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Schistosoma mansoni
cluster # 10774 cluster # 10774       Sequences # 21       consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10774#0 length = 1727 sequences # 15  
consensus_10774#1 length = 512 sequences # 3  
 consensus_10774#2 length = 375 sequences # 1  
consensus_10774#3 length = 341 sequences # 2  
consensusID : consensus_10774#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 15
consensus length = 1727
fasta sequence 
                              [CTCGAGGCCAAAATTCGGCACGAGGGGTAACAATCCATACTGCAGTGAAACAAGGTGATTTCGCGGCTCTCAAGGAAATGATTTCATGTGGAGCCAGTGTAAATGAAGTAGATAAGCATTCCTTTACACCTTTGCACTGGGCTGCTAACGTAGGTGCGATAGAGATTCTACAATATCTACTGTGGAAGAATGCTGATCCTTTATTGGTGACCAAAAATGGTTGGACGCCCGTTCATATAGCTGCCATCCGAGGCTATGAGAAATGTATACAGTCACTGGTTGACAGAGGTGTAAGTGTCTCCGTTAAAGACAAATACGGTCAAACTCCTGGCCATCTGGCTTCGATACATGGAAATTCCAGCAGTCTTTTAACTCTCCTACGTGCTGGTGCTGATCTTGAAACGGTGGATGTTAGTGGATGGACAATGTTACATGCAGCTGCGTTTCACGGACGACTGGGATGTGTTCAAGTGTTACTAAGGTGGGATCTACGAATAGAGGATACGGATAAAGCTGGAAACAATGCTGCTCATCTAGCAGCAATGGAAGGTCATTTACCTGTGTTAAAGTACCTAATGAGTCAAGTCCAAACTCCATTGTATGTACTTGACACTCCCAATGATCATGGAGAAACTGCTGAAGCTCTAGCCAAACGGTTTTTGAAAAACGATGTTGAGTCGTATATAAATAAAATCAAAACAGAACAGACATTCCATAGAGGATCAGAATAC--TCAGAGATA-TTGGC-GTTTCCAGCACATTCAGCTGCTTATTCTGGAAACTTAATCCAACTACGTGTTTTAATAGAATCAGGGACCGTAAAGATAGATGAAAGAGATGAACAGGGTGCAACACCATTACACAAAGCTGCTGGTCAAGGACACCTTAAGATAATTCAATGGCTTCGAGAAAACGGTGCTGATCCAAAGTTAAGAAATGAACTGGGTGAATCACCAGCCGATGTAGCTAGAAGATATGGTCAGTTAGGAGCGCTAAAACTTTTATCATCTAAATCTGATGAAGAATGTGAGAATGATGAAATTTCAGATATTATAGATTTACCATCTGATATTCCGCTTGGTTATACTGAAGGCGAAAAAATGCATCAGCTCATAGTGGATAAAAATGGCGCAATCGGTAGAGCTAAAATTAGAATTGAAAAATTGGAACGTTTGTTAGAATTGGCTAAATCAGATTATAAGCAACTGGATGGTCCAATAGATAAAGAAGAAAGACAAAGAATCGATGCCTTGAATGAACTTGGCCGAAATTACGAAAAACAGATTGAAGAATTGAAAGCAACATTGGAATGTGAACGTATCTACCGTGAAAAACTGGAGTCACGTTTAGATGAGTCAAGACGCGAAGTTGCTACATTAACCATGAAGCTAAATGAAAGTCATTCCGGTTCCTCTGACAATTACCTTACTAATAAATCAAAAGTTCAACAAAATTTCGATTATCAAAATAACAAAAAAATCAATAAATTTAATGGAAGTATAAGTAGTATTGAAAGTAGTAATAGTAATGTATGTA-T-AAAAAATATAAAAACCAATAATAATCATAAAAAGTTTAAAACAAAATAAATTATGTAACAAGTTTTTTTCTTGTTTGTGTGTGTATATTACTTAAATATTTATTAAGATTATAAACTGAGTATCTTTACTGGTAATCATGAATTAATTTAAATACAATTACAGAATCATATCTTTTTTTAATATAATTCTATT]

