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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10833#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 661 fasta sequence
[AGTGTATGGCAAAGTTAAGGTTAGTTAAAATGACGTACATATGAGAGGTAAGTAACAACGCTTCACAGTAAATGCAGTGTCATATATCAGACAGCGTCAACAACTTCCCACTCTTTTTCCTCGGACTTTTCACAATCTTCGACCTTATCATCTTTTTCCTTGAGTTTATTGGCCTCCTCTTTCGTTTCTCCTGACCAACAACTACACCCTGTTTGTCCGTCACGTTCACCAACTCCTCTTCTCCAGGTGTCGTCGATTCGCCCTGTGGTCCGAGAGTGGTTCGTCTTCTTCTCTTGCCCGTCTTGTCCACGTAGTCGACGTAGAGCTCGTCGTCTTGTGGTGTGGTGCTGGATGGTGCTCCGGTGTCAGGTGTCGAAGTGGGTCGTTTGCTTGAGTCGGTGACTGATGCAGTTCCGTTTTGTTTTGGTGATGTTTCGGAGGGAAGTCGACGTCGTCTTCTTCTCTTGCCCGTCTTGTCCACGTAGTCGACGTAGAGCTCGTCGTCTTGTGGTGTGGTGCTGGATGGTGCTCTGTTGAGTGTAACGTAAATAATAGTTGTGTAACGGTGGTGACTGACTGGACGAGGATGGTGCTCTGTTGAGTGTAACGTTTGTTGGTGATATTGATGGCGATAGAGTGGTGATGGGTGACGGTTGAAGTA]
[+] EMBL CD138845 [AGTGTATGGCAAAGTTAAGGTTAGTTAAAATGACGTACATATGAGAGGTAAGTAACAACGCTTCACAGTAAATGCAGTGTCATATATCAGACAGCGTCAACAACTTCCCACTCTTTTTCCTCGGACTTTTCACAATCTTCGACCTTATCATCTTTTTCCTTGAGTTTATTGGCCTCCTCTTTCGTTTCTCCTGACCAACAACTACACCCTGTTTGTCCGTCACGTTCACCAACTCCTCTTCTCCAGGTGTCGTCGATTCGCCCTGTGGTCCGAGAGTGGT ]
[-] EMBL CD132540 [ ACCCTGTTTGTCCGTCACGTTCACCAACTCCTCTTCTCCAGGTGTCGTCGATTCGCCCTGTGGTCCGAGAGTGGTTCGTCTTCTTCTCTTGCCCGTCTTGTCCACGTAGTCGACGTAGAGCTCGTCGTCTTGTGGTGTGGTGCTGGATGG ]
[-] EMBL CD146425 [ TTCTCCAGGTGTCGTCGATTCGCCCAGTGGTCCGAGAGTGGTTCGTCTTCTTCTCTTGCCCGTCTTGTCCACGTAGTCGACGTAGAGCTCGTCGTCTTGTGGTGTGGTGCTGGATGGTGCTCCGGTGTCAGGTGTCGAAGTGGGTCGTTTGCTTGAGTCGGTGACTGATGCAGTTCCGTTTTGTTTTGGTGATGTTTCGGAGGGAAGTCGACGTCGTCTTCTTCTCTTGCCCGTCTTGTCCACGTAGTCGACGTAGAGCTCGTCGTCTTGTGGTGTGGTGCTGGATGGTGCTCTGTTGAGTGTAACGTAAATAATAGTTGTGTAACGGTGGTGACTGACTGGACGAGGATGGTGCTCTGTTGAGTGTAACGTTTGT ]
[+] EMBL CD065980 [ gtTCTGTTGAGTGTAACGTAAATAATAGTTGTGTAACGGTGGTGACTGATTGGCCGAGGACGGTGTTCTGTTGAGTGTAACGTTTGTTGGTGATATTGATGGCGATAGAGTGGTGATGGGTGACGGTTGAAGTA]
consensusID : consensus_10833#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 614 fasta sequence
[CGGTTGAAGTATGCGGTGATGGTGATAATTTATAAGCGATGTGTTTGAATCAGAATAGCGTTTGTTGGTGATATTGATGGCGATAGAGTGGTGATGGGTGACGGTTGAAGTATGCGGTGATGGTGATAATTTATAAGCGATGTGTTTGAATCGGAATAGCGTAAATAATAGTTGTGTAATGGTGGTGACTGACTGGACGAGGATGGTGTTCTGTTGAGTGTAACGAGAGTTGGTGTGATTTGGTGTTTGTACCAACTGGTTGTGGCGTTAATTGTGTCGAGTGATAAAAGAGTTTGTTGGTGATATTGATGGCGATAGAGTGGTGATGGGTGACGGTTGAAGTATGCGGTGATGGTGATAATTTATAAGCGATGTGTTTGAATCGGAATAGCGTTTGTTGGTGATATTGATGGCGATAGAGTGGTGATGGGTGACGGTTGAAGTATGCGGTGATGGTGATAATTTATAAGCGATGTGTTTGAATCGGAATAGCGTAAATAATAGTTGTGTAACGGTGGTGACTGATTGGACAAGGACGGTGTTCTGTTGAGTGTTACGAGAGTTGGTGTGATTTGGTGTTTGTACGAACTGGTTGTGGCGCTAATTATGTCGAG]
[+] EMBL CD146117 [CGGTTGAAGTATGCGGTGATGGTGATAATTTATAAGCGATGTGTTTGAATCAGAATAGCGTTTGTTGGTGATATTGATGGCGATAGAGTGGTGATGGGTGACGGTTGAAGTATGCGGTGATGGTGATAATTTATAAGCGATGTGTTTGAATCGGAATAGCGTAAATAATAGTTGTGTAATGGTGGTGACTGACTGGACGAGGATGGTGCTGTGTTGAGTGTAACGAGAGTTGGTGTGATTTGGTGTTTGTACCAACTGGTTGTGGCGTTAATTGTGTCGAGTGATAAAAGAGTTTGTTGGTGATATTG ]
