cluster # 10775

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Schistosoma mansoni
cluster # 10775 cluster # 10775 Sequences # 21 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10775#0 length = 2383 sequences # 20

consensus_10775#1 length = 346 sequences # 1

consensusID : consensus_10775#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 20
consensus length = 2383
fasta sequence

                              [TCAAGCGACATACACATATACTTTTATAGATCATCCTGAATTAATGCATAATAAATCGAAATAATCGTTTTAACTCCATAAAAATTGCATAAATGTTTAATATTTTCATTTCATTCTTCTTATTATTTGTATCTTCTTTTTAATTAAACAAAATATGATTGAAACCGTGACTTAGTACAAACACGACATCGACTTATTTCACGTAGTACTTTAGTTTCATCTGGTAAATGATCTGTAATATATTGACTGACTGGTTTTTGAAATTCTGTATTATTACTAACATGACGTAGATAATAAGCTTTTGCATCTGACCAATAATTGCACAAACTCATACCATTATTGCATTCTAACAATGGAGAATAACTGAAATATTCAAGACAGCTGCCGGGCGATGAAAGTTGCTGACCACCACCAGTACTTCCAACACTATGCATTACAAAGCTATATCCATCCCAAAGTCTTGCCCAGCCTTCTGGACAGTTAACTTCTTGAAGTTGATTTGCTTGTGCATGAAAAGCATAAGGTTGTGTTGGTGCTTCACAGACAACACAACGAGCAACTCTTCGATGAACTTCGCTTACATTTAGTGGCATCATTGGAAGAGGTTCCGTAGTAGCTAACCAGTAAGAACGATCAGCTCGAACACCAAGTTGACAAGATCCATCGCGAAGGCATTGGAAAAATGGCATTATACTGAACATACTTAGACATGAACTATGAGAACCTAAATCCATGGTTACTAATTCACCATTTCCATTTGCCATTACAAAACTATATCCGTCTGATATTTTTTGTGAACCTGGAGGACATACAGGTTCAGTGTCAGGATTTTGGAAATGCCTTGTGAACAAGTAGGTGCTCTGCAGCGCTTGTCCAGGAGGACCGCTGAATCCTTCGGGTCCGGGGGGTCCAACATCTCCAGGCATACCTCTTGGACCAATATCACCAGGAATACCCTTTAATCCTGGGTCTCCTTTCGGCCCTGGTTCTCCAGGTTCTCTACCAGTGGGACCGGGCAATCCCATTTCTCCCTTAGCTCCTTTTAATCCCCGCGGTGCCGGCTCCCCAATCATACCTTTTTGTCCAGGTTTTCCTGGTTCACCTTTTTCTCCTTTGACTCCAGGAAGACCAATAACATCTTCTCCAGGTATTCCAGGTATACCTATTGGTCCAGGATCACCAACGTCTCCAATTTCACCTTTCATTCCAACTGTTCCTGGCCAGCCAGTATCTCCTTTATCGCCTCTAGGGCCCAATAAGCCTGGCCTTCCGTCGTCACCTGGTAATCCAACATCCCCTGTAGGACCTGGATCTCCAATCGGACCTCTTGGGCCAATATCTCCTGGTATCCCCGGTTCACCTTTCTCACCTTTAATTCCAGGATAACCTCTTTG-ACCTTTAGCACCAGGTAAGGCCATATCA-CCTGGATCTCCTGCCTCACCTTGTTCACCTTTCGGACCAGTAAGGCCACGAAGCCCAGGATCACCTCGTTGACCTTTGGAACCAGGAATACCTCTTCCAGGTGGACCAGGATCACCAGTTTTACCCACTTTACCTGGTAGCCCTGTTAAACCTTTTTCACCCGGTGGCCCTCTAGGACCTTGTGGACCAGGATCTCCAATAGGACTTTCTTCAGCTGGTAAACACTGACCAGGAGCACCGGGGAAACCCTTAGGTCCGGGTTGTCCTCTTGGTCCAGGATCACCTATAGGTCCGATATCACCGGATTCACCTTTATCTCCCTTTCTACCTGGGTATCCATCGTTTCCAGTGATACCTGGTTCACCCTTATCCCCAGATACTCCAGTCTGACCTTTGTCACCCACCCGACCTGGTAAACCGCGTAAGCCTTTTGGTCCAGCATCACCTGGGAATCCTCTGTCTCCTTTGGGTCCCGGAAGTCCAGGAATGCCTCGTTCTCCCATATCTCCAGGTTCCCCGTCACGGCCAACTATTGTTTCTCCTGGTTCACCACGTTCCCCTTTGATACCCTTCTGACCCTTCCCCCCTGGAAAACCTTTAGGACCTAACAAGCCAGGTGGGCCTTCCTGACCTGGTTTTCCCGGACGGCCTTGCAAACCTGGCACTCCTGGATCGCCCACTATGCCCTTCGGCCCAATCAAACCTGTTACTCCAGGGGAACCTTTAGGTCCAGGTAGTCCAGGGTCTCCAGGCATCCCTGGAAGACCTTTCTCACCGACATCTCCGGTATCACCAACATCTCCAACTACTGCTTGACCATTGGTTCCTTCAAAGCCTTTAGGACCA-GTAGTACCAGGTTTTCCAGTGGAACCTTTTTCTCCAACATCACCCGGAGGACCACGTTCTCCCGTATCACCTTTTTCACCAAATGAGTCTGCACCAGGAATACCCCAGTTACCCT]

