cluster # 10827

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Schistosoma mansoni
cluster # 10827 cluster # 10827 Sequences # 22 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10827#0 length = 1408 sequences # 18
consensus_10827#1 length = 348 sequences # 1

consensus_10827#2 length = 334 sequences # 1
consensus_10827#3 length = 290 sequences # 1
consensus_10827#4 length = 241 sequences # 1

consensusID : consensus_10827#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 18
consensus length = 1408
fasta sequence

                              [GCTCTGTCTGACAGTGTTGGCAACTGCAAATGGAGAATCCTTTTGCAGATCCTGTAGCGAGGTTGACACCGACCAATTCTCATGATAACCCCCAGATTTCTCGTGTTGATACGGGTGCATTAGATAAGTACAATCCTTTCGAGGCTACTGCCCATGGGGATACCAAACAGGGTAATCATACCACTAATTCTGTACCACCACCTCCATATTCTGCTACTCAAGCTCAGAAAATTACAACCGCAGAGCTTGAGCGTCGTCAGAAGGAACTGGATGCAAAGGCTGCAGAACTAGCACGAAGAGAAGAAGAACAACGAATGAGAGAGGAACAAAATCGGCCAGTATCCCAAGGAGGTGTTATAGCCAAGAACTGGCCTCCATTACCATCCTTCTGTCCTTGTACTCCTTGCTTTTACCAAAACATTGAGACAGAAATTGTACCTGAGTACAAAAGAGT-GGTCAAGTTTGGATATTACCTATGGCTGTCGTATGCTTGTTTGTTGTTAGTGAACTTGTTCACAGCAATGATATATTTTGCCGGTACTTCTAGCTACTACGGGGGAAGTCTGTTCGGTGTTGCTATTCT-GGTGTTCATAATTTGTGTACCGTCATCGTACGTGTGTTGGTTCAGACCATTATACAAAGCCTTTAGAAGCAACAGCTCAATCAATTTCTTCGTATTTTTCATTGTTTTTGGTGTTCAAGTTTTGGTTATGATCATACAGTCAATCGGCATCATAAATTGGGGATCCTGTGGATGGATCACTGGTTTGGCGGTGGTCAAATCTAACCCGGTAATTGGAGTTATGTCATTGCTGGTAGCATCAATATTCACAGCCATCACAGGACTATCGGCTTGGTATCTTATCCATGTACATCGCATCTATCGCAGTACGGGCGCTAGTTTTGGAAAGGCTAAAGAAGAATTCGCTAATGGTGTAGTGTCAGATCCGTTTATAAGAAGCAGTGCACTGGAAGCCGGATTGTTTGCAACACGTCAGGCTACTTCAAGTGGTCCATCAGCTAACAGATCCTAAATAATACATAACTTTAATTCCCTAGTGAAAGTGTGTCTTTATGTTTAATTCCCGATTGTTTTCTCATAATACTTTACACAGCATCATTGCCCTAACTTATTCTCTTGTATTTTTACTGTGACAGTTTGTTGGTTGGTGTTGTGTTTATAGTATTCATGTTTTTCTAGGCCTGAAACTACATATTCAAAAACACTCATTCTCTTCAAACTGCAGAATCCTCTATGATATATATATTTCTTCACCTCTTCATGTCATCCAGTAAAAGTTGTCTTGACTTGTGATCATATTTTTGATTTATTTTAATTTTTTCACTTAGTGTTCTTGTAATATGATGCTTGCAATTCCCACAACACTCTGAGGGACTTGCTATTATT]