[+] EMBL CD082660             [CTCGAGGCCAAAATTCGGCACGAGGGGTAACAATCCATACTGCAGTGAAACAAGGTGATTTCGCGGCTCTCAAGGAAATGATTTCATGTGGAGCCAGTGTAAATGAAGTAGATAAGCATTCCTTTACACCTTTGCACTGGGCTGCTAACGTAGGTGCGATAGAGATTCTACAATATCTACTGTGGAAGAATGCTGATCCTTTATTGGTGACCAAAAATGGTTGGACGCCCGTTCATATAGCTGCCATCCGAGGCTATGAGAAATGTATACAGTCACTGGTTGACAGAGGTGTAAGTGTCTCCGTTAAAGACAAATACGGTCAAACTCCTGGCCATCTGGCTTCGATACATGGAAATTCCAGCAGTCTTTTAACTCTCCTACGTGCTGGTGCTGATCTTGAAACGGTGGATGTTAGTGGATGGACAATGTTACATGCAGCTGCGTTTCACGGACGACTGGGATGTGTTCAAGTGTTACTAAGGTGGGATCTACGAATAGAGGATACGGATAAAGCTGGAAACAATGCTGCTCATCTAGCAGCAATGGAAGGTCATTTACCTGTGTTAAAGTACCTAATGAGTCAAGTCCAAACTCCATTGTATGTACTTGACACTCCCAATGATCATGGAGAAACTGCTGAAGCTCTAGCCAAACGGTTn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD171292             [                                                                                                                                                                                                                                                                                                                                                           CATGGAAATTCCAGCAGTCTTTTAACTCTCCTACGTGCTGGTGCTGATCTTGAAACGGTGGATGTTAGTGGATGGACAATGTTACATGCAGCTGCGTTTCACGGACGACTGGGATGTGTTCAAGTGTTACTAAGGTGGGATCTACGAATAGAGGATACGGATAAAGCTGGAAACAATGCTGCTCATCTAGCGGCAATGGAAGGTCATTTACCTGTGTTAAAGTACCTAATGAGTCAAGTCCAAACTCCATTGTATGTACTTGACACTCCCAATGATCATGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD171347             [                                                                                                                                                                                                                                                                                                                                                           CATGGAAATTCCAGCAGTCTTTTAACTCTCCTACGTGCTGGTGCTGATCTTGAAACGGTGGATGTTAGTGGATGGACAATGTTACATGCAGCTGCGTTTCACGGACGACTGGGATGTGTTCAAGTGTTACTAAGGTGGGATCTACGAATAGAGGATACGGATAAAGCTGGAAACAATGCTGCTCATCTAGCAGCAATGGAAGGTCATTTACCTGTGTTAAAGTACCTAATGAGTCAAGTCCAAACTCCATTGTATGTACTTGACACTTCCAATGATCATGGAGAAACTGCTGAAGCTCTAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD137772             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GGATGTGTTCAAGTGTTACTAAGGTGGGATCTACGAATAGAGGATACGGATAAAGCTGGAAACAATGCTGCTCATCTAGCAGCAATGGAAGGTCATTTACCTGTGTTAAAGTACCTAATGAGTCAAGTCCAAACTCCATTGTATGTACTTGACACTCCCAATGATCATGGAGAAACTGCTGAAGCTCTAGCCAAACGGTTTTTGAAAAACGATGTTGAGTCGTATATAAATAAAATCAAAACAGAACAGACATTCCATAGAGGATCAGAATAC  TCAGAGATA TTGGC ATTTCCAGCACATTCAGCTGCTTATTCTGGAAACTTAATCCAACTACGTGTTTTAATAGAATCAGGGACt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD195513             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AGGTGGGATCTACGAATAGAGGATACGGATAAAGCTGGAAACAATGCTGCTCATCTAGCAGCAATGGAAGGTCATTTACCTGTGTTAAAGTACTTAATGAGTCAAGTCCAAACTCCATTGTATGTACTTGACACTCCCAATGATCATGGAGAAACTGCTGAAGCTCTAGCCAAACGGTTTTTGAAAAACGATGTTGAGTCGTATATAAATAAAATCAAAACAGAACAGACATTCCATAGAGGATCAGAATAC  TCAGAGATA TTGGC GTTTCCAGCACATTCAGCTGCTTATTCTGGAAACTTAATCCAACTACGTGTTTTAATAGAATCAGGGACCGTAAAGATAGATGAAAGAGATGAACAGGGTGCAACACCATTACACAAAGCTGCTGGTCAAGGACACCTTAAGATAATTCAATGGCTTCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD078107             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CGTATATAAATAAAATCAAAACAGAACAGACATTCCATAGAGGATCAGAATAC  TCAGAGATA TTGGC GTTTCCAGCACATTCAGCTGCTTATTCTGGAAACTTAATCCAACTACGTGTTTTAATAGAATCAGGGACCGTAAAGATAGATGAAAGAGATGAACAGGGTGCAACACCATTACACAAAGCTGCTGGTCAAGGACACCTTAAGATAATTCAATGGCTTCGAGAAAACGGTGCTGATCCAAAGTTAAGAAATGAACTGGGTGAATCACCAGCCGATGTAGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD082793             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GGATCAGAATAC  TCAGAGATA TTGGC GTTTCCAGCACATTCAGCTGCTTATTCTGGAAACTTAATCCAACTACGTGTTTTAATAGAATCAGGGACTGTAAAGATAGATGAAAGAGATGAACAGGGTGCAACACCATTACACAAAGCTGCTGGTCAAGGACACCTTAAGATAATTCAATGGCTTCGAGAAAACGGTGCTGATCCAAAGTTAAGAAATGAACTGGGTGAATCACCAGCCGATGTAGCTAGAAGATATGGTCAGTTAGGAGCGCTAAAACTTTTATCATCTAAATCTGATGAAGAATGTGAGAATGATGAAATTTCAGATATTATAGATTTACCATCTGATATTCCGCTTGGTTATACTGAAGGCGAAAAAATGCATCAGCTCATAGTGGATAAAAATGGCGCAATCGGTAGAGCTAAAATTAGAATTGAAAAATTGGAACGTTTGTTAGAATTGGCTAAATCAGATTATAAGCAACTGGATGGTCCAATAGATAAAGAAGAAAGAACAAGAATCGATGCCTTGAATGAACTTGGCCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD082815             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AATACCTTCAGAGATATTTGGCGGTTTCCAGCACATTCAGCTGCTTATTCTGGAAACTTAATCCAACTACGTGTTTTAATAGAATCAGGGACCGTAAAGATAGATGAAAGAGATGAACAGGGTGCAACACCATTACACAAAGCTGCTGGTCAAGGACACCTTAAGATAATTCAATGGCTTCGAGAAAACGGTGCTGATCCAAAGGTAAGAAATGAACTGGGTGAATCACCAGCCGATGTAGCTAGAAGATATGGTCAGTTAGGAGCGCTAAAACTTTTATCATCTAAATCTGATGAAGAATGTGAGAATGATGAAATTTCAGATATTATAGATTTACCATCTGATATTCCGCTTGGTTATACTGAAGGCGAAAAAATGCATCAGCTCATAGTGGATAAAAATGGCGCAATCGGTAGAGCTAAAATTAGAATTGAAAAATTGGAACGTTTGTTAGAATTGGCTAAATCAGATTATAAGCAACTGGATGGTCCAATAGATAAAGAAGAAAGACAAAGAATCGATGCCTTGAATGAACTTGGCCGAAATTACGAAAAACAGATTGAAGAATTGAAAGCAACATTGGAATGTGAACGTATCTACCGTGAAAAACTGGAGTCACGTTTAGATGAGTCAAGACGCGAAGTTGCTACATTAA                