These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10813#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 873 fasta sequence [TGTCGTGTTACGCTTAATCAAAGCCGTCATCACCACCTCCAGCCGTTTCAAGACCCAATGATAGTGGAGCTACGAGGAATTAAGTTCATAAATCAATTTTAGCGATAACCGGTGTAATATTGACTCATTGCTGGCGGAGCGGCAGCAGTTGGGACCCCACCTGGAGGAGCACCGCCAACTGGGATAGTACCATACCCAGATGGATAAGTAGAATACCCAGGGTAATAGCTTGCATAAGGATTTGCGGCTGGTGTCTGTGGTGTTACTGTTGCGGTTGGAGCACTTGGGACGCTGCTGGATACACTACCAGACACAGCCGAAGGTTGCTGCTGTTGTTGCCACGCGTTAAACTGTTGTGCAGCAGCCATCGCTGCATCGTACTTCCCAGCTCCTTGAGTACTTCCAGTAGCACTTTGGGGAGCACCATAGTAATAGGAGGCATAAGCTGCTGCAGCCGGCGTCGAATGGTCAGATGTGGCAGTAGTGGTGGTGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGAGCGAAGACGGTGGTGTTGGTTTGGCGATTGAGAGAGTGGACTGTGAAGAGGTGTAGTTGTATCGAGAGATGTGAGCGAGCGAGTGTATTTTTGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGCGGCGGTGGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAAGAGCGAAGACGGTGGTGTTGATTTGGCGATTGATAGAGTGGACTGTGAAGAGGTGTAGTTGTATCGAGAGATGTGAGCGAGCGAGTGTATTTTTGAATTGCAGTGTACTGACTATACGGGAGTATAGTTNTTGTGGCGGCGGCTGTTGCCGCGACAAAAGTGGTTGGTT] [-] EMBL CD112225 [TGTCGTGTTACGCTTAATCAAAGCCGTCATCACCACCTCCAGCCGTTTCAAGACCCAATGATAGTGGAGCTACGAGGAATTAAGTTCATAAATCAATTTTAGCGATAACCGGTGTAATATTGACTCATTGCTGGCGGAGCGGCAGCAGTTGGGACCCCACCTGGAGGAGCACCGCCAACTGGGATAGTACCATACCCAGATGGATAAGTAGAATACCCAGGGTAATAGCTTGCATAAGGATTTGCGGCTGGTGTCTGTGGTGTTACTGTTGCGGTTGGAGCACTTGGGACGCTGCTGGATACACTACCAGACACAGCCGAAGGTTGCTGCTGTTGTTGCCACGCGTTAAACTGTTGTGCAGCAGCCATCGCTGCATCGTACTTCCCAGCTCCTTGAGTACTTCCAGTAGCACTTTGGGGAGCACCATAGTAATAGGAGGCATAAGCTGCTGCAcaaca ] [-] EMBL AW016970 [ AGGAATTAAGTTCATAAATCAATTTTAGCGATAACCGGTGTAATATTGACTCATTGCTGGCGGAGCGGCAGCAGTTGGGACCCCACCTGGAGGAGCACCGCCAACTGGGATAGTACCATACCCAGATGGATAAGTAGAATACCCAGGGTAATAGCTTGCATAAGGATTTGCGGCTGGTGTCTGTGGTGTTACTGTTGCGGTTGGAGCACTTGGGACGCTGCTGGATACACTACCAGACACAGCCGAAGGTTGCTGCTGTTGTTGCCACGCGTTAAACTGTTGTGCAGCAGCCATCGCTGCATCGTACTTCCCAGCTCCTTGAGTACTTCCAGTAGCACTTTGGGGAGCACCATAGTAATAGGAGGCATAAGCTGCTGCAGCCGGCGTCGAATGGTCAGATGTGGCAGTAGTGGTGGT ] [-] EMBL CD069072 [ CAGTTGGGACCCCACCTGGAGGAGCACCGCCAACTGGGATAGTACCATACCCAGATGGATAAGTAGAATACCCAGGGTAATAACTTGCATAAGGATTTGCGGCTGGTGTCTGTGGTGTTACTGTTGCGGTAGGAGCACTTGGGACGCTGCTGGATACACTACCAGACACAGCCGAAGGTTGCTGCTGTTGTTGCCACGCGTTAAACTGTTGTGCAGCAGCCATCGCTGCATCGTACTTCCCAGCTCCTTGAGTACTTCCAGTAGCACTTTGGGCAGCA ] [+] EMBL CD144579 [ TTGGGACCCCACCTGGAGGAGCACCGCCAACTGGGATAGTACCATACCCAGATGGATAAGTAGAATACCCAGGGTAATAGCTTGCATAAGGATTTGCGGCTGGTGTCTGTGGTGTTACTGTTGCGGTTGGAGCACTTGGGACGCTGCTGGATACACTACCAGGCACAGCCGAAGGTTGCTGCTGTTGTTGCCACGCGTTAAACTGTTGTGCAGCAGCCATCGCTGCATCGTACTTCCCAGCTCCTTGAGTACTTCCAGTAGTACTTTGGGGAGCACCATAGTAATAGGAGGCATAAGCTGCTGCAGCCGGCGTCGAATGGTCAGATGTGGCAGTAGT ] [-] EMBL CD144563 [ TGGGACCCCACCTGGAGGAGCACCGCCAACTGGGATAGTACCATACCCAGATGGATAAGTAGAATACCCAGGGTAATAGCTTGCATAAGGATTTGCGGCTGGTGTCTGTGGTGTTACTGTTGCGGTTGGAGCACTTGGGACGCTGCTGGATACACTACCAGACACAGCCGAAGGTTGCTGCTGTTGTTGCCACGCGTTAAACTGTTGTGCAGCAGCCATCGCTGCATCGTACTTCCCAGCTCCTTGAGTACTTCCAGTAGCACTTTGGGGAGCACCATAGTAATAGGAGGCATAAGCTGCTGCAGCCGGCGTCGAATGGTCAGATGTGGCAGTAGTG ] [-] EMBL CD139050 [ GGTGTTACTGTTGCGGTTGGAGCACTTGTGACGCTGCTGGATACACTACCAGACACAGCCGAAGGTTGCTGCTGCTGTTGCCACGCGTTAAACTGTTGTGCAGCAGCCATCGCTGCATCGTACTTCCCAGCTCCTTGAGTACTTCCAGTAGCACTTTGGGGAGCACCATAGTAATAGGGGGCATAAGCTGCTGCAGCCGGCGTCGAATGG ] [+] EMBL CD145549 [ CATCGCTGCATCGTACTTCCCAGCTCCTTGAGTACTTCCAGTAGCACTTTGGGGAGCACCATAGTAATAGGAGGCATAAGCTGCTGCAGCCGGCGTCGAATGGTCAGATGTGGCAGTAGTGGTGGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGAGCGAAGACGGTGGTGTTGGTTTGGCGATTGAGAGAGTGGACTGTGAAGAGGTGTAGTTGTATCGAGAGATGTGAGCGAGCGAGTGTATTTTTGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGCGGCGGTGGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAAGAGCGAAGACGGTGGTGTTGATTTGGCGATTGATAGAGTGGACTGTGAAGAGGTGTAGTTGTATCGAGAGATGTGAGCGAGCGAGTGTATTTTTGAATTGCAGTGTACTGACTATACGGGAGTATAGTTNTTGTGGCGGCGGCTGTTGCCGCGACAAAAGTGGTTGGTT] consensusID : consensus_10813#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 633 fasta sequence [ACAGGAGGAGGTGTAGTTGTATCGAGAGATGTGAGCGAGCGAGTGTATTTTTGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGCGGCGGTGGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGTGAGTTGACGGGTGTTTGTGTGATGTGTGTCGATAGGCGTTGCGATGTAATTTGATTTGAGTTGTGTAGATGTGTTTGCAGATGGTTTGATTGTTTGATTGTTGATTTTCGCAGTGTATTTTGGTGTTGGTGTTGTTGTTGTTGTTGTTGTTATGTGAATGTTGAATAGTTGATATTAGTTTCATGATGAATTGTCCATACATTCGCGGTTTCCACTGACTCGAGAATTGATGTTGTTCTCCGTCACTTGGATGTCTGACTTTTGTGTTTGTGTTTGTGCGTGTGTGTTTATTGTGACGAGTTAGTGATATGTTGTTTTTGTGTTTAATTTGTTTATTTTGTAGGAGCGAAGACGGTGGTGTTGGTTTGGCGATGGAGAGAGTGGACTGTGAAGAGGTGTAGTTGTA-CCGAGAGATG-TGA-GCGAGCGAG-T-GTATTTTTGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGCGGCGGTGGC] [+] EMBL CD085933 [ACAGGAGGAGGTGTAGTTGTATCGAGAGATGTGAGCGAGCGAGTGTATTTTTGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGCGGCGGTGGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGTGAGTTGACGGGTGTTTGTGTGATGTGTGTCGCTCGGCGTTGCGATGTAATTTGATTTGAGTTGCGTNGATGTGTTTGC ] [+] EMBL CD085946 [ACAGGAGGAGGTGTAGTTGTATCGAGAGATGTGAGCGAGCGAGTGTATTTTTGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGCGGCGGTGGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGTGAGTTGACGGGTGTTTGTGTGATGTGTGTCGATAGGCGTTGCGATGTAATTTGATTTGAGTTGTGTAGATGTGTTTGCAGATGGTTTGATTGTTTGATTGTTGATTTTCGCAGTGTATTTTGGTGTTGGTGTTGTTGTTGTTGTTGTTGTTATGTGAATGTTGAATAGTTGATATTAGTTTCATGATGAATTGTCCATACATTCGCGGTTTCCACTGACTCGAGAATTGATGTTGTTCTCCGTCACTTGGATGTCTGACTTTTGTGTTTGTGTTCGTGCGTGTGTGTTTATTGTGACGAGTTANTGATATGTTGTTTTTGTGTTTAATTTGTTTATTTTGTACGAG ] [+] EMBL CD085918 [cCAGGAGGAGGTGTAGTTGTATCGAGAGATGTGAGCGAGCGAGTGTATTTTTGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGCGGCGGTGGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGTGAGTTGACGGGTGTTTGTGCGATGTGTGTCGATAGGCGTTGCGATGTAATTTGATTTGAGTTGTGTAGATGTGTTTGCAGATGGTTTGATTGTTTGATTGTTGATTTTCGCAGTGTATTTTGGTGTTGGTGTTGTTGTTGTTGTTGTTGTTATGTGAATGTTGAATAGTTGATATTAGTTTCATGATGAATTGTCCATACATTCGCGGTTTCCACTGACTCGAGAATTGATGTTGTTCTCCGTCACTTGGATGTCTGACTTTTGTGTTTGTGTTTGTGCGTGTGTGTCTATTGTGACGAGTTAGTGATATGTTGTTCTTG ] [+] EMBL CD085953 [ GTATCGAGAGATGTGAGCGAGCGAGTGTATTTTTGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGCGGCGGTGGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGTGAGTTGACGGGTGTTTGTGTGATGTGTGTCGATAGGCGTTGCGATGTAATTTGATTTGAGTTGTGTAGATGTGTTTGCAGATGGTTTGATTGTTTGATTGTTGATTTTCGCAGTGTATTTTGGTGTTGGTGTTGTTGTTGTTGTTGTTGTTATGTGAATGTTGAATAGTTGATATTAGTTTCATGATGAATTGTCCATACATTCGCGGCTTCCACTGACTCGAGAATTGATGTTGTTCTCCGTCTCTTGGATGTCTGACT ] [+] EMBL CD113613 [ TTTTTGTGGCGGCGGCGGTGGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGTGAGTTGACGGGTGTTTGTGTGATGTGTGTCGATAGGCGTTGCGATGTGATTTGATTTGAGTTGTGTAGATGTGTTTGCA ] [+] EMBL CD155167 [ GTGGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGTGAGTTGACGGGTGTTTGTGTGGTGTGTGTCGATAGGCGTTGCGATGTGATTTGATTTGAGTTGTGTAGATGTGTTTGCAGATGGTTTGATTGTTTGATTGTTGATTTTCGCAGTGTATTTTGGTGTTGGTGTTGTTGTTGTTGTTGTTGTTATGTGAATGTTGAATAGTTGATATTAGTTTCATGATGAATTGTCCATACATTCGCGGTTTCCACTGACTCGAGAATTGATGTTGTTCCCCGTCACTTGGATGTCTGACTTTTGTGTTTGTGTTTGTGCGTGTGTGTTTATTGTGACGAGTTAGTGATATGTTGTTTTTGTGTTTAATTTGTTTATTTTGTAGGAGCGAAGACGGTGGTGTTGGTTTGGCGATGGAGAGAGTGGACTGTGAAGAGGTGTAGTTGTA CCGAGAGATG TGA GCGAGCGAG T GTATTTTTGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGCGGCGGTGGC] [-] EMBL CD094185 [ TGTCGATAGGCGTTGCGATGTGATTTGATTTGAGTTGTGTAGATGTGTTTGCAGATGGTTTGATTGTTTGATTGTTGATTTTCGCAGTGTATTTTGGTGTTGGTGTTGTTGTTGTTGTT ] [-] EMBL CD151613 [ GTTTGTGTTTGGGCGTGTGTGTTTATTGTGACGAGTTAGTGATATGTTGTTTTTGTGTTTAATTTGTTTATTTTGTAGGAGCGAAGACGGTGGTGTTGGTTTGGCGATGGAGAGAGTGGACTGTGAAGAGGTGTAATTGTATTCGAACGAAGATGACGC AGC AGCTAGT TTTTTTAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTG ] consensusID : consensus_10813#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 466 fasta sequence [ATGTGAGCGAGCGAGTGTATTTTTGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGAGCGAAGACGGTGGTGTTGGTTTGGCGATGGAGAGAGTGGACTGTGAAGAGGTGTAGTTGTATCGAGAGATGTGAGCGAGCGAGTGTATTTTTGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGCGGCGGTGGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGAGCGAAGACGGTGGTGTTGGTTTGGCGATGGAGAGAGTGGACTGTGAAGAGGTGTAGTTGTATCGAGAGATGTGAGCGAGCGAGTGTATTTTTGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGAGCGAAGACGGTGGTG] [-] EMBL