[+] EMBL BF936482             [GCTCTGTCTGACAGTGTTGGCAACTGCAAATGGAGAATCCTTTTGCAGATCCTGTAGCGAGGTTGACACCGACCAATTCTCATGATAACCCCCAGATTTCTCGTGTTGATACGGGTGCATTAGATAAGTACAATCCTTTCGAGGCTACTGCCCATGGGGATACCAAACAGGGTAATCATACCACTAATTCTGTACCACCACCTCCATATTCTGCTACTCAAGCTCAGAAAATTACAACCGCAGAGCTTGAGCGTCGTCAGAAGGAACTGGATGCAAAGGCTGCAGAACTAGCACGAAGAGAAGAAGAACAACGAATGAGAGAGGAACAAAATCGGCCAGTATCCCAAGGAGGTGTTATAGCCAAGAACTGGCCTCCATTACCATCCTTCTGTCCTTGTACTCCTTGCTTTTACCAAAACATTGAGACAGAAATTGTACCTGAGTACAAAAGAGT GGTCAAGTTTGGATATTACCTATGGCTGTCGTATGCTTGTTTGTTGTTAGTGAACTTGTTCACAGCAATGATATATTTTGCCGGTACTTCTAGCTACTACGGGGGAAGTCTGTTCGGTGTTGCTATTCTGGGTG TCATAATTTGTGTACCGTCATCGTACGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD071282             [                                      CCTTTTGCAGATCCTGTAGCGAGGTTGACACCGACCAATTCTCATGATAACCCCCAGATTTCTCGTGTTGATACGGGTGCATTAGATAAGTACAATCCTTTCGAGGCTACTGCCCATGGGGATACCAAACAGGGTAATCATACCACTAATTCTGTACCACCACCTCCATATTCTGCTACTCAAGCTCAGAAAATTACAACCGCAGAGCTTGAGCGTCGTCAGAAGGAACTGGATGCAAAGGCTGCAGAACTAGCACGAAGAGAAGAAGAACAACGAATGAGAGAGGAACAAAATCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD128790             [                                                                                                   CTCGTGTTGATACGGGTGCATTAGATAAGTACAATNTTTTCGAGGCTACTGCCCATGGGGATACCAAACAGGGTAATCATACCACTATTTCTGTACCACCACCTCCATATTCTGCTACTCAAGCTCAGAAAATTACAACCGCAGAGCTTGAGCGTCGTCAGAAGGAACTGGATGCAAAGGCTGCAGAACTAGCACGAAGAGAAGAAGAACAACGAATGAGAGAGGAACAAAATCGGCCAGTATCCCAAGGAGGTGTTATAGCCAAGAACTGGCCTCCATTACCATCCTTCTGTCCTTGTACTCCTTGCTTTTACCAAAACATTGAGACAGAAATTGTACCTGAGTACAAAAGAGT GGTCAAGTTTGGATATTACCTATGGCTGTCGTATGCTTGTTTGTTGTTAGTGACATTGTTCACAGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD068440             [                                                                                                                                                         ATGGGGAT CCAAACA GGTAATCATACCACTAATTCTGTACCACCACCTCCATATTCTGCTACTCAAGCTCAGAAAATTACAACCGCAGAGCTTGAGCGTCGTCAGAAGGAACTGGATGCAAAGGCTGCAGAACTAGCACGAAGAGAAGAAGAACAACGAATGAGAGAGGAACAAAATCGGCCAGTATCCCAAGGAGGTGTTATAGCCAAGAACTGGCCTCCATTACCATCCTTCTGTCCTTGTACTCCTTGCTTTTACCAAAACATTGAGACAGAAATTGTACCTGAGTACAAAAGAGT GGTCAAGTTTGGATATTACCTATGGCTGTCGTATGCTTGTTTGTTGTTAGTGAACTTGTTCACAGCAATGATATATTTTGCCGGTACTTCTAGCTACTACGGGGGAAGTCTGTTCGGTGTTGCTATTCT GGTGTTCATAATTTGTGTACCGTCATCGTACGTGTGTTGGTTCAGACCATTATACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD153503             [                                                                                                                                                                                                                                                                                                                        GAATGAGAGAGGAACAAAATCGGCCAGTATCCCAAGGAGGTGTTATAGCCAAGAACTGGCCTCCATTACCATCCTTCTGTCCTTGTACTCCTTGCTTTTACCAAAACATTGAGACAGAAATTGTACCTGAGTACAAAAGAGT GGTCAAGTTTGGATATTACCTATGGCTGTCGTATGCTTGTTTGTTGTTAGTGAACTTGTTCACAGCAATGATATATTTTGCCGGTACTTCTAGCTACTACGGGGGAAGTCTGTTCGGTGTTGCTATTCT GGTGTTCATAATTTGTGTACCGTCATCGTACGTGTGTTGGTTCAGACCATTATACAAAGCCTTTAGAAGCAACAGCTCAATCAATTTCTTCGTATTTTTCATTGTTTTTGGTGTTCAAGTTTTGGTTATGATCATACAGTCAATCGGCATCATAAATTGGGGATCCTGTGGATGGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD153555             [                                                                                                                                                                                                                                                                                                                        GAATGAGAGAGGAACAAAATCGGCCAGTATCCCAAGGAGGTGTTATAGCCAAGAACTGGCCTCCATTACCATCCTTCTGTCCTTGTACTCCTTGCTTTTACCAAAACATTGAGACAGAAATTGTACCTGAGTACAAAAGAGT GGTCAAGTTTGGATATTACCTATGGCTGTCGTATGCTTGTTTGTTGTTAGTGAACTTGTTCACAGCAATGATATATTTTGCCGGTACTTCTAGCTACTACGGGGGAAGTCTGTTCGGTGTTGCTATTCT GGTGTTCATAATTTGTGTACCGTCATCGTACGTGTGTTGCTTCAGACCATTATACAAAGCCTTTAGAAGCAACAGCTCAATCAATTTCTTCGTATTTTTCATTGTTTAAGGTGTTCAAGTTTTGGTTATGATCATACAGTCAATCGGCATCATAAATTGGGGATCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD153570             [                                                                                                                                                                                                                                                                                                                        GAATGAGAGAGGAACAAAATCGGCCAGTATCCCAAGGAGGTGTTATAGCCAAGAACTGGCCTCCATTACCATCCTTCTGTCCTTGTACTCCTTGCTTTTACCAAAACATTGAGACAGAAATTGTACCTGAGTACAAAAGAGT GGTCAAGTTTGGATATTACCTATGGCTGTCGTATGCTTGTTTGTTGTTAGTGAACTTGTTCACAGCAATGATATATTTTGCCGGTACTTCTAGCTACTACGGGGGAAGTCTGTTCGGTGTTGCTATTCT GGTGTTCATAATTTGTGTACCGTCATCGTACGTGTGTTGGTTCAGACCATTATACAAAGCCTTTAGAAGCAACAGCTCAATCAATTTCTTCGTATTTTTCATTGTTTTTGGTGTTCAAGTATTGGTTATGATCATACAGTCAATCGGCATCATAAATTGGGGATCCTGTGGATGGATCACTGGTTTGGCGGTGGTCAAATCTAACCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD063069             [                                                                                                                                                                                                                                                                                                                                        AAATCGGCCAGTATCCCAAGGAGGTGTTATAGCCAAGAACTGGCCTCCATTACCATCCTTCTGTCCTTGTACTCCTTGCTTTTACCAAAACATTGAGACAGAAATTGTACCTGAGTACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD081118             [                                                                                                                                                                                                                                                                                                                                                                                                                                                            