTCCATATCATCCCAATTAGAAACAATTCCATGTTCAATAGGATATTTTAAAGTTAGAATGCCTCTTTTCGATTGTGCCTCATCACCAACATAACTATCTTTTTGTCCCATACCAACCATAACACCTTGATGTCTTGGACGACCAACAATTGATGGGAATACAGCTCTTGGTGCATCATCACCAGCGAATCCAGCTTTACACATACCCGATCCATTATCAATGACAAGGGCACTTATTTCTTCTTCTGCCATTTGAGTAAAGCAACCTCAGAGGATTAGTTTTTCTTTAAAACTGAAGGATGTTCTGATGAGT]

[+] EMBL CD074873             [TTTTAATCATCAAGAAAATGTAAAACTAATGAACAA TTTTGTGAAAAACAAAATCATAATCA TTTAGACAAGAGTGTTTTGAACGTTATATATGAAAGAGGAAAACAAAAGGAGATAAATATAAATATATAAAATGTACAGTTATGAAGTTAAATTAGAAGCATTTACGATGTACAATAGCTGGACCCGATTCATCATATTCTTGTTTGGTTATCCACATCTGATTGAATGTCGACAATGAAGCTAATATAGAACCACCAATCCATACAGAATATTTACGTTCAGGTGGTGCTACAATTTTAATTTTCATTGTTGTTGGAGCAAGATTACAAATTTCTTTTTGCATACGATCTGAAATACCAGGGAACATAGTAGAACCACCAGATAGAACAATATTTGAATAAAGATCTTTACGAATATCAACATCACATTTCATAATTGAACTGTAAGTTGTTTCATGAATACCGGAACATTCCATACCTAAGAAACTTGGTTGTAACATTGCTTCAGGACATCGGAAACGTTCATTACCAATTGTAATCACTTGACCATCAGGTAATTCATAGCTTTTCTCAAGAGATGAACTATGTGAAGCAGTACTCATTTCTTGATCGAAGTCCAAAGCAACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AI976797             [TTTTAATCATCAAGAAAATGTAAAACTAATGAACAA TTTTGTGAAAAACAAAATCATAATCA TTTAGACAAGAGTGTTTTGAACGTTACATATGAAAGAGGAAAACAAAAGGAGATAAATATAAATATATAAAATGTACAGTTATGAAGTTAAATTAGAAGCATTTACGATGTACAATAGCTGGACCCGATTCATCATATTCTTGTTTGGTTATCCACATCTGATTGAATGTCGACAATGAAGCTAATATAGAACCACCAATCCATACAGAATATTTACGTTCAGGTGGTGCTACAATTTTAATTTTCATTGTTGTTGGAGCAAGATTACAAATTTCTTTTTGCATACGATCTGAAATACCAGGGAACATAGTAGAACCACCAGATAGAACAATATTTGAATAAAGATCTTTACGAATATCAACATCACATTTCATAATTGAACTGTAAGTTGTTTCATGAATACCGGAACATTCCATACCTAAGAAACTTGGTTGTAACATTGCTTCAGGACATCGGAAACGTTCATTACCAATTGTAATCCCTTGACCATCAAGTAATTCATAGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD074710             [ TTTAATCATCAAAAAAATGTAAAACTAATGAACAA TTTTGTGAAAAACAAAATCATAATCACTTTAAACAAGAATGTTTTGAACGTTATATATGAAAAAGGAAAACAAAAGGAGATTAATATAAATATAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD075488             [                accGTAAAACTAATGAACAATTTTTGTGAAAAACAAAATCATAATCA TTTAGAC TGAGTGTTTTGAACGTTATATATCAAAGAGGAAAACAAAAGGAGATAAATATAAATATATAAAATGTACAGTTATGAAGTTAAATTAGAAGCATTTACGATGTACAATAGCTGGACCCGATTCATCATATTCTTGTTTGGTTATCCACATCTGATTGAATGTCGACAATGAAGCTAATATAGAACCACCAATCCATACAGAATATTTACGTTCAGGTGGTGCTACAATTTTAATTTTCATTGTTGTTGGAGCAAGATTACAAATTTCTTTTTGCATACGATCTGAAATACCAGGGAACATAGTAGAACCACCAGATAGAACAATATTTGAATAAAGATCTTTACGAATATCAACATCACATTTCATAATTGAACTGTAAGTTGTTTCATGAATACCGGAACATTCCATACCTAAGAAACTTGGTTGTAACATTGCTTCAGGACATCGGAAACGTTCATTACCAATTGTAATCACTTGACCATCAGGTAATTCATAGCTTTTCTCAAGAGATGAACTATGTGAAGCAGTACTCATTTCTTGATCGAAGTCCAAAGCAACATAACACAGTTTTTCCTTGATGTCA CGAACAATTTCACGTTCAGCAGTAGTTGTAAAAGAATGACCACGTTCAGTTAATATTTTCATAAGATAATCAGTTAAATCACGACCAGCCAAATCAAGACGAAGAATTGCATGTGGTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL BG930166             [                                                                                                                                                                                           CCCGATTCATCATATTCTTGTTTGGTTATCCACATCTGATTGAATGTCGACAATGAAGCTAATATAGAACCACCAATCCATCGAGAATATTTACGTTCAGGTGGTGCTACAATTTTAATTTTCATTGTTGTTGGAGCAAGATTACAAATTTCTTTTTGCATACGATCTGAAATACCAGGGAGCATAGTAGAt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL BG931285             [                                                                                                                                                                                           