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Schistosoma mansoni
cluster # 10795 cluster # 10795       Sequences # 22       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10795#0 length = 880 sequences # 18  
consensus_10795#1 length = 587 sequences # 3  
consensus_10795#2 length = 137 sequences # 1  

consensusID : consensus_10795#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 18
consensus length = 880
fasta sequence
                              [TTAGTTGCGTTGTTGCGTTGCGTGCACCTATGTGCAAGTATTTCCTAGCTTATTATGTACTTTGTTTCGCCATCTCTGTCTCTCCATTACTATCAAAAGAAAGCACCAAATACAACCTTTTTATCGAGGAACGTGCGGTTCTTGATAAGTTGAATGATGCTGGAGTTAATGTATTTTCAAAGTCTGGTCAGAAGTTCTCCTGTTCATGGGGTACAGACAGTGGTGCAGAACCTAATAACGCCACTTCACAATTGTCTAGCAGCGTCGTACATTCACTGCTGTCCATG-TTTAGTGGGTTTGATTGTCTAAGAGTG-AAAAAAGGTTGGTGGACATACGAG--TTTTGTTTCCGAAAGTATGTTGTTCAGTATCACGATGAATCTAAGGAAACATCTAAAACTTTACTCGGGATTTTTGAGTCGGAATTCGACTGGGACAATTCTACAGAGAAACCCAAATACCATAGCCAGTTTTATTCAAATGGAAGTATATGTGACTTGACAAATATGCCTCGGCTAGCAGAAGTGCAGTTTGTCTGTACTGATTCACG-AACGTTTCATATTTTATCAGTTGAAGAACCTGAATCCTGTATCTATCTGTTAAAAATATCTACTCCAAGTTTATGCGGAAATTCACATTTCGCCGCTCAGTTCTCAACCAAGCCACATGATATTACTTGTCACCCAACTCTCAGCGGACCAGATTACTATCGCTATGATGCTCTAAATAAAGCAAGAAATCCAGTTCTTCAGTCGTCCGTAGCTAATATGTCTCATAC-TTTGAGTTTGCCTTCGAAGCGTCTATTTACCTACAAAAATATGTATAATAAAATTCGTAACAACCGACGCAGGCGCAAATTAAAATCTCCCAAGCGCTCGACCGG]