[-] EMBL CD084242             [TCAAGCGACATACACATATACTTTTATAGATCATCCTGAATTAATGCATAATAAATCGAAATAATCGTTTTAACTCCATAAAAATTGCATAAATGTTTAATATTTTCATTTCATTCTTCTTATTATTTGTATCTTCTTTTTAATTAAACAAAATATGATTGAAACCGTGACTTAGTACAAACACGACATCGACTTATTTCACGTAGTACTTTAGTTTCATCTGGTAAATGATCTGTAATATATTGACTGACTGGTTTTTGAAATTCTGTATTATTACTAACATGACGTAGATAATAAGCTTTTGCATCTGACCAATAATTGCACAAACTCATACCATTATTGCATTCTAACAATGGAGAATAACTGAAATATTCAAGACAGCTGCCGGGCGATGAAAGTTGCTGACCACCACCAGTACTTCCAACACTATGCATTACAAAGCTATATCCATCCCAAAGTCTTGCCCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD119222             [                                                                                                                                                                                                       CACGTAGTACTTTAGTTTCATCTGGTAAATGATCTGTAATATATTGACTGACTGGTTTTTGAAATTCTGTATTATTACTAACATGACGTAGATAATAAGCTTTTGCATCTGACCAATAATTGCACAAACTCATACCATTATTGCATTCTAACAATGGAGAATAACTGAAATATTCAAGACAGCTGCCGGGCGATGAAAGTTGCTGACCACCACCAGTACTTCCAACACTATGCATTACAAAGCTATATCCATCCCAAAGTCTTGCCCAGCCTTCTGGACAGTTAACTTCTTGAAGTTGATTTGCTTGTGCATGAAAAGCATAAGGTTGTGTCGGTGCTTCACAGACAACACAACGAGCATCTCTTCGATGAACTTCGCTTACATNTAGTGGCATCATTGGAAGAGGTTCCGTAGTAGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD119248             [                                                                                                                                                                                                       CACGTAGTACTTTAGTTTCATCTGGTAAATGATCTGTAATATATTGACTGACTGGTTTTTGAAATTCTGTATTATTACTAACATGACGTAGATCATAAGCTTTTGCATCTGACCAATAATTGCACAAACTCATACCATTATTGCATTCTAACAATGGAGAATAACTGAAATATTCAAGACAGCTGCCGGGCGATGAAAGTTGCTGACCACCACCAGTACTTCCAACACTATGCATTACAAAGCTATATCCATCCCAAAGTCTTGCCCAGCCTTCTGGACAGTTAACTTCTTGAAGTTGATTTGCTTGTGCATGAAAAGCATAAGGTTGTGTTGGTGCTTCACAGACAACACAACGAGCAACTCTTCGATGAACTTCGCTTACATTTAGTGGCATCATTGGAAGAGGTTCCGTAGTAGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD134890             [                                                                                                                                                                                                        ACGTAGTACTTTAGTTTCATCTGGTAAATGATCTGTAATATATTGACTGACTGGTTTTTGAAATTCTGTATTATTACTAACATGACGTAGATAATAAGCTTTTGCATCTGACCAATAATTGCACAAACTCATACCATTATTGCATTCTAACAATGGAGAATAACTGAAATATTCAAGACAGCTGCCGGGCGATGAAAGTTGCTGACCACCACCAGTACTTCCAACACTATGCATTACAAAGCTATATCCATCCCAAAGTCTTGCCCAGCCTTCTGGACAGTTAACTTCTTGAAGTTGATTTGCTTGTGCATGAAAAGCATAAGGTTGTGTTGGTGCTTCACAGACAACACAACGAGCAACTCTTCGATGAACTTCGCTTACATTTAGTGGCATCATTGGAAGAGGTTCCGTAGTAGCTAACCAGTAAGAACGATCAGCTCGAACACCAAGTTGACAAGATCCATCGCGAAGGCATTGGAAAAATGGCATTATACTGAACATAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CD134892             [                                                                                                                                                                                                        ACGTAGTACTTTAGTTTCATCTGGTAAATGATCTGTAATATATTGACTGACTGGTTTTTGAAATTCTGTATTATTACTAACATGACGTAGATAATAAGCTTTTGCATCTGACCAATAATTGCACAAACTCATACCATTATTGCATTCTAACAATGGAGAATAACTGAAATATTCAAGACAGCTGCCGGGCGATGAAAGTTGCTGACCACCACCAGTACTTCCAACACTATGCATTACAAAGCTATATCCATCCCAAAGTCTTGCCCAGCCTTCTGGACAGTTAACTTCTTGAAGTTGATTTGCTTGTGCATGAAAAGCATAAGGTTGTGTTGGTGCTTCACAGACAACACAACGAGCAACTCTTCGATGAACTTCGCTTACATTTAGTGGCATCATTGGAAGAGGTTCCGTAGTAGCTAACCAGTAAGAACGATCAGCTCGAACACCAAGTTGACAAGATCCATCGCGAAGGCATTGGAAAAATGGCATTATACTGAACATAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CD133216             [                                                                                                                                                                                                                                                                                                                                                                                                               