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Schistosoma mansoni
cluster # 10836 cluster # 10836       Sequences # 23       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10836#0 length = 1523 sequences # 22  
consensus_10836#1 length = 495 sequences # 1  

consensusID : consensus_10836#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 22
consensus length = 1523
fasta sequence
                              [CTCTCTTCGCAATTGGATTTGTGGAGAGCCAGTCCGACGAATACCGGATTCGGTAATACCCTACTGATGACTCTCAAGATTGCTTGTACAGATCTTCTGTGCTTATCAGATATCCTTACAAATCATCTTGCTTCTTCTTTGGGTATCGAACTACACACTGAATCGAGTTGTTCTGAAAGTTCTCAAGGAATTCGAAACCAAATGTTTGGTATCACTACAGGCTTTGATATATTGTTGGATCATTTAAATTCATTTCTGCAAGAGAATGAGGATGATGAAAACTTCGACTTTGCTCAAGACTTTATAACAGGTTTTGAGAATTGTATTAAATCATACTGTGATATGGATGAAACCACATTACGTGCTAAGGTGATACACCAAAAGTCCTCATACATAGAGTTCAGGAAATCTCAAATGCCTTCACCTATGATGGTTGATCCGTCAAACGGTGAAATCCAACGAAATGTATTTGATGATGAAGATTTGCACGGTGATGATTTACCGTTTTTAGATGCATATTCTGATTTGCCTTCGGATGAAATGAACCATCCTATATCAGCTGTTCCAAAAAATAATGTACACACTGGTCGTCTTAAATTACAATCAAAAATATCTTCCTTACCTGATTGGACTCCCAAACCAGGAGAATTGCCTAACAGTATGATAAATGGACTTGATCCTAATCCGAATGCTACTCTGTCTATAAGTAATGACCTATCAGTTCCAAATGAAACAGAAGGTTGGCACGCTGTTTTACCCCCTGCCTGGATTCATGTAGTCACCAGCGATATATCTGCCATGTCACAT-AACCCTCCAACTACTGATGATCCTAATCAATTCGGACGATTTAGTGATGGATATATAGCAGGCATGCCTGCGAAAAGAAGAAAGGTTATGCAAGAACACTC-AGCATCTTTATTTCAATCACCTGATCAATTATTCATAGAATGCTTATCCGATGCTGTTGCGAGTGATTATGTTAATAAAGAGAAGACAAACGAACATTCGAATAATGATGTAGAAGATAAATACAAGTCGAATCTCAGAAGACTACCTGCTGCAGACATTAAACTCGTAAACTCTTTGAGAGACGTTGTCTCGGATCGACTAGCAGTACGCTTGACGAATGACCCAGACTTTGATACAGCACAATTCCCACTGTCTACTCAGAAATTTTTGAAACGAGATCCAAAGGCACGAATGTAACATAATTTAGGTGTGTGCAGGGATAACGTTCTAGCTTGTTTAAAATACTTTAGTGGCATATAGCAGTGGCTATTATAATATATGGATTTCATACTATTTCAAGCAGGAT-CCAAATTTTATTGTGTATTGTCAGTTTCACAAGTATGTATGCTTACTTTTAGAATGTCAAAAACT-AACAGTATGATGTCAAGTTTTTTTTATGAACTTGTCACAGTTAATGGTTCGGGACGTTATGAACCTGTGTATGATGTTAACTGCCATAAAGTTTAATAAAAACACAAGTTTGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CD127322             [CTCTCTTCGCAATTGGATTTGGGGAGAGCCAGTCCGACGAGTACCGGATTCGGTAATACCCTACTGATGACTCTCAAGATTGCTTGGACAGATCTTCTGTGCTTATCAGATATCCTTACAAATCATCTTGCTTCTTCTTTGGGTGTCGAACTACACACTGAATCGAGTTGTTCTGAAGGTTCTCACGGAATTCTAAACCAAATGTGTGGTGTCACTACAGGCTTTGATATATTGCTGGATCATTTAAATGCATTTCTGCAAGAGAATGAGGATGATGAAAACTTCGACTTTGCTCAAGACTTTATAACAGGTTTTGAGAATTGCATTATATCATACTGTGATATGGATGAAACCACATTACGTGCTAAGGTGATACACCAAAAGTCCTCATACATAGAGTTCAGGAAATCTCAAATGCCTTCACCTATGATGGTTGATCCGTCAAACGGTGAAATCCAACGAAATGTATTTGATGATGAAGATCTGCACGGTGATGATTTACCGTTTTTAGATGCCTATTCTGATTTGCCTTCGGATGAAATGAACCATCCTATATCAGCTGTTCCCAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD127638             [   TCTTCTCAATTGGATTTGTGGAGAGCCACTCCGACGAATACCGGATTCGGTAATACCCTACTGATGACTCTCAAGATTGCTTGTACAGATCTTCTGTGCTTATCAGATATCCTTACAAATCATCTTGCTTCTTCTTTGGGTATCGAACTACACACTGAATCGAGTTGTTCTGAAAGTTCTCAAGGAATTCGAAACCAAATGTTTGGTATCACTACAGGCTTTGATATATTGTAGGATCATTTAAATTCATTTCTGCAAGAGAATGAGGATGATGAAAACTTCGACTTTGCTCAAGACTTTATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD127108             [    CTTCGCAATTGGATTTGTGGAGAGCCAGTCCGACGAATACCGGATTCGGTAATACCCTACTGATGACTCTCAAGATTGCTTGTACAGATCTTCTGTGCTTATCAGATATCCTTACAAATCATCTTGCTTCTTCTTTGGGTATCGAACTACACACTGAATCGAGTTGTTCTGAAAGTTCTCAAGGAATTCGAAACCAAATGTTTGGTATCACTACAGGCTTTGATATATTGTTGGATCATTTAAATTCATTTCTGCAAGAGAATGAGGATGATGAAAACTTCGACTTTGCTCAAGACTTTATAACAGGTTTTGAGAATTGTATTAAATCATACTGTGATATGGATGAAACCACATTACGTGCTAAGGTGATACACCAAAAGTCCTCATACATAGAGTTCAGGAAATCTCAAATGCCTTCACCTATGATGGTTGATCCGTCAAACGGTGAAATCCAACGAAATGTATTTGATGATGAAGA TTGCACGGTGATGATTTACCGGTTTTAGATGCATATTCTGATTTGCCTTCGGATGAAATGAACCATCCTATTTCAGCTGTTCCAAAAAATAATG ACACACTGGTCGTCTTAAATTACAATCAAAAATAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD095800             [                                              GATTCGGTAATACCCTACTGATGACTCTCAAGATTGCTTGTACAGATCTTCTGTGCTTATCAGATATCCTTACAAATCATCTTGCTTCTTCTTTGGGTATCGAACTACACACTGAATCGAGTTGTTCTGAAAGTTCTCAAGGAATTCGAAACCAAATGTTTGGTATCACTACAGGCTTTGATATATTGTTGGATCATTTAAATTCATTTCTGCAAGAGAATGAGGATGATGAAAACTTCGACTTTGCTCAAGACTTTATAACAGGTTTTGAGAATTGTATTAAATCATACTGTGATATGGATGAAACCACATTACGTGCTAAGGTGATACACCAAAAGTCCTCATACATAGAGTTCAGGAAATCTCAAATGCCTTCACCTATGATGGTTGATCCGTCAAACGGTGAAATCCAACGAAATGTATTTGATGATGAAGATTTGCACGGTGATGATTTACCGTTTTTAGATGCATATTCTGATTTGCCTTCGGATGAAATGAACCATCCTATATCAGCTGTTCCAAAAAATAACGTACACACTGGTCGTCTT AATTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD095630             [                                              GATTCGGTAATACCCTACTGATGACTCTCAAGATTGCTTGTACAGATCTTCTGTGCTTATCAGATATCCTTACAAATCATCTTGCTTCTTCTTTGGGTATCGAACTACACACTGAATCGAGTTGTTCTGAAAGTTCTCAAGGAATTCGAAACCAAATGTTTGGTATCACTACAGGCTTTGATATATTGTTGGATCATTTAAATTCATTTCTGCAAGAGAATGAGGATGATGAAAACTTCGACTTTGCTCAAGACTTTATAACAGGTTTTGAGAATTGTATTAAATCATACTGTGATATGGATGAAACCACATTACGTGCTAAGGTGATACACCAAAAGTCCTCATACATAGAGTTCAGGAAATCTCAAATGCCTTCACCTATGATGGTTGATCCGTCAAACGGTGAAATCCAACGAAATGTATTTGATGATGAAGATTTGCACGGTGATGATTTACCGTTTTTAGATGCATATTCTGATTTGCCTTCGGATGAAATGAACCATCCTATATCAGCTGTTCCAAAAAATAACGTACACACTGGTCGTCTTAAATTACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD095957             [                                              GATTCGGTAATACCCTACTGATGACTCTCAAGATTGCTTGTACAGATCCTCTGTGCTTATCAGATATCCTTACAAATCATCTTGCTTCCTCTTTGGGTATCGAACTACACACTGAATCGAGTTGTTCTGAAAGTTCTCAAGGAATTCGAAACCAAATGTTTGGTATCACTACAGGCTTTGATATATTGTTGGATCATTTAAATTCATTTCTGCAAGAGAATGAGGATGATGAAAACTTCGACTTTGCTCAAGACTTTATAACAGGTTTTGAGAATTGTATTAAATCATACTGTGATATGGATGAAACCACATTACGTGCTAAGGTGATACACCAAAAGTCCTCATACATAGAGTTCAGGAAATCTCAAATGCCTTCACCTATGATGGTTGATCCGTCAAACGGTGAAATCCAACGAAATGTATTTGATGATGAAGATTTGCACGGTGATGATTTACCGTTTTTAGATGCATATTCTGATTTGCCTTCGGATGAAATGAACCATCCTATATCAGCTGNTCC AAAAATAATGTACACACTGGTCGTCTTAAATTACc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD121186             [                                                                               TTGCTTGTACAGATCTTCTGTGCTTATCAGATATCCTTACAAATCATCTTGCTTCTTCTTTGGGTATCGAACTACACACTGAATCGAGTTGTTCTGAAAGTTCTCAAGGAATTCGAAACCAAATGTTTGGTATCACTACAGGCTTTGATATATTGTTGGATCATTTAAATTCATTTCTGCAAGAGAATGAGGATGATGAAAACTTCGACTTTGCTCAAGACTTTATAACAGGTTTTGAGAATTGTATTAAATCATACTGTGATATGGATGAAACCACATTACGTGCTAAGGTGATACACCAAAAGTCCTCATACATAGAGTTCAGGAAATCTCAAATGCCTTCACCTATGATGGTTGATCCGTCAAACGGTGAAATCCAACGAAATGTATTTGATGATGAAGATTTGCACGGTGATGATTTACCGTTTTTAGATGCATATTCTGATTTGCCTTCGGATGAAATGAACCATCCTATATCAGCTGTTCCAAAAAATAATGTACACACTGGTCGTCTTAAATTACAATCANAAATATCTTCCTTACCTGATTGGACTCCCAAACCAGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL AI975212             [                                                                                                                                                                     AGTTGTTCTGAAAGTTCTCAAGGAATTCGAAACCAAATGTTTGGTATCACTACAGGCTTTGATATATTGTTGGATCATTTAAATTCATTTCTGCAAGAGAATGAGGATGATGAAAACTTCGACTTTGCTCAAGACTTTATAACAGGTTTTGAGAATTGTATTAAATCATACTGTGATATGGATGAAACCACATTACGTGCTAAGGTGATACACCAAAAGTCCTCATACATAGAGTTCAGGAAATCTCAAATGCCTTCACCTATGATGGTTGATCCGTCAAACGGTGAAATCCAACGAAATGTATTTGATGATGAAGATTTGCACGGTGATGATTTACCGTTTTTAGATGCATATTCTGATTTGCCTTCGGATGAAATGAACCATCCTATATCAGCTGTTCCAAAAAATAATGTACACACTGGTCGTCTTAAATTACAATCAAAAATATCTTCCTTACCTGATTGGACTCCCAAACCAGGAGAATTGCCTAACAGTATGATAAATGGACTTGATCCTAATCCGAATGCTACTCTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD140877             [                                                                                                                                                                                                                                                            