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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10789#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1201 fasta sequence
[TCTTTTGGTGTCGCATTTTTCTGTGTAGAAGTTCTGCATAGTATAATTATAGCACTAAATGCACGTCAGTTTTGGCGTAAACTCTATGAATTAATCGGTGTTATTGTGATTAGTTTTGTTGGTTTTACCATACTCATGGGTAGTTTGGTGCCACTTGCATCACTGGATTCAACTATACAATTACCACCCCAAGTTCGTCAAGTTTATAAACATTTACAACCTTATTACATCATCAATAGTTATGGTCTTTTCCGCCGAATGACTGGAGTTGGTGGTCGACCTGAACTTATCTTGGAGGCGGCATCAGATCCAACTGGTCCATGGTATGAATACGGATTCAATTTCAAACCTGGTCGTGTAAATAGAACTCCTCCAGTTGTTATCCCACATCAGCCTCGTTTGGATTGGCAAATGTGGTTTGCTGCGCTCACTAATTATCGTAATCATCCGTGGTTTATGAATTTAATTTATCGATT-ACTGAATCAACAAACTGAGGTCTTGGAACTGCTTGATCCATCTAGTCTGCCGAATAATCCAAAATATATTCGAGCTCATCTGTATACCTACCATTTCACTGATTCTTTTGATAGCAAAGATTGGTGGAAACGTACATTCAAATCTGAATACTTACCACCGGTCACATTGTCTTCTGAAATATTACGTAATGCTGTTGAAGAAAATGGTTTAGTTGGAAAACGCCGTCCACGTCCACACGATCCAACAATTGTATCAAATTTCTTAACTCGTCTACGAAATTTTATTGGACAACCACGTGATTTATCTCCATTGATTATGGTATGCATAGTATTGGCAATAACTAAATATGCATTTAATCGAGCTGATCAATCGGTTAGAATAACTAATCAAAACAAGGCTTAATTTATTTTCTCAGATCAAAATTAATTCAATGGAATATATATTTTAATGTGATCATAACAAGTGTATTTGTTTGTATTTAAGTTATGTTCCTGTG--TGTGTGTGTGTGTATTCTTTCCATTCCATTTTCG---CTTCTTCTTCTTTCTATATTCCATAATTTTTATTTCACTTAAACTCATTCATTAATTCATTCACTGAAGTATGCATATGAAATAGACTGATTGTTTTGTTTACCTCTTTTTANAAATTAAATAATGCCATCAACTGTGTATTCATGTTTAATCTAGTACTTTCGTTTCCGTTCATATTTATTCATCTATGTAGC]
[-] EMBL CD161205 [TCTTTTGGTGTCGCATTTTTCTGTGTAGAAGTTCTGCATAGTATAATTATAGCACTAAATGCACGTCAGTTTTGGCGTAAACTCTATGAATTAATCGGTGTTATTGTGATTAGTTTTGTTGGTTTTACCATACTCATGGGTAGTTTGGTGCCACTTGCATCACTGGATTCAACTATACAATTACCACCCCAAGTTCGTCAAGTTTAT ]
[-] EMBL CD127256 [ TCTGTGTTGAAGTTCTGCATAGTATAATTATAGCACTAAATGCACGTCAGTTTTGGCGTAAACTCTATGAATTAATTGGTGTTATTGTGATTGGTTTTGTTGGTTTTACCATACTCATGGGTAGTTTGGTGCCACTTGCATCACTGGATTCGACTATACAATTACCACTTCAAGTTCGTCAAGTTTATAAACATTTACAACCTTATTACATCATCAATAGTTATGGTCTTTTCCGCCGAATGACTGGAGTTGGTGGTCGACCTGAACTTATCTTGGAGGCGGCATCAGATCCAACTGGTCCATGGTATGAATACGGATTCAATTTCAAACCTGGTCGTGTAAATAGAACTCCTCCAGTTGTTATCCCACATCAGCCTCGTTTGGATTGGCAAATGTGGTTTGCTGCGCTCACTAATTATCGTAATCATCCGTGGTTTATGAATTTAATTTATCGATT ACTGAATCAACAAACTGAGGTCTTGGAACTGCTTGATCCATCTAGTGTGCCGAATAATCCAAAATATATTCGAGATCATCTGTATACCT ]
[+] EMBL CD180225 [ tTGATATTATNTTGGAGGGGGGATTAGATNNAATTGGTNNATGGTATGAATACGGATTCAATTTCAAACCTGGTCGTGTAAATAGAACTCCTCCAGTTGTTATCCCACATCAGCCTCGTTTGGATTGGCAAATGTGGTTTGCTGCGCTCACTAATTATCGTAATCATCCGTGGTTTATGAATTTAATTTATCGATT ACTGAATCAACAAACTGAGGTCTTGGAACTGCTTGATCCATCTAGTCTGCCGAATAATCCAAAATATATTCGAGCTCATCTGTATACCTACCATTTCACTGATTCTTTTGATAGCAAAGATTGGTGGAAACGTACATTCAAATCTGAATACTTACCACCGGTCACATTGTCCTCTGAAATATTACCTAATGCTGTTGAAG AAACGGATTA TTTGAAAACGCCGT ATCGTCCACATGATCCAAC ATTGGATCAACTTTCTTAACTCGTCTACGAAA ]
