cluster # 10779

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Schistosoma mansoni
cluster # 10779 cluster # 10779 Sequences # 22 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10779#0 length = 1833 sequences # 21

consensus_10779#1 length = 468 sequences # 1

consensusID : consensus_10779#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 21
consensus length = 1833
fasta sequence

                              [AGCTGTTCAGGCATCTATACGACTTACTGAAGATGTTAATAGTAATCATCATCACCATGAAATACGTCGAAAACAAGCCCAACGTATCTCTTCACGTAAAAAGTGTTATAACTCTTCCTCACCATCCTCTGCATCTGGACCTGATGTGGATGATGACAATAATAAGAGTAAGCTAGATCGTGTAATGAATGTGTTCTATCAAAATGATAATTCACCAGCCCATTTAAATTGTAAATCAGATTC-AATCGATAAAATATCATCCTCATCTTCTGCTGACAATCAACGTGTTGTAAATCATCAAAATAAAAAAGAAACTTCAAAATCAACTGTTCCAAGACTACCACATACAAAACAACTCATAGATGAATACAATGAATTTATAGCTGAAGAGTGTGTCACTTCACAAGAACTCTTGGAAACGGCTAACCATAAATCAATCTCATCTTCACTGATTCCATCTAGTGAATTGGATAAGTCCATTAAGTATCCACATCAATCCCTTGATACAGTTAGTAACAGTGAATTATTCGATTGGCCTGAAAC-TATTCAAACTTGTCCCAACCAAATTGCGAGGATGCATCATTATGTCACTAATGATCAATATCCATTGAC-AATTTATCCTCTATGGAGCGGAGCTGTTACTGAGTTGGCCACATATTGGGACCAAACGTTGTTACATTCAGATGAAATGTTATATTCAAGTGATTCACCTGATGAGGCAATGAATCGTTTATCCGAAGAAACGCATACATTTGCACAATCATTTATGACTGAACCAACTGATCCATCATCTTTTCATTCACAATTTATATCATCTCAATTCGAAACAACCCATTTTATTCAGCCAACTGGAATTTATGAGAATGGATTGAAAGATTATTTCAGTCAGGATAAATTTATCCTAAATAATAATATTTATTCAGGTATTTGGAATACTATGAAGGAGAACGACAATAATCAAAGTTATCTGTCTACTGAAAACTCACCTGAATATCTGTCTTCAGATCATCTTGTTGGACAGGGTTTTCTACAGTCTGATCATTTTTGTGATTACCATATAAACAAAATTACAGTTGAAAATGCTTTTAACACTACTTTACCAATTATCTATTCACTAATTCAATGTAATGATGATAGAAAAAAATAGTTCTACCGCATTGCAATCATCTTCAATAAATTTTCCTACAAATACAGACGAATTGGACCGAATAGATACTCCTCTAATCACTCAGATATTTCTCGATGCTTTGCGTACAGCACATCGTCAAATTGTTGATGAAATCAATCCATCTTATCATTATACTAATTCCATTGTTAATTCGTCATCTGAAAATACTACTCCTGATTACTATACAAATGATGACGATAATAACACAATGCGAATTGATTGCAATCCACATGATAGTTGTCGAACTAGTTTTTGTGAATTATCACGAATTACTGAAAGTAGACGTTTATCTGTATTAAACTATGAAGCCGAAATGAACAGTTCTATTGAAGAAAAGATGGAAATAAAAGAAGAGTATTTCGATTTAGTACCAAATCCTTTGAAGAACGGAGTTAGTAACGACCAAATATCATCCGAAGAATTGTGTGGTTATTCTTCATGGAAATGTATTGTAGACATACCACAATCGGAATTGTTTCAAGAATTAGGATTATCGGAAACCACATCTGAACAATCTAATTNTGTATCAACTGGTTTTATGAATTATGAGAATATTTTCAACGAATCATCTGCTATTGCCCCATGGACATATATTTTCGAAAAAGTAATCAGAAGAATAAATGGTGTCGACAATAATCAGGATTCTTCGTTAAATTGTGAAAATA]