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD080353             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGGCTTCGAGAAAACGGTGCTGATCCAAAGTTAAGAAATGAACTGGGTGAATCACCAGCCGATGTAGCTAGAAGATATGGTCAGTTAGGAGCGCTAAAACTTTTATCATCTAAATCTGATGAAGAATGTGAGAATGATGAAATTTCAGATATTATAGATTTACCATCTGATATTCCGCTTGGTTATACTGAAGGCGAAAAAATGCATCAGCTCATAGTGGATAAAAATGGCGCAATCGGTAGAGCTAAAATTAGAATTGAAAAATTGGAACGTTTGTTAGAATTGGCTAAATCAGATTATAAGCAACTGGATGGTCCAATAGATAAAGAAGAAAGACAAAGAATCGATGCCTTGAATGAACTTGGCCGAAATTACGAAAAACAGATTGAAGAATTGAAAGCAACATTGGAATGTGAACGTATCTACCGTGAAAAACTGGAGTCACGTTTAGATGAGTCAAGACGCGAAGTTGCTACATTAACCATGAAGCTAAATGAAAGTCATTCCGGTTCCTCTGACAATTACCTTACTAATAAATCAAAAGTTCAACANAATTTCGATTATCAAAATAACAAAAAAATCAATAAATTTAATGGAAGTATAAGTAGTATTGAAAGTAGTAATAGTAATGTATGTA T AAAAAATATTAAACCCAATAtatc                                                                                                                                                                         ]
[-] EMBL CD065739             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AGAATGATG AATTTCAGATATTATAGATTTACCATCTGATATTCCGCTTGGTTATACTGAAGGCGAAAAAATGCATCAGCTCATAGTGGATAAAAATGGCGCAATCGGTAGAGCTAAAATTAGAATTGAAAAATTGGAACGTTTGTTAGAATTGGCTAAATCAGATTATAAGCAACTGGATGGTCCAATAGATAAAGAAGAAAGACAAAGAATCGATGCCTTGAATGAACGTGGCCGAAATTACGACAAACAGATTGAAGAATTGAAAGCAACATTGGAATGTGAACGTATCTACCGTGCAAAACTGGAGTCACGTTTAGATGAGTCAAGACGCGAAGTTGCTACATTAACCATGAAGCTAAATGAAAGTCATTCCGGTTCCTCTGACAATTACCTTACTca                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD076407             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GCTANAATTAGAATTGAAAAATTGGAACGTTTGTTAGAATTGGCTAAATCAGATTATAAGCAACTGGATGGTCCAATAGATAAAGAAGAAAGCCAAAGAATCGATGCCTTGAATGAACTTGGCCGAAATTACGAAAAACAGATTGAAGAATTGAAAGCAACATTGGAATGTGAACGTATCTACCGTGAAAAACTGGAGTCACGTTTAGATGAGTCAAGACGCGAAGTTGCTACATTAACCATGAAGCTAAATGAAAGTCATTCCGGTTCCTCTGACAATTACCTTACTAATAAATCAAAAGTTCAACAAAATTTCGATTATCAAAATAACAAAAAAATCAATAAATTTAATGGAAGTATAAGTAGTATTGAAAGTAGTAATAGTAATGTATGTA TAAAAAAATATAAAAACAAATAATAATCATAAAAAGTTTAAAACAAAATAAATTATGTAACAAGTTTTTTTCTTGTTTGTGTGTGTATATTACTTAAATATTTATTAAGATTATAAACTGAGTATCTTTACTGGTAATCATGAATTAATTTAAATACAATTACAGAATCATATCTTTTTTTAATATA        ]
[-] EMBL CD074269             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CTAAAATTAGAATTGAAAAATTGGAACGTTTGTTAGAATTGGCTAAATCAGATTATAAGCAACTGGATGGTCCAATAGATAAAGAAGAAAGCCAAAGAATCGATGCCTTGAATGAACTTGGCCGAAATTACGAAAAACAGATTGAAGAATTGAAAGCAACATTGGAATGTGAACGTATCTACCGTGAAAAACTGGAGTCACGTTTAGATGAGTCAAGACGCGAAGTTGCTACATTAACCATGAAGCTAAATGAAAGTCATTCCGGTTCCTCTGACAATTACCTTACTAATAAATCAAAAGTTCAACAAAATTTCGATTATCAAAATAACAAAAAAATCAATAAATTTAATGGAAGTATAAGTAGTATTGAAAGTAGTAATAGTAATGTATGTA TAAAAAAATATAAAAACAAATAATAATCATAAAAAGTTTAAAACAAAATAAATTATGTAACAAGTTTTTTTCTTGTTTGTGTGTGTATATTACTTAAATATTTATTAAGATTATAAACTGAGTATCTTTACTGGTAATCATGAATTAATTTAAATACAATTACAGAATCATATCTTTTTTTAATATA        ]
[-] EMBL AI975291             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TGTTAGAATTGGTTAAATCAGATTATAAGCACCTGGATGGTCCAATAGATAAAGAAGAAAGNCAAAGAATCGATGCCTTGAATGAACTTGGCCGAAATTACGAAAAACAGATTGAAGAATTGAAAGCAACATTGGAATGTGAACGTATCTACCGTGAAAAACTGGAGTCACGTTTAGATGAGTCAAGACGCGAAGTTGCTACATTAACCATGAAGCTAAATGAAAGTCATTCCGGTTCCTCTGACAATTACCTTACTAATAAATCAAAAGTTCAACAAAATTTCGATTATCAAAATAACAAAAAAATCAATAAATTTAATGGAAGTATAAGTAGTATTGAAAGTAGTAATAGTAATGTATGTA TAAAAAAATATAAAAACAAATAATAATCATAAAAAGTTTAAAACAAAATAAATTATGTAACAAGTTTTTTTCTTGTTTGTGTGTGTATATTACTTAAATATTTATTAAGATTATAAACTGAGTATCTTTACTGGTAATCATGAATTAATTTAAATACAATTACAGAATCATATCTTTTTTTAATATAATTCTATT]
[-] EMBL CD074450             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   cCAAAGAATCGATGCCTTGAATGAACTTGGCCGAAATTACGAAAAACAGATTGAAGAATTGAAAGCAACATTGGAATGTGAACGTATCTACCGTGAAAAACTGGAGTCACGTTTAGATGAGTCAAGACGCGAAGTTGCTACATTAACCATGAAGCTAAATGAAAGTCATTCCGGTTCCTCTGACAATTACCTTACTAATAAATCAAAAGTTCAACAAAATTTCGATTATCAAAATAACAAAAAAATCAATAAATTTAATGGAAGTATAAGTAGTATTGAAAGTAGTAATAGTTATGTATGTATT AAAAAATATATTAACCAATAATAATCATAAAAAGTTTAAAACAAAATAAATTATGTAACAAGTTTTTTTCTTGTTTGTGTGTGTATATTACTTAAATATTTATTAAGATTATAAACTGAGTATCTTTACTGGTAATCATGAATTAATTTAAATACAATTACAGAATCATATCTTTTTTTAATATA        ]
[-] EMBL CD076386             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AATAGTAATGTATGTA TAAAAAAATATAAAACCCAATAATAATCATAAAAAGTTTAAAACAAAATAAATTATGTAACAAGTTTTTTTCTTGTTTGTGTGTGTATATTACTTAAATATTTATTAAGATTATAAACTGAGTATCTTTACTGGTAATCATGAATTAATTTAAATACAATTACAGAATCATATCTTTTTTTAATATA        ]