[+] EMBL CD077368 [ ATCCAACTGGTCCATGGTATGAATACGGATTCATTTTCAAACCTGGTCGTGTCAATCGAACTCCTCCAGTTGTTATCCCACATCAGCCTCGTTTGGATTGGCAAATGTGGTTTGCTGCGCTCACTAATTATCGTAATCATCCGTGGTTTATGAATTTAATTTATCGATTCACTGAATCAACAAACTGAGGTCTTGGAACTGCTTGATCCATCTAGTCTGCCGAATAATCCAAAATATATTCGAGCTCATCTGTATACCTACCATTTCACTGATTCTTTTGATAGCAAAGATTGGTGGAAACGTACATTCAAATCTGAATACTTACC ]
[+] EMBL CD191332 [ TTTATTGTTT ACCGAATCAACAAACTGAGGTCTTGGAACTGCTTGATCCATCTAGTCTGCCGAATAATCCAAAATATATTCTAGCTCATCTGTATACCTACCATTTCACTGATTCTTTTGATAACAAATATTGGTGGAAACGTACATTCAAATCTGAATACTTACCACCGGTCACATTGTCTTCTGAAATATTACGTAATGCTGGTGAACAAAATGGTTTAGTTGGAAAACGCCGTCCACGTCCACACTATCCAACAATTGTATCAAATTTCTTAACTCGTCTACGAAATTTTATTGGACAACCACGTGATTTATCTCCATTGATTATGGCATGCATAGTATTGGCAATAACTAAATATGCAT ]
[+] EMBL CD191323 [ TTATCGTTT ACCGAATCAACAAACTGAGGTCTTGGAACTGCTTGATCCATCTAGTCTGCCGAATAATCCAAAATATATTCGAGCTCATCTGTATACCTACCATTTCACTGATTCTTTTGATAGCAAAGATTGGTGGAAACGTACATTCAAATCTGAATACTTACCACCGGTCACATTGTCTTCTGAAATATTACGTAATGCTGTTGAAGAAAATGGTTTAGTTGGAAAACGCCGTCCACGTCCACACGATCCAACAATTGTATCAAATTTCTTAACTCGTCTACGAAATTTTATTGGACAACCACGTGATTTATCTCCATTGATTATGGTATGCATAGTATTGGCAATAACTAAATATGCATTTAATCGAGCTGATCAATCGGTTAGAATAACTAATCAAAACAAGGCTTAATTTATTTTCTCAAATCAAAATTAATTCAATG ]
[+] EMBL CD191223 [ TTATCGATT ACTGAATCAACAAACTGAGGTCTTGGAACTGCTTGATCCATCTAGTCTGCCGAATAATCCAAAATATATTCGAGCTCATCTGTATACCTACCATTTCACTGATTCTTTTGATAGCAAAGATTGGTGGAAACGTACATTCAAATCTGAATACTTACCACCGGTCACATTGTCTTCTGAAATATTACGTAATGCTGTTGAAGAAAATGGTTTAGTTGGAAAACGCCGTCCACGTCCACACGATCCAACAATTGTATCAAATTTCTTAACTCGTCTACGAAATTTTATTGGACAACCACGTGATTTATCTCCATTGATTATGGTATGCATAGTATTGGCAATAACTAAATATGCATTTAATCGAGCTGATCAATCGGTTAGAATAACTAATCAAAACAAGGCTTAATTTATTTTCTCAAATCAAAATTAATTCAATGGAATATATATTTTAATGTGATCATAACAAGTGTATTTGTTTGTATTTAAGTTATGTTCCTGTG TGTGTGTGTGTGTATTCTTTCCATTCCATTTTCG CTTCTTCTTCTTTCTATATTCCATAATTNTTATTTCACTTAAACTCATTCATTAATTCATTCACTGAAGTATG ]
[+] EMBL CD078940 [ CCTACCATTTCACTGATTCTTTTGATAGCAAAGATTGGT AAACGTACATTCAAATCTGAATACTTACCACCGGTCACATTGTCTTCTGAAATATTACGTAATGCTGTTGAAGAAAATGGTTTAGTTGGAAAACGCCGTCCACGTCCACACGATCCAACAATTGTATCAAATTTCTTAACTCGTCTACGAAATTTTATTGGACAACCACGTGATTTATCTCCATTGATTATGGTATGCATAGTATTGGCAATAACTAAATATGCATTTAATCGAGCTGATCAATCGGTTAGAATAACTAATCAAAACAAGGCTTAATTTATTTTCTCAGATCAAAATTAATTCAATGGAATATATATTTTAATGTGATCATAACAAGTGTATTTGTTTGTATTTAAGTTATGTTCCTGTG TGTGTGTGTGTGTATTCTTTCCATTCCATTTTCG CTTCTTCTTCTTTCTATATTCCATAATTTTTATTTCACTTAAACTCATTCATTAATTCATTCACTGAAGTATTCATATGAAATAGACTGATTGTTTTGTTTACCTCTTTTTANAAATTAAATAATGCCATCAACTGTGTATTCATGTTTAATCTAGTACTTTCGTTTCCGTTCATATTTATTCATCTATGTAGC]