gaggagcAGTGGGTCAAGTTTGGATATTACCTATGGCTGTCGTATGCTTGTTTGTTGTTAGTGAACTTGTTCACAGCAATGATATATTTTGCCGGTACTTCTAGCTACTACGGGGGAAGTCTGTTCGGTGTTGCTATTCT GGTGTTCATAATTTGTGTACCGTCATCGTACGTGTGTTGGTTCAGACCATTATACAAAGCCTTTAGAAGCAACAGCTCAATCAATTTCTTCGTATTTTTCATTGTTTTTGGTGTTCAAGTTTTGGTTATGATCATACAGTCAATCGGCATCATAAATTGGGGATCCTGTGGATGGATCACTGGTTTGGCGGTGGTCAAATCTAACCCGGTAATTGGAGTTATGTCATTGCTGGTAGCATCAATATTCACAGCCATCACAGGACTATCGGCTTGGTATCTTATCCATGTACATCGCATCTATCGCAGTACGGGCGCTAGTTTTGGAAAGGCTAAAGAAGAATTCGCTAATGGTGTAGTGTCAGATCCGTTTATAAGAAGCAGTGCACTGGAAGCCGGATTGTTTGCAACACGTCAGGCTACTTCAAGTGGTCCATCAGCTAACAGATCCTAAATAATACATAACTTTAATTCCCTAGTGAAAGTGTGTCTTTATGTTTAATTCCCGATTGTTTTCTCATAATACTNTACACAGCATCATTGCCCTAACTTATTCTCTT                                                                                                                                                                                                                                                                            ]
[+] EMBL CD114018             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TAGTGAACTTGTTCACAGCAATGATATATTTTGCCGGTACTTCTAGCTACTACGGGGGAAGTCTGTTCGGTGTTGTTATTCT GGTGTTCATAATTTGTGTACCGTCATCGTACGTGTGTTGGTTCAGACCATTATACAAAGCCTTTAGAAGCAACAGCTCAATCAATTTCTTCGTATTTTACATTGTTTTTGGTGTTCAAGTTTTGGTTATGATCATACAGTCAATCGGCATCATAAATTGGGGATCCTGTGGATGGATCACTGGTTTGGCGGTGGTCAAATCTAACCCGGTAATTGGAGTTATGTCATTGCTGGTAGCATCAATATTCACAGCCATCACAGGACTATCGGCTTGGTATCTTATCCATGTACATCGCATCTATCGCAGTACGGGCGCTAG TTTGGAAAGGCTAAAGAAGAATTCGCTAATGGTGTAGTGTCAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD186661             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CGGTGTTGCTATTCT GGTGTTCATAATTTGTGTACCGTCATCGTACGTGTGTTGGTTCAGACCATTATACAAAGCCTTTAGAAGCAACAGCTCAATCAATTTCTTCGTATTTTTCATTGTTTTTGGTGTTCAAGTTTTGGTTATGATCATACAGTCAATCGGCATCATAAATTGGGGATCCTGTGGATGGATCACTGGTTTGGCGGTGGTCAAATCTAACCCGGTAATTGGAGTTATGTCATTGCTGGTAGCATCAATATTCACAGCCATCACAGGACTATCGGCTTGGTATCTTATCCATGTACATCGCATCTATCGCAGTACGGGCGCTAGTTTTGGAAAGGCTt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD060768             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GGGGATCCTGTGGATGGATCACTGGTTTGGCGGTGTTCAAATCTAACCCGGTAATTGGAGTTATGTCGGTGGTGGTAGCATCAATATTCACAGCCATCACAGGACTATCGGCTTGGTATCTTATCCATGTACATCGCATCTATCGCAGTACGGGCGCTAGTTTTGGAAAGGCTAAAGAAGAATTCGCTAATGGTGTAGTGTCAGATCCGTTTATAAGAAGCAGTGCACTGGAAGCCGGATTGTTTGCAACACGTCAGGCTACTTCAAGTGGTCCATCAGCTAACAGATCCTAAATAATACATAACTTTAATTCCCTAGTGAAAGTGTGTCTTTATGTTTAA                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD062547             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GGGGA  CTGTGGATGGATCACTGGTTTGGCGGTGGTCAAATCTAACCCGGTAATTGGAGTTATGTCATTGCTGGTAGCATCAATATTCACAGCCATCACAGGACTATCGGCTTGGTATCTTATCCATGTACATCGCATCTATCGCAGTACGGGCGCTAGTTTTGGAAAGGCTAAAGAAGAATTCGCTAATGGTGTAGTGTCAGATCCGTTTATAAGAAGCAGTGCACTGGAAGCCGGATTGTTTGCAACACGTCAGGCTACTTCAAGTGGTCCATCAGCTAACAGATCCTAAATAATACATAACTTTAATTCCCTAGTGAAAGTGTGT                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD061968             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GGGATCCTGTGGATGGATCACTGGTTTGGCGGTGGTCAAATCTAACCCGGTAATTGGAGTTATGTCATTGCTAGTAGCATCAATATTCACAGCCATCACAGGACTATCGGCTTGGTATCTTATCCATGTACATCGCATCTATCGCAGTACGGGCGCTAGTTTTGGAAAGGCTAAAGAAGAATTCGCTAATGGTGTAGTGTCAGATCCGTTTATAAGAAGCAGTGCACTGGAAGCCGGATTGTTTGCAACACGTCAGGCTACTTCAAGTGGTCCATCAGCTAACAGATCCTAAATAATACATAACTTTAATTCCCTAGTGAAAGTcgtc                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD074940             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AATCTAACCCGGTAATTGGAGTTATGTCATTGCTGGTAGCATCAATATTCACAGCCATCACAGGACTATCGGCTTGGTATCTTATCCATGTACATCGCATCTATCGCAGTACGGGCGCTAGTTTTGGAAAGGCTAAAGAAGAATTCGCTAATGGTGTAGTGTCAGATCCGTTTATAAGAAGCAGTGCACTGGAAGCCGGATTGTTTGCAACACGTCAGGCTACTTCAAGTGGTCCATCAGCTAACAGATCCTAAATAATACATAACTTTAATTCCCTAGTGAAAGTGTGTCTTTATGTTTAATTCCCGATTGTTTTCTCATAATACTTTACACAGCATCATTGCCCTAACTTATTCTCTTGTATTTTTACTGTGACAGTTTGTTGGTTGGTGTTGTGTTTATAGTATTCATGTTTTTCTAGGCCTGAAACTACATATTCAAAAACACTCATTCTCTTCAAACTGCAGAATCCTCTATGATATATATATTTCTTCACCTCTTCATGTCATCCAGTAAAAGTTGTCTTGACTTGTGATCATATTTTTGATTTATTTTAATTTTTTCACTTAGTGTTCTTGTAATATGATGCTTGCAATTCCCACAACACTCTGAGGGACTTGCTATTATT]
[-] EMBL CD179744             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CCATGTACATCGCATCTATCGCAGTACGGGCGCTAGTTTTGCAAAGGCTAAAGAAGAATTCGCTAATGGTGTAGTGTCAGATCCGTTTATAAGAAGCAGTGCACTGGAAGCCGGATTGTTTGCAACACGTCAGGCTACTTCAAGTGGTCCATCAGCTAACAGATCCTAAATAATACATACCTTTAATTCCTTAGTGAAAGTGTGTCTTTATGTTTAATTCCAGATTGTTTTCTCATAATACTTTACACAGCATCATTGCCCTAACTTATTCTCTTGTATTTTCACTGTGACAGTTTGTTGGTTGGTGTTGTGTTAATAGTATTCATGTTTTTCTAGGCGTGAAACTACATATTCACAAACACTCATT                                                                                                                                                                                ]
[-] EMBL CD179738             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CTAATGGTGTAGTGTCAGATCCGTTTATAAGAAGCAGTGCACTGGAAGCCGGATTGTTTGCAACACGTCAGGATACTTCAAGTGGTCCATCAGCTAACAGATCATAAATAATACATAACTTTAATTCCCTAGTGAAAGTGTGTCTTTATGCATAATTCCCGATTGTTTTCTCATAATACTTCACACAGCATCATTGCCCTAACTAATTCTC                                                                                                                                                                                                                                                                              ]
[+] EMBL CD135531             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CAGGCTACTTCAAGTGGTCCATCAGCTAACAGATCCTAAATAATACATAACTTTAATTCCCTAGTGAAAGTGTGTCTTTATGTTTAATTCCCGCATGTTTTCTCATAATACTTTACACAGCATCATTGCCCTAACTTATTCTCTTGTATTTTTACTGTGACAGTTTGTTGGTTGGTGTTGTGTTTATAGTATTCATGTTTTTCTAGGCCTGAAACTACATATTCAAAAACACTCATTCTCTTCAAACTGCAGAATCCTCTATGATATATATATTTCT                                                                                                                                        ]