TGCTGACCACCACCAGTACTTCCAACACTATGCATTACAAAGCTATATCCATCCCAAAGTCTTGCNCAGCTTTCTGGACAGTTAACTTCTTGAAGTTGATTTGCTTGTGCATGAAAAGCATAAGGTTGTGTTGGTGCTTCACAGACAACACAACGAGCAACTCTTCGATGAACTTCGCTTACATTTAGTGGCATCATTGGAAGAGGTTCCGTAGTAGCTAACCAGTAAGAACGATCAGCTCGAACACCAAGTTGACAAGATCCATCGCGAAGGCATTGGAAAAATGGCATTATACTGAACATACTTAGACATGAACTATGAGAACCTAAATCCATGGTTACTAATTCACCATTTCCATTTGCCATTACAAAACTATATCCGTCTGATATTTTTTGTGAACCTGGAGGACATACAGGTTCAGTGTCAGGATTTTGGAAATGCCTTGTGAACAAGTAGGTGCTCTGCAGCGCTTGTCCAGGAGGACCGCTGAATCCTTCGGGTCCGGGGGGTCCAACATCTCCAGGCATACCTCTTGGACCAATATCACCAGGAATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD168069             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TGCCTTGTGAACAAGTAGGTGCTCTGCAGCGCTTGTCCAGAAGGACCGCTGAATCCTTCGGGTCCGGGGGGTCCAACATCTCCAGGCATACCTCTTGGACCAATATCACCAGGAATACCCTTTAATCCTGGGTCTCCTTTCGGCCCTGGTTCTCCAGGTTCTCTACCAGTGGGACCGGGCAATCCCATTTCTCCCTTAGCTCCTTTTAATCCCCGCGGTGCCGGCTCCCCAATCATACCTTTTTGTCCAGGTTTTCCTGGTTCACCTTTTTCTCCTTTGACTCCCGGAAGACCAATAACATCTTCTCCAGGTATTCCAGGTATACCTATTGGTCCAGGATCACCAACGTCTCCAATTTCACCTTTCATTCCAACTGTTCCTGGCCAGCCAGTATCTCCTTTATCGCCTCTAGGGCCCAATAAGCCTGGCCTTCCGTCGTCACCTGGTAATCCAACATCCCCTGTAGGACCTGGATCTCCAATCGGACCTCTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD070838             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ATCCCCGCGGTGCCGGCTCCCCAGTCATACCTTTTTGTCCAGGTTTTCCTGGTTCACCTTTTTCTCCTTTGACTCCAGGAAGACCAATAACATCTTCTCCAGGTATTCCAGGTATACCTATTGGTCCAGGATCACCAACGTCTCCAATTTCACCTTTCATTCCAACTGTTCCTGGCCAGCCAGTATCTCCTTTATCGCCTCTAGGGCCCAATAAGCCTGGCCTTCCGTCGTCACCTGGTAATCCAACATCCCCTGTAGGACCTGGATCTCCAATCGGACCTCTTGNGCCAATATCTCCTGGTATCCCCGGNTCACCTTTCTCACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD070857             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ATCCCTGCGGTGCCGGCTCCCCAATCATACCTTTTTGTCCAGGTTTTCCTGGTTCACCTTTTTCTCCTTTGACTCCAGGAAGACCAATAACATCTTCTCCAGGTATTCCAGGTATACCTATTGGTCCAGGATCACCAACGTCTCCAATTTCACCTTTCATTCCAACTGTTCCTGGCCAGCCAGTATCTCCTTTATCGCCTCTAGGGCCCAATAAGCCTGGCCTTCCGTCGTCACCTGGTAATCCAACATCCCCTGTAGGACCTGGATCTCCAATCGGACCTCTTGNGCCAATATCTCCTGGTAT CCCGGTTCA CTTTCTCACCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD070741             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ATCCCCGCGGTGCCGGCTCCCCAATCATACCTTTTTGTCCAGGTTTTCCTGGTTCACCTTTTTCTCCTTTGACTCCAGGAAGACCAATAACATCTTCTCCAGGTATTCCAGGTATACCTATTGGTCCAGGATCACCAACGTCTCCAATTTCACCTTTCATTCCAACTGTTCCTGGCCAGCCAGTATCTCCTTTATCGCCTCTAGGGCCCAATAAGCCTGGCCTTCCGTCGTCACCTGGTAATCCAACATCCCCTGTAGGACCTGGATCTCCAATCGGACCTCTTGGGCCAATATCTCCTGGTATCCCCGGTTCACCTTTCTCACCTTTAATTCCAGGATAACCTCTTTG ACCTTTAGCACCAGGTAAGGCCATATCACCCTGGggc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD070883             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ATCCCCGCGGTGCCGGCTCCCCAATCATACCTTTTTGTCCAGGTTTTCCTGGTTCACCTTTTTCTCCTTTGACTCCAGGAAGACCAATAACATCTTCTCCAGGTATTCCAGGTATACCTATTGGTTCAGGATCACCAACGTCTCCAATTTCACCTTTCATTCCAACTGTTCCTGGCCAGCCAGTATCTCCTTTATCGCCTCTAGGGCCCAATAAGCCTGGCCTTCCGTCGTCACCTGGTAATCCAACATCCCCTGTAGGACCTGGATCTCCAATCGGACCTCTTGGGCCAATATCTCCTGGTATCCCCGGTTCACCTTTCTCACCTTTAATT CAGGATAACCTCTTTG ACCTTTAGCACCAGGTAAGGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD070934             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ATCCCCGCGGTGCCGGCTCTCCAGTCATACCTTTTTGTCCAGGTTTTCCTGGTTCACCTTTTTCTCCTTTGACTCCAGGAAGACCAATAACATCTTCTCCAGGTATTCCAGGTATACCTATTGGTCCAGGATCACCAACGTCTCCAATTTCACCTTTCATTCCAACTGTTCCTGGCCAGCCAGTATCTCCTTTATCGCCTCTAGGGCCCAATAAGCCTGGCCTTCCGTCGTCACCTGGTAATCCAACATCCCCTGTAGGACCTGGATCTCCAATCGGACCTCTTGGGCCAATATCTCCTGGTATCCCCGGTTCACCTTTCTCACCTTTAATTCCAGGATAACCTCTTTG ACCTTTAGCACCAGGTAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD070863             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ATCCCCGCGGTGCCGGCTCCCCAATCATACCTTTTTGTCCAGGTTTTCCTGGTTCACCTTTTTCTCCTTTGACTCCAGGAAGACCAATAACATCTTCT CAGGTATTCCAGGTATACCTATTGGTCCAGGATCACCAACGTCTCCAATTTCACCTTTCATTCCAACTGTTCCTGGCCAGCCAGTATCTCCTTTATCGCCTCTAGGGCCCAATAAGCCTGGCCTTCCGTCGTCACCTGGTAATCCAACATCCCCTGTAGGACCTGGATCTCCAATCGGACCTCTTGGGCCAATATCTCCTGGTATCCCCGGTTCACCTTTCTCACCTTTAATTCCAGGATAACCTCTTTGNACC TTAGCACCAGGTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD070830             