cluster # 10838

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Schistosoma mansoni
cluster # 10838 cluster # 10838 Sequences # 23 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10838#0 length = 1775 sequences # 21

consensus_10838#1 length = 374 sequences # 1
consensus_10838#2 length = 297 sequences # 1

consensusID : consensus_10838#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 21
consensus length = 1775
fasta sequence

                              [TCGAGAGTCCTCGTTGCAAAATCAACCATCCCACCGTACGGACACCGGAAAAACTGGGTACCACGCAATCAGGAGGATTTTTTAGATGGAGGAGCATTCCCAGAAATACATGTTCCCCAATATCCTCTCGGGATGGGGCAGGAGAAAAATATTTCGAATGCTTTGGTTATAAAGACTGATAAAGATGGGAGAATCAGATATGATGAACTTGTTCGTCAAGGGCACAGCAAAGACAGGATCATCTATTCAAAGTTTTCAGACTTACTACCTAAACCGATTGATGATGACGATCCAGAATTCAACAAACCAAGTCAAGAAACTATCGAAGAGACAACA-G-AAAAAACACGTAAAGCTCTAGAATCACTGGTCGAAATGAAAGTTGCTGCTGCTGCACCTGTACGCCGAGCTGAGAAAACAAATCCTGCTGAATATATCCGTTATACA-CCATCACAACAAGGTGCTGCTTTTAATAGTGGAGCTAAACAACGCCTCGTCAGAATGGTGGAAATGCAGAAAGATCCCATGGAACCCCCTAAGTTCAAAATTAACCAGAAGATCCCTCGCGGGCCCCCTTCTCCCCCACCACCTCTGATGCATTCTCCGGCACGGAAAGTTACAGTTAAAGAACAACAAGACTGGAAAATCCCCCCATGTATTTCAAACTGGAAGAACCCCAGGGGATATACTATACCGTTAGACAAACGAGTTGCTGCAGATGGTCGTGGT-CTCCAAACAGTTCATATTAATGAGAACTTTGCGAAACTAGCAGAAGCACTTTATACGGCTGACAGAAAGGCTCGTGAGGCCGTAGAAATGAGAGCACAAATCGAAAGAAAAGTTGCTCAGAAAGAAAAGGAACGAAA-GGAGGAGCAACTCCAGAGGATCGCTCAGCAGGCTCGCGAATCTCGAGCAGGTCTTCGTCGTCCTGGCGCAACTGAAGGCGGAGACAATGATCCGGAACTAATGGACCGAGAAGAATTAAGACGTGATCGTGCACGAGACCGTGCTAGAGAAAGAAATCTT-GCTCGTTCTAATAATGAAGCCAAGGCTAAGATTGAAAAAGACAAAGAGCGAGACATCAGCGAACAAATCGCACTTGGACTTCCGAATCCACGGTTTAACTCAACAAACGAAAGCCTATTCGATCAAAGACTTTTCAATCAATCTAAGGGTCTAGACTCAGGTTTTGAGGGAGGTGCGGATGATTTATATAACATTTATGATAAGCCATGGAGAGGTGATTCTGAATTGGTAAATCATATATACCGCCCACGCCAAAAAGATACTGATGCATATGGGACAGACCTTGATGCACTTAAGAAGACTAAACGCTTTGTTCCTGACCGTGAATTTTCTGGAACTGATCATTCTCGTCGTTTGGATGGTCCAGTTCAATTTGAAAGAGACGAAGAAGATCCCTTTAATCTTAATAAATTCTTATCCAAAGTCAAGAAGGCCGAAAAACGCCCAGGTGAAGGTACCTCGGGAACAGACATCAGTAATCGTGACACTACTCATCGTAAAAGAGATCGAAAGGATTAAACCGCTCTAACTTTTATACTTTGTATATATTATTTATGGTGAAAAAATACTCAAAGTATTTTTTTGACTTTATTGATGAACTTCAGCTGCAAATTATGTGAATTTGTTACGCTTTCACTGAGGTTAATATACCTCTCTGTGTATGTAAAGCCAAATTAAATTAAATTGGATTTGTTACAGTACCTATTACTAGTGAATATATAATTGTTAAATGAAAAAAAAAAAAAATAAAA]

[-] EMBL BG931301             [TCGAGAGTCCTCGTTGCAAAATCAACCATCCCACCGTACGGACACCGGAAAAACTGGGTACCACGCAATCAGGAGGATTTTTTAGATGGAGGAGCATTCCCAGAAATACATGTTCCCCAATATCCTCTCGGGATGGGGCAGGAGAAAAATATTTCGAATGCTTTGGTTATAAAGACTGATAAAGATGGGAGAATCAGATATGATGAACTTGTTCGTCAAGGGCACAGCAAAGACAGGATCATCTATTCAAAGTTTTCAGACTTACTACCTAAACCGATTGATGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL BG931292             [TCGAGAGTCCTCGTTGCAAAATCAACCATCCCACCGTACGGACACCGGAAAAACTGGGTACCACGCAATCAGGAGGATTTTTTAGATGGAGGAGCATTCCCAGAAATACATGTTCCCCAATATCCTCTCGGGATGGGGCAGGAGAAAAATATTTCGAATGCTTTGGTTATAAAGACTGATAAAGATGGGAGAATCAGATATGATGAACTTGTTCGTCAAGGGCACAGCAAAGACAGGATCATCTATTCAAAGTTTTCAGACTTACTACCTAAACCGATTGATGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD184383             [                                                                