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Schistosoma mansoni
cluster # 10818 cluster # 10818       Sequences # 22       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10818#0 length = 1078 sequences # 21  
consensus_10818#1 length = 141 sequences # 1  

consensusID : consensus_10818#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 21
consensus length = 1078
fasta sequence
                              [CCGCCCCAAAAGAAATTGTGAGGAGTAGCGTAACGTTAATTTCGATAATGAGTTTTTCACCTAGGTTGTGTTGCTTGCGAAACCTTACCGGTTTTAGCGAA-TTTTTTGGGCCAGTGTCCAAAGTTTCAGTAGGACTTTTACGACCATCGTCAATCGTACGTACATCTAAAGCGGCTAAAGGTAGTACGAGCGAGAAAGTCCGTAGGCAAGCTGAAAAGGAAATGCAGTCATTTTGGGACAGAAATGCTACGGAAAAGCGGCCGTGGTCTCCCCATCTTCAGGTTTACTCGTCACCTTTAGTAATGAGATTCTCTTTTCTCCACCGAGCCACTGGTATTGCTATGGCTATCGTGTGGTCATCTGTAGGGATCGGTGCTTTCTTTTTCACTGGGCATTATGACTCTATACTTGACTATGTGAGGAACATGCATTTGGG-TACTTCTGTTATAGCTGCATGCAAGTTTATTCTATGTTACCCATTGGTTTACCACTATTTGAACGGGATGAGACATCTGGCTTGGG-ACTACGCTATTGGCTTTCCTATCAAAACATGTAATACAACTGGATTTATTGCTTTAGGATCATCTTTAGTTATTTCTGCTATCTTAGCTTGCATCCGATTATAACATTGTCCTATCGGATATTCTCTGGGTTCATCTTGTTATTTTCTCCGTTTCCTATTGATTATATGTTGTCAAAACATAATTTTTCGTTCGTAAATATGACTTTTAGTACTTATATTTGTATTTTTTCTACAAATACATTAACGATTGCGTTGTCTCATGACGAAAGATATCTTCATTCACTATAACACTTACACTACTTGGTTTATGTGTGTGTGATCAGTGTAATGAATAGTTGATGACGTTGTGTGACATTGTTCAGAATTGGTCGCAATGGCGCAAATACATTTACATTATCTTATCCTTTTTATCCATCGGATTCTTTCCTTTTCAAATGATGTTCTCTATCTTTTCAAATAAACTGAGTATCATGTGAAATGTTAATCGTAAAATAATCATGTATTTGTGACATCCCAATCAATAGAAGTTAGAATTTCTGCAAAAAAAAAAAAAAA]