tCCGATTCATCATATTCTTGTTTGGTTATCCACATCTGATTGAATGTCGACAATGAAGCTAATATAGAACCACCAATCCATACAGAATATTTACGTTCAGGTGGTGCTACAATTTTAATTTTCATTGTTGTTGGAGCAAGATTACAAATTTC TTTTGCATACGATCTGAAATACCAGGGAACATAGTAGAc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL AI021763             [                                                                                                                                                                                                                                                                   CCAATCCATACAGAATATTTACGTTCAGGTGGTGCTACAATTTTAATTTTCATTGTTGTTGGAGCAAGATTACAAATTTCCTTTTGCATACGATCTGAAATACCAGGGAACATAGTAGAACCACCAGATAGAACAATATTTGAATAAAGATCTTTACGAATATCAACATCACATTTCATAATTGAACTGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD137133             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AAGTTGTTTCATGAATACCGAAACATTCCATACCTAAGAAACTTGGTTGTAACATTGCTTCAGGACATCGGAAACGTTCATTACCAATTGTAATCACTTGACCATCAGGTAATTCATAGCTTTTCTCAAGAGATGAACTATGTGAAGCAGTACTCATTTCTTGATCGAAGTCCAAAGCAACATAACACAGTTTTTCCTTGATGTCA CGAACAATTTCACGTTCAGCAGTAGTTGTAAAAGAATGACCACGTTCAGTTAATATTTTCATAAGATAATCAGTTAAATCGCGACCAGCCAAATCAAGACGAAGAATTGCATGTGGTAAAGCATAACCTTCATAAATAGGAACAGTATGACTTACACCATCTCCTGAATCCAATACTATACCCGTAGTACGACCAGATGCATACAAAGATAAAACTGCCTGAATAGCAACATACATGGCTGGACTGTTGAATGTTTCAAACATGATCTGTG  TCATTTTTTCACGATTTGCTTTGGGATTCATTGGTGCTTCAGTAAGTAGGACAGGGTGT                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD062123             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ACCTAAGAAACTTGGTTGTAACATTGCTTCAGGACATCGGAAACGTTCATTACCAATTGTAATCACTTGACCATCAGGTAATTCATAGCTTTTCTCAAGAGATGAACTATGTGAAGCACTACTCATTTCTTGATCGAAGTCCAAAGCAACATAACACAGTTTTTCCTTGATGTCA CGAACAATTTCACGTTCAGCAGTAGTTGTAAAAGAATGACCACGTTCAGTTAATATTTTCATAAGATAATCAGTTAAATCACGACCAGCCAAATCAAGACGAAGAATTGCATGTGGTAAAGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD061569             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TTGGTTGTAACATTGCTTCAGGACATCGGAAACGTTCATTACCAATTGTAATCACTTGACCATCAGGTAATTCATAGCTTTTCTCAAGAGATGAACTATGTGAA CAGTACTCATTTCTTGATCGAAGTCCAAAGCAACAT ACACAGTTTTTCCT  AAGACACCGAAat                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD129437             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ggtacccTCCAAAGCAACATAACACAGTTTTTCCTTGATGTCA CGAACAATTTCACGTTCAGCAGTAGTTGTAAAAGAATGACCACGTTCAGTTAATATTTTCATAAGATAATCAGTTAAATCACGACCAGCCAAATCAAGACGAAGAATTGCATGTGGTAAAGCATAACCTTCATAAATAGGAACAGTATGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD140452             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TTTTCCTTGATGTCA CGAACAATTTCACGTTCAGCAGTAGTTGTAAAAGAATGACCACGTTCAGTTAATATTTTCATAAGATAATCAGTTAAATCACGACCAGCCAAATCAAGACGAAGAATTGCATGTGGTAAAGCATAACCTTCATAAATAGGAACAGTATGACTTACACCATCTCCTGAATCCAATACTATACCCGTAGTACGACCAGATGCATACAAAGATAAAACTGCCTGAATAGCAACATACATGGCTGGACTGTTGAATGTTTCAAACATGATCTGTG  TCATTTTTTCACGATTTGCCTTAGGATTCATTGGTGCTTCAGTAAGTAGGACAGGGTGTTCTTCTGGGGCTACACGTAATTCATTATAAAATGTATGATGCCATATCTTCTCCATATCATCCCAATTAGAAACAATTCCATGTTCAATAGGATATTTTAAAG                                                                                                                                                                                                                                                                    ]