>consensus_10827#0
GCTCTGTCTGACAGTGTTGGCAACTGCAAATGGAGAATCCTTTTGCAGATCCTGTAGCGA
GGTTGACACCGACCAATTCTCATGATAACCCCCAGATTTCTCGTGTTGATACGGGTGCAT
TAGATAAGTACAATCCTTTCGAGGCTACTGCCCATGGGGATACCAAACAGGGTAATCATA
CCACTAATTCTGTACCACCACCTCCATATTCTGCTACTCAAGCTCAGAAAATTACAACCG
CAGAGCTTGAGCGTCGTCAGAAGGAACTGGATGCAAAGGCTGCAGAACTAGCACGAAGAG
AAGAAGAACAACGAATGAGAGAGGAACAAAATCGGCCAGTATCCCAAGGAGGTGTTATAG
CCAAGAACTGGCCTCCATTACCATCCTTCTGTCCTTGTACTCCTTGCTTTTACCAAAACA
TTGAGACAGAAATTGTACCTGAGTACAAAAGAGTGGTCAAGTTTGGATATTACCTATGGC
TGTCGTATGCTTGTTTGTTGTTAGTGAACTTGTTCACAGCAATGATATATTTTGCCGGTA
CTTCTAGCTACTACGGGGGAAGTCTGTTCGGTGTTGCTATTCTGGTGTTCATAATTTGTG
TACCGTCATCGTACGTGTGTTGGTTCAGACCATTATACAAAGCCTTTAGAAGCAACAGCT
CAATCAATTTCTTCGTATTTTTCATTGTTTTTGGTGTTCAAGTTTTGGTTATGATCATAC
AGTCAATCGGCATCATAAATTGGGGATCCTGTGGATGGATCACTGGTTTGGCGGTGGTCA
AATCTAACCCGGTAATTGGAGTTATGTCATTGCTGGTAGCATCAATATTCACAGCCATCA
CAGGACTATCGGCTTGGTATCTTATCCATGTACATCGCATCTATCGCAGTACGGGCGCTA
GTTTTGGAAAGGCTAAAGAAGAATTCGCTAATGGTGTAGTGTCAGATCCGTTTATAAGAA
GCAGTGCACTGGAAGCCGGATTGTTTGCAACACGTCAGGCTACTTCAAGTGGTCCATCAG
CTAACAGATCCTAAATAATACATAACTTTAATTCCCTAGTGAAAGTGTGTCTTTATGTTT
AATTCCCGATTGTTTTCTCATAATACTTTACACAGCATCATTGCCCTAACTTATTCTCTT
GTATTTTTACTGTGACAGTTTGTTGGTTGGTGTTGTGTTTATAGTATTCATGTTTTTCTA
GGCCTGAAACTACATATTCAAAAACACTCATTCTCTTCAAACTGCAGAATCCTCTATGAT
ATATATATTTCTTCACCTCTTCATGTCATCCAGTAAAAGTTGTCTTGACTTGTGATCATA
TTTTTGATTTATTTTAATTTTTTCACTTAGTGTTCTTGTAATATGATGCTTGCAATTCCC
ACAACACTCTGAGGGACTTGCTATTATT

