|
These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10817#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 22 consensus length = 1058 fasta sequence
[CTCCGAGCCAAGATTCGGCACGAGGGTTCTCTTGTTGTTGATAGGAGGTCTGGTGGTTTCTCGTTCGAAAATTGT-TACAGGAATAAACTCATCGAACAAAAAGGCTTCGAATTGCCCAAAGCCGTAAAGACTGGAACAACAATATGTGGTGTCGTTTTCAAGAATGGAGTAGTTCTAGGTGCAGATACACGGGCAACAGAAGGTACTGTAGTTGCTGAGAAGAACTGCTCAAAAATTCATCGCATTTCCGAAAATATATATTGCTGTGGTGCTGGGACTGCAGCCGACACCCAAATGGTTACACTGATGATTTCTTCACAAGTCGAACTCCAC-AGTTTGAATACGGGCAGGACTCCTCGTGTTATCGCTCCACTTCGTCTCCTTAAACGCTATCTCTATCAGTACCAGGGTTATGTTGGTGCTGCACTCGTATTAGGTGGTGTGGACTCAACAGGCCCTCATTTGTATAGTATTGCGCCTCATGGGTCAACGGATAAATTACCGTATATCACTATGGGTAGCGGGAGTCTTGCGTGTATGTCTGTACTTGAATCAAGATTTAAATTTGATATGGAACAAGATGAAGCCGTAAAATTAGTACGTGATGGAATAGCAGCTGGAATATTCAATGATATGGNGTCTGGCAGTAATGTCGATATATGTATTATTACTAAAGATGGAACC-ACTTATATACGATCATATGATGAAGCTAATGTCAAAGGCAAGAGAGCAGAAAA-GTATAATCCTCCAGAAGGTACTACTTCTGTTCTCCACAAAAGTGTTCATCATGTTGAGTTCGATGTGGTCACAACACGTGTTGTTCGAGATATACCTGCTCATAGTGTTGAGACAATGGATCTTTCTTAAGTGTAATTTAAATTTTCTCAAATGAATTGTGATTCCTATGTTGTTTGCTTTATCGGTTTTTCAAATAAATTCACCGTAAAGACTTTCCTTTTTGTTATCGAAATGTTTTAACACAGTACAATATCCCTATTCTGTTTATTTTGAATTACTAATATATAATCAACACCATTCAAATTCATTCTATAGTAAAG]
[+] EMBL CD083204 [CTCCGAGCCAAGATTCGGCACGAGGGTTCTCTTGTTGTTGATAGGAGGTCTGGTGGTTTCTCGTTCGAAAATTGT TACAGGAATAAACTCATCGAACAAAAAGGCTTCGAATTGCCCAAAGCCGTAAAGACTGGAACAACAATATGTGGTGTCGTTTTCAAGAATGGAGTAGTTCTAGGTGCAGATACACGGGCAACAGAAGGTACTGTAGTTGCTGAGAAGAACTGCTCAAAAATTCATCGCATTTCCGAAAATATATATTGCTGTGGTGCTGGGACTGCAGCCGACACCCAAATGGTTACACTGATGATTTCTTCACAAGTCGAACTCCAC AGTTTGAATACGGGCAGGACTCCTCGTGTTATCGCTCCACTTCGTCTCCTTAAACGCTATCTCTATCAGTACCAGGGTTATGTTGGTGCTGCACTCGTATTAGGTGGTGTGGACTCAACAGGCCCTCATTTGTATAGTATTGCGCCTCATGGGTCAACGGATAAATTACCGTATATCACTATGGGTAGCGGGAGTCTTGCGTGTATGTCTGTACTTGAATCAAGATTTAAATTTGATATGGAACAAGATGAAGCCGTAAAATTAGTACGTGATGGAATAGCAGCTGGAATATTCAATGATATGGNGTCTGGCAGTAATGTCGATATATGTATTATTACTAAAGATGGAAAC ACTTA ]
[-] EMBL CD126205 [ GTTGATAGGAGGTCTGGTGGTTTCTCGTTCGAAAATTGT TACAGGAATAAACTCATCGAACAAAAAGGCTTCGAATTGCCCAAAGCCGTAAAGACTGGAACAACAATATGTGGTGTCGTTTTCAAGAATGGAGTAGTTCTAGGTGCAGATACACGGGCAACAGAAGGTACTGTAGTTGCTGAGAAGAACTGCTCAAAAATTCATCGCATTTCCGAAAATATATATTGCTGTGGTGCTGGGACTGCAGCCGACACCCAAATGGTTACACTGATGATTTCTTCACAAGTCGAACTCCAC AGTTTGAATACGGGCAGGACTCCTCGTGTTATCGCT ]