[-] EMBL AI975352             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TGCATGTGGTANAGCATAACCTTCATAAATAGGAACAGTATGACTTACACCATCTCCTGAATCCAATACTATACCCGTAGTACGACCAGATGCATACAAAGATANAACTGCCTGAATAGCAACATACATGGCTGGACTGTTGAATGTTTCAAACATGATCTGTG  TCATTTTTTCACGATTTGCCTTAGGATTCATTGGTGCTTCAGTAAGTAGGACAGGGTGTTCTTCTGGGGCTACACGTAATTCATTATAAAATGTATGATGCCATATCTTCTCCATATCATCCCAATTAGAAACAATTCCATGTTCAATAGGATATTTTAAAGTTAGAATGCCTCTTTTCGATTGTGCCTCATCACCAACATAACTATCTTTTTGTCCCATACCAACCATAACACCTTGATGTCTTGGACGACCAACAATTGATGGGAATACAGCTCTTGGTGCATCATCACCAGCGAATCCAGCTTTACACATACCCGATCCATTATCAATGACAAGGGCACTTATTTCTTCTTCTGCCATTTG                                                          ]
[-] EMBL CD168685             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CCAGATGCATACAAAGATAAAACTGCCTGAATAGCAACATACATAGCTGGACTGTTGAATGTTTCAAACATGATCTGTG  TCATTTTTTCACGATTTGCCTTAGGATTCATTGGTGCTTCAGTAAGTAGGACAGGGTGTTCTTCTGGGGCTACACGTAATTCATTATAAAATGTATGATGCCATATCTTCTCCATATCATCCCAATTAGAAACAATTCCATGTTCAATAGGATATTTTAAAGTTAGAATGCCTCTTTTCGATTGTGCCTCATCACCAACATAACTATCTTTTTGTCCCATACCAACCATAACACCTTGATGTCTTGGACGACCAACAATTGATGGGAATACAGCTCTTGGTGCATCATCACCAGCGAATCCAGCTTTACACATACCCGATCCATTATCAATGACAAGGGCACTTATTTCTTCTTCCGCCATTTGAGTAAAGCAACCTCAGAGGATTAGTTTTTCTTTAAAACTGAAGGATGTTCTGATGAGT]
[+] EMBL CD168702             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CCTGAATAGCAACATACATAGCTGGACTGTTGAATGTTTCAAACATGATCTGTG  TCATTTTTTCACGATTTGCCTTAGGATTCATTGGTGCTTCAGTAAGTAGGACAGGGTGTTCTTCTGGGGCTACACGTAATTCATTATAAAATGTATGATGCCATATCTTCTCCATATCATCCCAATTAGAAACAATTCCATGTTCAATAGGATATTTTAAAGTTAGAATGCCTCTTTTCGATTGTGCCTCATCACCAACATAACTATCTTTTTGTCCCA                                                                                                                                                                                                           ]
[-] EMBL AI976954             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AATGTTTCAAACATGATCTGTG  TCATTTTTTCACGATTTGCCTTAGGATTCATTGGTGCTTCAGTAAGTAGGACAGGGTGTTCTTCTGGGGCTACACGTAATTCATTATAAAATGTATGATGCCATATCTTCTCCATATCATCCCAATTAGAAACAATTCCATGTTCAATAGGATATTTTAAAGTTAGAATGCCTCTTTTCGATTGTGCCTCATCACCAACATAACTATCTTTTTGTCCCATACCACCCATAACACTTTGATGTTTTGGCCGACCACCAATTGATGGGAATACAGCTCTTGGTGCATCATCACCAGCGAATCCAGCTTTACACATACCCGATCCATTATCAATGCCAAGGGCACTTATTTCTTCTTCTGCCATTTGAGTAAAGCACCCTCA                                           ]
[-] EMBL BG932083             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ggatgGAT TGTGATTCATTTTTTCACGATTTGCCTTAGGATTCATTGGTGCTTCAGTAAGTAGGACAGGGTGTTCTTCTGGGGCTACACGTAATTCATTATAAAATGTATGATGCCATATCTTCTCCATATCATCCCAATTAGAAACAATTCCATGTTCAATAGGATATTTTAAAGTTAGAATGCCTCTTTTCGATTGTGCCTCATCACCAACATAACTATCTTTTTGTCCCATACCAACCATAACACCTTGATGTCTTGGACGAgactcc                                                                                                                                                                     ]
[-] EMBL CD068086             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TTCTTCTGGGGCTACACGTAATTCATTATAAAATGTATGATGCCATATCTTCTCCATATCATCCCAATTAGAAACAATCCCATGTTTAATAGGATATTTTAAAGTTAGAATGCCTCTTTTCGATTGTGCCTCATCACCAACATAACTATCTTTTTGTCCCATACCAACCATAACACCTTGATGTCTTGGACGACCAACAATTGATGGG ACACAGCTCTTGGTGCATCATCACCAGCG ATCCA                                                                                                                        ]