consensusID : consensus_10827#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 348
fasta sequence

                              [GTCATATTCACGATTTGACAGCTACCTTGAAAGGTACAACTGTCTTTTCGAAAATCGACTTGGTTAAAGCTTATAGCCAAATCCCGATGGCACCTGACGACATTCCTAAAACCGGCATCATCACTCCCTTCGGTCTTTACGAATTTCTACGAATGCCTTTTGGTTTAAGAAATGCGGCTCAAACCTTCCAAAGGTTTATAGACGACGTCTTCCGAGGTCTCAACTTCGTACATGCGTATGTTGATGACTGTCTAATAGCAAGTCCGGACAGAGAATCACATCTCAAGCATCTGGACATTGTATTCGATCGACTCCAAAGGCATGGGATTACTGTCAACATTCAGAAAT]

[+] EMBL BG931518             [GTCATATTCACGATTTGACAGCTACCTTGAAAGGTACAACTGTCTTTTCGAAAATCGACTTGGTTAAAGCTTATAGCCAAATCCCGATGGCACCTGACGACATTCCTAAAACCGGCATCATCACTCCCTTCGGTCTTTACGAATTTCTACGAATGCCTTTTGGTTTAAGAAATGCGGCTCAAACCTTCCAAAGGTTTATAGACGACGTCTTCCGAGGTCTCAACTTCGTACATGCGTATGTTGATGACTGTCTAATAGCAAGTCCGGACAGAGAATCACATCTCAAGCATCTGGACATTGTATTCGATCGACTCCAAAGGCATGGGATTACTGTCAACATTCAGAAAT]




>consensus_10827#1
GTCATATTCACGATTTGACAGCTACCTTGAAAGGTACAACTGTCTTTTCGAAAATCGACT
TGGTTAAAGCTTATAGCCAAATCCCGATGGCACCTGACGACATTCCTAAAACCGGCATCA
TCACTCCCTTCGGTCTTTACGAATTTCTACGAATGCCTTTTGGTTTAAGAAATGCGGCTC
AAACCTTCCAAAGGTTTATAGACGACGTCTTCCGAGGTCTCAACTTCGTACATGCGTATG
TTGATGACTGTCTAATAGCAAGTCCGGACAGAGAATCACATCTCAAGCATCTGGACATTG
TATTCGATCGACTCCAAAGGCATGGGATTACTGTCAACATTCAGAAAT

consensusID : consensus_10827#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 334
fasta sequence

                              [ATCTGAAACCCAGCGCTGTGCCCGGCGGTCTGCAATCTATAAATACTGCATGCCCGGGCAGTACGAATTCGACCATATGATAGACTTAGGAATAATTCGACCATCAAGTAATCCATACTCATCTCCATTGCACATTGTCCCTAAAAAAGACAGCAATGATTGGCGTTCAACTGGTGATTATCGGCGTCTGAATGCTAATACCATTTCCGATCGTTACCCGTTGCCTCACATTCACGATTTGACTGCTGCCTTGAAAGGAAAAACTGTCTTTTCGAGAATCGACTTGGTTAGGGCTTACAACCGAATACCTATGGCAAACGACGACATTCCGAGA]

[+] EMBL BG931482             [ATCTGAAACCCAGCGCTGTGCCCGGCGGTCTGCAATCTATAAATACTGCATGCCCGGGCAGTACGAATTCGACCATATGATAGACTTAGGAATAATTCGACCATCAAGTAATCCATACTCATCTCCATTGCACATTGTCCCTAAAAAAGACAGCAATGATTGGCGTTCAACTGGTGATTATCGGCGTCTGAATGCTAATACCATTTCCGATCGTTACCCGTTGCCTCACATTCACGATTTGACTGCTGCCTTGAAAGGAAAAACTGTCTTTTCGAGAATCGACTTGGTTAGGGCTTACAACCGAATACCTATGGCAAACGACGACATTCCGAGA]