[+] EMBL CD135411             [CCGCCCCAAAAGAAATTGTGAGGAGTAGCGTAACGTTAATTTCGATAATGAGTTTTTCACCTAGGTTGTGTTGCTTGCGAAACCTTACCGGTTTTAGCGAATTTTTTTGGGCCAGTGTCCAAAGTTTCAGTAGGACTTTTACGACCATCGTCAATCGTACGTACATCTAAAGCGGCTAAAGGTAGTACGAGCGAGAAAGTCCGTAGGCAAGCTGAAAAGGAAATGCAGTCATTTTGGGACAGAAATGCTACGGAAAAGCGGCCGTGGTCTCCCCATCTTCAGGTTTACTCGTCACCTTTAGTAATGAGATTCTCTTTTCTCCACCGAGCCACTGGTATTGCTATGGCTATCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD132018             [            AAATTGTGAGGAGTAGCGTAACGTTAATTTCGATAATGAGTTTTTCACCTAGGTTGTGTTGCTTGCGAAACCTTACCGGTTTTAGCGAA TTTTTTGGGCCAGTGTCCAAAGTTTCAGTAGGACTTTTACGACCATCGTCAATCGTACGTACATCTAAAGCGGCTAAAGGTAGTACGAGCGAGAAAGTCCGTAGGCAAGCTGAAAAGGAAATGCAGTCATTTTGGGACAGAAATGCTACGGAAAAGCGGCCGTGGTCTCCCCATCTTCAGGTTTACTCGTCACCTTTAGTAATGAGATTCTCTTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD135223             [            AAATTGTGAGGAGTAGCGTAACGTTAATTTCGATAATGAGTTTTTCACCTAGGTTGTGTTGCTTGCGAAACCTTACCGGTTTTAGCGAA TTTTTTGGGCCAGTGTCCAAAGTTTCAGTAGGACTTTTACGACCATCGTCAATCGTACGTACATCTAAAGCGGCTAAAGGTAGTACGAGCGAGAAAGTCCGTAGGCAAGCTGAAAAGGAAATGCAGTCATTTTGGGACAGAAATGCTACGGAAAAGCGGCCGTGGTCTCCCCATCTTCAGGTTTACTCGTCACCTTTAGTAATGAGATTCTCTTTTCTCCACCGAGCCACTGGTATTGGTATGGCTATCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD201929             [             AATTGTGAGGAGTAGCGTAACGTTAATTTCGATAATGAGTTTTTCACCTAGGTTGTGTTGCTTGCGAAACCTTACCGGTTTTAGCGAA TTTTTTGGGCCAGTGTCCAAAGTTTCAGTAGGACTTTTACGACCATCGTCAATCGTACGTACATCTAAAGCGGCTAAAGGTAGTACGAGCGAGAAAGTCCGTAGGCAAGCTGAAAAGGAAATGCAGTCATTTTGGGACAGAAATGCTACGGAAAAGCGGCCGTGGTCTCCCCATCTTCAGGTTTACTCGTCACCTTTAGTAATGAGATTCTCTTTTCTCCACCGAGCCACTGGTATTGCTATGGCTATCGTGTGGTCATCTGTAGGGATCGGTGCTTTCTTTTTCACTGGGCATTATGACTCTATACTTGACTATGTGAGGAACATGCATTTGGG TACTTCTGTTATAGCTGCATGCAAGTTTATTCTATGTTACCCATTGGTTTACCACTATTTGAACGGGATGAGACATCTGGCTTGGG A                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD145346             [              ATTGTGAGGAGTAGCGTAACGTTAATTTCGATAATGAGTTTTTCACCTAGGTTGTGTTGCTTGCGAAACCTTACCGGTTTTAGCGAA TTTTTTGGGCCAGTGTCCAAAGTTTCAGTAGGACTTTTACGACCATCGTCAATCGTACGTACATCTAAAGCGGCTAAAGGTAGTACGAGCGAGAAAGTCCGTAGGCAAGCTGAAAAGGAAATGCAGTCATTTTGGGACAGAAATGCTACGGAAAAGCGGCCGTGGTCTTCCCATCTTCAGGTTTACTCGTCACCTTTAGTAATGAGATTCTCTTTTCTCCACCGAGCCACTGGTATTGCTATGGCTATCGTGTGGTCATCTGTAGGGATCGGTGCTTTCTTTTTCACTGGGCATTATGACTCTATACTTGACTATGTGAGGAACATGCATTTGGG TACTTCTGTTAGAGCTGCATGCAAGTTTATTCTATGTTACCCATTGGTTTACCACTATTTGAACGGGATGAGACATCTGGCTTGGG AC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD145197             [              ATTGTGAGGAGTAGCGTAACGTTAATTTCGATAATGAGTTTTTCACNTAGGTTGTGTTGCTTGCGAAACCTTACCGGTTTTAGCGAA TTTTTTGGGCCAGTGTCCAAAGTTTCAGTAGGACTTTTACGACCATCGTCAATCGTACGTACATCTAAAGCGGCTAAAGGTAGTACGAGCGAGAAAGTCCGTAGGCAAGCTGAAAAGGAAATGCAGTCATTTTGGGACAGAAATGCTACGGAAAAGCGGCCGTGGTCTCCCCATCTTCAGGTTTACTCGTCACCTTTAGTAATGAGATTCTCTTTTCTCCACCGAGCCACTGGTATTGCTATGGCTATCGTGTGGTCATCTGTAGGGATCGGTGCTTTCTTTTTCACTGGGCATTATGACTCTATACTTGACCATGTGAGGAACATGCATTTGGG TACTTCTGTTATAGCTGCATGCAAGTTTATTCTATGTTACCCATTGGTTTACCACTATTTGAACGGGATGAGACATCTGGCTTGGG AC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD078358             [                  TGAGGAGTAGCGTAACGTTAATTTCGATAATGAGTTTTTCACCTAGGTTGTGTTGCTTGCGAAACCTTACCGGTTTTAGCGAA TTTTTTGGGCCAGTGTCCAAAGTTTCAGTAGGACTTTTACGACCATCGTCAATCGTACGTACATCTAAAGCGGCTAAAGGTAGTACGAGCGAGAAAGTCCGTAGGCAAGCTGAAAAGGAAATGCAGTCATTTTGGGACAGAAATGCTACGGAAAAGCGGCCGTGGTCTCCCCATCTTCAGGTTTACTCGTCACCTTTAGTAATGAGATTCTCTTTTCTCCACCGAGCCACTGGTATTGCTATGGCTATCGTGTGGTCATCTGTAGGGATCGGTGCTTTCTTTTTCACTGGGCATTATGACTCTATACTTGACTATGTGAGGAACATGCATTTGGG