[+] EMBL CD181489             [AGCTGTTCAGGCATCTATACGACTTACTGAAGATGTTAATAGTAATCATCATCACCATGAAATACGTCGAAAACAAGCCCAACGTATCTCTTCACGTAAAAAGTGTTATAACTCTTCCTCACCATCCTCTGCATCTGGACCTGATGTGGATGATGACAATAATAAGAGTAAGCTAGATCGTGTAATGAATGTGTTCTATCAAAATGATAATTCACCAGCCCATTTAAATTGTAAATCAGATTC AATCGATAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD181258             [AGCTGTTCAGGCATCTATACGACTTACTGAAGATGTTAATAGTAATCATCATCACCATGAAATACGTCGAAAACAAGCCCAACGTATCTCTTCACGTAAAAAGTGTTATAACTCTTCCTCACCATCCTCTGCATCTGGACCTGATGTGGATGATGACAATAATAAGAGTAAGCTAGATCGTGTAATGAATGTGTTCTATCAAAATGATAATTCACCAGCCCATTTAAATTGTAAATCAGATTCAAATCGATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD091134             [                                                                                         CTTCACGTAAAAAGTGTTATAACTCTTCCTCACCATCCTCTGCATCTGGACCTGATGTGGATGATGACAATAATAAGAGTAAGCTAGATCGTGTAATGAATGTGTTCTATCAAAATGATAATTCACCAGCCCATTTAAATTGTAAATCAGATTC AATCGATAAAATATCATCCTCATCTTCTGCTGACAATCAACGTGTTGTAAATCATCAAAATAAAAAAGAAACTTCAAAATCAACTGTTCCAAGACTACCACATACAAAACAACTCATAGATGAATACAATGAATTTATAGCTGAAGAGTGTGTCACTTCACAAGAACTCTTGGAAACGGCTAACCATAAATCAATCTCATCTTCACTGATTCCATCTAGTGAATTGGATAAGTCCATTAAGTATCCACATCAATCCCTTGATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD091164             [                                                                                         CTTCACGTAAAAAGTGTTATAACTCTTCCTCACCATCCTCTGCATCTGGACCTGATGTGGATGATGACAATAATAAGAGTAAGCTAGATCGTGTAATGAATGTGTTCTATCAAAATGATAATTCACCAGCCCATTTAAATTGTAAATCAGATTC AATCGATAAAATATCATCCTCATCTTCTGCTGACAATCAACGTGTTGTAAATCATCAAAATAAAAAAGAAACTTCAAAATCAACTGTTCCAAGACTACCACATACAAAACAACTCATAGATTAATACCATGAATTTATAGCTGAAGAGTGTGTCACTTCACAAGAACTCTTGGAAACGGCTAACCATAAATCAATCTCATCTTCACTGATTCCATCTAGTGAATTGGATAAGTCCATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD149042             [                                                                                                TAAAAAGTGTTATAACTCTTCCTCACCATCCTCTGCATCTGGACCTGATGTGGATGATGACAATAATAAGAGTAAGCTAGATCGTGTAATGAATGTGTTCTATCAAAATGATAATTCACCAGCCCATTTAAATTGTAAATCAGATTC AATCGATAAAATATCATCCTCATCTTCTGCTGACAATCAACGTGTTGTAAATCATCAAAATAAAAAAGAAACTTCAAAATCAACTGTTCCAAGACTACCACATACAAAACAACTCATAGATGAATACAATGAATTTATAGCTGAAGAGTGTGTCACTTCACAAGAACTCTTGGAAACGGCTAACCATAAATCAATCTCATCTTCACTGATTCCATCTAGTGAATTGGATAAGTCCATTAAGTATCCACATCAATCCCTTGATACAGTTAGTAACAGTGAATTATTCGATTGGCCTGAAAC TATTCAAACTTGTCCCAACCAAATTGCGAGGATGCATCATTATGTCACTAAATATCAATATCCATTGAC AATTTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD091176             [                                                                                                                                                                                                                                                                                                                                                                                                                                                  TCAATGTCATCTACACTGATTCCATCTAGTGAATTGGATAAGTCCATTAAGTATCCACATCAATCCCTTGATACAGTTAGTAACAGTGAATTATTCGATTGGCCTGAAAC TATTCAAACTTGTCCCAACCAAATTGCGAGGATGCATCATTATGTCACTAATGATCAATATCCATTGAC AATTTATCCTCTATGGAGCGGAGCTGTTACTGAGTTGGCCACATATTGGGACCAAACGTTGTTACATTCAGATGAAATGTTATATTCAAGTGATTCACCTGATGAGGCAATGAATCGTTTATCCGAAGAAACGCATACATTTGCACAATCATTTATGACTGAACCAACTGATCCATCATCTTTTCATTCACAATTTATATCATCTCAATTCGAAACAACCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD091135             [                                                                                                                                                                                                                                                                                                                                                                                                                                                         CATCTTCACTGATTCCATCTAGTGAATTGGATAAGTCCATTAAGTATCCACATCAATCCCTTGATACAGTTAGTAACAGTGAATTATTCGATTGGCCTGAAAC