>consensus_10772#0
TTTTAATCATCAAGAAAATGTAAAACTAATGAACAATTTTGTGAAAAACAAAATCATAAT
CATTTAGACAAGAGTGTTTTGAACGTTATATATGAAAGAGGAAAACAAAAGGAGATAAAT
ATAAATATATAAAATGTACAGTTATGAAGTTAAATTAGAAGCATTTACGATGTACAATAG
CTGGACCCGATTCATCATATTCTTGTTTGGTTATCCACATCTGATTGAATGTCGACAATG
AAGCTAATATAGAACCACCAATCCATACAGAATATTTACGTTCAGGTGGTGCTACAATTT
TAATTTTCATTGTTGTTGGAGCAAGATTACAAATTTCTTTTTGCATACGATCTGAAATAC
CAGGGAACATAGTAGAACCACCAGATAGAACAATATTTGAATAAAGATCTTTACGAATAT
CAACATCACATTTCATAATTGAACTGTAAGTTGTTTCATGAATACCGGAACATTCCATAC
CTAAGAAACTTGGTTGTAACATTGCTTCAGGACATCGGAAACGTTCATTACCAATTGTAA
TCACTTGACCATCAGGTAATTCATAGCTTTTCTCAAGAGATGAACTATGTGAAGCAGTAC
TCATTTCTTGATCGAAGTCCAAAGCAACATAACACAGTTTTTCCTTGATGTCACGAACAA
TTTCACGTTCAGCAGTAGTTGTAAAAGAATGACCACGTTCAGTTAATATTTTCATAAGAT
AATCAGTTAAATCACGACCAGCCAAATCAAGACGAAGAATTGCATGTGGTAAAGCATAAC
CTTCATAAATAGGAACAGTATGACTTACACCATCTCCTGAATCCAATACTATACCCGTAG
TACGACCAGATGCATACAAAGATAAAACTGCCTGAATAGCAACATACATGGCTGGACTGT
TGAATGTTTCAAACATGATCTGTGTCATTTTTTCACGATTTGCCTTAGGATTCATTGGTG
CTTCAGTAAGTAGGACAGGGTGTTCTTCTGGGGCTACACGTAATTCATTATAAAATGTAT
GATGCCATATCTTCTCCATATCATCCCAATTAGAAACAATTCCATGTTCAATAGGATATT
TTAAAGTTAGAATGCCTCTTTTCGATTGTGCCTCATCACCAACATAACTATCTTTTTGTC
CCATACCAACCATAACACCTTGATGTCTTGGACGACCAACAATTGATGGGAATACAGCTC
TTGGTGCATCATCACCAGCGAATCCAGCTTTACACATACCCGATCCATTATCAATGACAA
GGGCACTTATTTCTTCTTCTGCCATTTGAGTAAAGCAACCTCAGAGGATTAGTTTTTCTT
TAAAACTGAAGGATGTTCTGATGAGT