TACTTCTGTTATAGCTGCATGCAAGTTTATTCTATGTTACCCATTGGTTTACCACTATTTGAACGGGATGAGACATCTGGCTTGGG ACTACGCTATTGGCTTTCCTATCANAACATGTAATACAACTGGATTTATTGCTTTAGGATCATCTTTAGTTATTTCTGCTATCTTAGCTTGCATCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD078274             [                  TGAGGAGTAGCGTAACGTTAATTTCGATAATGAGTTTTTCACCTAGGTTGTGTTGCTTGCGAAACCTTACCGGTTTTAGCGAA TTTTTTGGGCCAGTGTCCAAAGTTTCAGTAGGACTTTTACGACCATCGTCAATCGTACGTACATCTAAAGCGGCTAAAGGTAGTACGAGCGAGAAAGTCCGTAGGCAAGCTGAAAAGGAAATGCAGTCATTTTGGGACAGAAATGCTACGGAAAAGCGGCCGTGGTCTCCCCATCTTCAGGTTTACTCGTCACCTTTAGTAATGAGATTCTCTTTTCTCCACCGAGCCACTGGTATTGCTATGGCTATCGTGTGGTCATCTGTAGGGATCGGTGCTTTCTTTTTCACTGGGCATTATGACTCTATACTTGACTATGTGAGGAACATGCATTTGGG TACTTCTGTTATAGCTGCATGCAAGTTTATTCTATGTTACCCATTGGTTTACCACTATTTGAACGGGATGAGACATCTGGCTTGGG ACTACGCTATTGGCTTTCCTATCANAACATGTAATACAACTGGATTTATTGCTTTAGGATCATCTTTAGNTATTTCTGCTATCTTAGCTTGCATCCGATTATAACATTGTCCTATCGGATA                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD082508             [                                  GTTAATTTCGATAATGAGTTTTTCACCTAGGTTGTGTTGCTTGCGAAACCTTACCGGTTTTAGCGAA TTTTTTGGGCCAGTGTCCAAAGTTTCAGTAGGACTTTTACGACCATCGTGAATCGTACGTACATCTAAAGCGGCTGAAGGTAGTACGAGCGAGAAAGTCCGTAGGCAAGCTGAAAAGGAAATGCAGTCATTTTGGGACAGAAATGCTACGGAAAAGCGGCCGTGGTCTCCCCATCTTCAGGTTTACTCGTCACCTTTAGTAATGAGATTCTCTTTTCTCCACCGAGCCACTGGTATTGCTATGGCTATCGTGTGGTCATCTGTAGGGATCGGTGCTTTCTTTTTCACTGGGCATTATGACTCTATACTTGACTATGTGAGGAACATGCATTTGGG TACTTCTGTTATAGCTGCATGCAAGTTTATTCTATGTTACCCATTGGTTTACCACTATTTGAACGGGATGAGACATTTGGCTTGGG ACTACGCTATTGGCTTTCCTATCAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AF030969             [                                     AATTTCGATAATGAGTTTTTCACCTAGGTTGTGTTGCTTGCGAAACCTTACCGGTTTTAGCGAA TTTTTTGGGCCAGTGTCCAAAGTTTCAGTAGGACTTTTACGACCATCGTCAATCGTACGTACATCTAAAGCGGCTAAAGGTAGTACGAGCGANAAAGTCCGTAGGCAAGCTGAAAAGGAAATGCAGTCATTTTGGGACAGAAATGCTACGGAAAAGCGGCCGTGGTCTCCCCATCTTCAGGTTTACTCGTCACCTTTAGTAATGAGATTCTCTTTTCTCCACCGAGCCACTGGTATTGCTATGGCTATCGTGTGGTCATCTGTAGGGATCGGTGCTTTCTTTTTCACTGGGCATTATGACTCTATACTTGACTATGTGAGGAACATGCATTTGGG TACTTCTGTTATAGCTGCATGCAAGTTTATTCTATGTTACCCATTGGTTTACCACTATTTGAACGGGATGAGACATCTGGCTTGGG ACTACGCTATTGGCTTTCCTATCAAAACATGTAATACAACTGGATTTATTGCTTTAGGATCATCTTTAGTTATTTCTGCTATCTTAGCTTGCATCCGATTATAACATTGTCCTATCGGATATTCTCTGGGTTCATCTTGTTATTTTCTCCGTTTCCTATTGATTATATGTTGTCAAAACATAATTTTTCGTTCGTAAATATGACTTTTAGTACTTATATTTGTATTTTTTCTACAAATACATTAACGATTGCGTTGTCTCATGACGAAAGATATCTTCATTCACTATAACACTTACACTACTTGGTTTATGTGTGTGTGATCAGTGTAATGAATAGTTGATGACGTTGTGTGACATTGTTCAGAATTGGTCGCAATGGCGCAAATACATTTACATTATCTTATCCTTTTTATCCATCGGATTCTTTCCTTTTCAAATGATGTTTTCTATCTTTTCNAATAAACTGAGTATCATGTGAAATGTTAATCGTAAAATAATCATGTATTTGTGACATCCCAATCAATAGAAGTTAGAATTTCTGCAAAAAAAAAAAAAA ]
[-] EMBL CD162469             [                                                                                                                                                                                       AGTACGAGCGAGAAAGTCCGTAGGCAAGCTGAAAAGGAAATGCAGTCATTTTGGGACAGAAATGCTACGGGAAAGCGGCCGTGGTCTCCCCATCTTCAGGTTTACTCGTCACCTTTAGTAATGAGATTCTCTTTTCTCCACCGAGCCACCGGTATTGCTATGGCTATCGTGTGGTCATCTGTAGGGATCGGTGCTTTCTTTTTCACTGGGCATTATGACTCTATACTTGACTATGTGAGGAACATGCATTTGGG TACTTCTGTTATAGCTGCATGCAAGTTTATTCTATGTTACCCATTGGTTTACCACTATTTGAACGGGATGAGACATCTGGCTTGGG ACTACGCTATTGGCTTTCCTATCAAAACATGTAATACAACTGGATTTATTGCTTTAGGATCATCTTTAGTTATTTCTGCTATCCTAGCTTGCATCCGATTATAACATTGTCCTATCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD144624             [                                                                                                                                                                                                                                                                                                                           TTTCTCCACCGAGCCACTGGTATTGCTATGGCTATCGTGTGGTCATCTGTAGGGATCGGTGCTTTCTTTTTCACTGGGCATTATGACTCTATACTTGACTATGTGAAGAACATGCATTTGGG TACTTCTGTTATAGCTGCATGCAAGTTTATTCTATGTTACCCATTGGTTTACCACTATTTGAACGGGATGAGACATCTGGCTTGGG ACTACGCTATTGGCTTTCCTATCAAAACATGTAATACAACTGGATTTATTGCTTTAGGATCATCTTTAGTTATTTCTGCTATCTTAGCTTGCATCCGATTATAACATTGTCCTATCGGATATTCTCTGGGTTCATCTT                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD080685             [                                                                                                                                                                                                                                                                                                                                                                             AGGGATCGGTGCTTTCTTTTTCACTGGGCATTATGACTCTATACTTGACTATGTGAGGAACATGCATTTGGG TACTTCTGTTATAGCTGCATGCAAGTTTATTCTATGTTACCCATTGGTTTACCACTATTTGAACGGGATGAGACATCTGGCTTGGG ACTACGCTATTGGCTTTCCTATCAAAACATGTAATACAACTGGATTTATTGCTTTAGGATCATCTTTAGTTATTTCTGCTATCTTAGCTTGCATCCGATTATAACATTGTCCTATCGGATATTCTCTGGGTTCATCTTGTTATTTTCTCCGTTTCCTATTGATTATATGTTGTCAAAACATAATTTTTCGTTCGTAAATATGACTTTTAGTACTTATATTTGTATTTTTTCTACAAATACATTAACGATTGCGTTGTCTCATGACGAAAGATATCTTCATTCACTATAACACTTACACTACTTGGTTTATGTGTGTGTGATCAGTGTAATGAATAGTTGATGACGTTGTGTGACATTGTTCAGAATTGGTCGCAATGGCGCAAATACATTTACATTATCTTATCCTTATTATCCATCGGATTCTTTCCTTTTCAAATGATGTTCTCTATCTTTTCAAATAAACTGAGTATCATGTGAAATGTTAATCGTAAAAT ATCATGTATTTGTGACATCCC ATCAATAGAAGTTAGA                       ]
[-] EMBL CD074609             [                                                                                                                                                                                                                                                                                                                                                                                                                                  TGAGGAACATGCATTTGGG TACTTCTGTTATAGCTGCATGCAAGTTTATTCTATGTTACCCATTGGTTTACCACTATTTGAACGGGATGAGACATCTGGCTTGGG ACTACGCTATTGGCTTTCCTATCAAAACATGTAATACAACTGGATTTATTGCTTTAGGATCATCTTTAGTTATTTCTGCTATCTTAGCTTGCATCCGATTATAACATTGTCCTATCGGATATTCTCTGGGTTCATCTTGTTATTTTCTCCGTTTCCTATTGATTATATGTTGTCAAAACATAATTTTTCGTTCGTAAATATGACTTTTAGTACTTATATTTGTATTTTTTCTACAAATACATTAACGATTGCGTTGTCTCATGACGAAAGATATCTTCATTCACTATAACACTTACACTACTTGGTTTATGTGTGTGTGATCAGTGTAATGAATAGTTGATGACGTTGTGTGACATTGTTCAGAATTGGTCGCAATGGCGCAAATACATTTACATTATCTTATCCTTTTTATCCATCGGATTCTTTCCTTTTCAAATGATGTTCTCTATCTTTTCAAATAAACTGAGTATCATGTGAAATGTTAATCGTAAAATAATGATGTATTTGTGACATCCCAATCAATAGAAGTTAG                        ]
[+] EMBL CD064843             [                                                                                                                                                                                                                                                                                                                                                                                                                                              ATTTGGGCCACTTCTGTTATAGCTGCATGCAAGTTTATTCTATGTTACCCATTGGTTTACCACTATTTGAACGGGATGAGACATCTGGCTTGGG ACTACGCTATTGGCTTTCCTATCAAAACATGGAATACAACTGGATTTATTGCTTTAGGATCATCTTTAGTTATTTCTGCTATCTTAGCTTGCATCCGATTATAACATTGTCCTATCGGATATTCTCTGGGTTCATCTTGTTATTTTCTCCGTTTCCTATTGATTATATGTTGTCAAAACATAATTTTTCGTTCGTAAATATGACTTTTAGTACTTATATTTGTACTTTTTCTACAAATACATTAACGATTGCGTTGTCTCATGACGAAAGATATCTTCATTCACTATAACACTTACACTACTTGGTTTATGTGTGTGTGATCAGTGTAATGAATAGTTGATGACGTTGTGTGACATTGT                                                                                                                                                                                                     ]
