These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10826#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1155 fasta sequence [GCCAAGAGTTCGGCACGAGGGCCGCTCCTGCACCCAAGTGAACGTCGAAATACAACGTGCTACAGTTTGGCTTAGATGGTTACTCACGCACACTGCTCTTCATAGTTCCCAGACACACAACCTACCTCCAAGCTAGACGCAAATTAACCAAAGGCTGAAATCGGTATCTGTATTTTGTTTAGACTGTGTTTCCACTTCAAGCCAAAAATTTAGCCATTTGGCAAATTGTTACTCTGGAACACATGGTAACCTCGAAATGGATTTCCTCACTTGTGCTTCATGCATGAGAAATGGAATATGTTTACCTGTTACAAGTGTCAAATGTATGGTGGGAAACGAGTTAATTTTTTGTCAAAATAAAGAGTGCATACACTATTTCCTACCATTGAATATCCTATCTTTTAAACATGACTCAACCGGTGAGTGTGAATATCCTGCCTGTAAACAGTTATTGTTTCAATTAATTGGTTTTTGTTTTGATTTTCATATTGTAATTGTTGTGTAAGCTTCGTCCTTGGTCGGCGTGTTCTCATGGCATATACTGTCCTGATAGAACACTGCCTTTTTTCTTTTCCAAGGTTTATTAGCATGATTAAATGCCCGAACAAGTATTGTGTCAGAGAATATAAAGTTTCTCANAGTTTCAGAAATATCTCGTCATACTGACCGCCACGAAGTTAAAGACGAGTTGAAATGGACAACTGAAGCGTTTCATGCTCCATTAAGAAGATCGGAAACATTGTCCAGTGCCAAGTCAAGTGGAGAAATTACAATCACGACAGATACTGTTATGAGCTTGCACGCCTTCGAAAATATGGCCCCTAAAACAAAAAATATGACTTCGAAATTTTCTAATACTGTTGTAACCAATGAAACTTGCTCTTTATCTACATCACATTCTGGTTCCCGGACCACTTACAGTCATTACAAGCGATCCATTTTACGACAAGTAAAACGTCAAGCAGATAACCTTCGATTAAAGCTTGTTAAAGAGCGTCGTACAATAAGTCACGAACGATTGGTTGATCCACTCCTGTCCACAAGGCAACGCTTTGTGTAGCTTAAATGTACATACTCTACTGATCGTACTAACTTTGTAGGTATATTGTAAATAGTTAACATAAAACTGTTTTTTTGTTTAAAAAAAAAGTTAAA] [+] EMBL CD079552 [GCCAAGAGTTCGGCACGAGGGCCGCTCCTGCACCCAAGTGAACGTCGAAATACAACGTGCTACAGTTTGGCTTAGATGGTTACTCACGCACACTGCTCTTCATAGTTCCCAGACACACAACCTACCTCCAAGCTAGACGCAAATTAACCAAAGGCTGAAATCGGTATCTGTATTTTGTTTAGACTGTGTTTCCACTTCAAGCCAAAAATTTAGCCATTTGGCAAATTGTTACTCTGGAACACATGGTAACCTCGAAATGGATTTCCTCACTTGTGCTTCATGCATGAGAAATGGAATATGTTTACCTGTTACAAGTGTCAAATGTATGGTGGGAAACGAGTTAATTTTTTGTCAAAATAAAGAGTGCATACACTATTTCCTACCATTGAATATCCTATCTTTTAAACATGACTCAACCGGTGAGTGTGAATATCCTGCCTGTAAACAGTTATTGTTTCAATTAATTGGTTTTTGTTTTGATTTTCATATTGTAATTGTTGTGTAAGCTTCGTCCTTGGTCGGCGTGTTCTCATGGCATATACTGTCCTGATAGAACACTGCCTTTTTTCTTTTCCAAGGTTTATTAGCATGATTAAATGCCCGAACAAGTATTGTGTCAGAGAATATAAAGTTTCTCANAGTTTCAGAAATATCTCGTCATACTGAC ] [+] EMBL CD077431 [ ggccaGAATTCGGCACGAGGATTTTGTTTAGACTGTGTTTCCACTTCAAGCCAAAAATTTAGCCATTTGGCAAATTGTTACTCTGGAACACATGGTAACCTCGAAATGGATTTCCTCACTTGTGCTTCATGCATGAGAAATGGAATATGTTTACCTGTTACAAGTGTCAAATGTATGGTGGGAAACGAGTTAATTTTTTGTCAAAATAAAGAGTGCATACACTATTTCC ] [-] EMBL CD073819 [ GGCATATACTGTCCTGATAGAACACTGCCTTTTTTCTTTTCCAAGGTTTATTAGCATGATTAAATGCCCGAACAAGTATTGTGTCAGAGAATATAAAGTTTCTCAAAGTTTCAGAAATATCTCGTCATACTGACCGCCACGAAGTTAAAGACGAGTTGAAATGGACAACTGAAGCGTTTCATGCTCCATTAAGAAGATCGGAAACATTGTCCAGTGCCAAGTCAAGTGGAGAAATTACAATCACGACAGATACTGTTATGAGCTTGCACGCCTTCGAAAATATGGCCCCTAAAACAAAAAATATGACTTCGAAATTTTCTAATACTGTTGTAACCAATGAAACTTGCTCTTTATCTACATCACATTCTGGTTCCCGGACCACTTACAGTCATTACAAGCGATCCATTTTACGACAAGTAAAACGTCAAGCAGATAACCTTCGATTAAAGCTTGTTAAAGAGCGTCGTACAATAAGTCACGAACGATTGGTTGATCCACTCCTGTCCACAAGGCAACGCTTTGTGTAGCTTAAATGTACATACTCTACTGATCGTACTAACTTTGTAGGTATATTGTAAATAGTTAACATAAAACTGTTTTTTTGTTTAAAAAAAAAGTTAAA] consensusID : consensus_10826#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 1052 fasta sequence [TCGCATACGTAATGCAGCTGCATGGCATGTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAACCAAAATTTATATTTTTTTTTTTAAAGGCCAATAATAATCTAAAAAAGTCATCCTTGTTTAAAGCACGGGCACGCTTTTTTTCAAAACCTGAGTCTCGAAGTATGTTTGTTATTTTCTCCTCCATTGCTGAAACACCAGTAGACTCACAGGCAATAGCCTCTGGAGTTGGTGACAATCCTTTTGTGCAACAAGTCTCCATGTAAATTTTACGTAAATGAGAAGCTATCGATTTGCCGCTAAAGTTAGCTCCGATCGTTTTGTTTTTGCGAGCAAACACAAGACGCAGTAGTCCATCCCATTCTGAATGCATTACAGGCGGTAATGGATGCCTGGGCTCAATCCGAACAACAGCTGAATCAACACGTGGTGGGGGA-CGAAAACTGTTTCTATTGATTTTCATCAACTGTTCAATTT-TGAAGTGAAACTGAGCAGATGCTGACAGACGACAGTATAATTTATCTCCAGATTTAGCCGTAAGACGGTCAGCGAATTCTTTCTGAAGCATAACAACCGCTGCTCTAAAACCATGACCTGCACTAATCAGTCTTTGGATGAATGGCGAAGAGATCTTATACGGCAGGTTCGCTATGCAGAGATCGAACTTGGGCCATGATTTTGCCTTGATTGCATCGCCAACGAGAATTTCTAGTTTGGTTCGATGTAGTGAGGTTTGCACACGCTTTTGCAATTCTGAAACCATTCTTGGATCTATTTCGAACGCGTACACTTTCCTTCCCTTTTCTAACAACTTGACAGTGAGATTACCAGTTCCAGAACCAATTTCCAGCAAGGAGTCTGTGGACTTGATACCAGACTTTTCCACCATTGTGTTAATAACGAGGGGATTTTTCAGTATATGCTGACCTTTTGTCTTCTGAAACCGGATACCGCCTGTTTTAATAGCTAAACTAGAGGAATCAAATTTTGGTTTGACCATTGTATATGCTTTTTTCGAAAACCAAGCCCCTGATGGGCTTATTTGTGGTCTGTA] [+] EMBL AI977083 [TCGCATACGTAATGCAGCTGCATGGCATGTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAACCAAAATTTATATTTTTTTTTTTAAAGGCCAATAATAATCTAAAAAAGTCATCCTTGTTTAAAGCACGGGCACGCTTTTTTTCAAAACCTGAGTCTCGAAGTATGTTTGTTATTTTCTCCTCCATTGCTGAAACACCAGTAGACTCACAGGCAATAGCCTCTGGAGTTGGTGACAATCCTTTTGTGCAACAAGTCTCCATGTAAATTTTACGTAAA ] [+] EMBL AI395402 [ TTTTTTTTTTTTTTTTCAACCAAAATTTATATTTACTTTTTTAAAGGCCAATAATAATCTAAGAAAGTCATCCTCGTCTAAAGCACGGGCACGCTTTTTTTCAAAACCTGAGTCTCGAAGTATGTTTGTTATTTTCTCCTCCATTGCTGAAACACCAGTAGACTCACAGGCAATAGCCTCTGGAGTTGGAGACAATCCTTTTGTGCAACAAGTCTCCATGTAAATTTTACGTAAATGAGAAGCTATCGATTTGCCGCTAAAGTTAGCTCCGATCGTTTTGTTTTTGCGAGCAAACACAAGACGCAGTAGTCCATCCCATTCTGAATGCATTACAGGTGGTAATGGATGCCTGGGCTCAATCCGAGCAACAGCTGAATCATCACGTGGTGGGGGACCGAATACTGATTCTATTGCTTTTCAGCAACTGCTCATTTTATGAGGTG AACTGATCAGATGCTGTCAG ] [+] EMBL CD191502 [ AGTCTCGAAGTATGTTTGTTATTTTCTCCTCCATTGCTGAAACACCAGTAGACTCACAGGCAATAGCCTCTGGAGTTGGTGACAATCCTTTTGTGCAACAAGTCTCCATGTAAATTTTACGTAAATGAGAAGCTATCGATTTGCCGCTAAAGTTAGCTCCGATCGTTTTGTTTTTGCGAGCAAACACAAGACGCAGTAGTCCATCCCATTCTGAATGCATTACAGGCGGTAATGGATGCCTGGGCTCAATCCGAACAACAGCTGAATCAACACGTGGTGGGGGA CGAAAACTGTTTCTATTGATTTTCATCAACTGTTCAATTT TGAAGTGAAACTGAGCAGATGCTGACAGACGACAGTATAATTTATCTCCAGATTTAGCCGTAAGACGGTCAGCGAATTCTTTCTGAAGCATAACAACCG ] [-] EMBL CD191512 [ AGACTCACAGGCAATAGCCTCTGGAGTTGGTGACAATCCTTTTGTGCAACAAGTCTCCATGTAAATTTTACGTAAATGAGAAGCTATCGATTTGCCGCTAAAGTTAGCTCCGATCGTTTTGTTTTTGCGAGCANACACAAGACGCAGTAGTCCATCCCATTCTGAATGCATTACAGGCGGTAATGGATGCCTGGGCTCAATCCGAACAACAGCTGAATCAACACGTGGTGGGGGA CGAAAACTGTTTCTATTGATTTTCATCAACTGTTCAATTT TGAAGTGAAACTGAGCAGATGCTGACAGACGACAGTATAATTTATCTCCAGATTTAGCCGTAAGACGGTCAGCGAATTCTTTCTGAAGCATAACAACCGCTGCTCTAAAACCATGACCTGCACTAATCAGTCTTTGGATGAATGGCGAA ] [-] EMBL CD191530 [ CGAACAACAGCTGAATCAACACGTGGTGGGGGA CGAAAACTGTTTCTATTGATTTTCATCAACTGTTCAATTT TGAAGTGAAACTGAGCAGATGCTGACAGACGACAGTATAATTNATCTCCAGATTTAGCCGTAAGACGGTCAGCGAATTCTTTCTGAAGCATAACAACCGCTGCTCTAAAACCATGACCTGCACTAATCAGTCTTTGGATGAATGGCGAAGAGATCTTATACGGCAGGTTCGCTATGCAGAGATCGAACTTGGGCCATGATTTTGCCTTGATTGCATCGCCAACGAGAATTTCTAGTTTGGTTCGATGTAGTGAGGTTTGCACACGCTTTTGCAATTCTGAAACCATTCTTGGATCTATTTCGAACGCGTACACTTTCCTTCCCTTTTCTAACAACTTGACAGTGAGATTACCAGTTCCAGAACCAATTTCCAGCAAGGAGTCTGTGGACTTGATACCA ] [-] EMBL CD191516 [ AACAACAGCTGAATCAACACGTGGTGGGGGA CGAAAACTGTTTCTATTGATTTTCATCAACTGTTCAATTT TGAAGTGAAACTGAGCAGATGCTGACAGACGACAGTATAATTTATCTCCAGATTNAGCCGTAAGACGGTCAGCGAATTCTTTCTGAAGCATAACAACCGCTGCTCTAAAACCATGACCTGCACTAATCAGTCTTTGGATGAATGGCGAAGAGATCTTATACGGCAGGTTCGCTATGCAGAGATCGAACTTGGGCCATGATTTTGCCTTGATTGCATCGCCAACGAGAATTTCTAGTTTGGTTCGATGTAGTGAGGTTTGCACACGCTTTTGCAATTCTGAAACCATTCTTGGATCTATTTCGAACGCGTACACTTTCCTTCCCTTTTCTAACAACTTGACAGTGAGATTACCAGTTCCAGAACCAATTTCCAGCAAGGAGTCTGTGGACTTGATACCA ] [-] EMBL CD083627 [ CAACACGTGTTGGGGGA CGAAAACTGTTTCTAGTGATTTTCATCAACTGTTCAATTT TGAAGTGAAACTGAGCAGATGCTGACAGACGACAGTATAATTTATCTCCAGATTTAGCCGTAAGACGGTCAGCGAATTCTTTCTGAAGCATAACAACCGCTGCTCTAAAACCATGACCTGCACTAATCAGTCTTTGGATGAATGGCGAAGAGATCTTATACGGCAGGTTCGCTATGCAGAGATCGAACTTGGGCCATGATTTTGCCTTGATTGCATCGCCAACGAGAATTTCTAGTTTGGTTCGATGTAGTGAGGTTTGCACACGCTTTTGCAATTCTGAAACCATTCTTGGATCTATTTCGAACGCGTACACTTTCCTTCCCTTTTCTAACAACTTGACAGTGAGATTACCAGTTCCAGAACCAATTTCCAGCAAGGAGTCTGTGGACTTGATACCAGACTTTTCCAaaaaaag ] [-] EMBL CD191503 [ GGGGGA CGAAAACTGTTTCTATTGATTTTCATCAATTGTTCAATTT TGAAGTGAAACTGAGCAGATGCTGACAGACGACAGTATAATTGATCTCCAGATTTAGCCGTAAGACGGTCAGCGAATTCTTTCTGAAGCATAACAACCGCTGCTCTAAAACCATGACCTGCACTAATCAGTCTTTGGATGAATGGCGAAGAGATCTTATACGGCAGGTTCGCTATGCAGAGATCGAACTTGGGCCATGATTTTGCCTTGATTGCATCGCCAACGAGAATTTCTAGTTTGGTTCGATGTAGTGAGGTTTGCACACGCTTTTGCAATTCTGAAACCATTCTTGGATCTATTTCGAACGCGTACACTTTCCTTCCCTTTTCTAACAACTTGACAGTGAGATTACCAGTTCCAGAACCAATTTCCAGCAAGGAGTCTGTGGACTTGATACCA ] [-] EMBL CD191562 [ AACTGTTTCTATTGATTTTCATCAACTGTTCAATTT TGAAGTGAAACTGAGCAGATGCTGACAGACGACAGTATAATTGATCTCCAGATTTAGCCGTAAGACGGTCAGCGAATTCTTTCTGAAGCATAACAACCGCTGCTCTAAAACCATGACCTGCACTAATCAGTCTTTGGATGAATGGCGAAGAGATCTTATACGGCAGGTTCGCTATGCAGAGATCGAACTTGGGCCATGATTTTGCCTTGATTGCATCGCCAACGAGAATTTCTAGTTTGGTTCGATGTAGTGAGGTTTGCACACGCTTTTGCAATTCTGAAACCATTCTTGGATCTATTTCGAACGCGTACACTTTCTTTCCCTTTTCTAACAACTTGACAGTGAGATTACCAGTTCCAGAACCAATTTCCAGCAAGGAGTCTGTGGACTTGATACCA ] [-] EMBL CD191514 [ ACTGTTTCTATTGATTTTCATCAACTGTTCAATTT TGAAGTGAAACTGAGCAGATGCTGACAGACGACAGTATAATTTATCTCCAGATTTAGCCGTAAGACGGTCAGCGAATTCTTTCTGAAGCATAACAACCGCTGCTCTAAAACCATGACCTGCACTAATCAGTCTTTGGATGAATGGCGAAGAGATCTTATACGGCAGGTTCGCTATGCAGAGATCGAACTTGGGCCATGATTTTGCCTTGATTGCATCGCCAACGAGAATTTCTAGTTTGGTTCGATGTAGTGAGGTTTGCACACGCTTTTGCAATTCTGAAACCATTCTTGGATCTATTTCGAACGCGTACACTTTCCTTCCCTTTTCTAACAACTTGACAGTGAGATTACCAGTTCCAGAACCAATTTCCAGCAAGGAGTCTGTGGACTTGATACCA ] [-] EMBL CD191489 [ TTTCTATTGATTTTCATCAACTGTTCAATTT