[+] EMBL CD134474 [ GGTGATGGTGATAATTTATAAGCGATGTGTTTGAATCGGAATAGCGTTAATTGGTTATATTGATGGCGATAGAGTGGTGATGGGTGACGGTTGAAGTATGCGGTGATGGTGATAATTTATAAGCGATGTGTTTGAATCGGAATAGCGTAAATAATAGTTGTGTAATGGTGGTGACTGACTGGACGAGGATGGTGTTCTGTTGAGTGTAACGAGAGTTGGTGTGATTTGGTGTTTGTACCAACTGGTTGTGGCGTTAATTGTGTCGAGTGATAAAA ]
[+] EMBL CD117824 [ GGTGGTGACTGATTGGACGAGGATGGTGTTCTGTTGAGTGTAACGAGAGTTGGTGTGATTTGGTGTTTGTACCAACTGGTTGTGGCGTTAATTGTGTCGAGTGATAAAAGAGTTTGTTGGTGATATTGATGGCGATATAGTGGTGATGGGTGACGGTTGAAGTATGCGGTGATGGTGATAATTTATAAGCGATGTGTTTGAATCGGAATAGCGTTTGTTGGTGATATTGATGGCGATAGAGTGGTGATGGGTGACGGTTGAAGTATGCGGTGATGGTGATA ]
[+] EMBL CD118141 [ acGGTGGCGACTGATTGGACGAGGATGGTGTTCTGTTGAGTGTAACGAGAGTTGGTGTGATTTGGTGTGTGTACCAACTGGTTGTGGCGTTAATTGTGTCGAGTGATAAAAGAGTTTGTTGGTGATATTGATGGCGATAGAGTGGTGATGGGTGACGGTTGAAGTATGCGGTGATGGTGATAATTTATAAGCGATGTGTTTGAATCGGAATAGCGTTTGTTGGTGATATTGATGGCGATATAGTGGTGAT ]
[-] EMBL CD142761 [ CTGTTGAGTGTATCGAGAGTTGGTGTGATCTGAAGTTTGTACCATCTGGTTGTGGCGTTAATTGTGTCGAGTGATAAAAGAGTTTGTTGGTGATATTGATGGCGATAGAGTGGTGATGGGTGCCGGTTGAAGTATGCGCTGATGGTGATAATTTATAAGCGATGTGTTTAAATCGGAATAGCGTTTGTTGGTGATATTGATGGCGATAGAGTGGTGATGGGTGACGGTTGAAGTATGCGGTGATGGTGATAATTTATAAGCGATGTGTTTGAATCGGAATAGCGTAAATAATAGTT ]
[+] EMBL CD155222 [ GTGTTACGAGAGTTGGTGTGATTTGGTGTTTGTACCAACTGGTTGTGGCGTTAATTGTGTCGAGTGATAAGAGAGTTTGTTGGTGATATTGATGGCGATAGAGCGGTGATGGGTGACGGTTGAAGTATGCGGTGATGGTGATAATTTATAAGCGATGTGTTTAAATCGGAATAGCGTTTGTTGGTGATATTGATGGCGATAGAGTGGTGATGGGTGACGATTGAAGTTTGCGGTGATGGTGATAATTTATAAGCGATGTGTTTGAATCGTTATAGCGTAAATAATAGTTGTGTAACGGTGGTGACTGATTGGACAAGGACGGTGTTCTGTTGAGTGTTACGAGAGTTGGTGTGATTTGGTGTTTGTACGAACTGGTTGTGGCGCTAATTATGTCGAG]
consensusID : consensus_10833#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 558 fasta sequence
[CTTGAGCTCACCAACAAACGTTATACTCAACANAACACCGTCCTCGGCCAATCAGTCACCACCATTACACAACTATTATTTACTCTTTTATCACTCGACACAATTTACGCCACAACCAGTTGGTACAAACACCAAATCACACCAACTCTCGTTACACTCAACAGAGCACCATCCTCGTCCAGTCAGTCACCACCGTTACACAACTATTATTTACGTCACACTCAACAGAGCACCATCCTCGGTGATGCAGAAAGATCTATGACGGAACCATTTTAACTGACCTGAAAGCTATGCACACTTGACACTGGACGCAGTTGTACACAAACAGTGAATGACAAAACTTTGCGGTACACTCAACAGAACACCGTCCTTGTCCAATCAGTCACCACCGTTACACAACTATTATTTACTCTTTTATCACTCGACACAATTTACGCCACAACCAGTTGGTACAAACACCAAATCACACCAAGCTCTCGATACACTCAACAGAGCACCATCCTCGTCCAGTCAGTCACCACCGTTACACAACTATTATTTACGTCACACTCAACAGAG]
[+] EMBL CD128870 [CTTGAGCTCACCAACAAACGTTATACTCAACANAACACCGTCCTCGGCCAATCAGTCACCACCATTACACAACTATTATTTACTCTTTTATCACTCGACACAATTTACGCCACAACCAGTTGGTACAAACACCAAATCACACCAACTCTCGTTACACTCAACAGAGCACCATCCTCGTCCAGTCAGTCACCACCGTTACACAACTATTATTTACGTCACACTCAACAGAGCACCATCCTCGGTGATGCAGAAAGATCTATGACGGAACCATTTTAACTGACCTGAAAGCTATGCACACTTGACACTGGACGCAGTTGTACACAAACAGTGAATGACAAAACTTTGCGGTACACTCAACAGAACACCGTCCTTGTCCAATCAGTCACCACCGTTACACAACTATTATTTACTCTTTTATCACTCGACACAATTTACGCCACAACCAGTTGGTACAAACACCAAATCACACCAAGCTCTCGATACACTCAACAGAGCACCATCCTCGTCCAGTCAGTCACCACCGTTACACAACTATTATTTACGTCACACTCAACAGAG]