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TCCCCGCGGTGCCGGCTCCCCAATCATACCTTTTTGTCCAGGTTTTCCTGGTTCACCTTTTTCTCCTTTGACTCCAGGAAGACCAATAACATCTTCTCCAGGTATTCCAGGTATACCTATTGGTCCAGGATCACCAACGTCTCCAATTTCACCTTTCATTCCAACTGTTCCTGGCCAGCCAGTATCTCCTTTATCGCCTCTAGGGCCCAATAAGCCTGGCCTTCCGTCGTCACCTGGTAATCCAACATCCCCTGTAGGACCTGGATCTCCAATCGGACCTCTTGNGCCAATATCTCCTGGTATCCCCGGTTCACCTg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD067721             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CAGGTATACCTATTGGTCCAGGATCACCAACGTCTCCAATTTCACCTTTCATTCCAACTGTTCCTGGCCAGCCAGTATCTCCTTTATCGCCTCTAGGGCCCAATAAGCCTGGCCTTCCGTCGTCACCTGGTAATCCAACATCCCCTGTAGGACCTGGATCTCCAATCGGACCTCTTGGGCCAATATCTCCTGGTATCCCCGGTTCACCTTTCTCACCTTTAATTCCAGGATAACCTCTTTG ACCTTTAGCACCAGGTAAGGCCACATCA CCTGGATCTCCTGCCTCACCTTGTTCACCTTTCGGACCAGTAAGGCCACGAAGCCCAGGATCACCTCGTTGACCTTTGGAACCAGGAATACCTCTTCCAGGTGGACCAGGATCACCAGTTTTACCCACTTTACCTGGTAGCCCTGTTAAACCTTTTTCACCCGGTGGCCCTCTAGGACCTTGTGGACCAGGATCTCCAATAGGACTTTCTTCAGCTGGTAAACACTGACCAGGAGCACCGGGGAAACCCTTAGGTCCGGGTTGTCCTCTTGGTCCAGGATCACCTATAGGTCCGATATCACCGGATTCACCTTTATCTCCCTTTCTACCTGGGTATCCATCGTTTCCAGTGATACCTGGTTCACCCTTATCCCCAGGTACTCCAGTCTGACCTTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD112870             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GGCCCAATAAGCCTGGCCTTCCGTCGTCACCTGGTAATCCAACATCCCCTGTAGGACCTGGATCTCCAATCGGACCTCTTGGGCCAATATCTCCTGGTATCCCCGGTTCACCTTTCTCACCTTTAATTCCAGGATAACCTCTTTG ACCTTTAGCACCAGGTAAGGCCATATCA CCTGGATCTCCTGCCTCACCTTGTTCACCTTTCGGACCAGTAAGGCCACGAAGCCCAGGATCACCTCGTTGACCTTTGGAACCAGGAATACCTCTTCCAGGTGGACCAGGATCACCAGTTTTACCCACTTTACCTGGTAGCCCTGTTAAACCTTTTTCACCCGGTGGCCCTCTAGGACCTTGTGGACCAGGATCTCCAATAGGACTTTCTTCAGCTGGTAAACACTGACCAGGAGCACCGGGGAAACCCTTAGGTCCGGGTTGTCCTCTTGGTCCAGGATCACCTATAGGTCCGATATCACCGGATTCACCTTTATCTCCCTTTCTACCTGGGTATCCATCGTTTCCAGTGATACCTGGTTCACCCTTATCCCCAGATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CD068742             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TAGGACCTTGTGGACCAGGATCTCCAATGGGACTTTCTTCAGCTGGTAAACACTGACCAGGAGCACCGGGGAAACCCTTAGGTCCGGGTTGTCCTCTTGGTCCAGGATCACCTATAGGTCCGATATCACCGGATTCACCTTTATCTCCCTTTCTACCTGGGTATCCATCGTTTCCAGTGATACCTGGTTCACCCTTATCCCCAGATACTCCAGTCTGACCTTTGTCACCCACCCGACCTGGTAAACCGCGTAAGCCTTTTGGTCCAGCATCACCTGGGAATCCTCTGTCTCCTTTGGGTCCCGGAAGTCCAGGAATGCCTCGTTCTCCCATATCTCCAGGTTCCCCGTCACGGCCAACTATTGTTTCTCCTGGTTCACCACGTTCCCCTTTGATACCCTTCTGACCCTTCCCCCCTGGAAAACCTTTAGGACCTAAC                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD146586             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GCGTAAGCCTTTTGGTCCAGCATCACCTGGGAATCCTCTGTCTCCTTTGGGTCCCGGAAGTCCAGGAATGCCTCGTTCTCCCATATCTCCAGGTTCCCCGTCACGGCCAACTATTGTTTCTCCTGGTTCACCACGTTCCCCTTTGATACCCTTCTGACCCTTCCCCCCTGGAAAACCTTTAGGACCTAACAAGCCAGGTGGGCCTTCCTGACCTGGTTTTCCCGGACGGCCTTGCAAACCTGGCACTCCTGGATCGCCCACTATGCCCTTCGGCCCAATCAAACCTGTTACTCCAGGGGAACCTTTAGGTCCAGGTAGTCCAGGGTCTCCAGGCATCCCTGGAAGACCTTTCTCACCGACATCTCCGGTATCACCAccca                                                                                                                                                                   ]
[+] EMBL CD189185             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   tACCACGTTCCCCTTTGATACCCTTCTGACCCTTCCCCCCTGGAAAACCTTTAGGACCTAACAAGCCAGGTGGGCCTTCCTGACCTGGTTTTCCCGGACGGCCTTGCAAACCTGGCACTCCTGGATCGCCCACTATGCCCTTCGGCCCAATCAAACCTGTTACTCCAGGGGAACCTTTAGGTCCAGGTAGTCCAGGGTCTCCAGGCATCCCAGGAAGACCTTTCTCACCGACATCTCCGGTATCACCAACATCTCCAACTACTGCTTGACCATTGGTTCCTTCAAAGCCTTTAGGACCA GTAGT                                                                                                              ]
[+] EMBL CD096738             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TTCCCCCCTGGAAAACCTTTAGGACCTAACAAGCCAGGTGGGCCTTCCTGACCTGGTTTTCCCGGACGGCCTTGCAAACCTGGCACTCCTGGATCGCCCACTATGCCCTTCGGCCCAATCAAACCTGTTACTCCAGGGGAACCTTTAGGTCCAGGTAGTCCAGGGTCTCCAGGCATCCCTGGAAGACCTTTCTCACCGACATCTCCGGTATCACCAACATCTCCAACTACTGCTTGACCATTGGTTCCTGCATCACCTGGAGGTCCACGCA AACCAGGTTTTCCAGTGGAACCTTTTTCTCCAACATCACCCGGAGGACCACGTTCTCCCGTATCACCTTTTTCACCAAATGAGTCTGCACCAGGAATACCCCAGTTACCCT]