[+] EMBL CD111332 [ CTGAATACTTACCACCGGTCACATTGTCTTCTGAAATATTACGTAATGCTGTTGAAGAAAATGGATTAGTTGGAAAACGCCGTCATCGTCCACATGATCCAACAATTGTATCAACTTTCTTAACTCGTCTACGAAATTTTATTGGACAACCACGTGATTTATCTCCATTGATTATGGTATGCATAGTATTGGCAATAACTAAATATGCATTTAATCGAGCTGATCAATCGGTTAGAATAACTAATCAAAATAAGGCTTAATTTATTTTCTCAGATCAAAATTAATTCAATGGAATATATATTTTAATGTGATCATAACAAGTGTATTGGTTTGTATTTAAGTTATGTTCTTGTGTATGTGTGTGTGTGTATTCTTTCCATTCCATTTTCGGTTCTTCTTCTTCTTTCTATATTCCATATGTTTTt ]
[+] EMBL CD168395 [ GTTGAAGAAAATGGTTTAGTTGGAAAACGCCGTCCACGTCCACACGATCCAACAATTGTATCAAATTTCTTAACTCGTCTACGAAATTTTATTGGACAACCACGTGATTTATCTCCATTGATTATGGTATGCATAGTATTGGCAATAACTAAATACGCATTTAATCGAGCTGATCAATCGGTTAGAATAACTAATCAAAACAAGGCTTAATTTATTTTCTCAGATCAAAATTAATTCAATGGAATATATATTTTAATGTGATCATAACAAGTGTATTTGTTTGTATTTAAATTATGTTCCTGTG TGTGCGTGTGTGTATTCTTTCCATTCCATTTTCG CTTCTT ]
[-] EMBL CD168321 [ TTGAAGAAAATGGTTTAGTTGGAAAACGCCGTCCACGTCCACACGATCCAACAATTGTATCAAATTTCTTAACTCGTCTACGAAATTTTATTGGACAACCACGTGATTTATCTCCATTGATTATGGTATGCATAGTATTGGCAATAACTAAATACGCATTTAATCGAGCTGATCAATCGGTTAGAATAACTAATCAAAACAAGGCTTAATTTATTTTCTCAGATCAAAATTAATTCAATGGAATATATATTTTAATGTGATCATAACAAGTGTATTTGTTTGTATTTAAGTTATGTTCCTGTG TGTGCGTGTGTGTATTCTTTCCATTCCATTTTCG CTTCTTCTTCTT ]
consensusID : consensus_10789#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 814 fasta sequence
[TGGTCCGAGGAGCAAAGATTGGTGGAAACGTACATTCAAATCTTAATACTTACCACCGGTCACATTGTCTTCTGAAATATTACGTAATGCTGTTGAAGAAAATGGTTTAGTTGGAAAACGCCGTCCACGTCCACACGATCCAACAATTGTATCAAATTTCTTAACTCGTCTACGAAATTTTATTGGACAACCACGTGATTTATCTCCATTGATTATGGTATGCATAGTATTGGCAATAACTAAATATGCATTTAATCGAGCTGATCAATCGGTTAGAATAACTAATCAAAACAAGGCTTAATTTATTTTCTCAGATCAAAATTAATTCAATGGAATATATATTTTAATGTGATCATAACAAGTGTATTTGTTTGTATTTAAGTTATGTTCC--TGTG--TGTGTGTGTGTGTATTCTTTCCATTCCATTTTCG---CTTCTTCTTCTTTCTATATTCCATA-----ATTTTTATTTCACTTAAACTCATTCATTAATTCATTCACTGAAGTATTCATATGAAATAGACTGATTGTTTTGTTTACCTCTTTTTAAAAATTAAATAATGCCATCAACTGTGTATTCATGTTTAATCTAGTACTTTCGTTTCCGTTCATATTTATTCATCTATGTAGCCAATGTTTCTTTAACATAAATGTACCTTCCAGTCATTGTTTTCCATAAGTTAATTCAAAG-TT-CTGGTCGTC-TTTTTTAAATCTCTTTTTATCTAATATATATATGTATCAATGTAGCTGTA-CC-ATTT-AG-AAAAAAACACTTATTAAGTGGATCGTAGTATATTTGAAATCG-TTAAAG-AAAAAATATTGTTT]