consensusID : consensus_10833#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 489 fasta sequence
[ACACCAACTCTCGTAACACTCAACAGAACACCGTCCTTGTCCAATCAGTCACCACCGTTACACAACTATTATTTACTCTTTTATCACTCGACACAATTAACGCCACAACCAGTTGGTACAAACACCAAATCACACCAACTCTCGTTACACTCAACAGAACACCATCCTCGTCCAATCAGTCACCACCGTTACACAACTATTATTTACGTTACACTCAACAGAACACCATCCTCGTCCAATCAGTCACCACCGTTACACAACTATTATTTACGTTACACTCAACAGAACACCATCCTCGTCCAATCAGTCACCACCGTTACACAACTATTATTTACGCTATTCCGATT-TAACACATCGCTTAT-AATTATCACCATC-CCGCATACTTCAA-CGTCA-CCATCA-CACTCTATCGTCATCAATATCACCAACAAACTCTTTTATCACTCGACACAATTAACGCCACAACCAGTTGGTACAAACACCAAATCACAC]
[+] EMBL CD143116 [ACACCAACTCTCGTAACACTCAACAGAACACCGTCCTTGTCCAATCAGTCACCACCGTTACACAACTATTATTTACTCTTTTATCACTCGACACAATTAACGCCACAACCAGTTGGTACAAACACCAAATCACACCAACTCTCGTTACACTCAACAGAACACCATCCTCGTCCAATCAGTCACCACCGTTACACAACTATTATTTACGTTACACTCAACAGAACACCATCCTCGTCCAATCAGTCACCACCGTTACACAACTATTATTTACGTTACACTCAACAGAACACCATCCTCGTCCAATCAGTCACCACCGTTACACAACTATTATTTACGCTATTCCGATT TAACACATCGCTTAT AATTATCACCATC CCGCATACTTCAA CGTCA CCATCA CACTCTATCG ]
[+] EMBL CD144064 [ CGTTACACTCAACACAGCACCATCCTCGTCCAGTCAGTCACCACCATTACACAACTATTATTTACGTTACACTCAACACAGCACCATCCTCGTCCAGTCAGTCACCACCATTACACAACTATTATTTACGTTACACTCAACAGAACACCGTCCTCGGCCAATCAGTCACCACCATTACACAACTATTATTTACGCTATTCCGATTCAAACACATCGCTTATAAATTATCACCATCACCGCATACTTCAACCGTCACCCATCACCACTCTATCGTCATCAATATCACCAACAAACTCTTTTATCACTCGACACAATTAACGCCACAACCAGTTGGTACAAACACCAAATCACAC]
[-] EMBL CD145928 [ TCACCACCGTTACACAACTATTATTTACGTAACACTCAACAGAACACCATCCTCGTCCAATCAGTCACCACCGTTACACAACTATTATTTACTTAACACTCAACAGAACACCATCCTCGTCCAATCAGTCACCACCGTTACACAACTATTATTTACTCTt ]
[-] EMBL CD148024 [ ACCACCGTTACACAACTATTATTTACGTTACACTCAACACAGCACCATCCTCGTCCAGTCAGTCACCACCATTACACAACTATTATTTACGTTACACTCAACAGAACACCGTCCTCGGCCAATCAGTCACCACCGTTACACAACTATTATTTACGCTATTCCGATT T ]
consensusID : consensus_10833#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 473 fasta sequence
[GAGTTGGTGTGATTTGGTGTTTGTACCAACTGGTTGCGGCGTTAATTGTGTCGAGTGATAAAAGAGTAAATAATAGTTGTGTAACGGTGGTGACTGATTGGACGAGGATGGTGTTCTGTTGAGTGTAACGAGAGTTGGTGTGATTTGGTGTTTGTACGAACTGGTTGTGGCGCTTATTATGTCGAGTGATAAAAGAGTAAATAATAGTTGTGTAACTGTGGCGACTGATTGGACGACGATGGAGTTCTGTTGAGTGTAACGAGAGCTGGCGTGATTTGGTGTTTGTACCAACTTGTTGTGGCGATAATTGTGTCGAGTGATAAAAGAGTAAATAATAGTTGTGTAACGGTGGTGACTGATTGGACGAGGATGGTGTCCTGTTGAATGTAACGAGAGTTGGTGTGATTTGGTGGTTGTACCAACTGGTTGTGGCGTTAATTGTGTCCAGTGATAAAAGAGTAAATAATAGTTGT]
[+] EMBL CD179625 [GAGTTGGTGTGATTTGGTGTTTGTACCAACTGGTTGCGGCGTTAATTGTGTCGAGTGATAAAAGAGTAAATAATAGTTGTGTAACGGTGGTGACTGATTGGACGAGGATGGTGTTCTGTTGAGTGTAACGAGAGTTGGTGTGATTTGGTGTTTGTACGAACTGGTTGTGGCGCTTATTATGTCGAGTGATAAAAGAGTAAATAATAGTTGTGTAACTGTGGCGACTGATTGGACGACGATGGAGTTCTGTTGAGTGTAACGAGAGCTGGCGTGATTTGGTGTTTGTACCAACTTGTTGTGGCGATAATTGTGTCGAGTGATAAAAGAGTAAATAATAGTTGTGTAACGGTGGTGACTGATTGGACGAGGATGGTGTCCTGTTGAATGTAACGAGAGTTGGTGTGATTTGGTGGTTGTACCAACTGGTTGTGGCGTTAATTGTGTCCAGTGATAAAAGAGTAAATAATAGTTGT]