[+] EMBL CD162397             [TTAGTTGCGTTGTTGCGTTGCGTGCACCTATGTGCAAGTATTTCCTAGCTTATTATGTACTTTGTTTCGCCATCTCTGTCTCTCCATTACTATCAAAAGAAAGCACCAAATACAACCTTTTTATCGAGGAACGTGCGGTTCTTGATAAGTTGAATGATGCTGGAGTTAATGTATTTTCAAAGTCTGGTCAGAAGTTCTCCTGTTCATGGGGTACAGACAGTGGTGCAGAACCTAATAACGCCACTTCACAATTGTCTAGCAGCGTCATACATTCACTGCTGTCCATG TTTAGTGGGTTTGATTGTCTAAGAGTG AAAAAAGGTTGGTGGACATACGAG  TTTTGTTTCCGAAAGTATGTTGTTCAGTATCACGATGAATCTAAGGAAACATCTAAAACTTTACTCGGGATTTTTGAGTCGGAATTCGACTGGGACAATTCTACAGAGAAACCCANATACCATAGCCAGTTNTATTCAAATGGAAGTATATGTGACTTGACANATATGCCTC                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD194800             [                             ATGTGCAAGTATTTCCTAGCTTATTATGTACTTTGTTTCGCCATCTCTGTCTCTCCATTACTATCAAAAGAAAGCACCAAATACAACCTTTTTATCGAGGAACGTGCGGTTCTTGATAAGTTGAATGATGCTGGAGTTAATGTATTTTCAAAGTCTGGTCAGAAGTTCTCCTGTTCATGGGGTACAGACAGTGGTGCAGAACCTAATAACGCCACTTCACAATTGTCTAGCAGCGTCGTACATTCACTGCTGTCCATG TTTAGTGGGTTTGATTGTCTAAGAGTG AAAAAAGGTTGGTGGACATACGAG  TTTTGTTTCCGAAAGTGTGTTGTTCAGTATCACGATGAATCTAAGGAAACATCTAAAACTTTACTCGGGATTTTTGAGTCGGAATTCGACTGGGACAATTCTACAGAGAAACCCAAATACCATAGCCAGTTNTATTCAAATGGAAGTATATGTGACTTGACAAATATGCCTCGGCTAGCAGAAGTGCAGGTTGTCTGTACTGATTCACGAAACG TTCATATTTTATCATTTGAAGAACCTGAATCCTGTATCTATCTGTT AAAATATCTACTACATGTTTATGCAGGAATTCACA                                                                                                                                                                                                                                                       ]
[+] EMBL CD157732             [                                                     TATGTACTTTGTTTCGCCATCTCTGTCTCTCCATTACTATCAAAAGAAAGCACCAAATACAACCTTTTTATCGAGGAACGTGCGGTTCTTGATAAGTTGAATGATGCTGGAGTTAATGTATTTTCAAAGTCTGGTCAGAAGTTCTCCTGTTCATGGGGTACAGACAGTGGTGCAGAACCTAATAACGCCACTTCACAATTGTCTAGCAGCGTCGTACATTCACTGCTGTCCATG TTTAGTGGGTTTGATTGTCTAAGAGTG AAAAAAGGTTGGTGGACATACGAG  TTTTGTTTCCGAAAGTATGTTGTTCAGTATCACGATGAATCTAAGG AACATCTAANACTTa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD127236             [                                                                                                                                                                                                               GGGGTACAGACAGTGGTGCAGAACCTAATAACGCCACTTCACAATTGTCTAGCAGCGTCGTACATTCACTGCTGTCCATG TTTATTGGGTTTGATTGTCTAAGAGTGAAAAAAAGGTTGGTGGACATACGAG  TTTTGTTTCCGAAAGTATGTTGTTCAGTATCACGATGAATCTAAGGAAACATCTAAAACTTTACTCGGGATTTTTGAGTCGGAATTCGACTGGGACAATTCTACAGAGAAACCCAAATACCATAGCCAGTTTTATTCAAATGGAAGTATATGTGACTTGACAAATATGCCTCGGCTAGCAGAAGTGCAGTTTGTCTGTACTGATTCACG AACGTTTCATATTTTATCAGTTGAAGAACCTGAATCCTGTATCTATCTGTTAAAAATATCTACTCCAAGTTTATGCGGAAATTCACATTTCGCCGCTCAGTTCTCAACCAAGCCACATGATATTACTTGTCACCCAACTCTCAGCGGACCAGATTACTGTCGCTATGATGCTCTAAATAAAGCAAGAAATCCAGTTCTTCAGTCGTCCGTAGCTAATATGTCTCATACTTTTGAGTTTGCCCTCGAA                                                                                       ]
[+] EMBL CD144699             [                                                                                                                                                                                                                                          ATAACGCCACTTCACAATTGTCTAGCAGCGTCGTGCATTCACTGCTGTCCATG TTTAGTGGGTTTGATTGTCTAAGAGTG AAAAAAGGTTGGTGGACATGCGAG  TTTTGTTTCCGAAAGTATGTTGTTCAGTATCACGATGAATCTAAGGAAACATCTAAAACTTTACTCGGGATTTTTGAGTCGGAATTCGACTGGGACAATTCTACAGAGAAACCCAAATACCATAGCCAGTTTTATTCAAATGGAAGTATATGTGACTTGACAAATATGCCTCGGCTAGCAGAAGTGCAGTTTGTCTGTACTGATTCACG AACGTTTCATATTTTATCAGTTGAAGAACCTGAATCCTGTATCTATCTGTTAAAAATATCTACTCCAAGTTTATGCGGAAATTCACATTTCGCCGCTCAGTTCTCAACCA                                                                                                                                                                                                                                ]
[+] EMBL CD071847             [                                                                                                                                                                                                                                          ATAACTTTCCCTCACAATTGGATATAAGCGTCGTACATTCACTGCTGTCCATG TTTAGTGGGTTTGATTGTCTAAGAGTG AAAAAAGGTTGGTGGACATACGGG  TTTTGTTTCCGAAAGTATGTTGTTCAGTATCACGATGAATCTAAGGAAACATCTAAAACTTTACTCGGGATTTTTGAGTCGGAATTCGACTGGGACAATTCTACAGAGAAACCCAGATACCATAGCCAGTTTTATTCAAATGGAAGTATATGTGACTTGACAAATATGCCTCGGCTAGCAGAAGTGCAGTTTGTCTGTACTGATTCACG AACGTTTCATATTTTATCAGTTGAAGAACCTGAATCCTGTATCTATCTGTTAAAAATATCTACTCCAAGTTTATGCGGAAATTCA                                                                                                                                                                                                                                                         ]
[+] EMBL CD114526             [                                                                                                                                                                                                                                          ATAACGCCACTTCACAATTGTCTAGCAGCGTCATACATTCACTGCTGTCCATG TTTAGTGGGTTTGATTGTCTAAGAGTG AAAAAAGGTTGGTGGACATACGAG  TTTTGTTTCCGAAAGTATGTTGTTCAGTATCACGATGAATCTAAGGAAACATCTAAAACTTTACTCGGGATTTTTGAGTCGGAGTTCGACTGGGACAATTCTACAGAGAAACCCAAATACCATAGCCAGTTTTATTCAAATGGAAGTATATGTGACTTGACAAATATGCCTCGGCTAGCAGAAGTGCAGTTTGTCTGTACTGATTCACG AACGTTTCATATTTTATCAGTTGAAGAACCTGAATCCTGTATCTATCTGTTAAAAATATCTACTCCAAGTTTATGCGGAAATTCACATTTCGCCGCTCAGTTCTCTACCA                                                                                                                                                                                                                                ]
[-] EMBL CD114480             [                                                                                                                                                                                                                                           TAACGCCACTTCACAATTGTCTAGCAGCGTCGTACATTCACTGCTGTCCATG TTTAGTGGGTTTGATTGTCTAAGAGTG AAAAAAGGTTGGTGGACATACGAG  TTTTGTTTCCGAAAGTATGTTGTTCAGTATCACGATGAATCTAAGGAAACATCTAAAACTTTACTCGGGATTTTTGAGTCGGAATTCGACTGGGACAATTCTACAGAGAAACCCAAATACCATAGCCAGTTTTATTCAAATGGAAGTATATGTGACTTGACAAATATGCCTCGGCTAGCAGAAGTGCAGTTTGTCTGTACTGATTCACG AACGTTTCATATTTTATCAGTTGAAGAACCTGAATCCTGTATCTATCTGTTAAAAATATCTACTCCAAGTTTATGCGGAAATTCACATTTCGCCGCTCAGTTCTCAACCAA                                                                                                                                                                                                                               ]
[-] EMBL CD088292             [                                                                                                                                                                                                                                           TAACGCCACTTCACAATTGTCTAGCAGCGTCGTACATTCACTGCTGTCCATG TTTAGTGGGTTTGATTGTCTAAGAGTG AGAAAAGGTTGGTGGACATACGAG  TTTTGTTTCCGAAAGTATGTTGTTCAGTATCACGATGAATCTAAGGAAACATCTAAAACTTTACTCGGGATTTTTGAGTCGGAATTCGACTGGGACAATTCTACAGAGAAACCCAAATACCATAGCCAGTTTTATTCAAATGGAAGTATATGTGACTTGACAAATATGCCTCGGCTAGCAGAAGTGCAGTTTGTCTGTACTGATTCACG AACGTTTCATATTTTATCAGTTGAAGAACCTGAATCCTGTATCTATCTGTTAAAAATATCTACTCCAAGTTTATGCGGAAATTCACATTTCGCCGCTCAGTTCTCAACCAA                                                                                                                                                                                                                               ]
[-] EMBL CD114594             [                                                                                                                                                                                                                                           cgcCGCC CATAACAATTGTCCAGCAGCGTCATACATTCACTGCAGACCATGATTAAGTGGGATTGATTGTATAAGA    AAAAAAGGTTGGTGGACATACGAG  TTTTGTTTCCGAAAGTATGTTGTTCAGTATCACGATGAATCTAAGGAAACATCTAAAACTTTACTCGGGATTTTTGAGTCGGAATTCGACTGGGACAATTCTACAGAGAAACCCAAATACCATAGCCAGTTTTATTCAAATGGAAGTATATGTGACTTGACAAACATGCCTCGGCTAGCAGAAGTGCAGTTTGTCTGTACTGATTCACG AACGTTTCATATTTTATCAGTTGAAGAACCTGAATCCTGTATCTATCTGTTAAAAATATCTACTCCAAGTTTATGCGGAAATTCACATTTCGCCGCTCAGTTCTCAACCAA                                                                                                                                                                                                                               ]
[+] EMBL CD127609             [                                                                                                                                                                                                                                                                                                                                  GGTAGGTGGACATACGAGTTTTTTGTTTCCGAAAGTATGTTGTTCAGCCTCACGATGAATCTAAGGAAACATCTAAAACTTTACTCGGGATTTTTGAGTCGGAATTCGACTGGGACAATTCTACAGAGAAACCCAAATACCATAGCCAGTTTTATTCAAATGGAAGTATATGTGACTTGACAAATATGCCTCGGCTAGCAGAAGTGCAGTTTGTCTGTACTGATTCACG AACGTTTCATATTTTATCAGTTGAAGAACCTGAATCCTGTATCTATCTGTTAAAAATATCTACTCCAAGTTTATGCGGAAATTCACATTTCGCCGCTCAGTTCTCAACCAAGCCACATGATATTACTTGTCACCCAACTCTCAGCGGACCAGATTACTATCGCTATGATGCTCTAAATAAAGCAGGAAATCCAGTTCTTCAGTCGTCCGTAGCTAATATGTCTCATAC TTTGAGTTTGCCTTCGAA                                                                                       ]
[+] EMBL CD127255             [                                                                                                                                                                                                                                                                                                                          agagcaataGTAGGTGGACATACGAG  TTTTGTTTCCGAAAGT TGTTGTTCAGCCTCACGATGAATCTAAGGAAACATCTAAAACTTTACTCGGGATTTTTGAGTCGGAATTCGACTGGGACAATTCTACAGAGAAACCCAAATACCATAGCCAGTTTTATTCAAATGGAAGTATATGTGACTTGACAAATATGCCTCGGCTAGCAGAAGTGCAGTTTGTCTGTACTGATTCACG AACGTTTCATATTTTATCAGTTGAAGAACCTGAATCCTGTATCTATCTGTTAAAAATATCTACTCCAAGTTTATGCGGAAATTCACATTTCGCCGCTCAGTTCTCAACCAAGCCACATGATATTACTTGTCACCCAACTCTCAGCGGACCAGATTACTATCGCTATGATGCTCTAAATAAAGCAAGAAATCCAGTTCTTCAGTCGTCCGTAGCTAATATGTCTCATAC TTTGAGTTTGCCTTCGAA                                                                                       ]
[+] EMBL CD127111             [                                                                                                                                                                                                                                                                                                                                                  AG  TTTTGTTTCCGAAAGTATGTTGTTCAGTATCACGATGAATCTAAGGAAACATCTAAAACTTTACTCGGGATTTTTGAGTCGGAATTCGACTGGGACAATTCTACAGAGAAACCCAAATACCATAGCCAGTTTTATTCAAATGGAAGTATATGTGACTTGACAAATATGCCTCGGCTAGCAGAAGTGCAGTTTGTCTGTACTGATTCACG AACGTTTCATATTTTATCAGTTGAAGAACCTGAATCCTGTATCTATCTGTTAAAAATATCTACTCCAAGTTTATGCGGAAATTCACATTTCGCCGCTCAGTTCTCAACCAAGCCACATGATATTACTTGTCACCCAACTCTCAGCGGACCAGATTACTATCGCTATGATGCTCTAAATAAAGCAAGAAATCCAGTTCTTCAGTCGTCCGTAGCTAATATGTCTCATAC TTTGAGTTTGCCTTCGAAGCGTCTATTT                                                                             ]
[-] EMBL CD128035             [                                                                                                                                                                                                                                                                                                                                                   G  TTTTGTTTCCGAAAGTATGTTGTTCAGTATCACGATGAATCTAAGGAAACATCTAAAACTTTACTCGGGATTTTTGAGTCGGAATTCGACTGGGACAATTCTACAGAGAAACCCAAATACCATAGCCAGTTTTATTCAAATGGAAGTATATGTGACTTGACAAATATGCCTCGGCTAGCAGAAGTGCAGTTTGTCTGTACTGATTCACG AACGTTTCATATTTTATCAGTTGAAGAACCTGAATCCTGTATCTATCTGTTAAAAATATCTACTCCAAGTTTATGCGGAAATTCACATTTCGCCGCTCAGTTCTCAACCAAGCCACATGATATTACTTGTCACCCAACTCTCAGCGGACCAGATTACTATCGCTATGATGCTCTAAATAAAGCAAGAAATCCAGTTCTTCAGTCGTCCGTAGCTAAGATGTCTCATAC TTTGAGTTTGCCTTAGAAGCGTCTATTTACCTACtat                                                                    ]
[-] EMBL CD127145             [                                                                                                                                                                                                                                                                                                                                                                                                 AGGAAACATCTAAAACTTTACTCGGGATTTTTGAGTCGGAATTCGACTGGGACAATTCTACAGAGAAACCCAAATACCATAGCCAGTTTTATTCAAATGGAAGTATATGTGACTTGACAAATATGCCTCGGCTAGCAGAAGTGCAGTTTGTCTGTACTGATTCACG AACGTTTCATATTTTATCAGTTGAAGAACCTGAATCCTGTATCTATCTGTTAAAAATATCTACTCCAAGTTTATGCGGAAATTCACATTTCGCCGCTCAGTTCTCAACCAAGCCACATGATATTACTTGTCACCCAACTCTCAGCGGACCAGATTACTATCGCTATGATGCTCTAAATAAAGCAAGAAATCCAGTTCTTCAGTCGTCCGTAGCTAATATGTCTCATAC TTTGAGTTTGCCTTCGAAG                                                                                      ]
[+] EMBL CD136530             [                                                                                                                                                                                                                                                                                                                                                                                                                                               CTGGGACAATTCTACAGAGAAACCCAAATACCATAGCCAGTTTTATTCAAATGGAAGTATATGTGACTTGACAAATATGCCTCGGCTAGCAGAAGTGCAGTTTGTCTGTACTGATTCACG AACGTTTCATATTTTATCAGTTGAAGAACCTGAATCCTGTATCTATCTGTTAAAAATATCTACTCCAAGTTTATGCGGAAATTCACATTTCGCCGCTCAGTTCTCAACCAAGCCACATGATATTACTTGTCACCCAACTCTCAGCGGACCAGATTACTATCGCTATGATGCTCTAAATAAAGCAAGAAATCCAGTTCTTCAGTCGTCCGTAGCTAATATGTCTC                                                                                                              ]
[+] EMBL CD117955             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AAGTATATGTGACTTGACAAATATGCCTCGGCTAGCACAAGTGCAGTTTGTCTGTACTGATTCACG AACGTTTCATATTTTATCAGTTGAAGAACCTGAATCCTGTATCTATCTGTTAAAAATATCTACTCCAAGTTTATGCGGAAATTCACATTTCGCCGCTCAGTTCTCAACCAAGCCACATGATATTACTTGTCACCCAACTCTCAGCGGACCAGATTACTATCGCTATGATGCTCTAAATAAAGCAAGAAATCCAGGTCTTCAGTCGTCCGTAGCTAATATGTCTCATAC TTTGAGTTTGCCTTCGAAGCGTCTATTTACCTACAAAAATATGTATAATAAAATTCGTAACAACCGACGCAGGCGCAAATTAAAATCTCCCAAGCGCTCGACCGG]
[+] EMBL CD098281             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CCGCTCAGTTCTCAACCAAGCCACATGATATTACTTGTCACCCAACTCTCAGCGGACCAGATTACCATCGCTATGATGCTCTAAATAAAGCAAGAAATCCAGTTCTTCAGTCGTCCGTAGCTNATATGTCTCATAC TTTGAGTTTGCCTTCGAAGCGTCTATTTACCTACAAAAATATGTATAATAAAATTCGTAACAACCGACGCAGGCGCAAATTAAAATCTC                ]