[+] EMBL CD082191 [TGGTCCGAGGAGCAAAGATTGGTGGAAACGTACATTCAAATCTTAATACTTACCACCGGTCACATTGTCTTCTGAAATATTACGTAATGCTGTTGAAGAAAATGGTTTAGTTGGAAAACGCCGTCCACGTCCACACGATCCAACAATTGTATCAAATTTCTTAACTCGTCTACGAAATTTTATTGGACAACCACGTGATTTATCTCCATTGATTATGGTATGCATAGTATTGGCAATAACTAAATATGCATTTAATCGAGCTGATCAATCGGTTAGAATAACTAATCAAAACAAGGCTTAATTTATTTTCTCAGATCAAAATTAATTCAATGGAATATATATTTTAATGTGATCATAACAAGTGTATTTGTTTGTATTTAAGTTATGTTCC TGTG TGTGTGTGTGTGTATTCTTTCCATTCCATTTTCG CTTCTTCTTCTTTCTATATTCCATA ATTTTTATTTCACTTAAACTCATTCATTAATTCATTCACTGAAGTATTCATATGAAATAGACTGATTGTTTTGTTTACCTCTTTTTAAAAATTAAATAATGCCATCAACTGTGTATTCATGTTTAATCTAGTACTTTCGTTTCCGTTCATATTTATTCATCTATGTAGCCAATGTTTCTTT ACATANATGTACCTTCCAGTCATTGGTTTCCATAAGTTAATTCANAG TT CTGGTCGTC TTTTNT AATCTC TTTTATCT ATATATATATGGATC ATGTAGCTGTA CC ATTT AG AAAAAACAC TATT AGTGGATCGTAG ATATTTGA ]
[+] EMBL CD079856 [ CGGTC CATTGTCTTCTGAACTATTACGTAATGCTGTTGAAGAAAATGGTTTAGTTGGAAAACGCCGTCCACGTCCACACGATCCAACAATTGTATCAAATTTCTTAACTCGTCTACGAAATTTTATTGGACAACCACGTGATTTATCTCCATTGATTATGGTATGCATAGTATTGGCAATAACTAAATATGCATTTAATCGAGCTGATCAATCGGTTAGAATAACTAATCAAAACAAGGCTTAATTTATTTTCTCAGATCAAAATTAATTCAATGGAATATATATTTTAATGTGATCATAACAAGTGTATTTGTTTGTATTTAAGTTATGTTCC TGTG TGTGTGTGTGTGTATTCTTTCCATTCCATTTTCG CTTCTTCTTCTTTCTATATTCCATA ATTTTTATTTCACTTAAACTCATTCATTAATTCATTCACTGAAGTATTCATATGAAATAGACTGATTGTTTTGTTTACCTCTTTTTAAAAATTAAATAATGCCATCAACTGTGTATTCATGTTTAATCTAGTACTTTCGTTTCCGTTCATATTTATTCATCTATGTAGCCAATGTTTCTTTAACATAAATGTACCTTCCAGTCATTGTTTTCCATAAGTTAATTCAAAG TTCCTGGTCGTC TTTTTTAAATCTCTTTTTATCTAATATATATATGTATCAATGTAGCTGTA CCAATTT AG AAAAAAACACTTATTAGGTGGATCGTNATATAATTGAAATCG TTAAAG AAAAAATATTGT ]
[-] EMBL CD111390 [ cgacTTTCTTAACTCGTCTACGAAATTTTATTGGACAACCACGTGATTTATCTCCATTGATTATGGTATGCTTGGTATTGGCAATAACTAAATATGCATTTAATCGAGCTGATCAATCGGTTAGAATAACTAATCAAAATAAGGCTTAATTTATTTTCTCAGATCAAAATTAATTCAATGGAATATATATTTTAATGTGATCATAACAAGTGTATTGGTTTGTATTTAAGTTATGTTCT TGTGTATGTGTGTGTGTGTATTCTTTCCATTCCATTTTCGGTTCTTCTTCTTCTTTCTATATTCCATATGTTTTTTTTTATTTCACTGATACTTATGCATAAATTCATTCACTGAAGTATTCATATGAAATAGACTTAATGTTTTGTTTACCTCTTTTTTAAAATTAAATGATGCCATCAACTTTGTATT ]
[-] EMBL CD073395 [ CATAGTA TGGCAATAACTAAATATGCATTTAATCGAGCTGATCAATCGGTTAGAATAACTAATCAAAACAAGGCTTAATTTATTTTCTCAGATCAAAATTAATTCAATGGAATATATATTTTAATGTGATCATAACAAGTGTATTTGTTTGTATTTAAGTTATGTTCC TGTG TGTGTGTGTGTGTATTCTTTCCATTCCATTTTCG CTTCTTCTTCTTTCTATATTCCATA ATTTTTATTTCACTTAAACTCATTCATTAATTCATTCACTGAAGTATTCATATGAAATAGACTGATTGTTTTGTTTACCTCTTTTTAAAAATTAAATAATGCCATCAACTGTGTATTCATGTTTAATCTAGTACTTTCGTTTCCGTTCATATTTATTCATCTATGTAGCCAATGTTTCTTTAACATAAATGTACCTTCCAGTCATTGTTTTCCATAAGTTAATTCAAAG TT CTGGTCGTC TTTTTTAAATCTCTTTTTATCTAATATATATATGTATCAATGTAGCTGTA CCAATTT AGAAAAAAAACACTTATTAAGTGGATCGTAGTATATTTGAAATCGTTTAAAGAAAAAAATATTGTTT]