TATTCAAACTTGTCCCAACCAAATTGCGAGGATGCATCATTATGTCACTAATGATCAATATCCATTGAC AATTTATCCTCTATGGAGCGGAGCTGTTACTGAGTTGGCCACATATTGGGACCAAACGTTGTTACATTCAGATGAAATGTTATATTCAAGTGATTCACCTGATGAGGCAATGAATCGTTTATCCGAAGAAACGCATACATTTGCACAATCATTTATGACTGAACCAACTGATCCATCATCTTTTCATTCACAATTTATATCATCTCAATTCGAAACAACCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD091201             [                                                                                                                                                                                                                                                                                                                                                                                                                                                         CATCTTCACTGATTCCATCTAGTGAATTGGATAAGTCCATTAAGTATCCACATCAATCCCTTGATACAGTTAGTAACAGTGAATTATTCGATTGGCCTGAAACTTATTCAAACTTGTCCCAACCAAATTGCGAGGATGCATCATTATGTCACTAATGATCAATATCCATTGAC AATTTATCCTCTATGGAGCGGAGCTGTTACTGAGTTGGCCACATATTGGGACCAAACGTTGTTACATTCAGATGAAATGTTATATTCAAGTGATTCACCTGATGAGGCAATGAATCGTTTATCCGAAGAAACGCATACATTTGCACAATCATTTATGACTGAACCAACTGATCCATCATCTTTTCATTCACAATTTATATCATCTCAATTCGAAACAACCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD120256             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TCATTATGTCACTAATGATCAATATCCATTGAC AATTTATCCTCTATGGAGCGGAGCTGTTACTGAGTTGGCCACATATTGGGACCAAACGTTGTTACATTCAGATGAAATGTTATATTCAAGTGATTCACCTGATGAGGCAATGAATCGTTTATCCGAAGAAACGCATACATTTGCACAATCATTTATGACTGAACCAACTGATCCATCATCTTTTCATTCACAATTTATATCATCTCAATTCGAAACAACCCATTTTATTCAGCCAACTGGAATTTATGAGAATGGATTGAAAGATTATTTCAGTCAGGATAAATTTATCCCTAAT ATAATATTTATTCAGGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD120218             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CATTATGTCACTAATGATCAATATCCA TGACAAATTTATCCTCTATGGAGCGGAGCTGTTACTGAGCTGGCCACATA TGGGACCAAACG TGTTACATTCAGATGAAATGTTATATTCAAGTGATTCACCTGATGAGGCAATGAATCGTTTATCCGAAGAAACGCATACATTTGCACAATCATTTATGACTGAACCAACTGATCCATCATCTTTTCATTCACAATTTATATCATCTCAATTCGAAACAACCCATTTTATTCAGCCAACTGGAATTTATGAGAATGGATTGAAAGATTATTTCAGTCAGGATAAATTTATCCTAAATAATAATATTTATTCAGGTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD152316             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ATGTCACTAATGATCAATATCCATTGAC AATTTATCCTCTATGGAGCGGAGCTGTTACTGAGTTGGCCACATATTGGGACCAAACGTTGTTACATTCAGATGAAATGTTATATTCAAGTGATTCACCTGATGAGGCAATGAATCGTTTATCCGAAGAAACGCATACATTTGCACAATCATTTATGACTGAACCAACTGATCCATCATCTTTTCATTCACAATTTATATCATCTCAATTCGAAACAACCCA TTTATTCAGCCAACTGGAATTTATGAGAATGGATTGAAAGATTACTTCAGTCAGGATAAATTTATCCTAAATAATAATATCTATTCAGGTATTTGGAATACTATGAAGGAGAACGACAATAATCAAAGTTATCTGTCTACTGAAAACTCACCTGAATATCTGTCTTCAGATCATCTTGTTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD068236             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         tatttataGCAATGAATCGTTTATCCGAAGAAACGCATACATTTGCACAATCATTTATGACTGAACCAACTGATCCATCATCTTTTCATTCACAATTTATATCATCTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD152283             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ACCCATTTTAGTCAGCCAACTGGAATTTATGAGAATGGATTGAAAGATTATTTCAGTCAGGATAAATTTATCCTAAATAATAATATCTATTCAGGTATTTGGAATACTATGAAGGAGAACGACAATAATCAAAGTTATCTGTCTACTGAAAACTCACCTGAATATCTGTCTTCAGATCATCTTGTTGGACAGGGTTTTCTACAGTCTGATCATTTTTGCGATTACCATATAAACAAAATTACAGTTGAAAATGCTTTTAACACTACTTTACCAATTATCTATTCACTAATTCAATGTAATGATGATAGAAAAAAATAGTTCTACCGCATTGCAATCATCTTCAATAAATTTTCCTACAAATACAGACGAATTGGACCGAATAGATACTCCTCTAATCACTCAGATATTTCTCGATGCTTTGCGTACAGCACATCGTCAAATTGTTGATGAAATCAATCCATCTTATCATTATACTAATTCCATTGTTAATTCGTCATCTGAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD152323             