TTTCTGCAAGAGAATGAGGATGATGAAAACTTCGACTTTGCTCAAGACTTTATAACAGGTTTTGAGAATTGTATTAAATCATACTGTGATATGGATGAAACCACATTACGTGCTAAGGTGATACACCAAAAGTCCTCATACATAGAGTTCAGGAAATCTCAAATGCCTTCACCTATGATGGTTGATCCGTCAAACGGTGAAATCCAACGAAATGTATTTGATGATGAAGATTTGCACGGTGATGATTTACCGTTTTTAGATGCATATTCTGATTTGCCCTCGGATGAAATGAACCATCCTATATCAGCTGTTCCAAAAAATAATGTACACACTGGTCGTCTTAAATTACAATCAAAAATATCTTCCTTACCTGATTGGACTCCCAAACCAGGAGAATTGCCTAACAGTATGATAAATGGACTTGATCCTAATCCGAATGCTACTCTGTCTATTAGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD197526             [                                                                                                                                                                                                                                                                                                                                                                CCACATTACGTGCTAAGGTGATACACCAAAAGTCCTCATACATAGAGTTCAGGAAATCTCAAATGCCTTCACCTATGATGGTTGATCCGTCAAACGGTGAAATCCAACGAAATGTATTTGATGATGAAGATTTGCACGGTGATGATTTACCGTTTTTAGATGCATATTCTGATTTGCCTTCGGATGAAATGAACCATCCTATATCAGCTGTTCCAAAAAATAATGTACACACTGGTCGTCTTAAATTACAATCAAAAATATCTTCCTTACCTGATTGGACTCCCAAACCAGGAGAATTGCCTAACAGTATGATAAATGGACTTGATCCTAATCCGAATGCTACTCTGTCTATAAGTAATGACCTATCAGTTCCAAATGAAACAGAAGGTTGGCACGCTGTTTTACTCCCTGCCTGGATTCATGTAGTCACCAGCGATATATCTGCCATGTCACAT AACCCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD082500             [                                                                                                                                                                                                                                                                                                                                                                                                        CATAGAGTTCAGGAAATCTCAAATGCCTTCACCTATGATGGTTGATCCGTCAAACGGTGAAATCCAACGAAATGTATTTGATGATGAAGATTTGCACGGTGATGATTTACCGTTTTTAGATGCATATTCTGATTTGCCTTCGGATGAAATGAACCATCCTATATCAGCTGTTCCAAAAAATAATGTACACACTGGTCGTCTTAAATTACAATCAAAAATATCTTCCTTACCTGATTGGACTCCCAAACCAGGAGAATTGCCTAACAGTATGATAAATGGACTTGATCCTAATCCGAATGCTACTCTGTCTATAAGTAATGACCTATCAGTTCCAAATGAAACAGAAGGTTGGCACGCTGTTTTACCCCCTGCCTGGATTCATGTAGTCACCAGCGATATATCTGCCATGTCACAT AACCCTCCAACTACTGATGATCCTAATCAATTCGGACGATTTAGTGATGGATATATAGCAGGCATGCCTGCGAAAAGAAGAAAGGTTATGCAAGAACACTC AGCATCTTTATTTCAATCACCTGATCAATTATTCATAGAATGCTTATCCGATGCTGTTGCGAGTGATTATGTTAATAAAGAGAAGAACAACGAACATTCGAAATATGATGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD095719             [                                                                                                                                                                                                                                                                                                                                                                                                                      AATCTCAAATGCCTTCACCTATGATGGTTGATCCGTCAAACGGTGAAATCCAACGAAATGTATTTGATGATGAAGATTTGCACGGTGATGATTTACCGTTTTTAGATGCATATTCTGATTTGCCTTCGGATGAAATGAACCATCCTATATCAGCTGTTCCAAAAAATAATGTACACACTGGTCGTCTTAAATTACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD059758             [                                                                                                                                                                                                                                                                                                                                                                                                                                   