consensusID : consensus_10772#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 381
fasta sequence

                              [AATATTTACGTTCGGGTGGTGCCACCATTNTAATTTTCATTGTTGTTGGAGCCAAGACCACCAATTTCCTTTTTTGCATACGATCTGAAAATACCCAGGGAACATAGTAGAACCCACCAGATAGGACAATATTAGAATAGAGATCTTTACGAATATCCAACATCACATTTCATAATTGAACTGTAAGTTGTTTCATGAATACCGGAACATTCCATACCTAAGAAACTTGGTCTAAATAATGCTTCAGGACATCGAAATCGATCATTTCCAACTGTAATCATCTGACCATCAGGTAATTCATAACTTTTCTCAAGAGATGAACTATGTGAAGCAGTACTCATTTCTTGATCGNAGTCCAAAGCAACATAACACAGTTTTTNC]

[-] EMBL SM596                [AATATTTACGTTCGGGTGGTGCCACCATTNTAATTTTCATTGTTGTTGGAGCCAAGACCACCAATTTCCTTTTTTGCATACGATCTGAAAATACCCAGGGAACATAGTAGAACCCACCAGATAGGACAATATTAGAATAGAGATCTTTACGAATATCCAACATCACATTTCATAATTGAACTGTAAGTTGTTTCATGAATACCGGAACATTCCATACCTAAGAAACTTGGTCTAAATAATGCTTCAGGACATCGAAATCGATCATTTCCAACTGTAATCATCTGACCATCAGGTAATTCATAACTTTTCTCAAGAGATGAACTATGTGAAGCAGTACTCATTTCTTGATCGNAGTCCAAAGCAACATAACACAGTTTTTNC]




>consensus_10772#1
AATATTTACGTTCGGGTGGTGCCACCATTNTAATTTTCATTGTTGTTGGAGCCAAGACCA
CCAATTTCCTTTTTTGCATACGATCTGAAAATACCCAGGGAACATAGTAGAACCCACCAG
ATAGGACAATATTAGAATAGAGATCTTTACGAATATCCAACATCACATTTCATAATTGAA
CTGTAAGTTGTTTCATGAATACCGGAACATTCCATACCTAAGAAACTTGGTCTAAATAAT
GCTTCAGGACATCGAAATCGATCATTTCCAACTGTAATCATCTGACCATCAGGTAATTCA
TAACTTTTCTCAAGAGATGAACTATGTGAAGCAGTACTCATTTCTTGATCGNAGTCCAAA
GCAACATAACACAGTTTTTNC

consensusID : consensus_10772#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 330
fasta sequence

                              [CCCGGTACCCCTGGACTGTTGAATGTTCCAAACATGATCTGTGTCATTTTTTCACGATTTGCCTTAGGATTCATTGGTGCTTCAGTAAGTAGGACAGGGTGTTCTTCTGGGGCTACACGTAATTCATTATAAAATGTATGATGCCATATCTTCTCCATATCATCCCAATTAGTAACAATTCCATGTTCAATAGGATATTTTAGAGTTAGAATGCCTCTTTTCGATTGTGCCTCATCACCAACATAACTATCTTTTTGTCCATACCAACCATAACACCTTGATGTCTTGGACAACCAACAATTGATGGGAATACAGCTCTTGGTGCATCAT]