GCAATCAGGAGGATTTTTTAGATGGAGGAGCATTCCCAGAAATACATGTTCCCCAATATCCTCTCGGGATGGGGCAGGAGAAAAATATTTCGAATGCTTTGGTTATAAAGACTGATAAAGATGGGAGAATCAGATATGATGAACTTGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD165056             [                                                                                                                                         GCAGGAGAAAAATATTTCGAATGCTTTGGTTATAAAGACTGATAAAGATGGGAGAATCAGATATGATGAACTTGTTCGTCAAGGGCACAGCAAAGACAGGATCATCTATTCAAAGTTTTCAGACTTACTACCTAAACCGATTGATGATGACGATCCAGAACTCAACAAACCAAGTCAAGAAACTATCGAAGAGACAACA G AAAAAACACGTAAAGCTCTAGAATCACTGGTCGAAATGAAAGTTGCTGCTGCTGCACCTGTACGCCGAGCTGAGAAAAC AATCCTGCTGAATATATCCGTTATACA CC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD113324             [                                                                                                                                                                                                                                            GATCATCTATTCAAAGTTTTCAGACTTACTACCTAAACCGATTGATGATGACGATCCAGAATTCAACAAACCAAGTCAAGAAACTATCGAAGAGACAACANGAAAAAAACACGTAAAGCTCTAGAATCACTGGTCGAAATGAAAGTTGCTGCTGCTGCACCTGTACGCCGAGCTGAGAAAACAAATCCTGCTGAATATATCCGTTATACA CCATCACAACAAGGTGCTGCTTTTAATAGTGGAGCTAAACAACGCCTCGTCAGAATGGTGGAAATGCAGAAAGATCCCATGGAACCCCCTAAGTTCAAAATTAACCAGAAGATCCCTCGCGGGCCCCCTTCTCCCCCACCACCTCTGATGCATTCTCCGGCACGGAAAGTTACAGTTAAAGAACAGCAAGACTGGAAAATCCCCCCATGTATTTCAAACTGGAAGAACCCCAGGGGATATACTATACCGTTAGACAAACGAGTTGCTGCAGATGGTCGTGGT CTCCAAACAGTTCATATTAATGAGAACTTTGCGAAACTAGCAGAAGCACTTTATACGGCTGACAGAAAGGCTCGTGAGGCCGTAGAAATGAGAGCACAAATCGAAAGAAAAG TGCTCAGANAGAAAAGGAACGAAAGGGAGGAGC ACTCCAGAGGATCGCTCAGCAGGCTCGCGAATCTCGAGCAGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD149169             [                                                                                                                                                                                                                                                  CTATTCAAAGTTTTCAGACTTACTACCTAAACCGATTGATGATGACGATCCACAATTCAACAAACCAAGTCAAGAAACTATCGAAGAGACAACA G AAAAAACACGTAAAGCTCTAAAATCACTGGTCGAAATGAAAGTTGCTGCTGCTGCACCTGTACGCCGAGCTGAGAAAACAAATCCTGCTGAATATATCCGTTATACA CCATCACAACAAGGTGCTGCTTTTAATAGTGGAGCTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD113401             [                                                                                                                                                                                                                                                                                                                                                             TAAAGCTCTATAATCACTGGTCGAAATGAAAGTTGCTGCTGCTGCACCTGTACGCCGAGCTGAGAAAACAAATCCTGCTGAATATATCCGTTATACA CCATCACAACAAGGTGCTGCTTTTAATAGTGGAGCTAAACAACGCCTGGTCAGAATGGTGGAAATGCAGAAAGATCCCATGGAACCCCCTAAGTTCAAAATTAACCAGAAGATCCCTCGCGGGCCCCCTTCTCCCCCACCACCTCTGATGCATTCTCCGGCACGGAAAGTTACAGTTAAAGAACAACAAGACTGGAAAATCCCCCCATGTATTTCAAACTGGAAGAACCCCATGGGATATACTATACCGTTAGACAAACGAGTTGCTGCAGATGGTCGTGGT CTCCAAACAGTTCATATTAATGAGAACTTTGCGAAACTAGCAGAAGCACTCTATACGGCTGACAGAAAGGCTCGTGAGGCCGTATGAATGAGAGCACAAATCGAAAGATAAGTTGCTCACAAAG AAAGGAACGAAA GGGAGAGCAACTCCAGAAGATCGCTCATCAGGCTCGCGGATCTCGAACACGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD182848             [                                                                                                                                                                                                                                                                                                                                                                                                                    CGAGCTGAGAAAACAAATCCTGCTGAATATATCCGTTAT CANCCATCACAACAAGGTGCTGCTTTTAATAGTGAAGCTAAACAACGCCTCGTCAGAATGGTGGAAATGCAGAAAGATCCCATGGAACCCCCTAAGTTCAAAATTAACCAGAAGATCCCTCGCGGGCCCCCTTCTCCCCCACCACCTCTGATGCATTCTCCGGCACGGAAAGTTACAGTTAAAGAACAACAAGACTGGAAAATCCCCCCATGTATTTCAAACTGGAAGAACCCTAGGGGATATACTATACCGTTAGACAAACGAGTTGCTGCAGATGGTCGTGGT CTCCAAACAGTTCATATTAATGAGAACTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD182748             [                                                                                                                                                                                                                                                                                                                                                                                                                    CGAGCTGAGAAAACAAATCCTGCTGAATATA CCGTTATACA CCATCACACAAAGGTGCTGCTTTTAATAGTGAAGCTAAACAACGCCTCGTCAGAATGGTGGAAATGCAGAAAGATCCCATGGAACCCCCTAAGTTCAAAATTAACCAGAAGATCCCTCGCGGGCCCCCTTCTCCCCCACCACCTCTGATGCATTCTCCGGCACGGAAAGTTACAGTTAAAGAACAACAAGACTGGAAAATCCCCCCATGTATTTCAAACTGGAAGAACCCTAGGGGATATACTATACCGTTAGACAAACGAGTTGCTGCAGATGGTCGTGGT CTCCAAACAGTTCATATTAATGAGAACTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD198025             [                                                                                                                                                                                                                                                                                                                                                                                                                               AACAAATCCTGCTGAATATATCCGTTATACA CCATCACAACAAGGTGCTGCTTTTAATAGTGGAGCTAAACAACGCCTCGTCAGAATGGTGGAAATGCAGAAAGATCCCATGGAACCCCCTAAGTTCAAAATTAACCAGAAGATCCCTCGCGGGCCCCCTTCTCCCCCACCACCTCTGATGCATTCTCCGGCACGGAAAGTTACAGTTAAAGAACAACAAGACTGGAAAATCCCCCCATGTATTTCAAACTGGAAGAACCCCAGGGGATATACTATACCGTTAGACAAACGAGTTGCTGCAGATGGTCGTGGT CTCCAAACAGTTCATATTAATGAGAACTTTGCGAAACTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD197993             [                                                                                                                                                                                                                                                                                                                                                                                                                               AACAAATCCTGCTGAATATATCCGTTATACA CCATCACAACAAGGTGCTGCTTTTAATAGTGGAGCTAAACAACGCCTCGTCAGAATGGTGGAAATGCAGAAAGATCCCATGGAACCCCCTAAGTTCAAAATTAACCAGAAGATCCCTCGCGGGCCCCCTTCTCCCCCACCACCTCTGATGCATTCTCCGGCACGGAAAGTTACAGTTAAAGAACAACAAGACTGGAAAATCCCCCCATGTATTTCAAACTGGAAGAACCCCAGGGGATATACTATACCGTTAGACAAACGAGTTGCTGCAGATGGTCGTGGTCCTCC AACAGTTCATATTAATGAGAACTTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD112139             [                                                                                                                                                                                                                                                                                                                                                                                                                                       CTGCTGAATATATCCGTTATACA CCATCACAACAAGGTGCTGCTTTTAATAGTGGAGCTAAACAACGCCTCGTCAGAATGGTGGAAATGCAGAAAGATCCCATGGAACCCCCTAAGTTCAAAATTAACCAGAAGATCCCTCGCGGGCCCCCTTCTCCCCCACCACCTCTGATGCATTCTCCGGCACGGAAAGTTACAGTTAAAGAACAACAAGACTGGAAAATCCCCCCATGTATTTCAAACTGGAAGAACCCCAGGGGATATACTATACCGTTAGACAAACGAGTTGCTGCAGATGGTCGTGGT CTCCAAACAGTTCATATTAATGAGAACTTTGCGAAACTAGCAGAAGCACTTTATACGGCTGACAGAAAGGCTCGTGAGGCCGTAGAAATGAGAGCACAAATCGAAAGAAAAGTTGCTCAGAAAGAAAAGGAACGAAA GGAGGAGCAACTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AW017047             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GCCTCGTCAGAATGGTGGAAATGCAGAAAGATCCCATGGAACCCCCTAAGTTCAAAATTAACCAGAAGATCCCTCGCGGGCCCCCTTCTCCCCCACCACCTCTGATGCATTCTCCGGCACGGAAAGTTACAGTTAAAGAACAACAAGACTGGAAAATCCCCCCATGTATTTCAAACTGGAAGAACCCCAGGGGATATACTATACCGTTAGACAAACGAGTTGCTGCAGATGGTCGTGGT CTCCAAACAGTTCATATTAATGAGAACTTTGCGAAACTAGCAGAAGCACTTTATACGGCTGACAGAAAGGCTCGTGAGGCCGTAGAAATGAGAGCACAAATCGAAAGAAAAGTTGCTCAGAAAGAAAAGGAACGAAA GGAGGAGCAACTCCAGAGGATCGCTCAGCAGGCTCGCGAATCTCGAGCAGGTCTTCGTCGTCCTGGCGCAACTGAAGGCGGAGACAATGATCCGGAACTAATGGACCGAGAAGAATTAAGACGTGATCGTGCACGAGACCGTGCTAGAGAAAGAAATCTT GCTCGTTCTAATAATGAAGCCAAAGCTAAGATTGAAAAAGACAAAGAGCGAGACATCAGCGAACAAATCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD198031             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GTTAAAGAACAACAAGACTGGAAAATCCCCCCATGTATTTCAAACTGGAAGAANCCTAGGGGATATACTATACCGTTAGACAAACGAGTTGCTGCAGATGGTCGTGGT CTCCAAACAGTTCATATTAATGAGAACTTTGCGAAACTAGCAGAAGCACTTTATACGGCTGACAGAAAGGCTCGTGAGGCCGTAGAAATGAGAGCACAAATCGAAAGAAAAGTTGCTCAGAAAGAAAAGGAACGAAA GGAGGAGCAACTCCAGAGGATCGCTCAGCAGGCTCGCGAATCTCGAGCAGGTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD078133             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              agGGAAAATCCCCCCATGTATTTCAAACTGGAAGAACCCCAGGGGATATACTATACCGTTAGACAAACGAGTTGCTGCAGATGGTCGTGGT CTCCAAACAGTTCATATTAATGAGAACTTTGCGAAACTAGCAGAAGCACTTTATACGGCTGACAGAAAGGCTCGTGAGGCCGTAGAAATGAGAGCACAAATCGAAAGAAAAGTTGCTTAGAAAGAAAAGGAACGAAA GGAGGAGCAACTCCAGAGGATCGCTCAGCAGGCTCGCGAATCTCGAGCAGGTCTTCGTCGTCCTGGCGCAACTGAAGGCGGAGACAATGATCCGGAACTAATGGACCGAGAAG ATTAAGACGTGATCGTGCACGAGACCGTGCTAGAGAAAGAAATCTTGGCTCG TCTAATAATGAAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD195655             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AGCACTTTATACGGCTGACAGAAAGGCTCGTGAGGCCGTAGAAATGAGAGCACAAATCGAAAGAAAAGTTGCTCAGAAAGAAAAGGAACGAAA GGAGGAGCAACTCCAGAGGATCGCTCAGCAGGCTCGCGAATCTCGAGCAGGTCTTCGTCGTCCTGGCGCAACTGAAGGCGGAGACAATGATCCGGAACTAATGGACCGAGAAGAATTAAGACGTGATCGTGCACGAGACCGTGCTAGAGAAAGAAATCTT