[+] EMBL CD115327 [ GTACGAACTGGTTGTGGCGCTAATTATGTCGAGTAATAAAAGAGTAAATAATAGTTGTGTAACGGTGGTGACTGATTGGACGAGGATGGTGTTCTGTTGAGTGTTACGAGAGTTGGTGTGATTTGGTGTTTGTACGAACTGGTTGTGGCGCTAATTATGTCGAGTAATAAAAGAGTAAATAATAGTTGTGTAACGGTGGTGACTGATTGGACGAGGATGGTGTTCTGTTGAGTGTTACGAGAGTTGGTGTGATTTGGTGTTTGTACGAACTGGTTGTGGCGCTAATTATGTCGAGTAATAAAAGAGTAAATAATAGTTGTGTAACGGTGGTGACTGATTGGACGAGGATGGTGTTCTGTTGAGTGTTACGAGAGTTGGAGTGATTTGGAGTTTGTACGAACTGGTTGTGGCGCTAATTATGTCGAGTAATAAAAGAGTAAATAATAGTTGT]
consensusID : consensus_10833#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 374 fasta sequence
[TGAAGTATGCGGTGATGGTGATAATTTATAAGCGATGTGTTAAATCGGAATAGCGTAAATCATAGTTGTGTAACGGTGGTGACTGATTGGCCGAGGACGGTGTTCTGTTGAGTGTAACGTTTGTTGGTGATATTGATGGCGATAGAGTGGTGATGGGTGACGAGTGAAGTATGCGGTGATGGTGATAATTTATAAGCGATGTGTTTGAATCGGAATAGCGTAAATAATAGTTGTGTAATGGTGGTGACTGACTGGACGAGGATGGTGCTGTGTTGAGTGTAACGTAAATAATAGTTGTGTAATGGTGGTGACTGACTGGACGAGGATGGTGCTGTGTTGAGTGTAACGTAAATAATAGTTGTGTAACGGTGGTG]
[-] EMBL CD183512 [TGAAGTATGCGGTGATGGTGATAATTTATAAGCGATGTGTTAAATCGGAATAGCGTAAATCATAGTTGTGTAACGGTGGTGACTGATTGGCCGAGGACGGTGTTCTGTTGAGTGTAACGTTTGTTGGTGATATTGATGGCGATAGAGTGGTGATGGGTGACGAGTGAAGTATGCGGTGATGGTGATAATTTATAAGCGATGTGTTTGAATCGGAATAGCGTAAATAATAGTTGTGTAATGGTGGTGACTGACTGGACGAGGATGGTGCTGTGTTGAGTGTAACGTAAATAATAGTTGTGTAATGGTGGTGACTGACTGGACGAGGATGGTGCTGTGTTGAGTGTAACGTAAATAATAGTTGTGTAACGGTGGTG]
consensusID : consensus_10833#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 349 fasta sequence
[GATTTGGTGTTTGACCAACTGGTTGTGGCGCTAATTATGTCGAGTAATAAAAGAGTAAATAATAGTTGTGTAACGGTGGTGACTGATTGGACAAGGACGGTGTTCTGTTGAGTGTAACGAGAGTTGGTGTGATTTGGTGTTTGTACCAACTGGTTGTGGCGTTAATTGTGTCGAGTGATAAGAGAGTTTGTTGGTGATATTGATGGCGATAGAGTGGTGATGGGTGACGGTTGAAGTATGCGGTGATGGCGATAATTTATAAGCGATGTGTTTGAATCGGAATAGCGTTTGTTGGTGATATTGATGGCGATAGAGTGGTGATGGGTGACGATTGAAGTTTGCAGTGATG]
[+] EMBL CD134352 [GATTTGGTGTTTGACCAACTGGTTGTGGCGCTAATTATGTCGAGTAATAAAAGAGTAAATAATAGTTGTGTAACGGTGGTGACTGATTGGACAAGGACGGTGTTCTGTTGAGTGTAACGAGAGTTGGTGTGATTTGGTGTTTGTACCAACTGGTTGTGGCGTTAATTGTGTCGAGTGATAAGAGAGTTTGTTGGTGATATTGATGGCGATAGAGTGGTGATGGGTGACGGTTGAAGTATGCGGTGATGGCGATAATTTATAAGCGATGTGTTTGAATCGGAATAGCGTTTGTTGGTGATATTGATGGCGATAGAGTGGTGATGGGTGACGATTGAAGTTTGCAGTGATG]
consensusID : consensus_10833#7 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 321 fasta sequence
[GTGTCGAGTGATAAAAGAGTTTGTTGGTGATATTGATGGCGATAGAGTGGTGATGGGTGACGGTTGAAGTATGCGGTGATGGTGATAATTTATAAGCGATGTGTTTAAATCGGAATATCGTAAATAATAGGTGTGTAATGGTGGTGACTGATTGGCCGAGGACGGTGCTCTGTTGAGTGTAACGTTTGTTGGTGATGTTGATGGCGATATAGTGGTGATGGGTGACGAGTGAAGCATGCGGTGATGGTGATCATCTTAAGCGATGCGTTAGACTCGGAATATCGTCAATACTAGGTGTGTAATGGTGGTGACTGACTGTAC]