TTCACCTATGATGGTTGATCCGTCAAACGGTGAAATCCAACGAAATGTATTTGATGATGAAGATTTGCACGGTGATGATTTACCGTTTTTAGATGCATATTCTGATTTGCCTTCGGATGAAATGAACCATCCTATATCAGCTGTTCCAAAAAATAATGTACACACTGGTCGTCTTAAATTACAATCAAAAATATCTTCCTTACCTGATTGGACTCCCAAACCAGGAGAATTGCCTAACAGTATGATAAATGGACTTGATCCTAATCCGAATGCTACTCTGTCTATAAGTAATGACCTATCAGTTCCAAATGAAACAGAAGGTTGGCACGCTGTTTTACCCCCTGCCTGGATTCATGTAGTCACCAGCGATATATTTGCCATGTCACAT AACCCTCCAACTACTGATGATCCTAATCAATTCGGACGATTTAGTGATGGATATATAGCAGGCATGCCTGCGAAAAGAAGAAAGGTTATGCAAGAACACTC AGCATCTTTATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD059765             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ACCAGCGATATATCTGCC TGTCACATAAACCCTCCAACTACTGATGATCCTAATCAATTCGGACGATTTAGTGATGGATATATAGCAGGCATGCCTGCGAAAAAAAAAAAGGTTATGCAAAAACACTC AGCATCTTTATTTCAACCACCTGATCAATTATTCATAGAATGCTTATCCGATGCTGTTGCAAGTGATTATGTTAATAAAGAGAAGACAAACGAACATTCAAATAATGATGTAAAAGATAAATACAAGTCGAATCTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD189503             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ACCAGCGATATATCTGCCATGTCACAT AACCCTCCAACTACTGATGATCCTAATCAATTCGGACGATTTAGTGATGGATATATAGCANGCATGCCTGCGAAAAGAAGAAAGG TATGCAAGAACACTC AGCATCTNTATTTCNATCACCTGATCAATTATTCATAGAATGCTTATCCGATGCTGNTGCGAGTGATTATGTTAATAAAGAGAAGACAAACGAACATTCGAATAATGATGTAGAAGAATAATACCAGTCGAATCTCAGAAGACTACCTGCTGCAGACATTAAACTCGTAAACTCTTTGAGAGACGTTGTCTCGGATCGACTAGCAGTACGCTTGACG                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD112206             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CTAATCAATTCGGACGATTTAGTGATGGATACATAGCAGGCATGCCTGCGAAAAGAAGAAAGGTTATGCAAGAACACTC AGCATCTTTATTTCGATCACCTGATCAATTATTCATAGAATGCTTATCCGATGCTGTTGCGAGTGATTATGTTAATAAAGAGAAGACAAACGAACATTCGAATAATGATGTAGAAGATAAATACAAGTCGAATCTCAGAAGACTACCTGCTGCAGACATTAAACTCGTAAACTCTTTGAGAGACGTTGTCTCGGATCGACTAGCAGTACGCTTGACGAATGACCCAGAC                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD097000             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GAAAAGAAGAAAGGTTATGCAAGAACACTC AGCATCTTTATTTCAATCACCTGATCAATTATTCATAGAATGCTTATCCGATGCTGTTGCGAGTGATTATGTTAATAAAGAGAAGACAAACGAACATTCGAATAATGATGTAGAAGATAAATACAAGTCGAATCTCAGGAGACTACCTGCTGCAGACATTAAACTCGTAAACTCTTTGAGAGACGTTGTCTCGGATCGACTAGCAGTACGCTTGACGAATGACCCAGACTTTGATACAGCACAATTCCCACTGTCTACTCAGAAATTTTTGAAACGAGATCCAAAGGCACGAATGTAACATAATTTAGGTGTGTGCGGGGATAACGTTCTAGCTTGTTTAAAATACTTTAGTGGCATATAGCAGTGGCTATTATAATATATGGATTTCATACTATTTCAAGCAGGAT Caac                                                                                                                                                                                                             ]
[-] EMBL CD076095             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GAAAGGTTATGCAAGAACACTC AGCATCTTTATTTCAATCACCTGATCAATTATTCATAGAATGCTTATCCGATGCTGTTGCGAGTGATTATGTTAATAAAGAGAAGACAAACGAACATTCGAATAATGATGTAGAAGATAAATACAAGTCGAATCTCAGAAGACTACCTGCTGCAGACATTAAACTCGTAAACTCTTTGAGAGACGTTGTCTCGGATCGACTAGCAGTACGCTTGACGAATGACCCAGACTTTGATACAGCACAATTCCCACTGTCTACTCAGAAATTTTTGAAACGAGATCCAAAGGCACGAATGTAACATAATTTAGGTGTGTGCAGGGATAACGTTCTAGCTTGTTTAAAATACTTTAGTGGCATATAGCAGTGGCTATTATAATATATGGATTTCATACTATTTCAAGCAGGATACCAAATTTTATTGTGTATTGTCAGTTTCACAAGTATGTATGCTTACTTTTAGAATGTCAAAAACT AACAGTATGATGTCAAGTTTTTTTTATGAACTTGTCACAGTTAATGGTTCGGGACGTTATGAACCTGTGTATGATGTTAACTGCCATAAAGTTTAATAAAAACAC                                      ]
[-] EMBL CD165221             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GCAAG ACACTCNAGCATCTTTATTTCAATCACCTGATCAATTATTCATAGAATGCTTATCCGATGCTGTTGCGAGTGATTATGTTAATAAAGAGAAGACAAACGAACATTCGAATAATGATGTAGAAGATAAATACAAGTCGAATCTCAGAAGACTACCTGCTGCAGACATTAAACTCGTAAACTCTTTGAGAGACGTTGTCTCGGATCGACTAGCAGTACGCTTGACGAATGACCCAGACTTTGATACAGCACAATTCCCACTGTCTACTCAGAAATTTTTGAAACGAGATCCAAAGGCACGAATGTAACATAATTTAGGTGTGTGCAGGGATAACGTTCTAGCTTGTTTAAAATACTTTAGTGGC                                                                                                                                                                                                                                                                      ]