[-] EMBL AI395078             [                                                                                                                                                                                                                                                                                                                                                                                                                                                              tctTAGCTGCATGCAAGTTTATTCTATGTTACCCATTGGTTTACCACTATTTGAACGGGCTGAGACATCTGGCTTGGG ACTACGCTATTGGCTTTCCTATCAAAACATGTAATACAACTGGATGTATTGCTTTAGGATCATCTTTAGTTATTTCTGCTATCTTAGCTTGCATCCGATTATAACATTGTCCTATCGGATATTCTCTGGGTTCATCATGTTATTTTCTCCGTTTCCTACTGATTATATGTTGTCAAAACATAATTCTTCGTTCGTAAATATGACACTTAGTACCTATATTTGTATTTTTTCTACAAATACATTAACGATTGCGATGTCTCATGACGAAAaaaaaaaaa                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD076104             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  tgGGATGGGGNAAT CGCTATTGGCTTTCCTATCAAAACATGTAATACAACTGGATTTATTGCTTTAGGATCATCTTTAGTTATTTCTGCTATCTTAGCTTGCATCCGATTAATACATTGTCCTATCGGATATTCTCTGGGTTCATCTTGTTATTTTCTCCGTTTCTTATTGATTATATGTTGTCAAAACATAATTTTTCGTTCGTAAATATGACTT                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD090832             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AATACAACTGGATTTATTGCTTTAGGATCATCTTTAGTTATTTATGCTATCTTAGCTTGCATCCGATTATAGCATTGTCCTATCGGATATTCTCTGGGTTCATATTGTTATTTTCTCCGTTTCCTATTAATTATATGTTGTCAAAACATAATTTTTCGTTCGTAAATATGACTTTTAGTACTaacagcaag                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD072918             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CCGATTATAACATTGTCCTATCGGATATTCTCTGGGGTCATCTTGGTATTTTCTCCGGTTCCTATTGATTATATGTTGTCAAAACATAATTTTTCGTTCGTAAATATGACTTTTAGGACTTATATTTGTATTTTTTCTACAAATACATTAACGATTGCGTTGTCTCATGACGAAAGATATTTTCATTCCCTATAACACTTACCCTACTTGGGTTATGTGTGTGTGATCAGTGTAATGAATAGTTGATGACGTTGTGTGACATTGTTCAGAATTGGTCGCAATGGCGCAAATACATTTACATTATCTTATCCCTTTTATCCCTCGGATTCTTTCCTTTTCAAATGATGTTCTCTATCTTTTCAAATAAACTGAGTATCATGTGAAATGTTAATCGTAAAATAATCATGTATTTGTGACATCCCCATCAATAGAAGTTA                         ]
[-] EMBL AI395136             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ttcgTTCCTATTGA TATATG TG CCAAACTTA   TTTCGTTCGTAAAT TGACTTTT GTAC TATA TTGTA TTTTTCTAC AATACA TAACGA TGCGTTGT TCATGACGAAAG TATCTTCATTCACTATAACACTTACACTACTTGGTTTATGTGTGTGTGATCAGTGTAATGAATAGTTGATGACGTTGTGTGACATTGTTCAGAATTGGTCGCAATGGCGCAAATACATTTACATTATCTTATCCTTTTTATCCATCGGATTCTTTCCTTTTCAAATGATGTTCTCTATCTTTTCAAATAAACTGAGTATCATGTGAAATGTTAATCGTAAAATAATCATGTATTTGTGACATCCCAATCAATAGAAGTTAGAATTTCTGAAAAAAAAAAAAAAAA]
[-] EMBL AA999316             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TATTGATTATATGTTGTCAAAACATAATTTTTCGTTCGTAAATATGACTTTTAGTACTTATATTTGTATTTTTTCTACAAATACATTAACGATTGCGTTGTCTCATGACGAAAGATATCTTCATTCACTATAACACTTACACTACTTGGTTTATGTGTGTGTGATCAGTGTAATGAATAGTTGATGACGTTGTGTGACATTGTTCAGAATTGGTCGCAATGGCGCAAATACATTTACATTATCTT                                                                                                                                                           ]