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TATTCAGGTATTTGGAATACTATGAAGGAGAACGACAATAATCAAAGTTATCTGTCTACTGAAAACTCACCTGAATATCTGTCTTCAGATCATCTTGTTGGACAGGGTTTTCTACAGTCTGATCATTTTAGTGATTACCATATAAACAAAATTACAGTTGAAAATGCTTTTAACACTACTTTACCAATTATCTATTCACTAATTCAATGTAATGATGATAGAAAAAAATAGTTCTACCGCATTGCAATCATCTTCAATAAATTTTCCTACAAATACAGACGAATTGGACCGAATAGATACTCCTCTAATCACTCAGATATTTCTCGATGCTTTGCGTACAGCACATCGTCAAATTGTTGATGAAATCAATCCATCTTATCATTATACTAATTCCATTGTTAATTCGTCATCTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CD066586             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TGTCTTCAGATCATCTTGTTGGACAGGGTTTTCTACAGTCTGATCATTTTTGTGATTACCATATAAACAAAATTACAGTTGAAAATGCTTTTAACACTACTTTACCAATTATCTATTCACTAATTCAATGTAATGATGATAG AAAAAATAGTTCTACCGCATTGCAATCATCTTCAATAAATTTTCCTACAAATACAGACGAATTGGACCGAATAGATACTCCTCTAATCACTCAGATATTTCTCGATGCTTTGCGTACAGCACATCGTCAAATTGTTGATGAAATCAATCCATCTTATCATTATACTAATTCCATTGTTAATTCGTCATCTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CD066780             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TCTTCAGATCATCTTGTTGGACAGGGTTTTCTACAGTCTGATCATTTTTGTGATTACCATATAAACAAAATTACAGTTGAAAATGCTTTTAACACTACTTTACCAATTATCTATTCACTAATTCAATGTAATGATGATAG AAAAAATAGTTCTACCGCATTGCAATCATCTTCAATAAATTTTCCTACAAATACAGACGAATTGGACCGAATAGATACTCCTCTAATCACTCAGATATTTCTCGATGCTTTGCGTACAGCACATCGTCAAATTGTTGATGAAATCAATCCATCTTATCATTATACTAATTCCATTGTTAATTCGTCATCTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AI976736             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CAATCATCTTCAATAAATTTTCCTACAAATACAGACGAATTGGACCGAATAGATACTCCTCTAATCACTCAGATATTTCTCGATGCTTTGCGTACAGCACATCGTCAAATTGTTGATGAAATCAATCCATCTTATCATTATACTAATTCCATTGTTAATTCGTCATCTGAAAATACTACTCCTGATTACTATACAAATGATGACGATAATAACACAATGCGAATTGATTGCAATCCACATGATAGTTGTCGAACTAGTTTTTGTGAATTATCACGAATTACTGAAAGTAGACGTTTATCTGTATTAAACTATGAAGCCGAAATGAACAGTTCTATTGAAGAAAAGATGGAAATAAAAGAAGAGTATTTCGATTTAGTACCAAATCCTTTGAAGAACGGAGTTAGTAACGACCAAATATCATCCGAAGAATTGTGTGGTTATTCTTCATGGAAATGTATTGTAGACATACCACAATCGGAATTGTTTCAAGAATTAGGATTATCGGAAACCACATCTGAACAATCTAATTNTGTATCAACTGGTTTTATGAATTATG                                                                                                                     ]
[+] EMBL CD152194             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AATAGATACTCCTCTAATCACTCAGATATTTCTCGATGCTTTGCGTACAGCACATCGTCAAATTGTTGATGAAATCAATCCATCTTATCATTATACTAATTCCATTGTTAATTCGTCATCTGAAAATACTACTCCTGATTACTATACAAATGATGACGATTATAACACAATGCGAATTGATTGCAATCCACATGATAGTTGTCGAACTAGTTTTTGTGAATTATCACGAATTACTGAAAGTAGACGTTTATCTGTATTAAACTATGAAGCCGAAATGAACAGTTCTATTGAAGAAAAGATGGAAATAAAAGAAGAGTATTTCGATTTAGTACCAAATCCTTTGAAGAACGGAGTTAGTAACGACCAAATATCATCCGAAGAATTGTGTGGTTATTCTTCATGGAAATGTATTGTAGACATACCACAATCGGAATTGTTTCAAGAATTAG                                                                                                                                                                                 ]
[+] EMBL CD118047             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AATCCATCTTATCATTATACTAATGCCATTGTTAATTCGTCATCTGAAAATACTACTCCTGATTACTATACAAATGATGACGATAATAACACAATGCGAATTGATTGCAATCCACATGATAGTTGTCGAACTAGTTTTTGTGAATTATCACGAATTACTGAAAGTAGACGTTTATCTGTATTAAACTATGAAGCCGAAATGAACAGTTCTATTGAAGAAAAGATGGAAATAAAAGAAGAGT                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD117817             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AATCCATCTTATCATTATACTAATTCCATTGTTAATTCGTCATCTGAAAATACTACTCCTGATTACTATACAAATGATGACGATAATAACACAATGCGAATTAATTGCAATCCACATGATAGTTGTCGAACTAGTTTTTGTGAATTATCACGAATTACTGAAAGTAGACGTTTATCTGTATTAAACTATGAAGCC                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CD160306             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TGATAGTTGTCGAACTAGTTTTTGTGAATTATCACGAATTACTGAAAGTAGACGTTTATCTGTATTAAACTATGAAGCCGAAATGAACAGTTCTATTGAAGAAAAGATGGAAATAAAAGAAGAGTATTTCGATTTAGTACCAAATCCCTTGAAGAACGGAGTTAGTAACGACCAAATATCATCCGAAGAATTGTGTGGTTATTCTTCATGGAAATGTATTGTAGACATACCACAATCGGAATTGTTTCAAGAATTAGGATTATCGGAAACCACATCTGAACAATCTAATTTTGTATCAACTGGTTTTATGAATTATGAGAATATTTTCAACGAATCATCTGCTATTGCCCCATGGACATATATTTTCGAAAAAGTAATCAGAAGAATAAATGGTGTCGACAATAATCAGGATTCTTCGTTAAATTGTGAAAATA]