[+] EMBL CD135576             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AAACTCTTTGAGAGACGTTGTCTCGGATCGACTAGCAGTACGCTTGACGAATGACCCAGACTTTGATACAGCACAATTCCCACTGTCTACTCAGAAATTTTTGAAACGAGATCCAAAGGCACGAATGTAACATAATTTAGGTGTGTGCAGGGATAACGTTCTAGCTTGTTTAAAATACTTTAGTGGCATATAGCAGTGGCTATTATAATATATGGATTTCATACTATTTCAAGCAGGATACCAAATTTTATTGTGTATTGTCAGTTTCACAAGTATGTATGCTTACTTTTAGAATGTCAAAAAC                                                                                                                                                 ]
[-] EMBL CD135040             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TGAAACGAGATCCAAAGGCACGAATGTAACATAATTTAGGTGTGTGCAGGGATAACGTTCTAGCTTGTTTAAAATACTTTAGTGGCATATAGCAGTGGCTATTATAATATATGGATTTCATACTATTTCAAGCAGGATACCAAATTTTATTGTGTATTGTCAGTTTCACAAGTATGTATGCTTACTTTTAGAATGTCAAAAACT AACAGTATGATGTCAAGTTTTTTTTATGAA                                                                                                                 ]
[-] EMBL AI394811             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ggATGTC AAAACTAAACAGTATGATGTC AGTTTTTTTTATGAACTTGTCACAGTTAATGGTTCGGGACGTTATGAACCTGTGTATGATGTTAACTGCCATAAAGTTTAATAAAAACACAAGTTTGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_10836#0 CTCTCTTCGCAATTGGATTTGTGGAGAGCCAGTCCGACGAATACCGGATTCGGTAATACC CTACTGATGACTCTCAAGATTGCTTGTACAGATCTTCTGTGCTTATCAGATATCCTTACA AATCATCTTGCTTCTTCTTTGGGTATCGAACTACACACTGAATCGAGTTGTTCTGAAAGT TCTCAAGGAATTCGAAACCAAATGTTTGGTATCACTACAGGCTTTGATATATTGTTGGAT CATTTAAATTCATTTCTGCAAGAGAATGAGGATGATGAAAACTTCGACTTTGCTCAAGAC TTTATAACAGGTTTTGAGAATTGTATTAAATCATACTGTGATATGGATGAAACCACATTA CGTGCTAAGGTGATACACCAAAAGTCCTCATACATAGAGTTCAGGAAATCTCAAATGCCT TCACCTATGATGGTTGATCCGTCAAACGGTGAAATCCAACGAAATGTATTTGATGATGAA GATTTGCACGGTGATGATTTACCGTTTTTAGATGCATATTCTGATTTGCCTTCGGATGAA ATGAACCATCCTATATCAGCTGTTCCAAAAAATAATGTACACACTGGTCGTCTTAAATTA CAATCAAAAATATCTTCCTTACCTGATTGGACTCCCAAACCAGGAGAATTGCCTAACAGT ATGATAAATGGACTTGATCCTAATCCGAATGCTACTCTGTCTATAAGTAATGACCTATCA GTTCCAAATGAAACAGAAGGTTGGCACGCTGTTTTACCCCCTGCCTGGATTCATGTAGTC ACCAGCGATATATCTGCCATGTCACATAACCCTCCAACTACTGATGATCCTAATCAATTC GGACGATTTAGTGATGGATATATAGCAGGCATGCCTGCGAAAAGAAGAAAGGTTATGCAA GAACACTCAGCATCTTTATTTCAATCACCTGATCAATTATTCATAGAATGCTTATCCGAT GCTGTTGCGAGTGATTATGTTAATAAAGAGAAGACAAACGAACATTCGAATAATGATGTA GAAGATAAATACAAGTCGAATCTCAGAAGACTACCTGCTGCAGACATTAAACTCGTAAAC TCTTTGAGAGACGTTGTCTCGGATCGACTAGCAGTACGCTTGACGAATGACCCAGACTTT GATACAGCACAATTCCCACTGTCTACTCAGAAATTTTTGAAACGAGATCCAAAGGCACGA ATGTAACATAATTTAGGTGTGTGCAGGGATAACGTTCTAGCTTGTTTAAAATACTTTAGT GGCATATAGCAGTGGCTATTATAATATATGGATTTCATACTATTTCAAGCAGGATCCAAA TTTTATTGTGTATTGTCAGTTTCACAAGTATGTATGCTTACTTTTAGAATGTCAAAAACT AACAGTATGATGTCAAGTTTTTTTTATGAACTTGTCACAGTTAATGGTTCGGGACGTTAT GAACCTGTGTATGATGTTAACTGCCATAAAGTTTAATAAAAACACAAGTTTGGCAAAAAA AAAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_10836#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 495
fasta sequence
                              [ATCATGCGAAGATAGTAGAGCGGTGGTCCGGTACAATTTATAAGTGTGTTTACAAGTGGATTGAATGTGTAAATATGGTGAAACGTGTGAATTATCTATATTATATACAAATAGATTTTCCCTTACGTGAGTGTTCATTACTATCTTTCAGTCAAACGGTGAAATCCAACGAAATGTATTTGATGATGAAGATTTGCACGGTGATGATTTACCGTTTTTAGATGCATATTCTGATTTGCCTTCGGATGAAATGAACCATCCTATATCAGCTGTTCCAAAAAATAATGTACACACTGGTCGTCTTAAATTACAATCAAAAATATCTTCCTTACCTGATTGGACTCCCAAACCAGGAGAATTGCCTAACAGTATGATAAATGGACTTGATCCTAATCCGAATGCTACTCTGTCTATAAGTAATGAGCTATCAGTTCCAAATGAAACAGAAGGTTGGCACGCTGTTTTACCCCCTGTCTGGATTCATGTAGTCACCAG]