[-] EMBL CD075804 [ ACAAGGCTTAATTTATTTTCTCAGATCAAAATTAATTCAATGGAATATATATTTTAATGTGATCATAACAAGTGTATTTGTTTGTATTTAAGTTATGTTCC CGGG GGGGGGGGTGGGTATTCTTTCCATTCCATTTTCG CTTTTTTTTCTTTCTATATTCCATA ATTTTTATTTCCCTTAAACTCATTCATTAATTCATTCCCTGAAGTATTCATATGAAATAGACTGATTGTTTTGTTTACCTCTTTTTAAAAATTAAATAATGCCCTCAACTGGGTATTCATGTTTAATTTAGGACTTTCGTTTCCGTTCATATTTATTCATCTATGTAGCCAATGTTTTTTTAACATAAATGTACCTTCCAGTCATTGTTTTCCATAAGTTAATTCAAAG TT CTGGTCGTC TTTTTTAAATCTCTTTTTATTTAATATATATATGTATCAATGTAGCTGTACCC ATTTAAA AAAAAAACCCTTATTAAGTGGATCGTAGTATATTTG ]
[-] EMBL AI068329 [ CTTAATTTATTTTCTCAGATCAAAATTAATTCAATGGAATATATATTTTAATGTGATCATAACAAGTGTATTTGTTTGTATTTAAGTTATGTTCCTGTGTG TGTGTGTGTGTGTATTCTTTCCATTCCATTTTCG CTTCTTCTTCTTTCTATATTCCATA ATTTTTATTTCACTTAAACTCATTCATTAATTCATTCACTGAAGTATTCATATGAAATAGACTGATTGTTTTGTTTACCTCTTTTTAAAAATTAAATAATGCCATCAACTGTGTATTCATGTTTAATCTAGTACTTTCGTTTCCGTTCATATTTATTCATCTATGTAGCCAATGTTTCTTTAACATAAATGTACCTTCCAGTCATTGTTTTCCATAAGTTAATTCAAAG TT CTGGTCGTCTTTTTTTAAATCTCTTTTTATCTAATATATATATG ]
[-] EMBL CD077006 [ TTTTTTTTCTTTCTATATTCCATA AATTTTATTTCCCTTAAACTCATTCATTAATTCATTCCCTGAAGTATTCATATGAAATAGACTGATTGTTTTGTTTACCTCTTTTTAAAAATTAAATAATGCCCTCCACTGTGTATTCATGTTTAATCTAGGACTTTCGTTTCCGTTCATATTTATTCATCTATGTAGCCAATGTTTTTTTAACATAAATGTACCTTCCAGTCATTGTTTTCCATAAGTTAATTCAAAGTTT CTGGTCGTC TTTTTTAAATCTCTTTTTATCTAATATATATATGTATCAATGTAGCTGGACCC ATTT AGAAAAAAAACCCTTATTAAGTGGATCGTAGTATATTTG ]
consensusID : consensus_10789#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 317 fasta sequence
[ATTTATTTTCTCAGATCAAAATTAATTCAA-TGGAATATATATTTTAATGTGATCATAACAAGTGTATTGGTTTGTATTTAAGTTATGTTCTTGTGTATGTGTGTGTGTGTATTCTTTCCATTCCATTTTCGGTTCTTCTTCTTCTTTCTATATTCCATATGTTTTTTTTTATTTCACTGATACTTATGCATAAATTCATTCACTGAAGTATTCATATGAAATAGACTTAATGTTTTGTTTACCTCTTTTTTAAAATTAAATGATGCCATCAACTTTGTATTCATGTTTAATCTAGTACTTTCGTTTCCGTTCATATT]
[+] EMBL CD126263 [ATTTATTTTCTCAGATCAAAATTAATTCAACTGGAATATATATTTTAATGTGATCATAACAAGTGTATTGGTTTGTATTTAAGTTATGTTCTTGTGTATGTGTGTGTGTGTATTCTTTCCATTCCATTTTCGGTTCTTCTTCTTCTTTCTATATTCCATATGTTTTTTTTTATTTCACTGATACTTATGCATAAATTCATTCACTGAAGTATTCATATGAAATAGACTTAATGTTTTGTTTACCTCTTTTTTAAAATTAAATGATGCCATCAACTTTGTATTCATGTTTAATCTAGTACTTTCGTTTCCGTTCATATT]
[+] EMBL CD126265 [ATTTA TTTCTCAGATCAAAATTAATTCAA TGGAATATATATTTTAATGTGATCATAACAAGTGTATTGGTTTGTATTTAAGTTATGTTCTTGTGTATGTGTGTGTGTGTATTCTTTCCATTCCATTTTCGGTTCTTCTTCTTCTTTCTATATTCCATATGTTTTTTTTTATTTCACTGATACTTATGCATAAATTCATTCACTGAAGTATTCATATGAAATAGACTTAATGCTTTGTTTACCTCTTTTTTAAAATTAAATGATGCCATCAACTTTGTATTCATGTTTAATCTAGTACTTTCGTTTCCG ]
[-] EMBL CD063228 [ TTTTCTCAGATCAAAATTAATTCAA TGGAATATATATTTTAATGTGATCATAACAAGTGTATTGGTTTGTATTTAAGTTATGTTCTTGTGTATGTGTGTGTGTGTATTCTTTCCATTCCATTTTCGGTTCTTTTTCTTCTTTCTATATTCCATATGTTTTTTTTTATTTCACTGATACTTATGCATAAATTCATTCACTGAAGTATTCATATGAAATAGACTTAATGTTTTGTTTACCTCTTTTTTAAAATTAAATGATGCCATCAACTTTGTATTCATGTTTAATCTAGTACTTTCGTTTCCGT ]