>consensus_10775#0
TCAAGCGACATACACATATACTTTTATAGATCATCCTGAATTAATGCATAATAAATCGAA
ATAATCGTTTTAACTCCATAAAAATTGCATAAATGTTTAATATTTTCATTTCATTCTTCT
TATTATTTGTATCTTCTTTTTAATTAAACAAAATATGATTGAAACCGTGACTTAGTACAA
ACACGACATCGACTTATTTCACGTAGTACTTTAGTTTCATCTGGTAAATGATCTGTAATA
TATTGACTGACTGGTTTTTGAAATTCTGTATTATTACTAACATGACGTAGATAATAAGCT
TTTGCATCTGACCAATAATTGCACAAACTCATACCATTATTGCATTCTAACAATGGAGAA
TAACTGAAATATTCAAGACAGCTGCCGGGCGATGAAAGTTGCTGACCACCACCAGTACTT
CCAACACTATGCATTACAAAGCTATATCCATCCCAAAGTCTTGCCCAGCCTTCTGGACAG
TTAACTTCTTGAAGTTGATTTGCTTGTGCATGAAAAGCATAAGGTTGTGTTGGTGCTTCA
CAGACAACACAACGAGCAACTCTTCGATGAACTTCGCTTACATTTAGTGGCATCATTGGA
AGAGGTTCCGTAGTAGCTAACCAGTAAGAACGATCAGCTCGAACACCAAGTTGACAAGAT
CCATCGCGAAGGCATTGGAAAAATGGCATTATACTGAACATACTTAGACATGAACTATGA
GAACCTAAATCCATGGTTACTAATTCACCATTTCCATTTGCCATTACAAAACTATATCCG
TCTGATATTTTTTGTGAACCTGGAGGACATACAGGTTCAGTGTCAGGATTTTGGAAATGC
CTTGTGAACAAGTAGGTGCTCTGCAGCGCTTGTCCAGGAGGACCGCTGAATCCTTCGGGT
CCGGGGGGTCCAACATCTCCAGGCATACCTCTTGGACCAATATCACCAGGAATACCCTTT
AATCCTGGGTCTCCTTTCGGCCCTGGTTCTCCAGGTTCTCTACCAGTGGGACCGGGCAAT
CCCATTTCTCCCTTAGCTCCTTTTAATCCCCGCGGTGCCGGCTCCCCAATCATACCTTTT
TGTCCAGGTTTTCCTGGTTCACCTTTTTCTCCTTTGACTCCAGGAAGACCAATAACATCT
TCTCCAGGTATTCCAGGTATACCTATTGGTCCAGGATCACCAACGTCTCCAATTTCACCT
TTCATTCCAACTGTTCCTGGCCAGCCAGTATCTCCTTTATCGCCTCTAGGGCCCAATAAG
CCTGGCCTTCCGTCGTCACCTGGTAATCCAACATCCCCTGTAGGACCTGGATCTCCAATC
GGACCTCTTGGGCCAATATCTCCTGGTATCCCCGGTTCACCTTTCTCACCTTTAATTCCA
GGATAACCTCTTTGACCTTTAGCACCAGGTAAGGCCATATCACCTGGATCTCCTGCCTCA
CCTTGTTCACCTTTCGGACCAGTAAGGCCACGAAGCCCAGGATCACCTCGTTGACCTTTG
GAACCAGGAATACCTCTTCCAGGTGGACCAGGATCACCAGTTTTACCCACTTTACCTGGT
AGCCCTGTTAAACCTTTTTCACCCGGTGGCCCTCTAGGACCTTGTGGACCAGGATCTCCA
ATAGGACTTTCTTCAGCTGGTAAACACTGACCAGGAGCACCGGGGAAACCCTTAGGTCCG
GGTTGTCCTCTTGGTCCAGGATCACCTATAGGTCCGATATCACCGGATTCACCTTTATCT
CCCTTTCTACCTGGGTATCCATCGTTTCCAGTGATACCTGGTTCACCCTTATCCCCAGAT
ACTCCAGTCTGACCTTTGTCACCCACCCGACCTGGTAAACCGCGTAAGCCTTTTGGTCCA
GCATCACCTGGGAATCCTCTGTCTCCTTTGGGTCCCGGAAGTCCAGGAATGCCTCGTTCT
CCCATATCTCCAGGTTCCCCGTCACGGCCAACTATTGTTTCTCCTGGTTCACCACGTTCC
CCTTTGATACCCTTCTGACCCTTCCCCCCTGGAAAACCTTTAGGACCTAACAAGCCAGGT
GGGCCTTCCTGACCTGGTTTTCCCGGACGGCCTTGCAAACCTGGCACTCCTGGATCGCCC
ACTATGCCCTTCGGCCCAATCAAACCTGTTACTCCAGGGGAACCTTTAGGTCCAGGTAGT
CCAGGGTCTCCAGGCATCCCTGGAAGACCTTTCTCACCGACATCTCCGGTATCACCAACA
TCTCCAACTACTGCTTGACCATTGGTTCCTTCAAAGCCTTTAGGACCAGTAGTACCAGGT
TTTCCAGTGGAACCTTTTTCTCCAACATCACCCGGAGGACCACGTTCTCCCGTATCACCT
TTTTCACCAAATGAGTCTGCACCAGGAATACCCCAGTTACCCT