>consensus_10827#2
ATCTGAAACCCAGCGCTGTGCCCGGCGGTCTGCAATCTATAAATACTGCATGCCCGGGCA
GTACGAATTCGACCATATGATAGACTTAGGAATAATTCGACCATCAAGTAATCCATACTC
ATCTCCATTGCACATTGTCCCTAAAAAAGACAGCAATGATTGGCGTTCAACTGGTGATTA
TCGGCGTCTGAATGCTAATACCATTTCCGATCGTTACCCGTTGCCTCACATTCACGATTT
GACTGCTGCCTTGAAAGGAAAAACTGTCTTTTCGAGAATCGACTTGGTTAGGGCTTACAA
CCGAATACCTATGGCAAACGACGACATTCCGAGA

consensusID : consensus_10827#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 290
fasta sequence

                              [GGCGTGAGCTAGGTGAAGCAACCACAACAGCAGAGCTTGAGCGTCGTCAGAAGGAACTGGATGCAAAGGCTGCAGAACTAGCACGAAGAGAAGAAGAACAACGAATGAGAGAGGAACAAAATCGGCCAGTATCCCAAGGAGGTTTGTCATTTTTCTCACCTAAATTGCCCCGTGCGCAACCCAAGCAACCTGGTGCCCATGGGCACCCTATTACACATGGTCCCTAAAAAGGACAGCAATGATTGGCGGCCAACTGGTGATTATCGGCGTCTGAATGCTAAAACCATTCC]

[-] EMBL SMRAP001             [GGCGTGAGCTAGGTGAAGCAACCACAACAGCAGAGCTTGAGCGTCGTCAGAAGGAACTGGATGCAAAGGCTGCAGAACTAGCACGAAGAGAAGAAGAACAACGAATGAGAGAGGAACAAAATCGGCCAGTATCCCAAGGAGGTTTGTCATTTTTCTCACCTAAATTGCCCCGTGCGCAACCCAAGCAACCTGGTGCCCATGGGCACCCTATTACACATGGTCCCTAAAAAGGACAGCAATGATTGGCGGCCAACTGGTGATTATCGGCGTCTGAATGCTAAAACCATTCC]




>consensus_10827#3
GGCGTGAGCTAGGTGAAGCAACCACAACAGCAGAGCTTGAGCGTCGTCAGAAGGAACTGG
ATGCAAAGGCTGCAGAACTAGCACGAAGAGAAGAAGAACAACGAATGAGAGAGGAACAAA
ATCGGCCAGTATCCCAAGGAGGTTTGTCATTTTTCTCACCTAAATTGCCCCGTGCGCAAC
CCAAGCAACCTGGTGCCCATGGGCACCCTATTACACATGGTCCCTAAAAAGGACAGCAAT
GATTGGCGGCCAACTGGTGATTATCGGCGTCTGAATGCTAAAACCATTCC

consensusID : consensus_10827#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 241
fasta sequence

                              [ATCATCGGTATTTGGTTGTAAGCCTTAACTAAGTCTATTTTCGAAAAGACAGTTGTACCTTTCAAGGTAGCTGTCAAATTGTGAATGTGAGGCAACGGGTAACGATCGGGAATGGTTTTAGCATTCAGACGCCGATAATCACCAGTTGGCCGCCAATCATTGCTGTCCTTTTTAGAGACCATGTGCAATGGAGATGACCACGGACTATTTGATGGTCAAATTATCCCCTAAGTCTTATCAT]

[+] EMBL BG931114             [ATCATCGGTATTTGGTTGTAAGCCTTAACTAAGTCTATTTTCGAAAAGACAGTTGTACCTTTCAAGGTAGCTGTCAAATTGTGAATGTGAGGCAACGGGTAACGATCGGGAATGGTTTTAGCATTCAGACGCCGATAATCACCAGTTGGCCGCCAATCATTGCTGTCCTTTTTAGAGACCATGTGCAATGGAGATGACCACGGACTATTTGATGGTCAAATTATCCCCTAAGTCTTATCAT]




>consensus_10827#4
ATCATCGGTATTTGGTTGTAAGCCTTAACTAAGTCTATTTTCGAAAAGACAGTTGTACCT
TTCAAGGTAGCTGTCAAATTGTGAATGTGAGGCAACGGGTAACGATCGGGAATGGTTTTA
GCATTCAGACGCCGATAATCACCAGTTGGCCGCCAATCATTGCTGTCCTTTTTAGAGACC
ATGTGCAATGGAGATGACCACGGACTATTTGATGGTCAAATTATCCCCTAAGTCTTATCA
T