[+] EMBL CD191278             [ATCATGCGAAGATAGTAGAGCGGTGGTCCGGTACAATTTATAAGTGTGTTTACAAGTGGATTGAATGTGTAAATATGGTGAAACGTGTGAATTATCTATATTATATACAAATAGATTTTCCCTTACGTGAGTGTTCATTACTATCTTTCAGTCAAACGGTGAAATCCAACGAAATGTATTTGATGATGAAGATTTGCACGGTGATGATTTACCGTTTTTAGATGCATATTCTGATTTGCCTTCGGATGAAATGAACCATCCTATATCAGCTGTTCCAAAAAATAATGTACACACTGGTCGTCTTAAATTACAATCAAAAATATCTTCCTTACCTGATTGGACTCCCAAACCAGGAGAATTGCCTAACAGTATGATAAATGGACTTGATCCTAATCCGAATGCTACTCTGTCTATAAGTAATGAGCTATCAGTTCCAAATGAAACAGAAGGTTGGCACGCTGTTTTACCCCCTGTCTGGATTCATGTAGTCACCAG]


>consensus_10836#1 ATCATGCGAAGATAGTAGAGCGGTGGTCCGGTACAATTTATAAGTGTGTTTACAAGTGGA TTGAATGTGTAAATATGGTGAAACGTGTGAATTATCTATATTATATACAAATAGATTTTC CCTTACGTGAGTGTTCATTACTATCTTTCAGTCAAACGGTGAAATCCAACGAAATGTATT TGATGATGAAGATTTGCACGGTGATGATTTACCGTTTTTAGATGCATATTCTGATTTGCC TTCGGATGAAATGAACCATCCTATATCAGCTGTTCCAAAAAATAATGTACACACTGGTCG TCTTAAATTACAATCAAAAATATCTTCCTTACCTGATTGGACTCCCAAACCAGGAGAATT GCCTAACAGTATGATAAATGGACTTGATCCTAATCCGAATGCTACTCTGTCTATAAGTAA TGAGCTATCAGTTCCAAATGAAACAGAAGGTTGGCACGCTGTTTTACCCCCTGTCTGGAT TCATGTAGTCACCAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10836#0      CTCTCTTCGCAATTGGATTTGTGGAGAGCCAGTCCGACGAATACCGGATTCGGTAATACC 60
consensus_10836#1      ------------------------------------------------------------
                                                                                   