>consensus_10795#0 TTAGTTGCGTTGTTGCGTTGCGTGCACCTATGTGCAAGTATTTCCTAGCTTATTATGTAC TTTGTTTCGCCATCTCTGTCTCTCCATTACTATCAAAAGAAAGCACCAAATACAACCTTT TTATCGAGGAACGTGCGGTTCTTGATAAGTTGAATGATGCTGGAGTTAATGTATTTTCAA AGTCTGGTCAGAAGTTCTCCTGTTCATGGGGTACAGACAGTGGTGCAGAACCTAATAACG CCACTTCACAATTGTCTAGCAGCGTCGTACATTCACTGCTGTCCATGTTTAGTGGGTTTG ATTGTCTAAGAGTGAAAAAAGGTTGGTGGACATACGAGTTTTGTTTCCGAAAGTATGTTG TTCAGTATCACGATGAATCTAAGGAAACATCTAAAACTTTACTCGGGATTTTTGAGTCGG AATTCGACTGGGACAATTCTACAGAGAAACCCAAATACCATAGCCAGTTTTATTCAAATG GAAGTATATGTGACTTGACAAATATGCCTCGGCTAGCAGAAGTGCAGTTTGTCTGTACTG ATTCACGAACGTTTCATATTTTATCAGTTGAAGAACCTGAATCCTGTATCTATCTGTTAA AAATATCTACTCCAAGTTTATGCGGAAATTCACATTTCGCCGCTCAGTTCTCAACCAAGC CACATGATATTACTTGTCACCCAACTCTCAGCGGACCAGATTACTATCGCTATGATGCTC TAAATAAAGCAAGAAATCCAGTTCTTCAGTCGTCCGTAGCTAATATGTCTCATACTTTGA GTTTGCCTTCGAAGCGTCTATTTACCTACAAAAATATGTATAATAAAATTCGTAACAACC GACGCAGGCGCAAATTAAAATCTCCCAAGCGCTCGACCGG