>consensus_10774#0
CTCGAGGCCAAAATTCGGCACGAGGGGTAACAATCCATACTGCAGTGAAACAAGGTGATT
TCGCGGCTCTCAAGGAAATGATTTCATGTGGAGCCAGTGTAAATGAAGTAGATAAGCATT
CCTTTACACCTTTGCACTGGGCTGCTAACGTAGGTGCGATAGAGATTCTACAATATCTAC
TGTGGAAGAATGCTGATCCTTTATTGGTGACCAAAAATGGTTGGACGCCCGTTCATATAG
CTGCCATCCGAGGCTATGAGAAATGTATACAGTCACTGGTTGACAGAGGTGTAAGTGTCT
CCGTTAAAGACAAATACGGTCAAACTCCTGGCCATCTGGCTTCGATACATGGAAATTCCA
GCAGTCTTTTAACTCTCCTACGTGCTGGTGCTGATCTTGAAACGGTGGATGTTAGTGGAT
GGACAATGTTACATGCAGCTGCGTTTCACGGACGACTGGGATGTGTTCAAGTGTTACTAA
GGTGGGATCTACGAATAGAGGATACGGATAAAGCTGGAAACAATGCTGCTCATCTAGCAG
CAATGGAAGGTCATTTACCTGTGTTAAAGTACCTAATGAGTCAAGTCCAAACTCCATTGT
ATGTACTTGACACTCCCAATGATCATGGAGAAACTGCTGAAGCTCTAGCCAAACGGTTTT
TGAAAAACGATGTTGAGTCGTATATAAATAAAATCAAAACAGAACAGACATTCCATAGAG
GATCAGAATACTCAGAGATATTGGCGTTTCCAGCACATTCAGCTGCTTATTCTGGAAACT
TAATCCAACTACGTGTTTTAATAGAATCAGGGACCGTAAAGATAGATGAAAGAGATGAAC
AGGGTGCAACACCATTACACAAAGCTGCTGGTCAAGGACACCTTAAGATAATTCAATGGC
TTCGAGAAAACGGTGCTGATCCAAAGTTAAGAAATGAACTGGGTGAATCACCAGCCGATG
TAGCTAGAAGATATGGTCAGTTAGGAGCGCTAAAACTTTTATCATCTAAATCTGATGAAG
AATGTGAGAATGATGAAATTTCAGATATTATAGATTTACCATCTGATATTCCGCTTGGTT
ATACTGAAGGCGAAAAAATGCATCAGCTCATAGTGGATAAAAATGGCGCAATCGGTAGAG
CTAAAATTAGAATTGAAAAATTGGAACGTTTGTTAGAATTGGCTAAATCAGATTATAAGC
AACTGGATGGTCCAATAGATAAAGAAGAAAGACAAAGAATCGATGCCTTGAATGAACTTG
GCCGAAATTACGAAAAACAGATTGAAGAATTGAAAGCAACATTGGAATGTGAACGTATCT
ACCGTGAAAAACTGGAGTCACGTTTAGATGAGTCAAGACGCGAAGTTGCTACATTAACCA
TGAAGCTAAATGAAAGTCATTCCGGTTCCTCTGACAATTACCTTACTAATAAATCAAAAG
TTCAACAAAATTTCGATTATCAAAATAACAAAAAAATCAATAAATTTAATGGAAGTATAA
GTAGTATTGAAAGTAGTAATAGTAATGTATGTATAAAAAATATAAAAACCAATAATAATC
ATAAAAAGTTTAAAACAAAATAAATTATGTAACAAGTTTTTTTCTTGTTTGTGTGTGTAT
ATTACTTAAATATTTATTAAGATTATAAACTGAGTATCTTTACTGGTAATCATGAATTAA
TTTAAATACAATTACAGAATCATATCTTTTTTTAATATAATTCTATT