consensusID : consensus_10775#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 346
fasta sequence

                              [CTGCACCAGGAATACCAGGTTCACCCTTTGGACCCGGTTGACCTGGTGCAGACTCATTTGGTGAAAAAGGTTCCCCTGGGTAACAGGGGAACCTTTAGGTCCAGGTAGTCCAGGGTCTCCAGGCATCCCTGGAAGACCTTTCTCACCGACATCTCCGGTATCACCAACATCTCCAACTACTGCTTGACCATTGGTTCCTGCATCACCTGGAGGTCCACGCAAACCAGGTTTTCCAGTGGAACCTTTTTCTCCAACATCACCCGGAGGACCACGTTCTCCCGTATCACCTTTTTCACCAAATGAGTCTGCACCAGGAATACCAGGTTCACCCTTTGGACCCGGTTGA]

[-] EMBL CD190258             [CTGCACCAGGAATACCAGGTTCACCCTTTGGACCCGGTTGACCTGGTGCAGACTCATTTGGTGAAAAAGGTTCCCCTGGGTAACAGGGGAACCTTTAGGTCCAGGTAGTCCAGGGTCTCCAGGCATCCCTGGAAGACCTTTCTCACCGACATCTCCGGTATCACCAACATCTCCAACTACTGCTTGACCATTGGTTCCTGCATCACCTGGAGGTCCACGCAAACCAGGTTTTCCAGTGGAACCTTTTTCTCCAACATCACCCGGAGGACCACGTTCTCCCGTATCACCTTTTTCACCAAATGAGTCTGCACCAGGAATACCAGGTTCACCCTTTGGACCCGGTTGA]