consensusID : consensus_10795#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 587
fasta sequence
                              [CACTGCTGTCCATGTTTAGTGGGTTTGATTGTATAAGAGTGAAAAAAGATTGGTGCACATACGAGTTTTGTTTCCGAAAGTATGTTGTTCAGTATCACGATGAATCTAAGGAAACATCTAAAACTTTACTCGGGATTTTTGAGTCGGAATTCGACTGGGACAATTCTACAGAGGTACTCCTCTCACTCCATACATTGCCTTATACACTATTCAGAAACCCAAATACCATAGCCAGTTTTATTCAAATGGAAGTATATGTGACTTGACAAATATGCCTCGGCTAGCAGAAGTGCAGTTTGTCTGTACTGATTCACGAACGTTTCATATTTTATCAGTTGAAGAACCTGAATCCTGTATCTATCTGTTAAAAATATCCACTCCAAGTTTATGCGGAAATTCACATTTCGCCGCTCAGTTCTCAACCAAGCCACATGATATTACTTGTCACCCAACTCTCAGCGGACCAGATTACTATCGCTATGATGCTCTAAATAAAGCAAGAAATCCGGTTCTTCAGTCGTCCGTAGCTAATATGTCTCATACTTTGAGTTTGCCTTAGAAGCGTCTATTTACCTACTATGTCACAA]