consensusID : consensus_10774#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 512
fasta sequence 
                              [GTGTGCTTAAAGCCCCTCGGAATTTAAAGAATGGGGACAGGTTGCCAATCTCTTGAGTTGTACCTTTATAAAATATCTAGAACATGACCTCTGCAAGCATGGATGAACAGGTAACAATCCATACTGCAGTGAAACGAGGTGATTTCGCGGCTCTCAAGGAAATGATTTCATGTGGAGCCAGTGTAAATGAAGTAGATAAGCATTCCTTTACACCTTTGCACTGGGCTGCTAACGTAGGTGCGATAGAGGTAACAAACGATGTGGTTTTTGAGTAAGCATCTGATTTCTGCACTAAGATTCTACAATATCTACTGTGGAAGAATGCTGATCCTTTATTGGTGACCAAAAATGGTTGGACGCCCGTTCATATAGCTGCCATCCGAGGCTATGAGAAATGTATACAGTCACTGGTTGACAGAGGTGTAAGTGTCTCCGTTAAAGACAAATACGGTCAAACTCCTGGCCATCTGGCTTCGATACATGGAAATTCCAGCAGTCTTTTAACTCTCCTA]

[+] EMBL CD122656             [GTGTGCTTAAAGCCCCTCGGAATTTAAAGAATGGGGACAGGTTGCCAATCTCTTGAGTTGTACCTTTATAAAATATCTAGAACATGACCTCTGCAAGCATGGATGAACAGGTAACAATCCATACTGCAGTGAAACGAGGTGATTTCGCGGCTCTCAAGGAAATGATTTCATGTGGAGCCAGTGTAAATGAAGTAGATAAGCATTCCTTTACACCTTTGCACTGGGCTGCTAACGTAGGTGCGATAGAGGTAACAAACGATGTGGTTTTTGAGTAAGCATCTGATTTCTGCACTAAGATTCTACAATATCTACTGTGGAAGAATGCTGATCCTTTATTGGTGACCAAAAATGGTTGGACGCCCGTTCATATAGCTGCCATCCGAGGCTATGAGAAATGTATACAGT                                                                                                           ]
[+] EMBL CD122585             [GTGTGCTTAAAGCCCCTCGGAATTTAAAGAATGGGGACAGGTTGCCAATCTCTTGAGTTGTACCTTTATAAAATATCTAGAACATGACCTCTGCAAGCATGGATGAACAGGTAACAATCCATACTGCAGTGAAACGAGGTGATTTCGCGGCTCTCAAGGAAATGATTTCATGTGGAGCCAGTGTAAATGAAGTAGATAAGCATTCCTTTACACCTTTGCACTGGGCTGCTAACGTAGGTGCGATAGAGGTAACAAACGATGTGGTTTTTGAGTAAGCATCTGATTTCTGCACTAAGATTCTACAATATCTACTGTGGAAGAATGCTGATCCTTTATTGGTGACCAAAAATGGTTGGACGCCCGTTCATATAGCTGCCATCCGAGGCTATGAGAAATGTATACAGT                                                                                                           ]
[-] EMBL CD195586             [                                                                                                                                                                                                                            CTGGGCTGCTAACGTAGGTGCGATAGAGGTAACAAACGATGTGGTTTTTGAGTAAGCATCTGATTTCTGCACTAAGATTCTACAATATCTACTGTGGAAGAATGCTGATCCTTTATTGGTGACCAAAAATGGTTGGACGCCCGTTCATATAGCTGCCATCCGAGGCTATGAGAAATGTATACAGTCACTGGTTGACAGAGGTGTAAGTGTCTCCGTTAAAGACAAATACGGTCAAACTCCTGGCCATCTGGCTTCGATACATGGAAATTCCAGCAGTCTTTTAACTCTCCTA]




>consensus_10774#1
GTGTGCTTAAAGCCCCTCGGAATTTAAAGAATGGGGACAGGTTGCCAATCTCTTGAGTTG
TACCTTTATAAAATATCTAGAACATGACCTCTGCAAGCATGGATGAACAGGTAACAATCC
ATACTGCAGTGAAACGAGGTGATTTCGCGGCTCTCAAGGAAATGATTTCATGTGGAGCCA
GTGTAAATGAAGTAGATAAGCATTCCTTTACACCTTTGCACTGGGCTGCTAACGTAGGTG
CGATAGAGGTAACAAACGATGTGGTTTTTGAGTAAGCATCTGATTTCTGCACTAAGATTC
TACAATATCTACTGTGGAAGAATGCTGATCCTTTATTGGTGACCAAAAATGGTTGGACGC
CCGTTCATATAGCTGCCATCCGAGGCTATGAGAAATGTATACAGTCACTGGTTGACAGAG
GTGTAAGTGTCTCCGTTAAAGACAAATACGGTCAAACTCCTGGCCATCTGGCTTCGATAC
ATGGAAATTCCAGCAGTCTTTTAACTCTCCTA

consensusID : consensus_10774#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 375
fasta sequence 
                              [CCCTCGGAATTTAAAGAATGGGGACAGGTTGCCAATCTCTTGAGTTACCTTTATAAAATATCTAAAACATGACCTCTGCAAGCATGGATGAACAGGTAACAATCCATACTGCAGTGAAACGAGGTGATTTCGCGGCTCTCAAGGAAATGATTTCATGTGGAGCCAGTGTAAATGAAGTAGATAAGCATTCCTTTACACCTTTGCACTGGGCTGCTAACGTAGGTGCGATAGAGATTCTACAATATCTACTGTGGAAGAATGCTGATCCTTTATTGGTGACCAAAAATGGTTGGACGCCCGTTCATATAGCTGCCATCCGAGGCTATGAGAAATGTATACAGTCACTGGTTGACAGAGGTGTAAGTGTCTCCGTTA]