[+] EMBL CD122594 [GTGTCGAGTGATAAAAGAGTTTGTTGGTGATATTGATGGCGATAGAGTGGTGATGGGTGACGGTTGAAGTATGCGGTGATGGTGATAATTTATAAGCGATGTGTTTAAATCGGAATATCGTAAATAATAGGTGTGTAATGGTGGTGACTGATTGGCCGAGGACGGTGCTCTGTTGAGTGTAACGTTTGTTGGTGATGTTGATGGCGATATAGTGGTGATGGGTGACGAGTGAAGCATGCGGTGATGGTGATCATCTTAAGCGATGCGTTAGACTCGGAATATCGTCAATACTAGGTGTGTAATGGTGGTGACTGACTGTAC]
consensusID : consensus_10833#8 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 276 fasta sequence
[GAAGATGTATTTATTTGTTGTAGCTAAATGTCATTGAGGGTATCGGCTAGACATTGCGAATAATATAGGAAAAGTTGACTACAAGAAGATAAAAAATAGGATTTCATTCTTCTTCTTCCTTCTGTTTTATGGAAGCCATAACATCTTTAAACAGTAACCCTTTGTTTACATGAAAATATATCTTGTCCAGACCGTTAAAAAACAAAAATTCAAAGGCGAAAGCGGATGCGACAGCAGCTCCGACAAAACGTGACGGGTAGCGCAGGATCTTATAGT]
[+] EMBL AA999563 [GAAGATGTATTTATTTGTTGTAGCTAAATGTCATTGAGGGTATCGGCTAGACATTGCGAATAATATAGGAAAAGTTGACTACAAGAAGATAAAAAATAGGATTTCATTCTTCTTCTTCCTTCTGTTTTATGGAAGCCATAACATCTTTAAACAGTAACCCTTTGTTTACATGAAAATATATCTTGTCCAGACCGTTAAAAAACAAAAATTCAAAGG ]
[-] EMBL AI740373 [ TATTTATTTGTTGTAGCTAAATGTCATTGAGGGTATCGGCTAGACATTGCGAATAATATAGGAAAAGTTGACTACAAGAAGATTAAAAATAGGATTTCATTCTTCTTCTTCCTTCTGTTTTATGGAAGCCATAACATCTTTAAACAGTAACCCTTTGTTTACATGAAAATATATCTTGTCCAGACCGTTAAAAAACAAAAATTCAAAGGCGAAAGCGGATGCGACAGCAGCTCCGACAAAACGTGACGGGTAGCGCAGGATCTTATAGT]
consensusID : consensus_10833#9 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 200 fasta sequence
[GGTGTTCTGTTGAGTGTAACGTAATAATAGTTGTGTAATGGTGGTGACTGACTGGACGAGGATGGTGTTCTGTTGAGTGTAACGTAAATAATAGTTGTGTAATGGCGGTGACTGACTGGACGAGGATGGTGTTCTGTTGAGTGTAACGTAAATAATAGTTGTGTAATGGTGGTGACTGACTGGACGAGGATGGTGTTCTG]
[+] EMBL CD187380 [GGTGTTCTGTTGAGTGTAACGTAATAATAGTTGTGTAATGGTGGTGACTGACTGGACGAGGATGGTGTTCTGTTGAGTGTAACGTAAATAATAGTTGTGTAATGGCGGTGACTGACTGGACGAGGATGGTGTTCTGTTGAGTGTAACGTAAATAATAGTTGTGTAATGGTGGTGACTGACTGGACGAGGATGGTGTTCTG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10833#4 ------------------------------------------------------------
consensus_10833#6 ------------------------------------------------------------
consensus_10833#1 ------------------------------CGGTTGAAGTATGCGGTGATGGTGATAATT 30
consensus_10833#7 ------------------------------------------------------------
consensus_10833#5 ------------------------------------------------------------
consensus_10833#9 ------------------------------------------------------------
consensus_10833#0 AGTGTATGGCAAAGTTAAGGTTAGTTAAAATGACGTACATATGAGAGGTAAGTAACAACG 60
consensus_10833#2 ----------------------------CTTGAGCTCACCAACAAACGTTATACTCAACA 32
consensus_10833#3 -----------------------------------ACACCAACTCTCGTAACACTCAACA 25
consensus_10833#8 ------------------------------------------------------------
consensus_10833#4 ------------------------------------------------------GAGTTG 6
consensus_10833#6 ------------------------------------------------------------