consensusID : consensus_10789#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 266 fasta sequence
[TCGGTCCGAGGCAAACTGAGGTCTTGGAACTGCTTGATCCATCTAGTCTGCCGAATAATCCAAAATATATTCGAGCTCATCTGTATACCTACCATTTCACTGATTCTTTTGATAGCAAAGATTGGTGGAAACGTACATTCAAATCTGAATACTTACCACCGGTCACATTGTCTTCTGAAATATTACGTAATGCTGTTGAAGAAAATGGTTTAGTTGGAAAACGCCGTCCACGTCCACACGATCCAACAATTGTATCAAATTTCTTA]
[+] EMBL CD077681 [TCGGTCCGAGGCAAACTGAGGTCTTGGAACTGCTTGATCCATCTAGTCTGCCGAATAATCCAAAATATATTCGAGCTCATCTGTATACCTACCATTTCACTGATTCTTTTGATAGCAAAGATTGGTGGAAACGTACATTCAAATCTGAATACTTACCACCGGTCACATTGTCTTCTGAAATATTACGTAATGCTGTTGAAGAAAATGGTTTAGTTGGAAAACGCCGTCCACGTCCACACGATCCAACAATTGTATCAAATTTCTTA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10789#0 TCTTTTGGTGTCGCATTTTTCTGTGTAGAAGTTCTGCATAGTATAATTATAGCACTAAAT 60
consensus_10789#3 ------------------------------------------------------------
consensus_10789#1 ------------------------------------------------------------
consensus_10789#2 ------------------------------------------------------------
consensus_10789#0 GCACGTCAGTTTTGGCGTAAACTCTATGAATTAATCGGTGTTATTGTGATTAGTTTTGTT 120
consensus_10789#3 ------------------------------------------------------------
consensus_10789#1 ------------------------------------------------------------
consensus_10789#2 ------------------------------------------------------------
consensus_10789#0 GGTTTTACCATACTCATGGGTAGTTTGGTGCCACTTGCATCACTGGATTCAACTATACAA 180
consensus_10789#3 ------------------------------------------------------------
consensus_10789#1 ----------------------------------------TGGTCCGAGGAGCAAAGATT 20
consensus_10789#2 ------------------------------------------------------------
consensus_10789#0 TTACCACCCCAAGTTCGTCAAGTTTATAAACATTTACAACCTTATTACATCATCAATAGT 240
consensus_10789#3 ------------------------------------------------------------
consensus_10789#1 GGTGGAAACGTACATTCAAATCTTAATACTTACCACCGGTCACATTGTCTTCTGAAATAT 80
consensus_10789#2 ------------------------------------------------------------
consensus_10789#0 TATGGTCTTTTCCGCCGAATGACTGGAGTTGGTGGTCGACCTGAACTTATCTTGGAGGCG 300
consensus_10789#3 ------------------------------------------------------------
consensus_10789#1 TACGTAATGCTGTTGAAGAAAATGGTTTAGTTGGAAAACGCCGTCCACGTCCACACGATC 140
consensus_10789#2 ------------------------------------------------------------
consensus_10789#0 GCATCAGATCCAACTGGTCCATGGTATGAATACGGATTCAATTTCAAACCTGGTCGTGTA 360
consensus_10789#3 ------------------------------------------------------------
consensus_10789#1 CAACAATTGTATCAAATTTCTTAACTCGTCTACGAAATTTTATTGGACAACCACGTGATT 200