[+] EMBL CD129587             [CCCGGTACCCCTGGACTGTTGAATGTTCCAAACATGATCTGTGTCATTTTTTCACGATTTGCCTTAGGATTCATTGGTGCTTCAGTAAGTAGGACAGGGTGTTCTTCTGGGGCTACACGTAATTCATTATAAAATGTATGATGCCATATCTTCTCCATATCATCCCAATTAGTAACAATTCCATGTTCAATAGGATATTTTAGAGTTAGAATGCCTCTTTTCGATTGTGCCTCATCACCAACATAACTATCTTTTTGTCCATACCAACCATAACACCTTGATGTCTTGGACAACCAACAATTGATGGGAATACAGCTCTTGGTGCATCAT]




>consensus_10772#2
CCCGGTACCCCTGGACTGTTGAATGTTCCAAACATGATCTGTGTCATTTTTTCACGATTT
GCCTTAGGATTCATTGGTGCTTCAGTAAGTAGGACAGGGTGTTCTTCTGGGGCTACACGT
AATTCATTATAAAATGTATGATGCCATATCTTCTCCATATCATCCCAATTAGTAACAATT
CCATGTTCAATAGGATATTTTAGAGTTAGAATGCCTCTTTTCGATTGTGCCTCATCACCA
ACATAACTATCTTTTTGTCCATACCAACCATAACACCTTGATGTCTTGGACAACCAACAA
TTGATGGGAATACAGCTCTTGGTGCATCAT

consensusID : consensus_10772#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 269
fasta sequence

                              [TGATTCATTTTTTCACGATTTGCCTTAGGATTCATTGGTGCTTCAGTAAGTAGGACAGGGTGTTCTTCTGGGGCTACACGTAATTCATTATAAAATGTATGATGCCATATGTTCTCCATATCATCCCAATTAGACACAATTCCATGTTCAATAGGATATTTTAAAGTTAGAATGCCTCTTTTCGATTGTGCTTCATCACCGACATAATTATCTTTTTGTCCCATACCAACCATGACACGTTGATGTAGAGGACGAGACTCCATCCATTC]

[-] EMBL BG932114             [TGATTCATTTTTTCACGATTTGCCTTAGGATTCATTGGTGCTTCAGTAAGTAGGACAGGGTGTTCTTCTGGGGCTACACGTAATTCATTATAAAATGTATGATGCCATATGTTCTCCATATCATCCCAATTAGACACAATTCCATGTTCAATAGGATATTTTAAAGTTAGAATGCCTCTTTTCGATTGTGCTTCATCACCGACATAATTATCTTTTTGTCCCATACCAACCATGACACGTTGATGTAGAGGACGAGACTCCATCCATTC]




>consensus_10772#3
TGATTCATTTTTTCACGATTTGCCTTAGGATTCATTGGTGCTTCAGTAAGTAGGACAGGG
TGTTCTTCTGGGGCTACACGTAATTCATTATAAAATGTATGATGCCATATGTTCTCCATA
TCATCCCAATTAGACACAATTCCATGTTCAATAGGATATTTTAAAGTTAGAATGCCTCTT
TTCGATTGTGCTTCATCACCGACATAATTATCTTTTTGTCCCATACCAACCATGACACGT
TGATGTAGAGGACGAGACTCCATCCATTC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10772#2      ------------------------------------------------------------
consensus_10772#3      ------------------------------------------------------------
consensus_10772#0      TTTTAATCATCAAGAAAATGTAAAACTAATGAACAATTTTGTGAAAAACAAAATCATAAT 60
consensus_10772#1      ------------------------------------------------------------
                                                                                   

consensus_10772#2      ------------------------------------------------------------
consensus_10772#3      ------------------------------------------------------------
consensus_10772#0      CATTTAGACAAGAGTGTTTTGAACGTTATATATGAAAGAGGAAAACAAAAGGAGATAAAT 120
consensus_10772#1      ------------------------------------------------------------
                                                                                   

consensus_10772#2      ------------------------------------------------------------
consensus_10772#3      ------------------------------------------------------------
consensus_10772#0      ATAAATATATAAAATGTACAGTTATGAAGTTAAATTAGAAGCATTTACGATGTACAATAG 180
consensus_10772#1      ------------------------------------------------------------
                                                                                   

consensus_10772#2      ------------------------------------------------------------
consensus_10772#3      ------------------------------------------------------------
consensus_10772#0      CTGGACCCGATTCATCATATTCTTGTTTGGTTATCCACATCTGATTGAATGTCGACAATG 240
consensus_10772#1      ------------------------------------------------------------
                                                                                   