consensus_10833#1 TATAAGCGATGTGTTTGAATCAGAATAGCGTTTGTTGGTGATATTGATGGCGATAGAGTG 90
consensus_10833#7 ----------GTGTC-GAGTGATAAAAGAGTTTGTTGGTGATATTGATGGCGATAGAGTG 49
consensus_10833#5 ------------------------------------------------------------
consensus_10833#9 ------------------------------------------------------------
consensus_10833#0 CTTCACAGTAAATGCAGTGTCATATATCAGACAGCGTCAACAACTTCCCACTCTTTTTCC 120
consensus_10833#2 NAACACCGTCCTCGGCCAATCAGTCACCACCATTACACAACTATTATTTACTCTTTTATC 92
consensus_10833#3 GAACACCGTCCTTGTCCAATCAGTCACCACCGTTACACAACTATTATTTACTCTTTTATC 85
consensus_10833#8 ------------------------------------------------------------
consensus_10833#4 GTGTGATTTGGTGTTTGTACCAACTGGTTGCGGCGTTAATT----------GTGTC-GAG 55
consensus_10833#6 ----GATTTGGTGTTTG-ACCAACTGGTTGTGGCGCTAATT----------ATGTC-GAG 44
consensus_10833#1 GTGATGGGTGACGGTTGAAGTATGCGGTGATGGTGATAATTTATAAGCGATGTGTTTGAA 150
consensus_10833#7 GTGATGGGTGACGGTTGAAGTATGCGGTGATGGTGATAATTTATAAGCGATGTGTTTAAA 109
consensus_10833#5 ---------------TGAAGTATGCGGTGATGGTGATAATTTATAAGCGATGTGTT-AAA 44
consensus_10833#9 --------------------------------------------------GGTGTTCTGT 10
consensus_10833#0 TCGGACTTTTCACAATCTTCGACCTTATCATCTTTTTCCTTGAGTTTATTGGCCTCCTCT 180
consensus_10833#2 ACTCGACACAATTTACGCCACAACCAGTTGGTACAAACACCAAATCACACCAACTC-TCG 151
consensus_10833#3 ACTCGACACAATTAACGCCACAACCAGTTGGTACAAACACCAAATCACACCAACTC-TCG 144
consensus_10833#8 -----------------------------------------------GAAGATGTATTTA 13
*
consensus_10833#4 TGATAAAAGAGTAAATAATAGTTGTGTAACGGTGGTGACTGATTGGACGAGGATGGTGTT 115
consensus_10833#6 TAATAAAAGAGTAAATAATAGTTGTGTAACGGTGGTGACTGATTGGACAAGGACGGTGTT 104
consensus_10833#1 TCGGAATAGCGTAAATAATAGTTGTGTAATGGTGGTGACTGACTGGACGAGGATGGTGTT 210
consensus_10833#7 TCGGAATATCGTAAATAATAGGTGTGTAATGGTGGTGACTGATTGGCCGAGGACGGTGCT 169
consensus_10833#5 TCGGAATAGCGTAAATCATAGTTGTGTAACGGTGGTGACTGATTGGCCGAGGACGGTGTT 104
consensus_10833#9 TGAGTGTAACGTAA-TAATAGTTGTGTAATGGTGGTGACTGACTGGACGAGGATGGTGTT 69
consensus_10833#0 TTCGTTTCTCCTGACCAACAACTACACCCTGTTTGTCCGTCAC-GTTCACCAACTCCTCT 239
consensus_10833#2 TTACACTCAACAGAGCACCATCCTCGTCCAGTCAGTCACCACCGTTACACAACTATTATT 211
consensus_10833#3 TTACACTCAACAGAACACCATCCTCGTCCAATCAGTCACCACCGTTACACAACTATTATT 204
consensus_10833#8 TTTGTTGTAGCTAAATGTCATTGAGG--GTATCGGCTAGACATTGCG-AATAATATAGGA 70
* * * *
consensus_10833#4 C-TGTTGAGTGTAA-CGAGAGTTGGTGTGATTTGGTGTTTGTACGAACTGGTTGTGGCGC 173
consensus_10833#6 C-TGTTGAGTGTAA-CGAGAGTTGGTGTGATTTGGTGTTTGTACCAACTGGTTGTGGCGT 162
consensus_10833#1 C-TGTTGAGTGTAA-CGAGAGTTGGTGTGATTTGGTGTTTGTACCAACTGGTTGTGGCGT 268
consensus_10833#7 C-TGTTGAGTGTAA-CG------------------------------------------- 184
consensus_10833#5 C-TGTTGAGTGTAA-CG------------------------------------------- 119
consensus_10833#9 C-TGTTGAGTGTAA-CG------------------------------------------- 84