[+] EMBL CD202313 [ GGTCTGCTGGTTTCTCGTTCGAAAATTGT TACAGGAATAAACTCATCGAACAAAAAGGCTTCGAATTGCCCAAAGCCATAAAGACTGGAACAACAATATGTGGTGTCGTTTTCAAGAATGGAGTAGTTCTAGGTGCAGATACACGGGCAACAGAAGGTACTGTAGTTGCTGAGAAGAACTGCTCAAAAATTCATCGCATTTCCGAAAATATGTATTGCTGTGGTGCTGGGACTGCAGCCGACACCCAAATGGTTACACTGATGATTTCTTCACAAGTCGAACTCCAC AGTTTGAATACGGGCAGGACTCCTCGTGTTATCGCTCCACTTCGTCTCCTTAAACGCTATCTCTATCAGTACCAGGGTTATGTTGGTGCTGCACTCGTATTAGGTGGTGTGGACTCAACAGGCCCTCATTTGTATAGTATTGCG ]
[+] EMBL CD155822 [ TTTCTCGTTCGAAAATTGT TACAGGAATAAACTCATCGAACAAAAAGGCTTCGAATTGCCCAAAGCCGTAAAGACTGGAACAACAATATGTGGTGTCGTTTTCAAGAATGGAGTAGTTCTAGGTGCAGATACACGGGCAACAGAAGGTACTGTAGTTGCTGAGAAGAACTGCTCAAAAATTCATCGCATTTCCGAAAATATATATTGCTGTGGTGCTGGGACTGCAGCCGACACCCAAATGGTTACACTGATGATTTCTTCACAAGTCGAACTCCAC AGTTTGAATACGGGCAGGACTCCT ]
[+] EMBL CD118367 [ TTTCTCGTTCGAAAATTGT TACAGGAATAAACTCATCGAACAAAAAGGCTTCGAATTGCCCAAAGCCGTAAAGACTGGAACAACAATATGTGGTGTCGTTTTCAAGAATGGAGTAGTTCTAGGTGCAGATACACGGGCAACAGAAGGTACTGTAGTTGCTGAGAAGAACTGCTCAAAAATTCATCGCATTTCCGAAAATATATATTGCTGTGGTGCTGGGACTGCAGCCGACACCCAAATGGTTACACTGATGATTTCTTCACAAGTCGAACTCCAC AGTTTGAATACGGGCAGGACTCCTCGTGTTATCGC ]
[+] EMBL CD155859 [ TTTCTCGTTCGAAAATTGT TACAGGAATAAACTCATCGAACAAAAAGGCTTCGAATTGCCCAAAGCCGTAAAGACTGGAACAACAATATGTGGTGTCGTTTTCAAGAATGGAGTAGTTCTAGGTGCAGATACACGGGCAACAGAAGGTACTGTAGTTGCTGAGAAGAACTGCTCAAAAATTCATCGCATTTCCGAAAATATATATTGCTGTGGTGCTGGGACTGCAGCCGACACCCAAATGGTTACACTGATGATTTCTTCACAAGTCGAACTCCAC AGTTTGAATACGGGCAGGACTCCTCGTGTTATCGC ]
[+] EMBL CD155595 [ TTTCTCGTTCGAAAATTGT TACAGGAATAAACTCATCGAACAAAAAGGCTTCGAATTGCCCAAAGCCGTAAAGACTGGAACAACAATGTGTGGTGTCGTTTTCAAGAATGGAGTAGTTCTAGGTGCAGATACACGGGCAACAGAAGGTACTGTAGTTGCTGAGAAGAACTGCTCAAAAATTCATCGCATTTCCGAAAATATATATTGCTGTGGTGCTGGGACTGCAGCCGACACCCAAATGGTTACACTGATGATTTCTTCACAAGTCGAACTCCAC AGTTTGAATACGGGCAGGACTCCTCGTGTTATCGC ]
[-] EMBL CD155751 [ TTCTCGTTCGAAAA TGTANCCAGGAATAAACTCATCGAACAAAAAGGCTTCGAATTGCCCAAAGCCGTAAAGACTGGAACAACAATATGTGGTGTCGTTTTCAAGAATGGAGTAGTTCTAGGTGCAGATACACGGGCAACAGAAGGTACTGTAGTTGCTGAGAAGAACTGCTCAAAAATTCATCGCATTTCCGAAAATATATATTGCTGTGGTGCTGGGACTGCAGCCGACACCCAAATGGTTACACTGATGATTTCTTCACAAGTCGAACTCCACAAGTTTGAATACGGGCAGGACTCCTCGTGTTATCGCT ]