consensus_10836#0      CTACTGATGACTCTCAAGATTGCTTGTACAGATCTTCTGTGCTTATCAGATATCCTTACA 120
consensus_10836#1      ------------------------------------------------------------
                                                                                   

consensus_10836#0      AATCATCTTGCTTCTTCTTTGGGTATCGAACTACACACTGAATCGAGTTGTTCTGAAAGT 180
consensus_10836#1      ------------------------------------------------------------
                                                                                   

consensus_10836#0      TCTCAAGGAATTCGAAACCAAATGTTTGGTATCACTACAGGCTTTGATATATTGTTGGAT 240
consensus_10836#1      ------------------------------------------------------------
                                                                                   

consensus_10836#0      CATTTAAATTCATTTCTGCAAGAGAATGAGGATGATGAAAACTTCGACTTTGCTCAAGAC 300
consensus_10836#1      --------------------ATCATGCGAAGATAGT-AGAGCGGTGGTCCGGTACAA--- 36
                                           *      ** ***  * * * *   *     *  ***   

consensus_10836#0      TTTATAACAGGTTTTGAGAATTGTATTAAATCATACTGTGATATGGATGAAACCACATTA 360
consensus_10836#1      TTTATAA-GTGTGTTTACAAGTGGATTGAATG----TGTAAATATGGTGAAAC------- 84
                       *******   ** ** * ** ** *** ***     *** *    * ******       

consensus_10836#0      CGTGCTAAGGTGATACACCAAAAGTCCTCATACATAGAGTTCAGGAAATCTCAAATGCCT 420
consensus_10836#1      -------GTGTGAATTATCTATATTATATACAAATAGATTT-------TCCCTTACGTGA 130
                                ****   * * * * *    * * ***** **       ** *  * *   

consensus_10836#0      TCACCTATGATGGTTGATCCGTCAAACGGTGAAATCCAACGAAATGTATTTGATGATGAA 480
consensus_10836#1      GTGTTCATTACTATCTTTCAGTCAAACGGTGAAATCCAACGAAATGTATTTGATGATGAA 190
                             ** *   *   ** ****************************************