[-] EMBL CD114296             [CACTGCTGTCCATGTTTAGTGGGTTTGATTGTATAAGAGTGAAAAAAGATTGGTGCACATACGAGTTTTGTTTCCGAAAGTATGTTGTTCAGTATCACGATGAATCTAAGGAAACATCTAAAACTTTACTCGGGATTTTTGAGTCGGAATTCGACTGGGACAATTCTACAGAGGTACTCCTCTCACTCCATACATTGCCTTATACACTATTCAGAAACCCAAATACCATAGCCAGTTTTATTCAAATGGAAGTATATGTGACTTGACAAATATGCCTCGGCTAGCAGAAGTGCAGTTTGTCTGTACTGATTCACGAACGTTTCATATTTTATCAGTTGAAGAACCTGAATCCTGTATCTATCTGTTAAAAATATCCACTCCAAGTTTATGCGCAAATTCACATTTCGCCGCTCAGTTCTCAACCAAG                                                                                                                                                                ]
[-] EMBL CD127537             [                                                                GTTTTGTTTCCGAAAGTATGATGTTCAGTATCACGATGAATCTAAGGAAACATCTAAAACTTTACTCGGGATTTTTGAGTCGGAATTCGACTGGGACAATTCTACAGAGGTACTCCTCTCACTCCATACATTGCCTTATACACTATTCAGAAACCCAAATACCATAGCCAGTTTTATTCAAATGGAAGTATATGTGACTTGACAAATATGCCTCGGCTAGCAGAAGTGCAGTTTGTCTGTACTGATTCACGAACGTTTCATATTTTATCAGTTGAAGAACCTGAATCCTGTATCTATCTGTTAAAAATATCTACTCCAAGTTTATGCGGAAATTCACATTTCGCCGCTCAGTTCTCAACCAAGCCACATGATATTACTTGTCACCCAACTCTCAGCGGACCAGATTACTATCGCTATGATGCTCTAAATAAAGCAAGAAATCCGGTTCTTCAGTCGTCCGTAGCTAATATGTCTCATACTTTGAGTTTGCCTTAGAAGCGTCTATTTACCTACTATGTCACAA]
[-] EMBL CD114401             [                                                                                                                                                                                                                                                                                                                                                TGAAGAACCTGAATCCTGTATCAATCTGTTAAAAATATCGACTCCAAGTTTATGCGGAAATTCACATTTCGCCGCTCAGTTCTCAACCAA                                                                                                                                                                 ]