TGAAGTGAAACTGAGCAGATGCTGACAGACGACAGTATAATTTATCTCCAGATTTAGCCGTAAGACGGTCAGCGAATTCTTTCTGAAGCATAACAACCGCTGCTCTAAAACCATGACCTGCACTAATCAGTCTTTGGATGAATGGCGAAGAGATCTTATACGGCAGGTTCGCTATGCAGAGATCGAACTTGGGCCATGATTTTGCCTTGATTGCATCGCCAACGAGAATTTCTAGTTTGGTTCGATGTAGTGAGGTTTGCACACGCTTTTGCAATTCTGAAACCATTCTTGGATCTATTTCGAACGCGTACACTTTCCTTCCCTTTTCTAACAACTTGACAGTGAGATTACCAGTTCCAGAACCAATTTCCAGCAAGGAGTCTGTGGACTTGATACCA ] [-] EMBL CD191537 [ TTCATCAACTGTTCAATTT TGAAGTGAAACTGAGCAGATGCTGACAGACGACAGTATAATTTATCTCCAGATTTAGCCGTAAGACGGTCAGCGAATTCTTTCTGAAGCATAACAACCGCTGCTCTAAAACCATGACCTGCACTAATCAGTCTTTGGATGAATGGCGAAGAGATCTTATACGGCAGGTTCGCTATGCAGAGATCGAACTTGGGCCATGATTTTGCCTTGATTGCATCGCCAACGAGAATTTCTAGTTTGGTTCGATGTAGTGAGGTTTGCACACGC TTTGCAATTCTGAAACCGTTCTTGGATCTATTTCGAACGCGTACACTTTCCTTCCCTTTTCTAACAACTTGACAGTGAGATTACCAGTTCCAGAACCAATTTCCAGCAAGGAGTCTGTGGACTTGATACCA ] [-] EMBL CD191553 [ AACTGTTCAATTT TGAAGTGAAACTGAGCAGATGCTGACAGACGACAGTATAATTTATCTCCAGATTTAGCCGTAAGACGGTCAGCGAATTCTTTCTGAAGCATAACAACCGCTGCTCTAAAACCATGACCTGCACTAATCAGTCTTTGGATGAATGGCGAAGAGATCTTATACGGCAGGTTCGCTATGCAGAGATCGAACTTGGGCCATGATTTTGCCTTGATTGCATCGCCAACGAGAATTTCTAGTTTGGTTCGATGTAGTGAGGTTTGCACACGCTTTTGCAATTCTGAAACCATTCTTGGATCTATTTCGAACGCGTACACTTTCCTTCCCTTTTCTAACAACTTGACAGTGAAATTACCAGTTCCAGAACCAATTTCCAGCAAGGAGTCTGTGGACTTGATACCA ] [-] EMBL CD071680 [ CAGTATAATTAATCTCCAGATTTAGCCGTAAGACGGTCAGCGAATTCTTTCTGAAGCATAACAACCGCTGCTCTAAAACCATGACCTGCACTAATCAGT ] [-] EMBL CD114911 [ CCGCTGCTCTAAAACCATGACCTGCACTAATCAGTCTTTGGATGAATGGCGAAGAGATCTTATACGGCAGGTTCGCTATGCTGAGATCGAACTTGGGCCATGATTTTGCCTTGATTGCATCGCCAACGAGAATTTCTAGTTTGGTTCGATGTAGTGAGGTTTGCACACGCTTTTGCAATTCTGAAACCATTCTTGGATCTATTTCGAACGCGTACACTTTCCTTCCCTTTTCTAACAACTTGACAGTGAGATTACCAGTTCCAGAACCAATTTCCAGCAAGGAGTCTGTGGACTTGATACCAGACTTTTCCACCATTGTGTTAATAACGAGGGGATTTTTCAGTATATGCTGACCTTTTGTCTTCTGAAACCGGATACCGCCTGTTTTAATAGCTAAACTAGAGGAATCAAATTTTGGTTTGACCATTGTATATGCTTTTTTCGAAAACCAAGCCCCTGATGGGCTTATTTGTGGTCTGTA] [-] EMBL CD114910 [ CCGCTGCTCTAAAACCATGACCTGCACTAATCAGTCTTTGGATGAATGGCGAAGAGATCTTATACGGCAGGTTCGCTATGCTGAGATCGAACTTGGGCCATGATTTTGCCTTGATTGCATCGCCAACGAGAATTTCTAGTTTGGTTCGATGTAGTGAGGTTTGCACACGCTTTTGCAATTCTGAAACCATTCTTGGATCTATTTCGAACGCGTACACTTTCCTTCCCTTTTCTAACAACTTGACAGTGAGATTACCAGTTCCAGAACCAATTTCCAGCAAGGAGTCTGTGGACTTGATACCAGACTTTTCCACCATTGTGTTAATAACGAGGGGATTTTTCAGTATATGCTGACCTTTTGTCTTCTGAAACCGGATACCGCCTGTTTTAATAGCTAAACTAGAGGAATCAAATTTTGGTTTGACCATTGTATATGCTTTTTTCGAAAACCAAGCCCCTGATGGGCTTATTTGTGGTCTGTA] consensusID : consensus_10826#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 885 fasta sequence [CCCTCGAGCCAANAATTCGGCACGAGGCGAACAAGTATTGTGTCAGAGAATATAAAGTTTCTCAAAGTTTCAGAAATATCTCGTCATACTGACCGCCACGAAGTTAAAGACGAGTTGAAATGGACAACTGAAGCGTTTCATGCTCCATTAAGAAGATCGGAAACATTGTCCAGTGCCAAGTCAAGTGGAGAAATTACAATCACGACAGATACTGTTATGAGCTTGCACGCCTTCGAAAATATGGCCCCTAAAACAAAAAATATGACTTCGAAATTTTCTAATACTGTTGTAACCAATGAAACTTGCTCTTTATCTACATCACATTCTGGTTCCCGGACCACTTACAGTCATTACAAGCGATCCATTTTACGACAAGTAAAACGTCAAGCAGATAACCTTCGATTAAAGCTTGTTAAAGAGCGTCGTACAATAAGTCACGAACGATTGGTTGATCCACTCCTGTCCACAAGGCAACGCTTTGTGTAGCTTAAATGTACATACTCTACTGATCGTACTAACTTTGCCAATAATAATCTAAGAAAGTCATCCTCGTCTAAAGCACGGGCACGCTTTTTTTCAAAACCTGAGTCTCGAAGTATGTTTGTTATTTTCTCCTCCATTGCTGAAACACCAGTAGACTCACAGGNCATAGCCTCTGGAGTTGGTGACAATCCTTTTGTGCAACAAGTCTNNCATGTAATTTTACGTAAATGAGAAGCTATCGATTTGCCGCTAAAGTAGCTNCGATCGTTNTGTTTTTGCGAGCAACACAGACGCAGTAGTCATCCATTCTGATGCATACAGCGGTATGGATGCCTGGCTCNATCGACACAGCTGATCACCACGTGTGGGGGAGAAACTGNTNCTATGATCTATATTAAATAN] [+] EMBL CD081963 [CCCTCGAGCCAANAATTCGGCACGAGGCGAACAAGTATTGTGTCAGAGAATATAAAGTTTCTCAAAGTTTCAGAAATATCTCGTCATACTGACCGCCACGAAGTTAAAGACGAGTTGAAATGGACAACTGAAGCGTTTCATGCTCCATTAAGAAGATCGGAAACATTGTCCAGTGCCAAGTCAAGTGGAGAAATTACAATCACGACAGATACTGTTATGAGCTTGCACGCCTTCGAAAATATGGCCCCTAAAACAAAAAATATGACTTCGAAATTTTCTAATACTGTTGTAACCAATGAAACTTGCTCTTTATCTACATCACATTCTGGTTCCCGGACCACTTACAGTCATTACAAGCGATCCATTTTACGACAAGTAAAACGTCAAGCAGATAACCTTCGATTAAAGCTTGTTAAAGAGCGTCGTACAATAAGTCACGAACGATTGGTTGATCCACTCCTGTCCACAAGGCAACGCTTTGTGTAGCTTAAATGTACATACTCTACTGATCGTACTAACTTTGCCAATAATAATCTAAGAAAGTCATCCTCGTCTAAAGCACGGGCACGCTTTTTTTCAAAACCTGAGTCTCGAAGTATGTTTGTTATTTTCTCCTCCATTGCTGAAACACCAGTAGACTCACAGGNCATAGCCTCTGGAGTTGGTGACAATCCTTTTGTGCAACAAGTCTNNCATGTAATTTTACGTAAATGAGAAGCTATCGATTTGCCGCTAAAGTAGCTNCGATCGTTNTGTTTTTGCGAGCAACACAGACGCAGTAGTCATCCATTCTGATGCATACAGCGGTATGGATGCCTGGCTCNATCGACACAGCTGATCACCACGTGTGGGGGAGAAACTGNTNCTATGATCTATATTAAATAN] [+] EMBL CD084269 [ ACGAGTTGAAATGGACAACTGAAGCGTTTCATGCTCCATTAAGAAGATCGGAAACATTGTCCAGTGCCAAGTCAAGTGGAGAAATTACAATCACGACAGATACTGTTATGAGCTTGCACGCCTTCGAAAATATGGCCCCTAAAACAAAAAATATGACTTCGAAATTTTCTAATACTGTTGTAACCAATGAAACTTGCTCTTTATCTACATCACATTCTGGTTCCCGGACCACTTACAGTCATTACAAGCGATCCATTTTACGACAAGTAAAACGTCAAGCAGATAACCTTCGATTAAAGCTTGTTAAAGAGCGTCGTACAATAAGTCACGAACGATTGGTTGATCCACTCCTGTCCACAAGGCAACGCTTTGTGTAGCTTAAATGTACATACTCTACTGATCGTACTAACTTTGCCAATAATAATCTAAGAAAGTCATCCTCGTCTAAAGCACGGGCACGCTTTTTTTCAAAACCTGAGTCTCGAAGTATGTTTGTTATTTTCTCCTCCATTGCTGAAACACCAGTAGA ] consensusID : consensus_10826#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 504 fasta sequence [TGGGAATTGGCCCTCAGGCCAGAATCGGCACGAGGTTTCCTAGTATCTCGTCATACTGACCGCCACGAAGTTAAAGACGAGTTGAAATGGACAACTGAAGCGTTTCATGCTCCATTAAGAAGATCGGAAACATTGTCCAGTGCCAAGTCAAGTGGAGAAATTACAATCACGACAGATACTGTTATGAGCTTGCACGCCTTCGAAAATATGGCCCCTAAAACAAAAAATATGACTTCGAAATTTTCTAATACTGTTGTAACCAATGAAACTTGCTCTTTATCTACATCACATTCTGGTTCCCGGACCACTTACAGTCATTACAAGCGATCCATTTTACGACAAGTAAAACGTCAAGCAGATAACCTTCGATTAAAGCTTGTTAAAGAGCGTCGTACAATAAGTCACGAACGATTGGTTGATCCACTCCTGTCCACAAGGCAACGCTTTGTGTAGCTTAAATGTACATACTCTACTGATCGTACTAACTTTGTAAATATATTGTAA] [+] EMBL CD084384 [TGGGAATTGGCCCTCAGGCCAGAATCGGCACGAGGTTTCCTAGTATCTCGTCATACTGACCGCCACGAAGTTAAAGACGAGTTGAAATGGACAACTGAAGCGTTTCATGCTCCATTAAGAAGATCGGAAACATTGTCCAGTGCCAAGTCAAGTGGAGAAATTACAATCACGACAGATACTGTTATGAGCTTGCACGCCTTCGAAAATATGGCCCCTAAAACAAAAAATATGACTTCGAAATTTTCTAATACTGTTGTAACCAATGAAACTTGCTCTTTATCTACATCACATTCTGGTTCCCGGACCACTTACAGTCATTACAAGCGATCCATTTTACGACAAGTAAAACGTCAAGCAGATAACCTTCGATTAAAGCTTGTTAAAGAGCGTCGTACAATAAGTCACGAACGATTGGTTGATCCACTCCTGTCCACAAGGCAACGCTTTGTGTAGCTTAAATGTACATACTCTACTGATCGTACTAACTTTGTAAATATATTGTAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10826#0 