>consensus_10775#1
CTGCACCAGGAATACCAGGTTCACCCTTTGGACCCGGTTGACCTGGTGCAGACTCATTTG
GTGAAAAAGGTTCCCCTGGGTAACAGGGGAACCTTTAGGTCCAGGTAGTCCAGGGTCTCC
AGGCATCCCTGGAAGACCTTTCTCACCGACATCTCCGGTATCACCAACATCTCCAACTAC
TGCTTGACCATTGGTTCCTGCATCACCTGGAGGTCCACGCAAACCAGGTTTTCCAGTGGA
ACCTTTTTCTCCAACATCACCCGGAGGACCACGTTCTCCCGTATCACCTTTTTCACCAAA
TGAGTCTGCACCAGGAATACCAGGTTCACCCTTTGGACCCGGTTGA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10775#0      TCAAGCGACATACACATATACTTTTATAGATCATCCTGAATTAATGCATAATAAATCGAA 60
consensus_10775#1      ------------------------------------------------------------
                                                                                   

consensus_10775#0      ATAATCGTTTTAACTCCATAAAAATTGCATAAATGTTTAATATTTTCATTTCATTCTTCT 120
consensus_10775#1      ------------------------------------------------------------
                                                                                   

consensus_10775#0      TATTATTTGTATCTTCTTTTTAATTAAACAAAATATGATTGAAACCGTGACTTAGTACAA 180
consensus_10775#1      ------------------------------------------------------------
                                                                                   

consensus_10775#0      ACACGACATCGACTTATTTCACGTAGTACTTTAGTTTCATCTGGTAAATGATCTGTAATA 240
consensus_10775#1      ------------------------------------------------------------
                                                                                   

consensus_10775#0      TATTGACTGACTGGTTTTTGAAATTCTGTATTATTACTAACATGACGTAGATAATAAGCT 300
consensus_10775#1      ------------------------------------------------------------
                                                                                   

consensus_10775#0      TTTGCATCTGACCAATAATTGCACAAACTCATACCATTATTGCATTCTAACAATGGAGAA 360
consensus_10775#1      ------------------------------------------------------------
                                                                                   

consensus_10775#0      TAACTGAAATATTCAAGACAGCTGCCGGGCGATGAAAGTTGCTGACCACCACCAGTACTT 420
consensus_10775#1      ------------------------------------------------------------
                                                                                   

consensus_10775#0      CCAACACTATGCATTACAAAGCTATATCCATCCCAAAGTCTTGCCCAGCCTTCTGGACAG 480
consensus_10775#1      ------------------------------------------------------------
                                                                                   

consensus_10775#0      TTAACTTCTTGAAGTTGATTTGCTTGTGCATGAAAAGCATAAGGTTGTGTTGGTGCTTCA 540
consensus_10775#1      ------------------------------------------------------------
                                                                                   

consensus_10775#0      CAGACAACACAACGAGCAACTCTTCGATGAACTTCGCTTACATTTAGTGGCATCATTGGA 600
consensus_10775#1      ------------------------------------------------------------
                                                                                   

consensus_10775#0      AGAGGTTCCGTAGTAGCTAACCAGTAAGAACGATCAGCTCGAACACCAAGTTGACAAGAT 660
consensus_10775#1      ------------------------------------------------------------
                                                                                   

consensus_10775#0      CCATCGCGAAGGCATTGGAAAAATGGCATTATACTGAACATACTTAGACATGAACTATGA 720
consensus_10775#1      ------------------------------------------------------------
                                                                                   

consensus_10775#0      GAACCTAAATCCATGGTTACTAATTCACCATTTCCATTTGCCATTACAAAACTATATCCG 780
consensus_10775#1      ------------------------------------------------------------
                                                                                   

consensus_10775#0      TCTGATATTTTTTGTGAACCTGGAGGACATACAGGTTCAGTGTCAGGATTTTGGAAATGC 840
consensus_10775#1      ------------------------------------------------------------
                                                                                   

consensus_10775#0      CTTGTGAACAAGTAGGTGCTCTGCAGCGCTTGTCCAGGAGGACCGCTGAATCCTTCGGGT 900
consensus_10775#1      ------------------------------------------------------------
                                                                                   

consensus_10775#0      CCGGGGGGTCCAACATCTCCAGGCATACCTCTTGGACCAATATCACCAGGAATACCCTTT 960
consensus_10775#1      ------------------------------------------------------------
                                                                                   

consensus_10775#0      AATCCTGGGTCTCCTTTCGGCCCTGGTTCTCCAGGTTCTCTACCAGTGGGACCGGGCAAT 1020
consensus_10775#1      ------------------------------------------------------------
                                                                                   

consensus_10775#0      CCCATTTCTCCCTTAGCTCCTTTTAATCCCCGCGGTGCCGGCTCCCCAATCATACCTTTT 1080
consensus_10775#1      ------------------------------------------------------------
                                                                                   

consensus_10775#0      TGTCCAGGTTTTCCTGGTTCACCTTTTTCTCCTTTGACTCCAGGAAGACCAATAACATCT 1140
consensus_10775#1      ------------------------------------------------------------
                                                                                   

consensus_10775#0      TCTCCAGGTATTCCAGGTATACCTATTGGTCCAGGATCACCAACGTCTCCAATTTCACCT 1200
consensus_10775#1      ------------------------------------------------------------
                                                                                   

consensus_10775#0      TTCATTCCAACTGTTCCTGGCCAGCCAGTATCTCCTTTATCGCCTCTAGGGCCCAATAAG 1260
consensus_10775#1      ------------------------------------------------------------
                                                                                   