>consensus_10795#1 CACTGCTGTCCATGTTTAGTGGGTTTGATTGTATAAGAGTGAAAAAAGATTGGTGCACAT ACGAGTTTTGTTTCCGAAAGTATGTTGTTCAGTATCACGATGAATCTAAGGAAACATCTA AAACTTTACTCGGGATTTTTGAGTCGGAATTCGACTGGGACAATTCTACAGAGGTACTCC TCTCACTCCATACATTGCCTTATACACTATTCAGAAACCCAAATACCATAGCCAGTTTTA TTCAAATGGAAGTATATGTGACTTGACAAATATGCCTCGGCTAGCAGAAGTGCAGTTTGT CTGTACTGATTCACGAACGTTTCATATTTTATCAGTTGAAGAACCTGAATCCTGTATCTA TCTGTTAAAAATATCCACTCCAAGTTTATGCGGAAATTCACATTTCGCCGCTCAGTTCTC AACCAAGCCACATGATATTACTTGTCACCCAACTCTCAGCGGACCAGATTACTATCGCTA TGATGCTCTAAATAAAGCAAGAAATCCGGTTCTTCAGTCGTCCGTAGCTAATATGTCTCA TACTTTGAGTTTGCCTTAGAAGCGTCTATTTACCTACTATGTCACAA