>consensus_10818#0 CCGCCCCAAAAGAAATTGTGAGGAGTAGCGTAACGTTAATTTCGATAATGAGTTTTTCAC CTAGGTTGTGTTGCTTGCGAAACCTTACCGGTTTTAGCGAATTTTTTGGGCCAGTGTCCA AAGTTTCAGTAGGACTTTTACGACCATCGTCAATCGTACGTACATCTAAAGCGGCTAAAG GTAGTACGAGCGAGAAAGTCCGTAGGCAAGCTGAAAAGGAAATGCAGTCATTTTGGGACA GAAATGCTACGGAAAAGCGGCCGTGGTCTCCCCATCTTCAGGTTTACTCGTCACCTTTAG TAATGAGATTCTCTTTTCTCCACCGAGCCACTGGTATTGCTATGGCTATCGTGTGGTCAT CTGTAGGGATCGGTGCTTTCTTTTTCACTGGGCATTATGACTCTATACTTGACTATGTGA GGAACATGCATTTGGGTACTTCTGTTATAGCTGCATGCAAGTTTATTCTATGTTACCCAT TGGTTTACCACTATTTGAACGGGATGAGACATCTGGCTTGGGACTACGCTATTGGCTTTC CTATCAAAACATGTAATACAACTGGATTTATTGCTTTAGGATCATCTTTAGTTATTTCTG CTATCTTAGCTTGCATCCGATTATAACATTGTCCTATCGGATATTCTCTGGGTTCATCTT GTTATTTTCTCCGTTTCCTATTGATTATATGTTGTCAAAACATAATTTTTCGTTCGTAAA TATGACTTTTAGTACTTATATTTGTATTTTTTCTACAAATACATTAACGATTGCGTTGTC TCATGACGAAAGATATCTTCATTCACTATAACACTTACACTACTTGGTTTATGTGTGTGT GATCAGTGTAATGAATAGTTGATGACGTTGTGTGACATTGTTCAGAATTGGTCGCAATGG CGCAAATACATTTACATTATCTTATCCTTTTTATCCATCGGATTCTTTCCTTTTCAAATG ATGTTCTCTATCTTTTCAAATAAACTGAGTATCATGTGAAATGTTAATCGTAAAATAATC ATGTATTTGTGACATCCCAATCAATAGAAGTTAGAATTTCTGCAAAAAAAAAAAAAAA