consensus_10775#0      CCTGGCCTTCCGTCGTCACCTGGTAATCCAACATCCCCTGTAGGACCTGGATCTCCAATC 1320
consensus_10775#1      ------------------------------------------------------------
                                                                                   

consensus_10775#0      GGACCTCTTGGGCCAATATCTCCTGGTATCCCCGGTTCACCTTTCTCACCTTTAATTCCA 1380
consensus_10775#1      ------------------------------------------------------------
                                                                                   

consensus_10775#0      GGATAACCTCTTTGACCTTTAGCACCAGGTAAGGCCATATCACCTGGATCTCCTGCCTCA 1440
consensus_10775#1      ------------------------------------------------------------
                                                                                   

consensus_10775#0      CCTTGTTCACCTTTCGGACCAGTAAGGCCACGAAGCCCAGGATCACCTCGTTGACCTTTG 1500
consensus_10775#1      ------------------------------------------------------------
                                                                                   

consensus_10775#0      GAACCAGGAATACCTCTTCCAGGTGGACCAGGATCACCAGTTTTACCCACTTTACCTGGT 1560
consensus_10775#1      ------------------------------------------------------------
                                                                                   

consensus_10775#0      AGCCCTGTTAAACCTTTTTCACCCGGTGGCCCTCTAGGACCTTGTGGACCAGGATCTCCA 1620
consensus_10775#1      ------------------------------------------------------------
                                                                                   

consensus_10775#0      ATAGGACTTTCTTCAGCTGGTAAACACTGACCAGGAGCACCGGGGAAACCCTTAGGTCCG 1680
consensus_10775#1      ------------------------------------------------------------
                                                                                   

consensus_10775#0      GGTTGTCCTCTTGGTCCAGGATCACCTATAGGTCCGATATCACCGGATTCACCTTTATCT 1740
consensus_10775#1      ------------------------------------------------------------
                                                                                   

consensus_10775#0      CCCTTTCTACCTGGGTATCCATCGTTTCCAGTGATACCTGGTTCACCCTTATCCCCAGAT 1800
consensus_10775#1      ------------------------------------------------------------
                                                                                   

consensus_10775#0      ACTCCAGTCTGACCTTTGTCACCCACCCGACCTGGTAAACCGCGTAAGCCTTTTGGTCCA 1860
consensus_10775#1      ------------------------------------------------------------
                                                                                   

consensus_10775#0      GCATCACCTGGGAATCCTCTGTCTCCTTTGGGTCCCGGAAGTCCAGGAATGCCTCGTTCT 1920
consensus_10775#1      ------------------------------------------------------------
                                                                                   

consensus_10775#0      CCCATATCTCCAGGTTCCCCGTCACGGCCAACTATTGTTTCTCCTGGTTCACCACGTTCC 1980
consensus_10775#1      ------------------------------------------------------------
                                                                                   

consensus_10775#0      CCTTTGATACCCTTCTGACCCTTCCCCCCTGGAAAACCTTTAGGACCTAACAAGCCAGGT 2040
consensus_10775#1      ------------------------------------------------------------
                                                                                   

consensus_10775#0      GGGCCTTCCTGACCTGGTTTTCCCGGACGGCCTTGCAAACCTGGCACTCCTGGATCGCCC 2100
consensus_10775#1      -------CTGCACCAGGAATACCAGGTTCACCCTTTGGACCCGGTTGACCTGG--TGCAG 51
                              *   *** **  * ** **    ** *    *** **    *****   **  

consensus_10775#0      ACTATGCCCTTCGGCCCAATCAAACCTGTTACTC--CAGGGGAACCTTTAGGTCCAGGTA 2158
consensus_10775#1      ACT----CATTTGGTGAAAAAGGTTCCCCTGGGTAACAGGGGAACCTTTAGGTCCAGGTA 107
                       ***    * ** **   **      *   *      ************************

consensus_10775#0      GTCCAGGGTCTCCAGGCATCCCTGGAAGACCTTTCTCACCGACATCTCCGGTATCACCAA 2218
consensus_10775#1      GTCCAGGGTCTCCAGGCATCCCTGGAAGACCTTTCTCACCGACATCTCCGGTATCACCAA 167
                       ************************************************************

consensus_10775#0      CATCTCCAACTACTGCTTGACCATTGGTTCCTTCAAAGCCTTTAGGACCAGTAGTACCAG 2278
consensus_10775#1      CATCTCCAACTACTGCTTGACCATTGGTTCCTGCATCACCTGGAGGTCCACGCAAACCAG 227
                       ******************************** **   ***  *** ***     *****

consensus_10775#0      GTTTTCCAGTGGAACCTTTTTCTCCAACATCACCCGGAGGACCACGTTCTCCCGTATCAC 2338
consensus_10775#1      GTTTTCCAGTGGAACCTTTTTCTCCAACATCACCCGGAGGACCACGTTCTCCCGTATCAC 287
                       ************************************************************

consensus_10775#0      CTTTTTCACCAAATGAGTCTGCACCAGGAATACCCCAGTTACCCT-------------- 2383
consensus_10775#1      CTTTTTCACCAAATGAGTCTGCACCAGGAATACCAGGTTCACCCTTTGGACCCGGTTGA 346
                       **********************************    * *****