consensus_10836#0      GATTTGCACGGTGATGATTTACCGTTTTTAGATGCATATTCTGATTTGCCTTCGGATGAA 540
consensus_10836#1      GATTTGCACGGTGATGATTTACCGTTTTTAGATGCATATTCTGATTTGCCTTCGGATGAA 250
                       ************************************************************

consensus_10836#0      ATGAACCATCCTATATCAGCTGTTCCAAAAAATAATGTACACACTGGTCGTCTTAAATTA 600
consensus_10836#1      ATGAACCATCCTATATCAGCTGTTCCAAAAAATAATGTACACACTGGTCGTCTTAAATTA 310
                       ************************************************************

consensus_10836#0      CAATCAAAAATATCTTCCTTACCTGATTGGACTCCCAAACCAGGAGAATTGCCTAACAGT 660
consensus_10836#1      CAATCAAAAATATCTTCCTTACCTGATTGGACTCCCAAACCAGGAGAATTGCCTAACAGT 370
                       ************************************************************

consensus_10836#0      ATGATAAATGGACTTGATCCTAATCCGAATGCTACTCTGTCTATAAGTAATGACCTATCA 720
consensus_10836#1      ATGATAAATGGACTTGATCCTAATCCGAATGCTACTCTGTCTATAAGTAATGAGCTATCA 430
                       ***************************************************** ******

consensus_10836#0      GTTCCAAATGAAACAGAAGGTTGGCACGCTGTTTTACCCCCTGCCTGGATTCATGTAGTC 780
consensus_10836#1      GTTCCAAATGAAACAGAAGGTTGGCACGCTGTTTTACCCCCTGTCTGGATTCATGTAGTC 490
                       ******************************************* ****************

consensus_10836#0      ACCAGCGATATATCTGCCATGTCACATAACCCTCCAACTACTGATGATCCTAATCAATTC 840
consensus_10836#1      ACCAG------------------------------------------------------- 495
                       *****                                                       

consensus_10836#0      GGACGATTTAGTGATGGATATATAGCAGGCATGCCTGCGAAAAGAAGAAAGGTTATGCAA 900
consensus_10836#1      ------------------------------------------------------------
                                                                                   

consensus_10836#0      GAACACTCAGCATCTTTATTTCAATCACCTGATCAATTATTCATAGAATGCTTATCCGAT 960
consensus_10836#1      ------------------------------------------------------------
                                                                                   

consensus_10836#0      GCTGTTGCGAGTGATTATGTTAATAAAGAGAAGACAAACGAACATTCGAATAATGATGTA 1020
consensus_10836#1      ------------------------------------------------------------
                                                                                   

consensus_10836#0      GAAGATAAATACAAGTCGAATCTCAGAAGACTACCTGCTGCAGACATTAAACTCGTAAAC 1080
consensus_10836#1      ------------------------------------------------------------
                                                                                   

consensus_10836#0      TCTTTGAGAGACGTTGTCTCGGATCGACTAGCAGTACGCTTGACGAATGACCCAGACTTT 1140
consensus_10836#1      ------------------------------------------------------------
                                                                                   

consensus_10836#0      GATACAGCACAATTCCCACTGTCTACTCAGAAATTTTTGAAACGAGATCCAAAGGCACGA 1200
consensus_10836#1      ------------------------------------------------------------
                                                                                   

consensus_10836#0      ATGTAACATAATTTAGGTGTGTGCAGGGATAACGTTCTAGCTTGTTTAAAATACTTTAGT 1260
consensus_10836#1      ------------------------------------------------------------
                                                                                   

consensus_10836#0      GGCATATAGCAGTGGCTATTATAATATATGGATTTCATACTATTTCAAGCAGGATCCAAA 1320
consensus_10836#1      ------------------------------------------------------------
                                                                                   

consensus_10836#0      TTTTATTGTGTATTGTCAGTTTCACAAGTATGTATGCTTACTTTTAGAATGTCAAAAACT 1380
consensus_10836#1      ------------------------------------------------------------
                                                                                   

consensus_10836#0      AACAGTATGATGTCAAGTTTTTTTTATGAACTTGTCACAGTTAATGGTTCGGGACGTTAT 1440
consensus_10836#1      ------------------------------------------------------------
                                                                                   

consensus_10836#0      GAACCTGTGTATGATGTTAACTGCCATAAAGTTTAATAAAAACACAAGTTTGGCAAAAAA 1500
consensus_10836#1      ------------------------------------------------------------
                                                                                   

consensus_10836#0      AAAAAAAAAAAAAAAAAAAAAAA 1523
consensus_10836#1      -----------------------
                                              




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)