>consensus_10779#0
AGCTGTTCAGGCATCTATACGACTTACTGAAGATGTTAATAGTAATCATCATCACCATGA
AATACGTCGAAAACAAGCCCAACGTATCTCTTCACGTAAAAAGTGTTATAACTCTTCCTC
ACCATCCTCTGCATCTGGACCTGATGTGGATGATGACAATAATAAGAGTAAGCTAGATCG
TGTAATGAATGTGTTCTATCAAAATGATAATTCACCAGCCCATTTAAATTGTAAATCAGA
TTCAATCGATAAAATATCATCCTCATCTTCTGCTGACAATCAACGTGTTGTAAATCATCA
AAATAAAAAAGAAACTTCAAAATCAACTGTTCCAAGACTACCACATACAAAACAACTCAT
AGATGAATACAATGAATTTATAGCTGAAGAGTGTGTCACTTCACAAGAACTCTTGGAAAC
GGCTAACCATAAATCAATCTCATCTTCACTGATTCCATCTAGTGAATTGGATAAGTCCAT
TAAGTATCCACATCAATCCCTTGATACAGTTAGTAACAGTGAATTATTCGATTGGCCTGA
AACTATTCAAACTTGTCCCAACCAAATTGCGAGGATGCATCATTATGTCACTAATGATCA
ATATCCATTGACAATTTATCCTCTATGGAGCGGAGCTGTTACTGAGTTGGCCACATATTG
GGACCAAACGTTGTTACATTCAGATGAAATGTTATATTCAAGTGATTCACCTGATGAGGC
AATGAATCGTTTATCCGAAGAAACGCATACATTTGCACAATCATTTATGACTGAACCAAC
TGATCCATCATCTTTTCATTCACAATTTATATCATCTCAATTCGAAACAACCCATTTTAT
TCAGCCAACTGGAATTTATGAGAATGGATTGAAAGATTATTTCAGTCAGGATAAATTTAT
CCTAAATAATAATATTTATTCAGGTATTTGGAATACTATGAAGGAGAACGACAATAATCA
AAGTTATCTGTCTACTGAAAACTCACCTGAATATCTGTCTTCAGATCATCTTGTTGGACA
GGGTTTTCTACAGTCTGATCATTTTTGTGATTACCATATAAACAAAATTACAGTTGAAAA
TGCTTTTAACACTACTTTACCAATTATCTATTCACTAATTCAATGTAATGATGATAGAAA
AAAATAGTTCTACCGCATTGCAATCATCTTCAATAAATTTTCCTACAAATACAGACGAAT
TGGACCGAATAGATACTCCTCTAATCACTCAGATATTTCTCGATGCTTTGCGTACAGCAC
ATCGTCAAATTGTTGATGAAATCAATCCATCTTATCATTATACTAATTCCATTGTTAATT
CGTCATCTGAAAATACTACTCCTGATTACTATACAAATGATGACGATAATAACACAATGC
GAATTGATTGCAATCCACATGATAGTTGTCGAACTAGTTTTTGTGAATTATCACGAATTA
CTGAAAGTAGACGTTTATCTGTATTAAACTATGAAGCCGAAATGAACAGTTCTATTGAAG
AAAAGATGGAAATAAAAGAAGAGTATTTCGATTTAGTACCAAATCCTTTGAAGAACGGAG
TTAGTAACGACCAAATATCATCCGAAGAATTGTGTGGTTATTCTTCATGGAAATGTATTG
TAGACATACCACAATCGGAATTGTTTCAAGAATTAGGATTATCGGAAACCACATCTGAAC
AATCTAATTNTGTATCAACTGGTTTTATGAATTATGAGAATATTTTCAACGAATCATCTG
CTATTGCCCCATGGACATATATTTTCGAAAAAGTAATCAGAAGAATAAATGGTGTCGACA
ATAATCAGGATTCTTCGTTAAATTGTGAAAATA