[-] EMBL CD155829 [ TTCTCGTTCGAAAATTGT TACAGGAATAAACTCATCGAACAAAAAGGCTTCGAATTGCCCAAAGCCGTAAAGACTGGAACAACAATATGTGGTGTCGTTTTCAAGAATGGAGTAGTTCTAGGTGCAGATACACGGGCAACAGAAGGTACTGTAGTTGCTGAGAAGAACTGCTCAAAAATTCATCGCATTTCCGAAAATATATATTGCTGTGGTGCAGGGACTGCAGCCGACACCCAAATGGTTACACTGATGATTTCTTCACAAGTCGAACTCCAC AGTTTGAATACGGGCAGGACTCCTCGTGTTATCGCT ]
[-] EMBL CD118371 [ TTCTCGTTCGAAAATTGT TACAGGAATAAACTCATCGAACAAAAAGGCTTCGAATTGCCCAAAGCCGTAAAGACTGGAACAACAATATGTGGTGTCGTTTTCAAGAATGGAGTAGTTCTAGGTGCAGATACACGGGCAACAGAAGGTACTGTAGTTGCTGAGAAGAACTGCTCAAAAATTCATCGCATTTCCGAAAATATATATTGCTGTGGTGCTGGGACTGCAGCCGACACCCAAATGGTTACACTGATGATTTCTTCACAAGTCGAACTCCAC AGTTTGAATACGGGCAGGACTCCTCGTGTTATCGCT ]
[-] EMBL CD118335 [ TTCTCGTTCGAAAATTGT TACAGGAATAAACTCATCGAACAAAAAGGCTTCGAATTGCCCAAAGCCGTAAAGACTGGAACAACAATATGTGGTGTCGTTTTCAAGAATGGAGTAGTTCTAGGTGCAGATACACGGGCAACAGAAGGTACTGTAGTTGCTGAGAAGAACTGCTCAAAAATTCATCGCATTTCCGAAAATATATATTGCTGTGGTGCTGGGACTGCAGCCGACACCCAAATGGTTACACTGATGATTTCTTCACAAGTCGAACTCCAC AGTTTGAATACGGGCAGGACTCCTCGTGCTATCGCT ]
[-] EMBL CD155655 [ TTCTCGTTCGAAAATTGT TACAGGAATAAACTCATCGAACAAAAAGGCTTCGAATTGCCCAAAGCCGTAAAGACTGGAACAACAATATGTGGTGTCGTTTTCAAGAATGGAGTAGTTCTAGCTGCAGATACACGGGCAACAGAAGGTACTGTAGTTGCTGAGAAGAACTGCTCAAAAATTCATCGCATTTCCGAAAATATATATTGCTGTGGTGCTGGGACTGCAGCCGACACCCAAATGGTTACACTGATGATTTCTTCACAAGTCGAACTCCAC AGTTTGAATACGGGCAGGACTCCTCGTGTTATCGCT ]
[-] EMBL CD155678 [ TTCTCGTTCGAAAATTGT TACAGGAATAAACTCATCGAACAAAAAGGCTTCGAATTGCCCAAAGCCGTAAAGACTGGAACAACAATATGTGGTGTCGTTTTCAAGAATGGAGTAGTTCTAGGTGCAGATACACGGGCAACAGAAGGTACTGTAGTTGCTGAGAAGAACTGCTCAAAAATTCATCGCATTTCCGAAAATATATATTGCTGTGGTGCTGGGACTGCAGCCGACACCCAAATGGTTACACTGATGATTTCTTCACAAGTCGGACTCCAC AGTTTGAATACGGGCAGGACTCCTCGTGTgccgc ]
[-] EMBL CD155708 [ TTCTCGTTCGAAAATTGT TACAGGAATAAACTCATCGAACAAAAAGGCTTCGAATTGCCCAAAGCCGTAAAGACTGGAACAACAATATGTGGTGTCGTTTTCAAGAATGGAGTAGTTCTAGGTGCAGATACACGGGCAACAGAAGGTACTGTAGTTGCTGAGAAGAACTGCTCAAAAATTCATCGCATTTCCGAAAATATATATTGCTGTGGTGCTGGGACTGCAGCCGACACCCAAATGGTTACACTGATGATTTCTTCACAAGTCGAACTCCAC AGTTTGAATACGGGCAGGACTCCTC ]
[+] EMBL CD114466 [ TGCTGAGAAGAACTGCTCAAAAATTCATCGCATTTCCGAAAATATATATTGCTGTGGTGCTGGGACTGCAGCCGACACCCAAATGGTTACACTGATGATTTCTTCACAAGTCGAACTCCAC AGTTTGAATACGGGCAGGACTCCTCGTGTTATCGCTCCACTTCGTCTCCTTAAACGCTATCTCTATCAGTACCAGGGTTATGTTGGTGCTGCACTCGTATTAGGTGGTGTGGACTCAACAGGCCCTCATTTGTATAGTATTGCGCCTCATGGGTCAACGGATA ]