consensus_10833#0 T-CTCCAGGTGTCGTCGATTCGCCCTGTGGTCCGAGAGTGGTTCGTCTTCTTCTCTTGCC 298
consensus_10833#2 TACGTCACACTCAACAGAGCACCATCCTCGGTGATGCAGAAAGATCTATGACGGAACCAT 271
consensus_10833#3 TACGTTACACTCAACAGAACACCATCCTCGTCCAATCAGTCACCACCGTTACACAACTAT 264
consensus_10833#8 AAAGTTGACTACAAGAAGATAAAA-----AATAGGATTTCATTCTTCTTCTTCCTTCTGT 125
consensus_10833#4 TTATTATGTCGAGTGATAAAAGAGTAAATAATAGTTGTGTAACTG--TGGCGACTGATTG 231
consensus_10833#6 TAATTGTGTCGAGTGATAAGAGAGT------TTGTTG-GTGATAT--TGATGGC-GATAG 212
consensus_10833#1 TAATTGTGTCGAGTGATAAAAGAGT------TTGTTG-GTGATAT--TGATGGC-GATAG 318
consensus_10833#7 ------------------------T------TTGTTG-GTGATGT--TGATGGC-GATAT 210
consensus_10833#5 ------------------------T------TTGTTG-GTGATAT--TGATGGC-GATAG 145
consensus_10833#9 ------------------------TAAATAATAGTTGTGTAATGG--CGGTGACTGACTG 118
consensus_10833#0 CGTCTTGTCCACGTAGTCGACGTAGAGCTCGTCGTCTTGTGGTGTGGTGCTGGATGGTGC 358
consensus_10833#2 T--TTA------ACTGACCTGAAAGCTATGCACACTTGA-CACTGGACGCAGTT--GTAC 320
consensus_10833#3 TATTTACGTTACACTCAACAGAACACCATCCTCGTCCAATCAGTCACCACCGTT--ACAC 322
consensus_10833#8 T--TTATGGAAGCCATAACATCTTTAAACAGTAACCCTTTGTTTACATGAAAATATATCT 183
consensus_10833#4 GACGACGATGGAGTTCTGTTGAGTGTAACGAGAGCTGGCGTGATTTGGTGTTTGTACCAA 291
consensus_10833#6 AGTGGTGATGGGTGACGGTTGAA-GTATGCGGTGATGGCGATAATTTATA-----AGCGA 266
consensus_10833#1 AGTGGTGATGGGTGACGGTTGAA-GTATGCGGTGATGGTGATAATTTATA-----AGCGA 372
consensus_10833#7 AGTGGTGATGGGTGACGAGTGAA-GCATGCGGTGATGGTGATCATCT-TA-----AGCGA 263
consensus_10833#5 AGTGGTGATGGGTGACGAGTGAA-GTATGCGGTGATGGTGATAATTTATA-----AGCGA 199
consensus_10833#9 GACGAGGATGGTGTTCTGTTGAGTGTA-ACGTAAATAATAGT--TGTGTAATGGTGGTGA 175
consensus_10833#0 TCCGGTGTCAGGTGTCGAAGTGGGTCGTTTGCTTGAGTCGGTGACTGATG-CAGTTCCGT 417
consensus_10833#2 ACAAACAGTGAATGACAAAACTT--TGCGGTACACTCAACAGAA----CACCGTCCT--- 371
consensus_10833#3 AACTATTATTTACGCTATTCCGA--TTTAACACATCGCTTATAATTATCACCATCCCGCA 380
consensus_10833#8 TGTCCAGACCGTTAAAAAACAAAAATTCAAAGGCGAAAGCGGATGCGACAGCAGCTCCGA 243
consensus_10833#4 CTTGTTGTGGCGATAATTGTGTCGAGTGATAAA--AGAGTAAATAATAGTTGTGTAACGG 349
consensus_10833#6 TGTGTTTGAATCGGAATAGCGTTTGTTGGTGAT--AT------TGATGGCGATAGAGTGG 318
consensus_10833#1 TGTGTTTGAATCGGAATAGCGTTTGTTGGTGAT--AT------TGATGGCGATAGAGTGG 424
consensus_10833#7 TGCGTTAGACTCGGAATATCGTC-------AAT--AC------TA--GGTG-TGTAATGG 305
consensus_10833#5 TGTGTTTGAATCGGAATAGCGTA-------AAT--AA------TA---GTTGTGTAATGG 241
consensus_10833#9 C-TGACTGGACGAGGATGGTGTTCTG---------------------------------- 200
consensus_10833#0 TTTGTTTTGGTGATGTTTCGGAGGGAAGTCGAC--GTCGTCTTCTTCTCTTGCCCGTCTT 475
consensus_10833#2 --------TGTC-CAATCAGTCACCACCGTTAC--ACAACTATTATTTACTCTTTTATCA 420
consensus_10833#3 TACTTCAACGTCACCATCACACTCTATCGTCATCAATATCACCAACAAACTCTTTTATCA 440
consensus_10833#8 CAAAACGTGACGGGTAGCGCAGGATCTTATAGT--------------------------- 276