consensusID : consensus_10779#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 468
fasta sequence

                              [TTAAACTATGAAGCCGAAATGAACAGTTCTATTGAAGAAAAGATGGAAATAAAAGAAGAGTATTTCGATTTAGTACCAAATCCTTTGAAGAACGGAGTTAGTAACGACCAAATATCATCCGAAGAATTGTGTGGTTATTCTTCATGGAAATGTATTGTAGACATACCACAATCGGAATTGTTTCAAGAATTAGGAGTAAGTTAATGCCAAGTGTACTTTCGTAAATACATTGTATTTCGGACGTAATAACAACACTGTGATTCAGTTGTACATTCCCCTGTTTTATTACTATCGCTAATACTCGAGTGACTTCGCAGTCACCACATTATATCTCCGTAACAGGATGGCCTGTGGAATCATCGAATGACACTTTGACGCATATAGGGAGTAGCAGAAATTCTGATAGTGGTCAGCGAAACAATCGTAATTTGTGATTGGAAAACATGTTTGTATTGTCTTCATTCAGTC]

[-] EMBL CD152280             [TTAAACTATGAAGCCGAAATGAACAGTTCTATTGAAGAAAAGATGGAAATAAAAGAAGAGTATTTCGATTTAGTACCAAATCCTTTGAAGAACGGAGTTAGTAACGACCAAATATCATCCGAAGAATTGTGTGGTTATTCTTCATGGAAATGTATTGTAGACATACCACAATCGGAATTGTTTCAAGAATTAGGAGTAAGTTAATGCCAAGTGTACTTTCGTAAATACATTGTATTTCGGACGTAATAACAACACTGTGATTCAGTTGTACATTCCCCTGTTTTATTACTATCGCTAATACTCGAGTGACTTCGCAGTCACCACATTATATCTCCGTAACAGGATGGCCTGTGGAATCATCGAATGACACTTTGACGCATATAGGGAGTAGCAGAAATTCTGATAGTGGTCAGCGAAACAATCGTAATTTGTGATTGGAAAACATGTTTGTATTGTCTTCATTCAGTC]