consensusID : consensus_10818#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 141
fasta sequence
                              [TCCCCATCTTCAGGTTTCTCGTCACCTTCAGTAATGAGATCTCTTTTCTCCACCGAGCCACTGGTATTGCTATGGCTATCGTGTGGTCATCTGTAGGATCGTGCTCTTTTCACAGGCATATACCATCTACTAGGACCGACT]

[+] EMBL SMAA14120            [TCCCCATCTTCAGGTTTCTCGTCACCTTCAGTAATGAGATCTCTTTTCTCCACCGAGCCACTGGTATTGCTATGGCTATCGTGTGGTCATCTGTAGGATCGTGCTCTTTTCACAGGCATATACCATCTACTAGGACCGACT]


>consensus_10818#1 TCCCCATCTTCAGGTTTCTCGTCACCTTCAGTAATGAGATCTCTTTTCTCCACCGAGCCA CTGGTATTGCTATGGCTATCGTGTGGTCATCTGTAGGATCGTGCTCTTTTCACAGGCATA TACCATCTACTAGGACCGACT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10818#0      CCGCCCCAAAAGAAATTGTGAGGAGTAGCGTAACGTTAATTTCGATAATGAGTTTTTCAC 60
consensus_10818#1      ------------------------------------------------------------
                                                                                   