consensusID : consensus_10795#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 137
fasta sequence
                              [ACTTGTCAGCCCCCTCTCTTAAAGGGGACAGATTACTATCGCTATGATGCTCTAAATAAAGCAAGAAATCCAGTTCTTCAGTCGTCCGTAGCTAATATGTCTCATACTTTGAGTTTGCCTTCGAAGCGTCTATGTAC]

[-] EMBL CD127334             [ACTTGTCAGCCCCCTCTCTTAAAGGGGACAGATTACTATCGCTATGATGCTCTAAATAAAGCAAGAAATCCAGTTCTTCAGTCGTCCGTAGCTAATATGTCTCATACTTTGAGTTTGCCTTCGAAGCGTCTATGTAC]


>consensus_10795#2 ACTTGTCAGCCCCCTCTCTTAAAGGGGACAGATTACTATCGCTATGATGCTCTAAATAAA GCAAGAAATCCAGTTCTTCAGTCGTCCGTAGCTAATATGTCTCATACTTTGAGTTTGCCT TCGAAGCGTCTATGTAC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10795#0      TTAGTTGCGTTGTTGCGTTGCGTGCACCTATGTGCAAGTATTTCCTAGCTTATTATGTAC 60
consensus_10795#2      ------------------------------------------------------------
consensus_10795#1      ------------------------------------------------------------
                                                                                   

consensus_10795#0      TTTGTTTCGCCATCTCTGTCTCTCCATTACTATCAAAAGAAAGCACCAAATACAACCTTT 120
consensus_10795#2      ------------------------------------------------------------
consensus_10795#1      ------------------------------------------------------------
                                                                                   

consensus_10795#0      TTATCGAGGAACGTGCGGTTCTTGATAAGTTGAATGATGCTGGAGTTAATGTATTTTCAA 180
consensus_10795#2      ------------------------------------------------------------
consensus_10795#1      ------------------------------------------------------------
                                                                                   

consensus_10795#0      AGTCTGGTCAGAAGTTCTCCTGTTCATGGGGTACAGACAGTGGTGCAGAACCTAATAACG 240
consensus_10795#2      ------------------------------------------------------------
consensus_10795#1      ------------------------------------------------------------
                                                                                   

consensus_10795#0      CCACTTCACAATTGTCTAGCAGCGTCGTACATTCACTGCTGTCCATGTTTAGTGGGTTTG 300
consensus_10795#2      ------------------------------------------------------------
consensus_10795#1      ---------------------------------CACTGCTGTCCATGTTTAGTGGGTTTG 27
                                                                                   