[+] EMBL CD126505             [CCCTCGGAATTTAAAGAATGGGGACAGGTTGCCAATCTCTTGAGTTACCTTTATAAAATATCTAAAACATGACCTCTGCAAGCATGGATGAACAGGTAACAATCCATACTGCAGTGAAACGAGGTGATTTCGCGGCTCTCAAGGAAATGATTTCATGTGGAGCCAGTGTAAATGAAGTAGATAAGCATTCCTTTACACCTTTGCACTGGGCTGCTAACGTAGGTGCGATAGAGATTCTACAATATCTACTGTGGAAGAATGCTGATCCTTTATTGGTGACCAAAAATGGTTGGACGCCCGTTCATATAGCTGCCATCCGAGGCTATGAGAAATGTATACAGTCACTGGTTGACAGAGGTGTAAGTGTCTCCGTTA]




>consensus_10774#2
CCCTCGGAATTTAAAGAATGGGGACAGGTTGCCAATCTCTTGAGTTACCTTTATAAAATA
TCTAAAACATGACCTCTGCAAGCATGGATGAACAGGTAACAATCCATACTGCAGTGAAAC
GAGGTGATTTCGCGGCTCTCAAGGAAATGATTTCATGTGGAGCCAGTGTAAATGAAGTAG
ATAAGCATTCCTTTACACCTTTGCACTGGGCTGCTAACGTAGGTGCGATAGAGATTCTAC
AATATCTACTGTGGAAGAATGCTGATCCTTTATTGGTGACCAAAAATGGTTGGACGCCCG
TTCATATAGCTGCCATCCGAGGCTATGAGAAATGTATACAGTCACTGGTTGACAGAGGTG
TAAGTGTCTCCGTTA

consensusID : consensus_10774#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 341
fasta sequence 
                              [ATTCAGTCTCGAGGCAGTTTCCAGCACATTCAGCTGCTTATTCTGGAAACTTAATCCAACTACGTGTTTTAATAGAATCAGGGACCGTAAAGATAGATGAAAGAGATGAACAGGGTGCAACACCATTACACAAAGCTGCTGGTCAAGGACACCTTAAGATAATTCAATGGCTTCGAGAAAACGGTGCTGATCCAAAGTTAAGAAATGAACTGGGTGAATCACCAGCCGATGTAGCTAGAAGATATGGTCAGTTAGGAGCGCTAAAACTTTTATCATCTAAATCTGATGAAGAATGTGAGAATGATGAAATTTCAGATATTATAGANTTACCATCTGATATT]

[+] EMBL CD077934             [ATTCAGTCTCGAGGCAGTTTCCAGCACATTCAGCTGCTTATTCTGGAAACTTAATCCAACTACGTGTTTTAATAGAATCAGGGACCGTAAAGATAGATGAAAGAGATGAACAGGGTGCAACACCATTACACAAAGCTGCTGGTCAAGGACACCTTAAGATAATTCAATGGCTTCGAGAAAACGGTGCTGATCCAAAGTTAAGAAATGAACTGGGTGAATCACCAGCCGATGTAGCTAGAAGATATGGTCAGTTAGGAGCGCTAAAACTTTTATCATCTAAATCTGATGAAGAATGTGAGAATGATGAAATTTCAGATATTATAGANTTACCATCTGATATT]
[+] EMBL CD081220             [                                                                                                     AGAGATGAACAGGGTGCAACACCATTACACAAAGCTGCTGGTCAAGGACACCTTAAGATAATTCAATGGCTTCGAGAAAACGGTGCTGATCCAAAGTTAAGAAATGAACTGGGTGAATCACCAGCCGATGTAGCTAGAAGATATGGTCACTTACGAGCGCTAAAACTTTTATCATCTAA                                                             ]




>consensus_10774#3
ATTCAGTCTCGAGGCAGTTTCCAGCACATTCAGCTGCTTATTCTGGAAACTTAATCCAAC
TACGTGTTTTAATAGAATCAGGGACCGTAAAGATAGATGAAAGAGATGAACAGGGTGCAA
CACCATTACACAAAGCTGCTGGTCAAGGACACCTTAAGATAATTCAATGGCTTCGAGAAA
ACGGTGCTGATCCAAAGTTAAGAAATGAACTGGGTGAATCACCAGCCGATGTAGCTAGAA
GATATGGTCAGTTAGGAGCGCTAAAACTTTTATCATCTAAATCTGATGAAGAATGTGAGA
ATGATGAAATTTCAGATATTATAGANTTACCATCTGATATT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10774#0      CTCGAGGCCAAAATTCGGCACGAGGGGTAACAATCCATACTGCAGTGAAACAAGGTGATT 60
consensus_10774#3      ------------------------------------------------------------
consensus_10774#1      ------------------------------------------------------------
consensus_10774#2      ------------------------------------------------------------
                                                                                   

consensus_10774#0      TCGCGGCTCTCAAGGAAATGATTTCATGTGGAGCCAGTGTAAATGAAGTAGATAAGCATT 120
consensus_10774#3      ------------------------------------------------------------
consensus_10774#1      ------------------------------------------------------------
consensus_10774#2      ------------------------------------------------------------
                                                                                   

consensus_10774#0      CCTTTACACCTTTGCACTGGGCTGCTAACGTAGGTGCGATAGAGATTCTACAATATCTAC 180
consensus_10774#3      ------------------------------------------------------------
consensus_10774#1      ------------------------------------------------------------
consensus_10774#2      ------------------------------------------------------------
                                                                                   