>consensus_10779#1
TTAAACTATGAAGCCGAAATGAACAGTTCTATTGAAGAAAAGATGGAAATAAAAGAAGAG
TATTTCGATTTAGTACCAAATCCTTTGAAGAACGGAGTTAGTAACGACCAAATATCATCC
GAAGAATTGTGTGGTTATTCTTCATGGAAATGTATTGTAGACATACCACAATCGGAATTG
TTTCAAGAATTAGGAGTAAGTTAATGCCAAGTGTACTTTCGTAAATACATTGTATTTCGG
ACGTAATAACAACACTGTGATTCAGTTGTACATTCCCCTGTTTTATTACTATCGCTAATA
CTCGAGTGACTTCGCAGTCACCACATTATATCTCCGTAACAGGATGGCCTGTGGAATCAT
CGAATGACACTTTGACGCATATAGGGAGTAGCAGAAATTCTGATAGTGGTCAGCGAAACA
ATCGTAATTTGTGATTGGAAAACATGTTTGTATTGTCTTCATTCAGTC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10779#0      AGCTGTTCAGGCATCTATACGACTTACTGAAGATGTTAATAGTAATCATCATCACCATGA 60
consensus_10779#1      ------------------------------------------------------------
                                                                                   

consensus_10779#0      AATACGTCGAAAACAAGCCCAACGTATCTCTTCACGTAAAAAGTGTTATAACTCTTCCTC 120
consensus_10779#1      ------------------------------------------------------------
                                                                                   

consensus_10779#0      ACCATCCTCTGCATCTGGACCTGATGTGGATGATGACAATAATAAGAGTAAGCTAGATCG 180
consensus_10779#1      ------------------------------------------------------------
                                                                                   

consensus_10779#0      TGTAATGAATGTGTTCTATCAAAATGATAATTCACCAGCCCATTTAAATTGTAAATCAGA 240
consensus_10779#1      ------------------------------------------------------------
                                                                                   

consensus_10779#0      TTCAATCGATAAAATATCATCCTCATCTTCTGCTGACAATCAACGTGTTGTAAATCATCA 300
consensus_10779#1      ------------------------------------------------------------
                                                                                   

consensus_10779#0      AAATAAAAAAGAAACTTCAAAATCAACTGTTCCAAGACTACCACATACAAAACAACTCAT 360
consensus_10779#1      ------------------------------------------------------------
                                                                                   

consensus_10779#0      AGATGAATACAATGAATTTATAGCTGAAGAGTGTGTCACTTCACAAGAACTCTTGGAAAC 420
consensus_10779#1      ------------------------------------------------------------
                                                                                   

consensus_10779#0      GGCTAACCATAAATCAATCTCATCTTCACTGATTCCATCTAGTGAATTGGATAAGTCCAT 480
consensus_10779#1      ------------------------------------------------------------
                                                                                   

consensus_10779#0      TAAGTATCCACATCAATCCCTTGATACAGTTAGTAACAGTGAATTATTCGATTGGCCTGA 540
consensus_10779#1      ------------------------------------------------------------
                                                                                   

consensus_10779#0      AACTATTCAAACTTGTCCCAACCAAATTGCGAGGATGCATCATTATGTCACTAATGATCA 600
consensus_10779#1      ------------------------------------------------------------
                                                                                   

consensus_10779#0      ATATCCATTGACAATTTATCCTCTATGGAGCGGAGCTGTTACTGAGTTGGCCACATATTG 660
consensus_10779#1      ------------------------------------------------------------
                                                                                   

consensus_10779#0      GGACCAAACGTTGTTACATTCAGATGAAATGTTATATTCAAGTGATTCACCTGATGAGGC 720
consensus_10779#1      ------------------------------------------------------------
                                                                                   

consensus_10779#0      AATGAATCGTTTATCCGAAGAAACGCATACATTTGCACAATCATTTATGACTGAACCAAC 780
consensus_10779#1      ------------------------------------------------------------
                                                                                   

consensus_10779#0      TGATCCATCATCTTTTCATTCACAATTTATATCATCTCAATTCGAAACAACCCATTTTAT 840
consensus_10779#1      ------------------------------------------------------------
                                                                                   

consensus_10779#0      TCAGCCAACTGGAATTTATGAGAATGGATTGAAAGATTATTTCAGTCAGGATAAATTTAT 900
consensus_10779#1      ------------------------------------------------------------
                                                                                   

consensus_10779#0      CCTAAATAATAATATTTATTCAGGTATTTGGAATACTATGAAGGAGAACGACAATAATCA 960
consensus_10779#1      ------------------------------------------------------------
                                                                                   

consensus_10779#0      AAGTTATCTGTCTACTGAAAACTCACCTGAATATCTGTCTTCAGATCATCTTGTTGGACA 1020
consensus_10779#1      ------------------------------------------------------------
                                                                                   