GCCAAGAGTTCGGCACGAGGGCCGCTCCTGCACCCAAGTGAACGTCGAAATACAACGTGC 60 consensus_10826#3 ------------------------------------------------------------ consensus_10826#2 ------------------------------------------------------------ consensus_10826#1 ------------------------------------------------------------ consensus_10826#0 TACAGTTTGGCTTAGATGGTTACTCACGCACACTGCTCTTCATAGTTCCCAGACACACAA 120 consensus_10826#3 ------------------------------------------------------------ consensus_10826#2 ------------------------------------------------------------ consensus_10826#1 ---------------------------------TCGCATACGTAATGCAGCTGCATGGCA 27 consensus_10826#0 CCTACCTCCAAGCTAGACGCAAATTAACCAAAGGCTGAAATCGGTATCTGTATTTTGTTT 180 consensus_10826#3 ------------------------------------------------------------ consensus_10826#2 ------------------------------------------------------------ consensus_10826#1 TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAA-CCAAAATTTATATTTTTTTTTTTAAA 86 consensus_10826#0 AGACTGTGTTTCCACTTCAAGCCAAAAATTTAGCCATTTGGCAAATTGTTACTCTGGAAC 240 consensus_10826#3 ------------------------------------------------------------ consensus_10826#2 ------------------------------------------------------------ consensus_10826#1 GGCCAATAATAATCTAAAAAAGTCATCCTTGTTTAAAGCACGGGCACGCTTTTTTTCAAA 146 consensus_10826#0 ACATGGTAACCTCGAAATGGATTTCCTCACTTGTGCTTCATGCATGAGAAATGGAATATG 300 consensus_10826#3 ------------------------------------------------------------ consensus_10826#2 ------------------------------------------------------------ consensus_10826#1 ACCTG--AGTCTCGAAGTATGTTTGTTATTTTCTCCTCCATTGCTGAAACACC-AGTAGA 203 consensus_10826#0 TTTACCTGTTACAAGTGTCAAATGTATGGTGGGAAACGAGTTAATTTTTTGTCAAAATAA 360 consensus_10826#3 ------------------------------------------------------------ consensus_10826#2 ------------------------------------------------------------ consensus_10826#1 CTCACAGGCAATA-GCCTCTGGAGT-TGGTGACAATC--------CTTTTGTGCAA--CA 251 consensus_10826#0 AGAGTGCATACACTATTTCCTACCATTGAATATCCTATCTTTTAAACATGACTCAACCGG 420 consensus_10826#3 ------------------------------------------------------------ consensus_10826#2 ------------------------------------------------------------ consensus_10826#1 AGTCTCCATGTAA-ATTTTACGTAAATGAGAAGCTATCGATTTGCCGCTAAAGTTAGCTC 310 consensus_10826#0 TGAGTGTGAATATCCTGCCTGTAAACAGTTATTGTTTCAATTAATTGGTTTTTGTTTTGA 480 consensus_10826#3 ------------------------------------------------------------ consensus_10826#2 ------------------------------------------------------------ consensus_10826#1 CGATCGTTTTGTTTTTGCGAGCAAACACAAGACGCAGTAGTCCATCCCATTCTGAATGCA 370 consensus_10826#0 TTTTCATATTGTAATTGTTGTGTAAGCTTCGTCCTTGGTCGGCGTGTTCTCATGGCATAT 540 