CD133392 [ATGTGAGCGAGCGAGTGTATTTTTGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGAGCGAAGACGGTGGTGTTGGTTTGGCGATGGAGAGAGTGGACTGTGAAGAGGTGTAGTTGTATCGAGAGATGTGAGCGAGCGAGTGTATTTTTGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGCGGCGGTGGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGAGCGAAGACGGTGGTGTTGGTTTGGCGATGGAGAGAGTGGACTGTGAAGAGGTGTAGTTGTATCGAGAGATGTGAGCGAGCGAGTGTATTTTTGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGAGCGAAGACGGTGGTG] consensusID : consensus_10813#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 441 fasta sequence [GGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGAGCGAAGACGGTGGTGTTGGTTTGGCGATGGAGAGAGTGGACTGTGAAGAGGTGTAGTTGTATCGAGAAACATGAGTCTAGCTATTGGTATTGACTTGGGAACTACATATTCCTGCGTCGGCATTTTCATGAACGAGAACGTCGAGATCATCAGCAACGAGCAGGGTAACAGAACTACCCCCTCCTATGTTGCTTTTACCGACACTGAAAGACTGATCGGTGAAGCCGCCAAGAACCAGGTTGAACGCAACCCTGAAAACACTGTTTTCGATGCCAAACGTCTGATCGGTCGCAAGTTCAACGATAAGGAGGTTCAGAGCGATATGAAGCACTGGCCCTTCAAGGTCGTCGACGGATCTGATGGAAAGCCAATGATCGTCGTCAAGTTCAAAGGTCAGGAAGAGA] [+] EMBL CD093890 [GGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGAGCGAAGACGGTGGTGTTGGTTTGGCGATGGAGAGAGTGGACTGTGAAGAGGTGTAGTTGTATCGAGAAACATGAGTCTAGCTATTGGTATTGACTTGGGAACTACATATTCCTGCGTCGGCATTTTCATGAACGAGAACGTCGAGATCATCAGCAACGAGCAGGGTAACAGAACTACCCCCTCCTATGTTGCTTTTACCGACACTGAAAGACTGATCGGTGAAGCCGCCAAGAACCAGGTTGAACGCAACCCTGAAAACACTGTTTTCGATGCCAAACGTCTGATCGGTCGCAAGTTCAACGATAAGGAGGTTCAGAGCGATATGAAGCACTGGCCCTTCAAGGTCGTCGACGGATCTGATGGAAAGCCAATGATCGTCGTCAAGTTCAAAGGTCAGGAAGAGA] [+] EMBL CD093891 [GGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGAGCGAAGACGGTGGTGTTGGTTTGGCGATGGAGAGAGTGGACTGTGAAGAGGTGTAGTTGTATCGAGAAACATGAGTCTAGCTATTGGTATTGACTTGGGAACTACATATTCCTGCGTCGGCATTTTCATGAACGAGAACGTCGAGATCATCAGCAACGAGCAGGGTAACAGAACTACCCCCTCCTATGTTGCTTTTACCGACACTGAAAGACTGATCGGTGAAGCCGCCAAGAACCAGGTTGAACGCAACCCTGAAAACACTGTTTTCGATGCCAAACGTCTGATCGGTCGCAAGTTCAACGATCAGGAGGTTCAGAGCGATATGAAGCACTGGCCCTTCAAGGTCGTCGACGGATCTGATGGAAAGCCAATGATCGTCGT ] consensusID : consensus_10813#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 351 fasta sequence [GAATATGATGTATTACGAGGAATTAAGTTCATAAATCAATTTTAGCGATAACCGGTGTAATATTGACTCATTGCTGGCGGAGCGGCAGCAGTTGGGACCCCACCTGGAGGAGCACCGCCAACTGGGATAGTACCATACCCAGATGGATAAGTAGAATACCCAGGGTAATAGCTTGCATAAGGATTTGCGGCTGGTGTCTGTGGTGTTACTGTTGCGGTTGGAGCACTTGGGACGCTGCTGGATACACTACCAGACACAGCCGAAGGTTGCTGCTGTTGTTGCCACGCGTTAAACTGTTGTGCAGCAGCCATCGCTGCATC-GTACTTCCCAGCTCCTTGAGTACTTCCAGTA] [-] EMBL CD138145 [GAATATGATGTATTACGAGGAATTAAGTTCATAAATCAATTTTAGCGATAACCGGTGTAATATTGACTCATTGCTGGCGGAGCGGCAGCAGTTGGGACCCCACCTGGAGGAGCACCGCCAACTGGGATAGTACCATACCCAGATGGATAAGTAGAATACCCAGGGTAATAGCTTGCATAAGGATTTGCGGCTGGTGTCTGTGGTGTTACTGTTGCGGTTGGAGCACTTGGGACGCTGCTGGATACACTACCAGACACAGCCGAAGGTTGCTGCTGTTGTTGCCACGCGTTAAACTGTTGTGCAGCAGCCATCGCTGCATC GTACTTCCCAGCTCCTTGAGTACTTCCAGTA] [-] EMBL CD069076 [ CAGTTGGGACCCCACCTGGAGGAGCACCGCCAACTGGGATAGTACCATACCCAGATGGATAAGTAGAATACCCAGGGTAATAGCTTGCATAAGGATTTGCGGCTGGTGTCTGTGGTGTTACTGTTGCGGTTGGAGCACTTGGGACGCTGCTGGATACACTACCAGACACAGCCGAAGGTTGCTGCTGTTGTTGCCACGCGTTAAACTGTTGTGCAGCAGCCATCGCTGCATCTGTACTTCCCAGCTCCTTGAGTACTTCCAGTA] consensusID : consensus_10813#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 308 fasta sequence [TGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGTGGCGGTGGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGTGAGTTGACGGGTGTTTGTGTGATGTGTGTCGATAGGCGTTGCGATGTGATTTGATTTGAGTTGTGTAGTTGTATCGAGAGATGTGAGCGAGCGAGTGTATTTTTGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGTGGCGGTGGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGTGAGTTGACGGGTGTTTGTGTGATGT] [+] EMBL CD198136 [TGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGTGGCGGTGGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGTGAGTTGACGGGTGTTTGTGTGATGTGTGTCGATAGGCGTTGCGATGTGATTTGATTTGAGTTGTGTAGTTGTATCGAGAGATGTGAGCGAGCGAGTGTATTTTTGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGTGGCGGTGGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGTGAGTTGACGGGTGTTTGTGTGATGT] consensusID : consensus_10813#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 147 fasta sequence [TCACACCCAATCTTGCCAAAGATGCTGGTACAATTGCTGGTTTGAATATACTCCGGATTATTAATGAACCAACTGCTGCTGCAATTGCTTACGGTCTAGATAAGAAAGATGGTGAGAAAAATATTCTGATATTTGATCTTGGTGGAG] [+] EMBL CD168739 [TCACACCCAATCTTGCCAAAGATGCTGGTACAATTGCTGGTTTGAATATACTCCGGATTATTAATGAACCAACTGCTGCTGCAATTGCTTACGGTCTAGATAAGAAAGATGGTGAGAAAAATATTCTGATATTTGATCTTGGTGGAG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10813#0 TGTCGTGTTACGCTTAATCAAAGCCGTCATCACCACCTCCAGCCGTTTCAAGACCCAATG 60 consensus_10813#4 --------------------------------------------------------GAAT 4 consensus_10813#1 ---ACAGGAGGAGGTGTAGTTGTATCGAGAGATGTGAGCGAGCGAGTGTATTTTTGAATT 57 consensus_10813#5 ------------------------------------------------------TGAATT 6 consensus_10813#2 -------------------------------ATGTGAGCGAGCGAGTGTATTTTTGAATT 29 consensus_10813#3 ------------------------------------------------------------ consensus_10813#6 ------------------------------------------------------------ consensus_10813#0 ATAGTGGAGCTACGAG----GAATTAAGTTCATAAATCAATTT---TAGCGATAACCGGT 113 consensus_10813#4 ATGATGTA-TTACGAG----GAATTAAGTTCATAAATCAATTT---TAGCGATAACCGGT 56 consensus_10813#1 GGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGCGGCGGTGGCGGCGACAAGA 117 consensus_10813#5 GGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGTGGCGGTGGCGGCGACAAGA 66 consensus_10813#2 GGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGG------------CGACAAGA 77 consensus_10813#3 -----------------------------------------------GGCGGCGACAAGA 13 consensus_10813#6 ------------------------------------------------------------ consensus_10813#0 GTAAT--ATTGACTCATTGCTGGCGGAGCGGCAGCAGTTGGGACCCCACCTG--GAGGAG 169 consensus_10813#4 GTAAT--ATTGACTCATTGCTGGCGGAGCGGCAGCAGTTGGGACCCCACCTG--GAGGAG 112 consensus_10813#1 GTGGTTGGTTGATGAGTTTCAGGTGAGTTGACGGGTGTTTGTGTGATGTGTGTCGATAGG 177 consensus_10813#5 GTGGTTGGTTGATGAGTTTCAGGTGAGTTGACGGGTGTTTGTGTGATGTGTGTCGATAGG 126 consensus_10813#2 GTGGTTGGTTGATGAGTTTCAGGAGCGAAGACGG----TGGTGTTG-GTTTGGCGATGGA 132 consensus_10813#3 GTGGTTGGTTGATGAGTTTCAGGAGCGAAGACGG----TGGTGTTG-GTTTGGCGATGGA 68 consensus_10813#6 ------------------------------------------------------------ consensus_10813#0 CACCGCCAACTGGGAT------AGTACCATACCCAGATGGATAAGTA----GAATACCC- 218 consensus_10813#4 CACCGCCAACTGGGAT------AGTACCATACCCAGATGGATAAGTA----GAATACCC- 161 consensus_10813#1 CGTTGCGATGTAATTTGATTTGAGTTGTGTAGATGTGTTTGCAGATGGTTTGATTGTTTG 237 consensus_10813#5 CGTTGCGATGTGATTTGATTTGAGTTGTGTAGTTGTATCGAGAGATG---TGAGCGAGCG 183 consensus_10813#2 ----GAGA-GTGGACTG--TGAAGAGGTGTAGTTGTATCGAGAGATG---TGAGCGAGCG 182 consensus_10813#3 ----GAGA-GTGGACTG--TGAAGAGGTGTAGTTGTATCGAGAAACA---TGAGT--CTA 116 consensus_10813#6 --------------------------------TCACACCCAATCTTG--CCAAAGATGCT 26 * consensus_10813#0 AGGGTAATAGCTTGCATAAGGATTTGCGG--CTGGTGTCTGTGGTGTTACTGTTGCGGTT 276 consensus_10813#4 AGGGTAATAGCTTGCATAAGGATTTGCGG--CTGGTGTCTGTGGTGTTACTGTTGCGGTT 219 consensus_10813#1 ATTGTTGATTTTCGCAGTGTATTTTGGTG--TTGGTGTTGTTGTTGTTGTTGTTGTTATG 295 consensus_10813#5 AGTGT--ATTTTTGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGTG 241 consensus_10813#2 AGTGT--ATTTTTGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGCG 240 consensus_10813#3 GCTATTGGTATTGACTTGGGAACTACATATTCCTGCGTCGGCATTTTCATGAACGAGAAC 176 consensus_10813#6 GGTACAATTGCTGGTTTGAATATACTCCGGATTATTAATGAACCAACTGCTGCTGCAATT 86 * * consensus_10813#0 GGAGCACTTGGGA--CGCTGCTGGATACACTAC-CAG--ACACAGCCGAAGGTTGCTGCT 331 consensus_10813#4 GGAGCACTTGGGA--CGCTGCTGGATACACTAC-CAG--ACACAGCCGAAGGTTGCTGCT 274 consensus_10813#1 TGAATGTTGAATAGTTGATATTAGTTTCATGAT-GAATTGTCCATACATTCGCGGTTTCC 354 consensus_10813#5 GCGGTGGCGGCGA--CAAGAGTGGTTGGTTGAT-GAGTTTCAGGTGAGTTGACGGGTGTT 298 consensus_10813#2 GCGGTGGCGGCGA--CAAGAGTGGTTGGTTGAT-GAGTTTCAGGAGCGAAGACGG-TGGT 296 consensus_10813#3 GTCGAGATCATCA---GCAACGAGCAGGGTAACAGAACTACCCCCTCCTATGTTGCTTTT 233 consensus_10813#6 GC--TTACGGTCT----AGATAAGAAAGATGGTGAGAAAAATATTCTGATATTTGATCTT 140 * * * consensus_10813#0 GTTGTTGCCACGCGTTAAACTGTTGTGCAGCAGCCATCGCTGCA----TCGTACTTCCCA 387 consensus_10813#4 GTTGTTGCCACGCGTTAAACTGTTGTGCAGCAGCCATCGCTGCA----TCGTACTTCCCA 330 consensus_10813#1 ACTGACTCGAGAATTGATGTTGTTCTCCGTCACTTGGATGTCTGACTTTTGTGTTTGTGT 414 consensus_10813#5 TGTGTGATGT-------------------------------------------------- 308 consensus_10813#2 GTTGGTTTGGCGATGGAGAGAGTGGACTGTGA---AGAGGTGTAG---TTGTATCGAGAG 350 consensus_10813#3 ACCGACACTGAAAGACTGATCGGTGAA-GCCGCCAAGAACCAGGTTGAACGCAACCCTGA 292 consensus_10813#6 GGTGGAG----------------------------------------------------- 147 * consensus_10813#0 GC-TCCTTGAGTACTTCCAGTAGCACTTTGGGGAGCACCATAGTAATAGGAGGCATAAGC 446 consensus_10813#4 GC-TCCTTGAGTACTTCCAGTA-------------------------------------- 351 consensus_10813#1 TTGTGCGTGTGTGTTTATTGTGACGAGTTAGTGATATGTTGTTTTTGTGTTTAATTTGTT 474 consensus_10813#5 ------------------------------------------------------------ consensus_10813#2 ATGTGAGCGAGCGAGTGTATTTTTGAATTGG-AGTGTACTGACTAGACGGGAGTATAGTT 409 consensus_10813#3 AA--ACACTGTTTTCGATGCCAAACGTCTGATCGGTCGCAAGTTCAACGATAAGGAGGTT 350 consensus_10813#6 ------------------------------------------------------------ consensus_10813#0 TGCTGCAGCCGGCGTCGAATGGTCAGATGTGGCAGTAGTGGTGGTGGCGACAAGAGTGGT 506 consensus_10813#4 ------------------------------------------------------------ consensus_10813#1 TATTTTGTAGGAGCGAAGACGGTGGTGTTGGTTTGGCGATGGAGAGAGTGGACTGTGAAG 534 consensus_10813#5 ------------------------------------------------------------ consensus_10813#2 T---TTGTGGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGAGCGAAGACGGTGGTG 466 consensus_10813#3 CAGAGCG-ATATGAAGCACTGGCCCTTCAAGGTCGTCGACGGATCTGATGGAAAGCCAAT 409 consensus_10813#6 ------------------------------------------------------------ consensus_10813#0 TGGTTGATGAGTTTCAGGAGCGAAGACGGTGGTGTTGGTTTGGCGATTGAGAGAGTGGAC 566 consensus_10813#4 ------------------------------------------------------------ consensus_10813#1 AGGTGTAGTTGTACCGAGAGATGTGAGCGAGCGAGTGTATTTTTGAATTGGAGTGTACTG 594 consensus_10813#5 ------------------------------------------------------------ consensus_10813#2 ------------------------------------------------------------ consensus_10813#3 GATCGTCGTCAAGTTCAAAGGTCAGGAAGAGA---------------------------- 441 consensus_10813#6 ------------------------------------------------------------ consensus_10813#0 TGTGAAGAGGTGTAGTTGTATCGAGAGATGTGAGCGAGCGAGTGTATTTTTGAATTGGAG 626 consensus_10813#4 ------------------------------------------------------------ consensus_10813#1 ACTAGACGGGAGTATAGTTTTTGTGGCGGCGGCGGTGGC--------------------- 633 consensus_10813#5 ------------------------------------------------------------ consensus_10813#2 ------------------------------------------------------------ consensus_10813#3 ------------------------------------------------------------ consensus_10813#6 ------------------------------------------------------------ consensus_10813#0 TGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGCGGCGGTGGCGGCGACAAGAGTGG 686 consensus_10813#4 ------------------------------------------------------------ consensus_10813#1 ------------------------------------------------------------ consensus_10813#5 ------------------------------------------------------------ consensus_10813#2 ------------------------------------------------------------ consensus_10813#3 ------------------------------------------------------------ consensus_10813#6 ------------------------------------------------------------ consensus_10813#0 TTGGTTGATGAGTTTCAAGAGCGAAGACGGTGGTGTTGATTTGGCGATTGATAGAGTGGA 746 consensus_10813#4 ------------------------------------------------------------ consensus_10813#1 ------------------------------------------------------------ consensus_10813#5 ------------------------------------------------------------ consensus_10813#2 ------------------------------------------------------------ consensus_10813#3 ------------------------------------------------------------ consensus_10813#6 ------------------------------------------------------------ consensus_10813#0 CTGTGAAGAGGTGTAGTTGTATCGAGAGATGTGAGCGAGCGAGTGTATTTTTGAATTGCA 806 consensus_10813#4 ------------------------------------------------------------ consensus_10813#1 ------------------------------------------------------------ consensus_10813#5 ------------------------------------------------------------ consensus_10813#2 ------------------------------------------------------------ consensus_10813#3 ------------------------------------------------------------ consensus_10813#6 ------------------------------------------------------------ consensus_10813#0 GTGTACTGACTATACGGGAGTATAGTTNTTGTGGCGGCGGCTGTTGCCGCGACAAAAGTG 866 consensus_10813#4 ------------------------------------------------------------ consensus_10813#1 ------------------------------------------------------------ consensus_10813#5 ------------------------------------------------------------ consensus_10813#2 ------------------------------------------------------------ consensus_10813#3 ------------------------------------------------------------ consensus_10813#6 ------------------------------------------------------------ consensus_10813#0 GTTGGTT 873 consensus_10813#4 ------- consensus_10813#1 ------- consensus_10813#5 ------- consensus_10813#2 ------- consensus_10813#3 ------- consensus_10813#6 ------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||