consensus_10779#0      GGGTTTTCTACAGTCTGATCATTTTTGTGATTACCATATAAACAAAATTACAGTTGAAAA 1080
consensus_10779#1      ------------------------------------------------------------
                                                                                   

consensus_10779#0      TGCTTTTAACACTACTTTACCAATTATCTATTCACTAATTCAATGTAATGATGATAGAAA 1140
consensus_10779#1      ------------------------------------------------------------
                                                                                   

consensus_10779#0      AAAATAGTTCTACCGCATTGCAATCATCTTCAATAAATTTTCCTACAAATACAGACGAAT 1200
consensus_10779#1      ------------------------------------------------------------
                                                                                   

consensus_10779#0      TGGACCGAATAGATACTCCTCTAATCACTCAGATATTTCTCGATGCTTTGCGTACAGCAC 1260
consensus_10779#1      ------------------------------------------------------------
                                                                                   

consensus_10779#0      ATCGTCAAATTGTTGATGAAATCAATCCATCTTATCATTATACTAATTCCATTGTTAATT 1320
consensus_10779#1      ------------------------------------------------------------
                                                                                   

consensus_10779#0      CGTCATCTGAAAATACTACTCCTGATTACTATACAAATGATGACGATAATAACACAATGC 1380
consensus_10779#1      ------------------------------------------------------------
                                                                                   

consensus_10779#0      GAATTGATTGCAATCCACATGATAGTTGTCGAACTAGTTTTTGTGAATTATCACGAATTA 1440
consensus_10779#1      ------------------------------------------------------------
                                                                                   

consensus_10779#0      CTGAAAGTAGACGTTTATCTGTATTAAACTATGAAGCCGAAATGAACAGTTCTATTGAAG 1500
consensus_10779#1      -----------------------TTAAACTATGAAGCCGAAATGAACAGTTCTATTGAAG 37
                                              *************************************

consensus_10779#0      AAAAGATGGAAATAAAAGAAGAGTATTTCGATTTAGTACCAAATCCTTTGAAGAACGGAG 1560
consensus_10779#1      AAAAGATGGAAATAAAAGAAGAGTATTTCGATTTAGTACCAAATCCTTTGAAGAACGGAG 97
                       ************************************************************

consensus_10779#0      TTAGTAACGACCAAATATCATCCGAAGAATTGTGTGGTTATTCTTCATGGAAATGTATTG 1620
consensus_10779#1      TTAGTAACGACCAAATATCATCCGAAGAATTGTGTGGTTATTCTTCATGGAAATGTATTG 157
                       ************************************************************

consensus_10779#0      TAGACATACCACAATCGGAATTGTTTCAAGAATTAGGA-----TTATCGGAAACCACATC 1675
consensus_10779#1      TAGACATACCACAATCGGAATTGTTTCAAGAATTAGGAGTAAGTTAATGCCAAGTGTACT 217
                       **************************************     ***  *  **    *  

consensus_10779#0      TGAACAATCTAATTNTGTATCAACTG--------GTTTTATGAATTATGAGAATATTTTC 1727
consensus_10779#1      TTCGTAAATACATTGTATTTCGGACGTAATAACAACACTGTGATTCAGTTGTACATTCCC 277
                       *    **    *** * * **    *            * *** * *   * * ***  *

consensus_10779#0      --AACGAATCATC--TGCTATTGCCCCATGGACAT-ATATTTTCGAAAAAGTAATCAGAA 1782
consensus_10779#1      CTGTTTTATTACTATCGCTAATACTCGAGTGACTTCGCAGTCACCACATTATATCTCCGT 337
                              ** *     **** * * * *  *** *   * *  * * *   **       

consensus_10779#0      GAATAAATGGTGTCGACAATAATCAG--GATTCTTCGTTAAATTGTGAAAATA------- 1833
consensus_10779#1      AACAGGATGGCCTGTGGAATCATCGAATGACACTTTGACGCATATAGGGAGTAGCAGAAA 397
                        *    ****  *    *** ***    **  *** *    **   *  * **       

consensus_10779#0      ------------------------------------------------------------
consensus_10779#1      TTCTGATAGTGGTCAGCGAAACAATCGTAATTTGTGATTGGAAAACATGTTTGTATTGTC 457
                                                                                   

consensus_10779#0      -----------
consensus_10779#1      TTCATTCAGTC 468