consensus_10826#3 ------------------------------------------------------------ consensus_10826#2 ------------------------------------------------------------ consensus_10826#1 TTA-CAGGCGGTAATGGATGCCTGGGCTCAATCC--GAACAACAG---CTGAATCAACAC 424 consensus_10826#0 ACTGTCCTGATAGAACACTGCCTTTTTTCTTTTCCAAGGTTTATT-AGCATGATTAAATG 599 consensus_10826#3 ------------------------------------------------------------ consensus_10826#2 --------------------------------CCCTCGAGCCAAN-AATTCGGCACGAGG 27 consensus_10826#1 GTGGTGGGGGACGAAAACTGTTTCTATTGATTTTCATCAACTGTTCAATTTTGAAGTGAA 484 consensus_10826#0 CCCGAACAAGTATTGTGTCA-GAGAATATAAAGTTTCTCANAGTTTCAGAAATATCTCGT 658 consensus_10826#3 ------TGGGAATTGGCCCT-CAGGCCA-GAATCGGCACGAGGTTTCCTAG-TATCTCGT 51 consensus_10826#2 --CGAACAAGTATTGTGTCA-GAGAATATAAAGTTTCTCAAAGTTTCAGAAATATCTCGT 84 consensus_10826#1 ACTGAGCAGATGCTGACAGACGACAGTATAATTTATCTCCAGATTTAGCCGTAAGACGGT 544 ** * * * * * *** * ** consensus_10826#0 CATACTGACCGCCACGAAGTTAAAGACGAGTTGAAATGGACAACTGAAGCGTTTCATGCT 718 consensus_10826#3 CATACTGACCGCCACGAAGTTAAAGACGAGTTGAAATGGACAACTGAAGCGTTTCATGCT 111 consensus_10826#2 CATACTGACCGCCACGAAGTTAAAGACGAGTTGAAATGGACAACTGAAGCGTTTCATGCT 144 consensus_10826#1 CAGCGAATTCTTTCTGAAGCATAACAACCGCTGCTCTAAAACCATGACCTGCACTAATCA 604 ** * **** ** * * ** * * *** * * * consensus_10826#0 CCATTAAGAAGATCGGAAACATTGTCCAGTGC--CAAGTCAA--GTGGAGAAATTACAAT 774 consensus_10826#3 CCATTAAGAAGATCGGAAACATTGTCCAGTGC--CAAGTCAA--GTGGAGAAATTACAAT 167 consensus_10826#2 CCATTAAGAAGATCGGAAACATTGTCCAGTGC--CAAGTCAA--GTGGAGAAATTACAAT 200 consensus_10826#1 GTCTTTGGATGAATGGCGAAGAGATCTTATACGGCAGGTTCGCTATGCAGAGATCGAACT 664 ** ** ** ** * ** * * ** ** ** *** ** * * consensus_10826#0 CACGACA-GATACTGTTATGAGCTTGCA-CGCCTTCGAAAATATGGCCCCTAAAACAAAA 832 consensus_10826#3 CACGACA-GATACTGTTATGAGCTTGCA-CGCCTTCGAAAATATGGCCCCTAAAACAAAA 225 consensus_10826#2 CACGACA-GATACTGTTATGAGCTTGCA-CGCCTTCGAAAATATGGCCCCTAAAACAAAA 258 consensus_10826#1 TGGGCCATGATTTTGCCTTGA--TTGCATCGCCAACGAGAATTTCTAGTTTGGTTCGATG 722 * ** *** ** *** ***** **** *** *** * * * * consensus_10826#0 -AATATGACTTCGAAATTTTCTAATACTGTTGTAACCAATG--AAACTTGCTCTTTATC- 888 consensus_10826#3 -AATATGACTTCGAAATTTTCTAATACTGTTGTAACCAATG--AAACTTGCTCTTTATC- 281 consensus_10826#2 -AATATGACTTCGAAATTTTCTAATACTGTTGTAACCAATG--AAACTTGCTCTTTATC- 314 consensus_10826#1 TAGTGAGGTTTGCACACGCTTTTGCAATTCTGAAACCATTCTTGGATCTATTTCGAACGC 782 * * * ** * * * * * * ** ***** * * * * * consensus_10826#0 -TACATCACATTCTGGTTCCCGGACCACTT-ACAGTCA--TTACAAGC----GATCCATT 940 consensus_10826#3 -TACATCACATTCTGGTTCCCGGACCACTT-ACAGTCA--TTACAAGC----GATCCATT 333 consensus_10826#2 -TACATCACATTCTGGTTCCCGGACCACTT-ACAGTCA--TTACAAGC----GATCCATT 366 consensus_10826#1 GTACACTTTCCTTCCCTTTTCTAACAACTTGACAGTGAGATTACCAGTTCCAGAACCAAT 842 **** * ** * ** **** ***** * **** ** ** *** * consensus_10826#0 TTACGACAAGTAAAACGTCAAGCAGATAACCTTCGATTAAAGCTTGTTAAAGAGCGTCGT 1000 consensus_10826#3 