consensus_10774#0      TGTGGAAGAATGCTGATCCTTTATTGGTGACCAAAAATGGTTGGACGCCCGTTCATATAG 240
consensus_10774#3      ------------------------------------------------------------
consensus_10774#1      ------------------------------------------------------------
consensus_10774#2      ------------------------------------------------------------
                                                                                   

consensus_10774#0      CTGCCATCCGAGGCTATGAGAAATGTATACAGTCACTGGTTGACAGAGGTGTAAGTGTCT 300
consensus_10774#3      ------------------------------------------------------------
consensus_10774#1      ------------------------------------------------------------
consensus_10774#2      ------------------------------------------------------------
                                                                                   

consensus_10774#0      CCGTTAAAGACAAATACGGTCAAACTCCTGGCCATCTGGCTTCGATACATGGAAATTCCA 360
consensus_10774#3      ------------------------------------------------------------
consensus_10774#1      ------------------------------------------------------------
consensus_10774#2      ------------------------------------------------------------
                                                                                   

consensus_10774#0      GCAGTCTTTTAACTCTCCTACGTGCTGGTGCTGATCTTGAAACGGTGGATGTTAGTGGAT 420
consensus_10774#3      ------------------------------------------------------------
consensus_10774#1      ------------------------------------------------------------
consensus_10774#2      ------------------------------------------------------------
                                                                                   

consensus_10774#0      GGACAATGTTACATGCAGCTGCGTTTCACGGACGACTGGGATGTGTTCAAGTGTTACTAA 480
consensus_10774#3      ------------------------------------------------------------
consensus_10774#1      ------------------------------------------------------------
consensus_10774#2      ------------------------------------------------------------
                                                                                   

consensus_10774#0      GGTGGGATCTACGAATAGAGGATACGGATAAAGCTGGAAACAATGCTGCTCATCTAGCAG 540
consensus_10774#3      ------------------------------------------------------------
consensus_10774#1      ------------------------------------------------------------
consensus_10774#2      ------------------------------------------------------------
                                                                                   

consensus_10774#0      CAATGGAAGGTCATTTACCTGTGTTAAAGTACCTAATGAGTCAAGTCCAAACTCCATTGT 600
consensus_10774#3      ------------------------------------------------------------
consensus_10774#1      ------------------------------------------------------------
consensus_10774#2      ------------------------------------------------------------
                                                                                   

consensus_10774#0      ATGTACTTGACACTCCCAATGATCATGGAGAAACTGCTGAAGCTCTAGCCAAACGGTTTT 660
consensus_10774#3      ------------------------------------------------------------
consensus_10774#1      ----------------------------------------------GTGTGCTTAAAGCC 14
consensus_10774#2      -----------------------------------------------------------C 1
                                                                                   

consensus_10774#0      TGAAAAACGATGTTGAGTCGTATATAAATAAAATCAAAACAGAACAGACATTCCATAGAG 720
consensus_10774#3      ------------------------------------------------------------
consensus_10774#1      CCTCGGAATTTAAAGAATGGGGACAGGTTGCCAATCTCTTGAGTTGTACCTTTATAAAAT 74
consensus_10774#2      CCTCGGAATTTAAAGAATGGGGACAGGTTGCCAATCTCTTGAGTT--ACCTTTATAAAAT 59
                                                                                   

consensus_10774#0      GATCAGAATACTCAGAGATATTGGCGTTTCCAGCACATTCAGCTGCTTATTCTGGAAACT 780
consensus_10774#3      ---------ATTCAGTCTCGAGGCAGTTTCCAGCACATTCAGCTGCTTATTCTGGAAACT 51
consensus_10774#1      ATCTAGAACATGACCTCTGCAAGCATGGATGAACAGGTAACAATCCATACTGCAGTGAAA 134
consensus_10774#2      ATCTAAAACATGACCTCTGCAAGCATGGATGAACAGGTAACAATCCATACTGCAGTGAAA 119
                                *            *        * **  *     * * ** *   *  *  

consensus_10774#0      TAATCCAACTACGTG--TTTTAATAGAATCAGGGACCGTAAAG-----ATAGATGAAAGA 833
consensus_10774#3      TAATCCAACTACGTG--TTTTAATAGAATCAGGGACCGTAAAG-----ATAGATGAAAGA 104
consensus_10774#1      CGAGGTGATTTCGCGGCTCTCAAGGAAATGATTTCATGTGGAGCCAGTGTAAATGAAGTA 194
consensus_10774#2      CGAGGTGATTTCGCGGCTCTCAAGGAAATGATTTCATGTGGAGCCAGTGTAAATGAAGTA 179
                         *    * * ** *  * * **   *** *      **  **      ** *****  *

consensus_10774#0      GATGAACAGGGTGCAACACCATTACACAAAGCTGCTGGTCAAGGACACCTTAAGATAATT 893
consensus_10774#3      GATGAACAGGGTGCAACACCATTACACAAAGCTGCTGGTCAAGGACACCTTAAGATAATT 164
consensus_10774#1      GATAAGCATTCCTTTACACCTTTGCACTGGGCTGCTAACGTAGGTGCGATAGAGGTAACA 254
consensus_10774#2      GATAAGCATTCCTTTACACCTTTGCACTGGGCTGCTAACGTAGGTGCGATAGAG------ 233
                       *** * **       ***** ** ***   ******     ***     *  **      

consensus_10774#0      CA----ATGGCTTC-GAGAAAACGG-----TGCTGATCCAAAGTT--AAGAAATGAACTG 941
consensus_10774#3      CA----ATGGCTTC-GAGAAAACGG-----TGCTGATCCAAAGTT--AAGAAATGAACTG 212
consensus_10774#1      AACGATGTGGTTTTTGAGTAAGCATCTGATTTCTGCACTAAGATTCTACAATATCTACTG 314
consensus_10774#2      ------------------------------------------ATTCTACAATATCTACTG 251
                                                                  **  *  * **  ****