consensus_10772#2      ------------------------------------------------------------
consensus_10772#3      ------------------------------------------------------------
consensus_10772#0      AAGCTAATATAGAACCACCAATCCATACAGAATATTTACGTTCAGGTGGTGCTACAATTT 300
consensus_10772#1      ------------------------------------------------------------
                                                                                   

consensus_10772#2      ------------------------------------------------------------
consensus_10772#3      ------------------------------------------------------------
consensus_10772#0      TAATTTTCATTGTTGTTGGAGCAAGATTACAAATTTCTTTTTGCATACGATCTGAAATAC 360
consensus_10772#1      ------------------------------------------------------------
                                                                                   

consensus_10772#2      ------------------------------------------------------------
consensus_10772#3      ------------------------------------------------------------
consensus_10772#0      CAGGGAACATAGTAGAACCACCAGATAGAACAATATTTGAATAAAGATCTTTACGAATAT 420
consensus_10772#1      ------------------------------------------------------------
                                                                                   

consensus_10772#2      ------------------------------------------------------------
consensus_10772#3      ------------------------------------------------------------
consensus_10772#0      CAACATCACATTTCATAATTGAACTGTAAGTTGTTTCATGAATACCGGAACATTCCATAC 480
consensus_10772#1      ------------------------------------------------------------
                                                                                   

consensus_10772#2      ------------------------------------------------------------
consensus_10772#3      ------------------------------------------------------------
consensus_10772#0      CTAAGAAACTTGGTTGTAACATTGCTTCAGGACATCGGAAACGTTCATTACCAATTGTAA 540
consensus_10772#1      ------------------------------------------------------------
                                                                                   

consensus_10772#2      ------------------------------------------------------------
consensus_10772#3      ------------------------------------------------------------
consensus_10772#0      TCACTTGACCATCAGGTAATTCATAGCTTTTCTCAAGAGATGAACTATGTGAAGCAGTAC 600
consensus_10772#1      ------------------------------------------------------------
                                                                                   

consensus_10772#2      ------------------------------------------------------------
consensus_10772#3      ------------------------------------------------------------
consensus_10772#0      TCATTTCTTGATCGAAGTCCAAAGCAACATAACACAGTTTTTCCTTGATGTCACGAACAA 660
consensus_10772#1      ------------------------------------------------------------
                                                                                   

consensus_10772#2      ------------------------------------------------------------
consensus_10772#3      ------------------------------------------------------------
consensus_10772#0      TTTCACGTTCAGCAGTAGTTGTAAAAGAATGACCACGTTCAGTTAATATTTTCATAAGAT 720
consensus_10772#1      ------------------------------------------------------------
                                                                                   

consensus_10772#2      ------------------------------------------------------------
consensus_10772#3      ------------------------------------------------------------
consensus_10772#0      AATCAGTTAAATCACGACCAGCCAAATCAAGACGAAGAATTGCATGTGGTAAAGCATAAC 780
consensus_10772#1      ------------------------------------------------------------
                                                                                   

consensus_10772#2      ------------------------------------------------------------
consensus_10772#3      ------------------------------------------------------------
consensus_10772#0      CTTCATAAATAGGAACAGTATGACTTACACCATCTCCTGAATCCAATACTATACCCGTAG 840
consensus_10772#1      ------------------------------------------------------------
                                                                                   

consensus_10772#2      -----------------------------------------CCCGGTACCCCTGGACTGT 19
consensus_10772#3      ------------------------------------------------------------
consensus_10772#0      TACGACCAGATGCATACAAAGATAAAACTGCCTGAATAGCAACATACATGGCTGGACTGT 900
consensus_10772#1      ------------------AATATTTACGTTCGGGTGGTGCCACCATTNTAATTTTCATTG 42
                                                                                   

consensus_10772#2      TGAATGTTCCAAACATGATCTGTGTCATTTTTT---CACGATTTGC-----CTTAGGATT 71
consensus_10772#3      --------------------TGATTCATTTTTT---CACGATTTGC-----CTTAGGATT 32
consensus_10772#0      TGAATGTTTCAAACATGATCTGTGTCATTTTTT---CACGATTTGC-----CTTAGGATT 952
consensus_10772#1      TTGTTGGAGCCAAGACCACCAATTTCCTTTTTTGCATACGATCTGAAAATACCCAGGGAA 102
                                               ** ******    ***** **      *  ***   