TTACGACAAGTAAAACGTCAAGCAGATAACCTTCGATTAAAGCTTGTTAAAGAGCGTCGT 393 consensus_10826#2 TTACGACAAGTAAAACGTCAAGCAGATAACCTTCGATTAAAGCTTGTTAAAGAGCGTCGT 426 consensus_10826#1 TTCCAGCAAGGAGTCTGTGGACTTGATACCAGACTTTTCCACCATTGTGTTAATAACGAG 902 ** * **** * ** * **** * * ** * * * * * consensus_10826#0 ACAATAAGTCACGAACGATTGGTTGATCCACTCCTGTCCACAAGGCAACGCTTTGTGTAG 1060 consensus_10826#3 ACAATAAGTCACGAACGATTGGTTGATCCACTCCTGTCCACAAGGCAACGCTTTGTGTAG 453 consensus_10826#2 ACAATAAGTCACGAACGATTGGTTGATCCACTCCTGTCCACAAGGCAACGCTTTGTGTAG 486 consensus_10826#1 GGGATTTTTCAGTATATGCTGACCTTTTGTCTTCTGAA-ACCGGATACCGCCTGTTTTAA 961 ** *** * ** * ** *** ** * * *** * * ** consensus_10826#0 C--TTAAATGTACATACTCTACTGATCGTACTAACTTTGTAGGTA-TATTGTAAATAG-- 1115 consensus_10826#3 C--TTAAATGTACATACTCTACTGATCGTACTAACTTTGTAAATA-TATTGTAA------ 504 consensus_10826#2 C--TTAAATGTACATACTCTACTGATCGTACTAACTTTGCCAATAATAATCTAAGAAAGT 544 consensus_10826#1 TAGCTAAACTAGAGGAATCAAATTTTGGTTTGACCATTGTATATGCTTTTTTCGAAAA-- 1019 **** * ** * * * ** * * *** * * * * consensus_10826#0 ---------TTAACATAAAACTGTTTTTTTGTTTAAAAAAAAAGTTAAA----------- 1155 consensus_10826#3 ------------------------------------------------------------ consensus_10826#2 CATCCTCGTCTAAAGCACGGGCACGCTTTTTTTCAAAACCTGAGTCTCGAAGTATGTTTG 604 consensus_10826#1 ----CCAAGCCCCTGATGGGCTTATTTGTGGTCTGTA----------------------- 1052 consensus_10826#0 ------------------------------------------------------------ consensus_10826#3 ------------------------------------------------------------ consensus_10826#2 TTATTTTCTCCTCCATTGCTGAAACACCAGTAGACTCACAGGNCATAGCCTCTGGAGTTG 664 consensus_10826#1 ------------------------------------------------------------ consensus_10826#0 ------------------------------------------------------------ consensus_10826#3 ------------------------------------------------------------ consensus_10826#2 GTGACAATCCTTTTGTGCAACAAGTCTNNCATGTAATTTTACGTAAATGAGAAGCTATCG 724 consensus_10826#1 ------------------------------------------------------------ consensus_10826#0 ------------------------------------------------------------ consensus_10826#3 ------------------------------------------------------------ consensus_10826#2 ATTTGCCGCTAAAGTAGCTNCGATCGTTNTGTTTTTGCGAGCAACACAGACGCAGTAGTC 784 consensus_10826#1 ------------------------------------------------------------ consensus_10826#0 ------------------------------------------------------------ consensus_10826#3 ------------------------------------------------------------ consensus_10826#2 ATCCATTCTGATGCATACAGCGGTATGGATGCCTGGCTCNATCGACACAGCTGATCACCA 844 consensus_10826#1 ------------------------------------------------------------ consensus_10826#0 ----------------------------------------- consensus_10826#3 ----------------------------------------- consensus_10826#2 CGTGTGGGGGAGAAACTGNTNCTATGATCTATATTAAATAN 885 consensus_10826#1 ----------------------------------------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||