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10827#0      GCTCTGTCTGACAGTGTTGGCAACTGCAAATGGAGAATCCTTTTGCAGATCCTGTAGCGA 60
consensus_10827#3      ------------------------------------------------------------
consensus_10827#2      ------------------------------------------------------------
consensus_10827#1      ------------------------------------------------------------
consensus_10827#4      ------------------------------------------------------------
                                                                                   

consensus_10827#0      GGTTGACACCGACCAATTCTCATGATAACCCCCAGATTTCTCGTGTTGATACGGGTGCAT 120
consensus_10827#3      ------------------------------------------------------------
consensus_10827#2      ------------------------------------------------------------
consensus_10827#1      ------------------------------------------------------------
consensus_10827#4      ------------------------------------------------------------
                                                                                   

consensus_10827#0      TAGATAAGTACAATCCTTTCGAGGCTACTGCCCATGGGGATACCAAACAGGGTAATCATA 180
consensus_10827#3      ------------------------------------------------------------
consensus_10827#2      ------------------------------------------------------------
consensus_10827#1      ------------------------------------------------------------
consensus_10827#4      ------------------------------------------------------------
                                                                                   

consensus_10827#0      CCACTAATTCTGTACCACCACCTCCATATTCTGC-TACTCAAGCTCAGAAA-ATTACAAC 238
consensus_10827#3      -------------------------------GGCGTGAGCTAGGTGAAGCA-ACCACAAC 28
consensus_10827#2      -ATCTGAAACCCAGCGCTGTGCCCGGCGGTCTGCAATCTATAAATACTGCATGCCCGGGC 59
consensus_10827#1      --------GTCATATTCACGATTTGACAGCTACC--TTGAAAGGTACAACTGTCTTTTCG 50
consensus_10827#4      ----------------------------------------------------------AT 2
                                                                                   

consensus_10827#0      CGCA-GAGCTTGAGCGT-CGTCAGA---AGGAACTGGATGCAAAGGCTGCAGAACTAGCA 293
consensus_10827#3      AGCA-GAGCTTGAGCGT-CGTCAGA---AGGAACTGGATGCAAAGGCTGCAGAACTAGCA 83
consensus_10827#2      AGTACGAATTCGACCATATGATAGACTTAGGAAT--AATTCGACCATCAAGTAATCCATA 117
consensus_10827#1      AAAATCGACTTGGTTAAAGCTTATAGCCAAATCCCGATGGCACCTGACGACATTCCTAAA 110
consensus_10827#4      CATCGGTATTTGGTTGTAAGCCTTAACTAAGTCT-ATTTTCGAA----AAGACAGTTGTA 57
                                * *            *   *           *                  *

consensus_10827#0      CGAAGAGAAGAAGAACAACGAATGAGAGAGGAACAAAATCGGCCAGTATCCCAAGGAGGT 353
consensus_10827#3      CGAAGAGAAGAAGAACAACGAATGAGAGAGGAACAAAATCGGCCAGTATCCCAAGGAGGT 143
consensus_10827#2      CTCATCTCCATTGCACATTGTCCCTAAAAAAGACAGCAATGATTGGCGTTCAACTGGTGA 177
consensus_10827#1      ACCGGCATCATCACTCCCTTCGGTCTTTACGAATTTCTACGAATGCCTTTTGGTTTAAGA 170
consensus_10827#4      CCTTTCAAGGTAGC-TGTCAAATTGTGAATGTGAGGCAACGGGTAACGATCGGGAATGGT 116
                                                   *           *                 * 

consensus_10827#0      GTTATAGCCAAGAA---CTGGCCTCCATTACCATCCTTCTGTCCTTGTACTCCTTGCTTT 410
consensus_10827#3      TTGTCATTTTT------CTCACCTAAATTGCCCCGTGCGCAACCCAAGCAACCTGGTGCC 197
consensus_10827#2      TTATCGGCGT-------CTGAATGCTAATACCA--TTTCCGATC--GTTACCCGTTGCCT 226
consensus_10827#1      AATGCGGCTCAAACCTTCCAAAGGTTTATAGACGACGTCTTCCGAGGTCTCAACTTCGTA 230
consensus_10827#4      TTTAGCATTCAGACG--CCGATAATCACCAGTTGGCCGCCAATC--ATTGCTGTCCTTTT 172
                                        *                                          

consensus_10827#0      TACCAAAACATT-GAGACAGAAATTGTACCTGAGTACAAAAGAGTGGTCA--AGTTTGGA 467
consensus_10827#3      CATGGGCACCCT-ATTACAC--ATGGTCCCTAA-----AAAGGACAGCAA--TGATTGGC 247
consensus_10827#2      CACATTCACGAT-TTGACTG---CTGCCTTGAAA---GGAAAAACTGTCT--TTTCGAGA 277
consensus_10827#1      CATGCGTATGTTGATGACTGT--CTAATAGCAAGTCCGGACAGAGAATCACATCTCAAGC 288
consensus_10827#4      TAGAGACCATGT-GCAATGGAGATGACCACGGACT---ATTTGATGGTCA---AATTATC 225
                        *         *    *               *                           

consensus_10827#0      TAT--TACCTA-TGGCTGTCGTATGCTTGTTTGTTGTTAGTGAACTTGTTCACAGCAATG 524
consensus_10827#3      GGC--CAACTGGTGATTATCG-GCGTCTGAATGCTAAAACCATTCC-------------- 290
consensus_10827#2      ATC--GACTTGGTTAGGGCTT-ACAACCGAATACCTATGGCAAACGACGACATTCCGAGA 334
consensus_10827#1      ATCTGGACATTGTATTCGATCGAC-TCCAAAGGCATGGGATTACTGTCAACATTCAGAAA 347
consensus_10827#4      CCCTAAGTCTTATCAT-------------------------------------------- 241
                                *  *                                               

consensus_10827#0      ATATATTTTGCCGGTACTTCTAGCTACTACGGGGGAAGTCTGTTCGGTGTTGCTATTCTG 584
consensus_10827#3      ------------------------------------------------------------
consensus_10827#2      ------------------------------------------------------------
consensus_10827#1      T----------------------------------------------------------- 348
consensus_10827#4      ------------------------------------------------------------
                                                                                   