consensus_10789#2 ------------------------------------------------------------
consensus_10789#0 AATAGAACTCCTCCAGTTGTTATCCCACATCAGCCTCGTTTGGATTGGCAAATGTGGTTT 420
consensus_10789#3 ------------------------------------------------------------
consensus_10789#1 TATCTCCATTGATTATGGTATGCATAGTATTGGCAATAACTAAATATGCATTTAATCGAG 260
consensus_10789#2 ------------------------------------------------------------
consensus_10789#0 GCTGCGCTCACTAATTATCGTAATCATCCGTGGTTTATGAATTTAATTTATCGATTACTG 480
consensus_10789#3 --------------------------------------------------TCGGT--CCG 8
consensus_10789#1 CTGATCAATCGGTTAGAATAACTAATCAAAACAAGGCTTAATTTATTTTCTCAGAT-CAA 319
consensus_10789#2 ----------------------------------------ATTTATTTTCTCAGAT-CAA 19
** *
consensus_10789#0 AATCAACAAACTGAGGTCTTGGAACTGCT-TGATC-CATCTAGTCTGCCGAATA--ATCC 536
consensus_10789#3 AG---GCAAACTGAGGTCTTGGAACTGCT-TGATC-CATCTAGTCTGCCGAATA--ATCC 61
consensus_10789#1 AATTAATTCAATGGAATATATATTTTAATGTGATCATAACAAGTGTATTTGTTTGTATTT 379
consensus_10789#2 AATTAATTCAATGGAATATATATTTTAATGTGATCATAACAAGTGTATTGGTTTGTATTT 79
* * ** * * * * ***** * * *** * * **
consensus_10789#0 AAAATATATTC--------GAGCTCATCTGTATACCTACCATTTCACT------------ 576
consensus_10789#3 AAAATATATTC--------GAGCTCATCTGTATACCTACCATTTCACT------------ 101
consensus_10789#1 AAGTTATGTTCCTGTGT--GTGTGTGTGTGTATTCTTTCCATTCCATTTTCG---CTTCT 434
consensus_10789#2 AAGTTATGTTCTTGTGTATGTGTGTGTGTGTATTCTTTCCATTCCATTTTCGGTTCTTCT 139
** *** *** * * * ***** * * ***** ** *
consensus_10789#0 GATTCTTTTGATAGCAAAGAT---TGGTGGAAACGTACATTCAAATCTGAATACTTACCA 633
consensus_10789#3 GATTCTTTTGATAGCAAAGAT---TGGTGGAAACGTACATTCAAATCTGAATACTTACCA 158
consensus_10789#1 TCTTCTTTCTATATTCCATAA-----TTTTTATTTCACTTAAACTCATTCATTAATTCAT 489
consensus_10789#2 TCTTCTTTCTATATTCCATATGTTTTTTTTTATTTCACTGATACTTATGCATAAATTCAT 199
****** *** * * * * ** * * ** * *
consensus_10789#0 CCGGTCACATTGTCTTCTGAAATATTACGTAATGCT--GTTGAAGAAAATGGTTTAGTTG 691
consensus_10789#3 CCGGTCACATTGTCTTCTGAAATATTACGTAATGCT--GTTGAAGAAAATGGTTTAGTTG 216
consensus_10789#1 TCACTGAAGTATTCATATGAAATAG-ACTGATTGTTTTGTTTACCTCTTTTTAAAAATTA 548
consensus_10789#2 TCACTGAAGTATTCATATGAAATAG-ACTTAATGTTTTGTTTACCTCTTTTTTAAAATTA 258
* * * * ** * ******* ** * ** * *** * * * **
consensus_10789#0 GAAAACGCCGTCCAC---GTCCACACG----ATCCAACAATTGTATCAAATTTCTTAACT 744
consensus_10789#3 GAAAACGCCGTCCAC---GTCCACACG----ATCCAACAATTGTATCAAATTTCTTA--- 266
consensus_10789#1 AATAATGCCATCAACTGTGTATTCATGTTTAATCTAGTACTTTCGTTTCCGTTCATATTT 608
consensus_10789#2 AATGATGCCATCAACTTTGTATTCATGTTTAATCTAGTACTTTCGTTTCCGTTCATATT- 317