consensus_10774#0      --GGTGAATCACCAGCCGATGTAGCTAGA-AGATATGGTCAGTTAGGAGCGCTAAAACTT 998
consensus_10774#3      --GGTGAATCACCAGCCGATGTAGCTAGA-AGATATGGTCAGTTAGGAGCGCTAAAACTT 269
consensus_10774#1      TGGAAGAATGCTGATCCTTTATTGGTGACCAAAAATGGTTGG--ACGCCCGTTCATATAG 372
consensus_10774#2      TGGAAGAATGCTGATCCTTTATTGGTGACCAAAAATGGTTGG--ACGCCCGTTCATATAG 309
                         *  ****    * **  * * * *    * * *****  *  * *  ** * * *   

consensus_10774#0      TTATCATCTAAATCTGATGAAGAATGTG-AGAATGATGAAATTTCAGATATTATAGATTT 1057
consensus_10774#3      TTATCATCTAAATCTGATGAAGAATGTG-AGAATGATGAAATTTCAGATATTATAGANTT 328
consensus_10774#1      CTGCCATCCGAGGCT-ATGAGAAATGTATACAGTCACTGGTTGACAGAGGTGTAAGTGTC 431
consensus_10774#2      CTGCCATCCGAGGCT-ATGAGAAATGTATACAGTCACTGGTTGACAGAGGTGTAAGTGTC 368
                        *  ****  *  ** ****  *****  * * * *     *  ****  *   **  * 

consensus_10774#0      ACCATCTGATATTCCGCTTGGTTATACTGAAGGCGAAAAAATGCATCAGCTCATAGTGGA 1117
consensus_10774#3      ACCATCTGATATT----------------------------------------------- 341
consensus_10774#1      TCCGTTAAAGACAAATACGGTCAAACTCCTGGCCATCTGGCTTCGATACATGGAAATTCC 491
consensus_10774#2      TCCGTTA----------------------------------------------------- 375
                        ** *                                                       

consensus_10774#0      TAAAAATGGCGCAATCGGTAGAGCTAAAATTAGAATTGAAAAATTGGAACGTTTGTTAGA 1177
consensus_10774#3      ------------------------------------------------------------
consensus_10774#1      AGCAGTCTTTTAACTCTCCTA--------------------------------------- 512
consensus_10774#2      ------------------------------------------------------------
                                                                                   

consensus_10774#0      ATTGGCTAAATCAGATTATAAGCAACTGGATGGTCCAATAGATAAAGAAGAAAGACAAAG 1237
consensus_10774#3      ------------------------------------------------------------
consensus_10774#1      ------------------------------------------------------------
consensus_10774#2      ------------------------------------------------------------
                                                                                   

consensus_10774#0      AATCGATGCCTTGAATGAACTTGGCCGAAATTACGAAAAACAGATTGAAGAATTGAAAGC 1297
consensus_10774#3      ------------------------------------------------------------
consensus_10774#1      ------------------------------------------------------------
consensus_10774#2      ------------------------------------------------------------
                                                                                   

consensus_10774#0      AACATTGGAATGTGAACGTATCTACCGTGAAAAACTGGAGTCACGTTTAGATGAGTCAAG 1357
consensus_10774#3      ------------------------------------------------------------
consensus_10774#1      ------------------------------------------------------------
consensus_10774#2      ------------------------------------------------------------
                                                                                   

consensus_10774#0      ACGCGAAGTTGCTACATTAACCATGAAGCTAAATGAAAGTCATTCCGGTTCCTCTGACAA 1417
consensus_10774#3      ------------------------------------------------------------
consensus_10774#1      ------------------------------------------------------------
consensus_10774#2      ------------------------------------------------------------
                                                                                   

consensus_10774#0      TTACCTTACTAATAAATCAAAAGTTCAACAAAATTTCGATTATCAAAATAACAAAAAAAT 1477
consensus_10774#3      ------------------------------------------------------------
consensus_10774#1      ------------------------------------------------------------
consensus_10774#2      ------------------------------------------------------------
                                                                                   

consensus_10774#0      CAATAAATTTAATGGAAGTATAAGTAGTATTGAAAGTAGTAATAGTAATGTATGTATAAA 1537
consensus_10774#3      ------------------------------------------------------------
consensus_10774#1      ------------------------------------------------------------
consensus_10774#2      ------------------------------------------------------------
                                                                                   

consensus_10774#0      AAATATAAAAACCAATAATAATCATAAAAAGTTTAAAACAAAATAAATTATGTAACAAGT 1597
consensus_10774#3      ------------------------------------------------------------
consensus_10774#1      ------------------------------------------------------------
consensus_10774#2      ------------------------------------------------------------
                                                                                   

consensus_10774#0      TTTTTTCTTGTTTGTGTGTGTATATTACTTAAATATTTATTAAGATTATAAACTGAGTAT 1657
consensus_10774#3      ------------------------------------------------------------
consensus_10774#1      ------------------------------------------------------------
consensus_10774#2      ------------------------------------------------------------
                                                                                   

consensus_10774#0      CTTTACTGGTAATCATGAATTAATTTAAATACAATTACAGAATCATATCTTTTTTTAATA 1717
consensus_10774#3      ------------------------------------------------------------
consensus_10774#1      ------------------------------------------------------------
consensus_10774#2      ------------------------------------------------------------
                                                                                   

consensus_10774#0      TAATTCTATT 1727
consensus_10774#3      ----------
consensus_10774#1      ----------
consensus_10774#2      ----------


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)