consensus_10833#4 TGGTGACTGATTGGACGAGGATGGTGTCCTGTTGAATGTAACGAGAGTTGGTGTGATTTG 409
consensus_10833#6 TGATGGGTGACGATTGAAGTTTGCAGTGATG----------------------------- 349
consensus_10833#1 TGATGGGTGACGGTTGAAGTATGCGGTGATGGTGATAATTTATAAGCGATGTGTTTGAAT 484
consensus_10833#7 TGGTGACTGACTGTAC-------------------------------------------- 321
consensus_10833#5 TGGTGACTGACTGGACGAGGATGGTGCTGTGTTGA------------------------- 276
consensus_10833#9 ------------------------------------------------------------
consensus_10833#0 GTCCACGTAGTCGACGTAGAGCTCGTCGTCTTGTGGTGTGGTGCTGGATGGTGCTCTGTT 535
consensus_10833#2 CTCGACACAATTTACGCCACAACCAGTTGGTACAAACACCAAATCACACCAAGCTCTCGA 480
consensus_10833#3 CTCGACACAATTAACGCCACAACCAGTTGGTACAAACACCAAATCACAC----------- 489
consensus_10833#8 ------------------------------------------------------------
consensus_10833#4 GTGGTTGTACCAACTGGTTGTGGCGTTAATTGTGTCCAGTGATAAAAGAGTAAATAATAG 469
consensus_10833#6 ------------------------------------------------------------
consensus_10833#1 CGGAATAGCGTAAATAATAGTTGTGTAACGGTGGTGACTGATTGGACAAGGACGGTGTTC 544
consensus_10833#7 ------------------------------------------------------------
consensus_10833#5 --GTGTAACGTAAATAATAGTTGTGTAATGGTGGTGACTGACTGGACGAGGATGGTGCTG 334
consensus_10833#9 ------------------------------------------------------------
consensus_10833#0 GAGTGTAACGTAAATAATAGTTGTGTAACGGTGGTGACTGACTGGACGAGGATGGTGCTC 595
consensus_10833#2 TACACTCAACAGAGCACCATCCTCGTCCAGTCAGTCACCACCGTTACACAACTATTATTT 540
consensus_10833#3 ------------------------------------------------------------
consensus_10833#8 ------------------------------------------------------------
consensus_10833#4 TTGT-------------------------------------------------------- 473
consensus_10833#6 ------------------------------------------------------------
consensus_10833#1 TGTTGAGTGTTACGAGAGTTGGTGTGATTTGGTGTTTGTACGAACTGGTTGTGGCGCTAA 604
consensus_10833#7 ------------------------------------------------------------
consensus_10833#5 TGTTGAGTGTAACGTAAATAATAGTTGTGTAACGGTGGTG-------------------- 374
consensus_10833#9 ------------------------------------------------------------
consensus_10833#0 TGTTGAGTGTAACGTTTGTTGGTGATATTGATGGCGATAGAGTGGTGATGGGTGACGGTT 655
consensus_10833#2 ACGTCACACTCAACAGAG------------------------------------------ 558
consensus_10833#3 ------------------------------------------------------------
consensus_10833#8 ------------------------------------------------------------
consensus_10833#4 ----------
consensus_10833#6 ----------
consensus_10833#1 TTATGTCGAG 614
consensus_10833#7 ----------
consensus_10833#5 ----------
consensus_10833#9 ----------
consensus_10833#0 GAAGTA---- 661
consensus_10833#2 ----------
consensus_10833#3 ----------
consensus_10833#8 ----------
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||