* * *** ** ** ** ** * *** * * ** * *** **
consensus_10789#0 CGTCTACGAAATTTTATTGGACAACCACGTGATTTATCTCCATTGATTATGGTATGCATA 804
consensus_10789#3 ------------------------------------------------------------
consensus_10789#1 ATTCATCTATGTAGCCAATGTTTCTTTAACATAAATGTACCTTCCAGTCATTGTTTTCCA 668
consensus_10789#2 ------------------------------------------------------------
consensus_10789#0 GTATTGGCAATAACTAAATATGCATTTAATCGAGCTGATCAATCGGTTAGAATAACTAAT 864
consensus_10789#3 ------------------------------------------------------------
consensus_10789#1 TAAGTTAATTCAAAGTTCTGGTCGTCTTTTTTAAATCTCTTTTTATCTAATATATATATG 728
consensus_10789#2 ------------------------------------------------------------
consensus_10789#0 CAAAACAAGGCTTAATTTATTTTCTCAGATCAAAATTAATTCAATGGAATATATATTTTA 924
consensus_10789#3 ------------------------------------------------------------
consensus_10789#1 TATCAATGTAGCTGTACCATTTAGAAAAAAACACTTATTAAGTGGATCGTAGTATATTTG 788
consensus_10789#2 ------------------------------------------------------------
consensus_10789#0 ATGTGATCATAACAAGTGTATTTGTTTGTATTTAAGTTATGTTCCTGTGTGTGTGTGTGT 984
consensus_10789#3 ------------------------------------------------------------
consensus_10789#1 AAATCGTTAAAGAAAAAATATTGTTT---------------------------------- 814
consensus_10789#2 ------------------------------------------------------------
consensus_10789#0 GTATTCTTTCCATTCCATTTTCGCTTCTTCTTCTTTCTATATTCCATAATTTTTATTTCA 1044
consensus_10789#3 ------------------------------------------------------------
consensus_10789#1 ------------------------------------------------------------
consensus_10789#2 ------------------------------------------------------------
consensus_10789#0 CTTAAACTCATTCATTAATTCATTCACTGAAGTATGCATATGAAATAGACTGATTGTTTT 1104
consensus_10789#3 ------------------------------------------------------------
consensus_10789#1 ------------------------------------------------------------
consensus_10789#2 ------------------------------------------------------------
consensus_10789#0 GTTTACCTCTTTTTANAAATTAAATAATGCCATCAACTGTGTATTCATGTTTAATCTAGT 1164
consensus_10789#3 ------------------------------------------------------------
consensus_10789#1 ------------------------------------------------------------
consensus_10789#2 ------------------------------------------------------------
consensus_10789#0 ACTTTCGTTTCCGTTCATATTTATTCATCTATGTAGC 1201
consensus_10789#3 -------------------------------------
consensus_10789#1 -------------------------------------
consensus_10789#2 -------------------------------------
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||