consensus_10795#0      ATTGTCTAAGAGTGAAAAAAGGTTGGTGGACATACGAGTTTTGTTTCCGAAAGTATGTTG 360
consensus_10795#2      ------------------------------------------------------------
consensus_10795#1      ATTGTATAAGAGTGAAAAAAGATTGGTGCACATACGAGTTTTGTTTCCGAAAGTATGTTG 87
                                                                                   

consensus_10795#0      TTCAGTATCACGATGAATCTAAGGAAACATCTAAAACTTTACTCGGGATTTTTGAGTCGG 420
consensus_10795#2      ------------------------------------------------------------
consensus_10795#1      TTCAGTATCACGATGAATCTAAGGAAACATCTAAAACTTTACTCGGGATTTTTGAGTCGG 147
                                                                                   

consensus_10795#0      AATTCGACTGGGACAATTCTACAGAG---------------------------------- 446
consensus_10795#2      ------------------------------------------------------------
consensus_10795#1      AATTCGACTGGGACAATTCTACAGAGGTACTCCTCTCACTCCATACATTGCCTTATACAC 207
                                                                                   

consensus_10795#0      -------AAACCCAAATACCATAGCCAGTTTTATTCAAATGGAAGTATATGTGACTTGAC 499
consensus_10795#2      ------------------------------------------------------------
consensus_10795#1      TATTCAGAAACCCAAATACCATAGCCAGTTTTATTCAAATGGAAGTATATGTGACTTGAC 267
                                                                                   

consensus_10795#0      AAATATGCCTCGGCTAGCAGAAGTGCAGTTTGTCTGTACTGATTCACGAACGTTTCATAT 559
consensus_10795#2      ------------------------------------------------------------
consensus_10795#1      AAATATGCCTCGGCTAGCAGAAGTGCAGTTTGTCTGTACTGATTCACGAACGTTTCATAT 327
                                                                                   

consensus_10795#0      TTTATCAGTTGAAGAACCTGAATCCTGTATCTATCTGTTAAAAATATCTACTCCAAGTTT 619
consensus_10795#2      ------------------------------------------------------------
consensus_10795#1      TTTATCAGTTGAAGAACCTGAATCCTGTATCTATCTGTTAAAAATATCCACTCCAAGTTT 387
                                                                                   

consensus_10795#0      ATGCGGAAATTCACATTTCGCCGCTCAGTTCTCAACCAAGCCACATGATATTACTTGTCA 679
consensus_10795#2      ----------------------------------------------------ACTTGTCA 8
consensus_10795#1      ATGCGGAAATTCACATTTCGCCGCTCAGTTCTCAACCAAGCCACATGATATTACTTGTCA 447
                                                                           ********

consensus_10795#0      CCCAACTCTC---AGCGGACCAGATTACTATCGCTATGATGCTCTAAATAAAGCAAGAAA 736
consensus_10795#2      GCCCCCTCTCTTAAAGGGGACAGATTACTATCGCTATGATGCTCTAAATAAAGCAAGAAA 68
consensus_10795#1      CCCAACTCTC---AGCGGACCAGATTACTATCGCTATGATGCTCTAAATAAAGCAAGAAA 504
                        **  *****   *  **  ****************************************

consensus_10795#0      TCCAGTTCTTCAGTCGTCCGTAGCTAATATGTCTCATACTTTGAGTTTGCCTTCGAAGCG 796
consensus_10795#2      TCCAGTTCTTCAGTCGTCCGTAGCTAATATGTCTCATACTTTGAGTTTGCCTTCGAAGCG 128
consensus_10795#1      TCCGGTTCTTCAGTCGTCCGTAGCTAATATGTCTCATACTTTGAGTTTGCCTTAGAAGCG 564
                       *** ************************************************* ******

consensus_10795#0      TCTATTTACCTACAAAAATATGTATAATAAAATTCGTAACAACCGACGCAGGCGCAAATT 856
consensus_10795#2      TCTATGTAC--------------------------------------------------- 137
consensus_10795#1      TCTATTTACCTACTATGTCACAA------------------------------------- 587
                       ***** ***                                                   

consensus_10795#0      AAAATCTCCCAAGCGCTCGACCGG 880
consensus_10795#2      ------------------------
consensus_10795#1      ------------------------
                                               




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)