[-] EMBL CD114602 [ TGAGAAGAACTGCTCAAAAATTCATCGCATTTCCGAAAATATATATTGCTGTGGTGCTGGGACTGCAGCCGACACCCAAATGGTTACACTGATGATTTCTTCACAAGTCGAACTCCAC AGTTTGAATACGGGCAGGACTCCTCGTGTTATCGCTCCACTTCGTCTCCTTAAACGCTATCTCTATCAGTACCAGGGTTATGTTGGTGCTGCACTCGTGTTAGGTGGTGTGGACTCAACAGGCCCTCATTTGTATAGTATTGCGCCTCGTGGGTCAACGGATAA ]
[-] EMBL CD114422 [ taAGAAGAAATGCTCAAAAATTCATCGCATTTCCGAAAATATATATTGCTGTGGAGCTGGGACTGCAGCCGACACCCAAATGGTTACGCTGATGATTTCTTCACGAGTCGAACTCCAC AGTTTGAATACGGGCAGGACTCCTCGTGTTATCGCTCCACTTCGTCTCCTTAAACAAAATATATATCAGTACCAGGGTTATGTTGGTGCTGCACTCGTATTAGGTGGTGTGGACTCAACAGGCCCTCATTTGTATAGTATTGCGCCTCATGGGTCAACGGATAA ]
[+] EMBL CD155594 [ GAAGAACTGCTCAAAAATTCATCGCATTTCCGAAAATATATATTGCTGTGGTGCTGGGACTGCAGCCGACACCCAAATGGTTACACTGATGATTTCTTTACAAGGCGAACTCCAC AGTTTGAATACGGGCAGGACTCCTCGTGTTATCGC ]
[+] EMBL CD141881 [ CGCTCCACTTCGTCTCCTTAAACGCTATCTCTATCAGTACCAGGGTTATGTTGGTGCTGCACTCGTATTAGGTGGTGTGGACTCAACAGGCCCTCATTTGTATAGTATTGCGCCTCATGGGTCAACGGATAAATTACCGTATATCACT ]
[+] EMBL CD141014 [ CCAGGGTTATGTTGGTGCTGCACTCGTATCAGGTGGTGTGGACTCAACAGGCCCTCATTTGTATAGTACTGCGCCTCATGGGTCAACGGATAAATTACCGTATATCACTATGGATAGCGGGAGTCTTGCGTGTATGTCTGTACTTGAATCAAGATTTAAATTTGATATGGAACAAGATGAAGCCGTANAATT ]
[-] EMBL CD076779 [ CATGGGTCAACGGATAAATTACCGTATATCACTATGGGTAGCGGGAGTCTTGCGTGTATGTCTGTACTTGAATCAAGATTTAAATTTGATATGGAACAAGATGAAGCCGTAAAATTAGTACGTGATGGAATAGCAGCTGGAATATTCAATGATATGGGGTCTGGCAGTAATGTCGATATATGTATTATTACTAAAGATGGAACA ACTTATATACGATCATATGATGAAGCTAATGTCAAAGGCAAGAGAGCAGAAAA GTATAATCCTCCAGAAGGTACTACTTCTGTTCTCCACAAAAGTGTTCATCATGTTGAGTTCGATGTGGTCACAACACGTGTTGTTCGAGATATACCTGCTCATAGTGTTGAGACAATGGATCTTTCTTAAGTGTAATTTAAATTTTCTCAAATGAATTGTGATTCCTATGTTGTTTGCTTTATCGGTTTTTCAAATAAATTCACCGTAAAGACTTTCCTTTTTGTTATCGAAATGTTTTAACACAGTACAATATCCCTATTCTGTTTATTTTGAATTACTAATATATAATCAACACCATTCAAATTCATTCTATAGTAAAG]
[-] EMBL SMAA25682 [ ATGTATTATTACTAAAGATGGAACCAACTTATATNCGATCATATGATGAAGCTAATGTCAAAGGCAAGAGAGCAGAAAAGGTATAATCCTCCAGAAGGTACTACTTCTGTTCTCCACAAAAGTGTTCATCATGTTGAGTTCGATGTGGTCACAACACGTGTTGTTCGAGATATACCTGCTCATAGTGTTGAGACAATGGATCTNTCTTAAGTGTATTTTAAATTTTCTCAAATGAATTGTGATTCCTATGTTGTTTGCTTTATCGGTTTTTCAAATAAATTC ]
clustalw multiple alignements is not computed in this case |
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||