consensus_10827#0      GTGTTCATAATTTGTGTACCGTCATCGTACGTGTGTTGGTTCAGACCATTATACAAAGCC 644
consensus_10827#3      ------------------------------------------------------------
consensus_10827#2      ------------------------------------------------------------
consensus_10827#1      ------------------------------------------------------------
consensus_10827#4      ------------------------------------------------------------
                                                                                   

consensus_10827#0      TTTAGAAGCAACAGCTCAATCAATTTCTTCGTATTTTTCATTGTTTTTGGTGTTCAAGTT 704
consensus_10827#3      ------------------------------------------------------------
consensus_10827#2      ------------------------------------------------------------
consensus_10827#1      ------------------------------------------------------------
consensus_10827#4      ------------------------------------------------------------
                                                                                   

consensus_10827#0      TTGGTTATGATCATACAGTCAATCGGCATCATAAATTGGGGATCCTGTGGATGGATCACT 764
consensus_10827#3      ------------------------------------------------------------
consensus_10827#2      ------------------------------------------------------------
consensus_10827#1      ------------------------------------------------------------
consensus_10827#4      ------------------------------------------------------------
                                                                                   

consensus_10827#0      GGTTTGGCGGTGGTCAAATCTAACCCGGTAATTGGAGTTATGTCATTGCTGGTAGCATCA 824
consensus_10827#3      ------------------------------------------------------------
consensus_10827#2      ------------------------------------------------------------
consensus_10827#1      ------------------------------------------------------------
consensus_10827#4      ------------------------------------------------------------
                                                                                   

consensus_10827#0      ATATTCACAGCCATCACAGGACTATCGGCTTGGTATCTTATCCATGTACATCGCATCTAT 884
consensus_10827#3      ------------------------------------------------------------
consensus_10827#2      ------------------------------------------------------------
consensus_10827#1      ------------------------------------------------------------
consensus_10827#4      ------------------------------------------------------------
                                                                                   

consensus_10827#0      CGCAGTACGGGCGCTAGTTTTGGAAAGGCTAAAGAAGAATTCGCTAATGGTGTAGTGTCA 944
consensus_10827#3      ------------------------------------------------------------
consensus_10827#2      ------------------------------------------------------------
consensus_10827#1      ------------------------------------------------------------
consensus_10827#4      ------------------------------------------------------------
                                                                                   

consensus_10827#0      GATCCGTTTATAAGAAGCAGTGCACTGGAAGCCGGATTGTTTGCAACACGTCAGGCTACT 1004
consensus_10827#3      ------------------------------------------------------------
consensus_10827#2      ------------------------------------------------------------
consensus_10827#1      ------------------------------------------------------------
consensus_10827#4      ------------------------------------------------------------
                                                                                   

consensus_10827#0      TCAAGTGGTCCATCAGCTAACAGATCCTAAATAATACATAACTTTAATTCCCTAGTGAAA 1064
consensus_10827#3      ------------------------------------------------------------
consensus_10827#2      ------------------------------------------------------------
consensus_10827#1      ------------------------------------------------------------
consensus_10827#4      ------------------------------------------------------------
                                                                                   

consensus_10827#0      GTGTGTCTTTATGTTTAATTCCCGATTGTTTTCTCATAATACTTTACACAGCATCATTGC 1124
consensus_10827#3      ------------------------------------------------------------
consensus_10827#2      ------------------------------------------------------------
consensus_10827#1      ------------------------------------------------------------
consensus_10827#4      ------------------------------------------------------------
                                                                                   

consensus_10827#0      CCTAACTTATTCTCTTGTATTTTTACTGTGACAGTTTGTTGGTTGGTGTTGTGTTTATAG 1184
consensus_10827#3      ------------------------------------------------------------
consensus_10827#2      ------------------------------------------------------------
consensus_10827#1      ------------------------------------------------------------
consensus_10827#4      ------------------------------------------------------------
                                                                                   

consensus_10827#0      TATTCATGTTTTTCTAGGCCTGAAACTACATATTCAAAAACACTCATTCTCTTCAAACTG 1244
consensus_10827#3      ------------------------------------------------------------
consensus_10827#2      ------------------------------------------------------------
consensus_10827#1      ------------------------------------------------------------
consensus_10827#4      ------------------------------------------------------------
                                                                                   

consensus_10827#0      CAGAATCCTCTATGATATATATATTTCTTCACCTCTTCATGTCATCCAGTAAAAGTTGTC 1304
consensus_10827#3      ------------------------------------------------------------
consensus_10827#2      ------------------------------------------------------------
consensus_10827#1      ------------------------------------------------------------
consensus_10827#4      ------------------------------------------------------------
                                                                                   

consensus_10827#0      TTGACTTGTGATCATATTTTTGATTTATTTTAATTTTTTCACTTAGTGTTCTTGTAATAT 1364
consensus_10827#3      ------------------------------------------------------------
consensus_10827#2      ------------------------------------------------------------
consensus_10827#1      ------------------------------------------------------------
consensus_10827#4      ------------------------------------------------------------
                                                                                   

consensus_10827#0      GATGCTTGCAATTCCCACAACACTCTGAGGGACTTGCTATTATT 1408
consensus_10827#3      --------------------------------------------
consensus_10827#2      --------------------------------------------
consensus_10827#1      --------------------------------------------
consensus_10827#4      --------------------------------------------