consensus_10772#2      CATTGGTGC-TTCAGTAAGTAGGACAGGGT----------GTTCTTCTGGGGCTACA--- 117
consensus_10772#3      CATTGGTGC-TTCAGTAAGTAGGACAGGGT----------GTTCTTCTGGGGCTACA--- 78
consensus_10772#0      CATTGGTGC-TTCAGTAAGTAGGACAGGGT----------GTTCTTCTGGGGCTACA--- 998
consensus_10772#1      CATAGTAGAACCCACCAGATAGGACAATATTAGAATAGAGATCTTTACGAATATCCAACA 162
                       *** *  *    **  *  *******   *           *  **  *    * **   

consensus_10772#2      -CGTAATTCATTATAAAA-TGTATGATGCCATATCTTCTCCATATCATCCCAATTAGTAA 175
consensus_10772#3      -CGTAATTCATTATAAAA-TGTATGATGCCATATGTTCTCCATATCATCCCAATTAGACA 136
consensus_10772#0      -CGTAATTCATTATAAAA-TGTATGATGCCATATCTTCTCCATATCATCCCAATTAGAAA 1056
consensus_10772#1      TCACATTTCATAATTGAACTGTAAGTTGTTTCATGAATACCGGAACATTCCATACCTAAG 222
                        *  * ***** **  ** **** * **    **     **  * *** ***        

consensus_10772#2      CAATTCCATGTTCAATAGGATATTTTAGAGTTAGAATGCCTC-TTTTCGATTGTG----C 230
consensus_10772#3      CAATTCCATGTTCAATAGGATATTTTAAAGTTAGAATGCCTC-TTTTCGATTGTG----C 191
consensus_10772#0      CAATTCCATGTTCAATAGGATATTTTAAAGTTAGAATGCCTC-TTTTCGATTGTG----C 1111
consensus_10772#1      AAACTTGGT-CTAAATAATGCTTCAGGACATCGAAATCGATCATTTCCAACTGTAATCAT 281
                        ** *   *  * ****     *       *   ***   ** *** * * ***      

consensus_10772#2      CTCATCACCAACATAACTAT--CTTTTTGTCC-ATACCAACCATAACA-----CCTTGAT 282
consensus_10772#3      TTCATCACCGACATAATTAT--CTTTTTGTCCCATACCAACCATGACA-----CGTTGAT 244
consensus_10772#0      CTCATCACCAACATAACTAT--CTTTTTGTCCCATACCAACCATAACA-----CCTTGAT 1164
consensus_10772#1      CTGACCATCAGGTAATTCATAACTTTTCTCAAGAGATGAACTATGTGAAGCAGTACTCAT 341
                        * * ** *     *   **  *****      * *  *** **   *        * **

consensus_10772#2      GTCTTGGACAACCAACAATTGATGGGAATACAGCTCTTGGTGCATCAT------------ 330
consensus_10772#3      GTAGAGGACGAGACTCCATCCATTC----------------------------------- 269
consensus_10772#0      GTCTTGGACGACCAACAATTGATGGGAATACAGCTCTTGGTGCATCATCACCAGCGAATC 1224
consensus_10772#1      TTCTTGATCGNAGTCCAAAGCAACATAACACAGTTTTTNC-------------------- 381
                        *   *  *      * *   *                                      

consensus_10772#2      ------------------------------------------------------------
consensus_10772#3      ------------------------------------------------------------
consensus_10772#0      CAGCTTTACACATACCCGATCCATTATCAATGACAAGGGCACTTATTTCTTCTTCTGCCA 1284
consensus_10772#1      ------------------------------------------------------------
                                                                                   

consensus_10772#2      ------------------------------------------------------------
consensus_10772#3      ------------------------------------------------------------
consensus_10772#0      TTTGAGTAAAGCAACCTCAGAGGATTAGTTTTTCTTTAAAACTGAAGGATGTTCTGATGA 1344
consensus_10772#1      ------------------------------------------------------------
                                                                                   

consensus_10772#2      --
consensus_10772#3      --
consensus_10772#0      GT 1346
consensus_10772#1      --