consensus_10818#0      CTAGGTTGTGTTGCTTGCGAAACCTTACCGGTTTTAGCGAATTTTTTGGGCCAGTGTCCA 120
consensus_10818#1      ------------------------------------------------------------
                                                                                   

consensus_10818#0      AAGTTTCAGTAGGACTTTTACGACCATCGTCAATCGTACGTACATCTAAAGCGGCTAAAG 180
consensus_10818#1      ------------------------------------------------------------
                                                                                   

consensus_10818#0      GTAGTACGAGCGAGAAAGTCCGTAGGCAAGCTGAAAAGGAAATGCAGTCATTTTGGGACA 240
consensus_10818#1      ------------------------------------------------------------
                                                                                   

consensus_10818#0      GAAATGCTACGGAAAAGCGGCCGTGGTCTCCCCATCTTCAGGTTTACTCGTCACCTTTAG 300
consensus_10818#1      ----------------------------TCCCCATCTTCAGGTTT-CTCGTCACCTTCAG 31
                                                   ***************** *********** **

consensus_10818#0      TAATGAGATTCTCTTTTCTCCACCGAGCCACTGGTATTGCTATGGCTATCGTGTGGTCAT 360
consensus_10818#1      TAATGAGAT-CTCTTTTCTCCACCGAGCCACTGGTATTGCTATGGCTATCGTGTGGTCAT 90
                       ********* **************************************************

consensus_10818#0      CTGTAGGGATCGGTGCTTTCTTTTTCACTGGGCATTATGACTCTATACTTGACTATGTGA 420
consensus_10818#1      CTGTAGG-ATCG-TGCTCTTTTCACAGGCATATACCATC-TACTAGGACCGACT------ 141
                       ******* **** **** * **           *  **    ***     ****      

consensus_10818#0      GGAACATGCATTTGGGTACTTCTGTTATAGCTGCATGCAAGTTTATTCTATGTTACCCAT 480
consensus_10818#1      ------------------------------------------------------------
                                                                                   

consensus_10818#0      TGGTTTACCACTATTTGAACGGGATGAGACATCTGGCTTGGGACTACGCTATTGGCTTTC 540
consensus_10818#1      ------------------------------------------------------------
                                                                                   

consensus_10818#0      CTATCAAAACATGTAATACAACTGGATTTATTGCTTTAGGATCATCTTTAGTTATTTCTG 600
consensus_10818#1      ------------------------------------------------------------
                                                                                   

consensus_10818#0      CTATCTTAGCTTGCATCCGATTATAACATTGTCCTATCGGATATTCTCTGGGTTCATCTT 660
consensus_10818#1      ------------------------------------------------------------
                                                                                   

consensus_10818#0      GTTATTTTCTCCGTTTCCTATTGATTATATGTTGTCAAAACATAATTTTTCGTTCGTAAA 720
consensus_10818#1      ------------------------------------------------------------
                                                                                   

consensus_10818#0      TATGACTTTTAGTACTTATATTTGTATTTTTTCTACAAATACATTAACGATTGCGTTGTC 780
consensus_10818#1      ------------------------------------------------------------
                                                                                   

consensus_10818#0      TCATGACGAAAGATATCTTCATTCACTATAACACTTACACTACTTGGTTTATGTGTGTGT 840
consensus_10818#1      ------------------------------------------------------------
                                                                                   

consensus_10818#0      GATCAGTGTAATGAATAGTTGATGACGTTGTGTGACATTGTTCAGAATTGGTCGCAATGG 900
consensus_10818#1      ------------------------------------------------------------
                                                                                   

consensus_10818#0      CGCAAATACATTTACATTATCTTATCCTTTTTATCCATCGGATTCTTTCCTTTTCAAATG 960
consensus_10818#1      ------------------------------------------------------------
                                                                                   

consensus_10818#0      ATGTTCTCTATCTTTTCAAATAAACTGAGTATCATGTGAAATGTTAATCGTAAAATAATC 1020
consensus_10818#1      ------------------------------------------------------------
                                                                                   

consensus_10818#0      ATGTATTTGTGACATCCCAATCAATAGAAGTTAGAATTTCTGCAAAAAAAAAAAAAAA 1078
consensus_10818#1      ----------------------------------------------------------
                                                                                 




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)