GCTCGTTCTAATAATGAAGCCAAGGCTAAGATTGAAAAAGACAAAGAACGAGACATCAGCGAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD171575             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GTAGAAATGAGAGCACAAATCGAAAGAAAAGTTGCTCAGAAAGAAAAGGAACGAAA GGAGGAGCAACTCCAGAGGATCGCTCAGCAGGCTCGCGAATCTCGAGCAGGTCTTCGTCGTCCTGGCGCAACTGAAGGCGGAGACAATGATCCGGAACTAATGGACCGAGAAGAATTAAGACGTGATCGTGCACGAGACCGTGCTAGAGAAAGAAATCTT GCTCGTTCTAATAATGAAGCCAAGGCTAAGATTGAAAAAGACAAAGAGCGAGACATCAGCGAACAAATCGCACTTGGACTTCCGAATCCACGGTTTAACTCAACAAACGAAAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD120773             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TAATAATGAAGCCAAGGCTAAGATTGAAAAAGACAAAGAGCGAGACATCAGCGAACAAATCGCACTTGGACTTCCGAATCCACGGTTTAACTCAACAAACGAAAGCCTATTCGATCAAAGACTTTTCAATCAATCTAAGGGTCTAGACTCAGGTTTTGAGGGAGGTGCGGATGATTTATATAACATTTATGATAAGCCATGGAGAGGTGATTCTGAATTGGTAAATCATATATACCGCCCACGCCAAAAAGATACTGATGCATATGGGACAGACCTTGATGCACTTAAGAAGACTAAACGCTTTGTTCCTGACCGTGAATTTTCTGGAACTGATCATTCTCGTCGTTTGGATGGTCCAGTTCAATTTGAAAGAGACGAAGAAGATCCCTTTAATCTTAATAAATTCTTATCCAAAGTCAAGAAGGCCGAAAAACGCCCAGGTGAAGGTACCTCGGGAACAGACATCAGTAATCGTGACACTACTCATCGTAAAAGAGATCGAAAGGATTAAACCGCTCTAACTTTTATACTTTGTATATATTATTTATGGTGAAAAAATACTCAAAGTATTTTTTTG                                                                                                                                                                       ]
[+] EMBL CD077359             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   cgaggTCAACAAACGAAAGCCTATTCGATCAAAGACTTTTCAATCAATCTAAGGGTCTAGACTCAGGTTTTGAGGGAGGTGCGGATGATTTATATAACATTTATGATAAGCCATGGAGAGGTGATTCTGAATTGGTAAATCATATATACCGCCCACGCCAAAAAGATACTGATGCATATGGGACAGACCTTGATGCACTTAAGAAGACTAAACGCTTTGTTCCTGACCGTGAATTTTCTGGAACTGATCATTCTCGTCGTTTGGATGGTCCAGTTCAATTTGAAAGAGACGAAGAAGATCCCTTTAATCTTAGTAAATTCTTATCCAAAGTCAAGAAGGCCGAAAAACGCCCAGGTGAAGGTACCTCGGGAACAGACATCAGTAATCGTGACACTACTCATCGTAAAAGAGATCGAAAGGATTAAACCGCTCTAACTTTTATACTTTGTATATATTATTTATGGTGAAAAAATACTCAAAGTATTTTTTTGACTTTATTGATGAA                                                                                                                                                         ]
[-] EMBL CD120776             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AACAAACGAGAGCCTAATCGATCAAAGACTTTTCAATCAATCTAAGGGTCTAGACTCAGGTTTTGAGGGAGGTGCGGATGATTTATATAACATTTATGATAAGCCATGGAGAGGTGATTCTGAATTGGTAAATCATATATACCGCCCACGCCAAAAAGATACTGATGCATATGGGACAGACCTTGATGCACTTAAGAAGACTAAACGCTTTGTTCCTGACCGTGAATTTTCTGGAACTGATCATTCTCGTCGTTTGGATGGTCCAGTTCAATTTGAAAGAGACGAAGAAGATCCCTTTAATCTTAATAAATTCTTATCCAAAGTCAAGAAGGCCGAAAAACGCCCAGGTGAAGGTACCTCGGGAACAGACATCAGTAATCGTGACACTACTCATCGTAAAAGAGATCGAAAGGATTAAACCGCTCTAACTTTTATACTTTGTATATATTATTTATGGTGAAAAAATACTCAAAGTATTTTTTTG                                                                                                                                                                       ]
[-] EMBL AI394842             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AATCTTTTATACCGCCCAAGCCAAAAAGATACTGATGCATATGGGACAGACCTTGATGCACTTAAGAAGACTAAACGCTTTGTTCCTGACC TGAATTTTCTGGAACTGATCATTCTCGTCGTTTGGATGGTCCAGTTCAATTTGAAAGAGACGAAGAAGATCCCTTTAATCTTAGTAAATTCTTATCCAAAGTCAAGAAGGCCGAAAAACGCCCAGGTGAAGGTACCTCGGGAACAGACATCAGTAATCGTGACACTACTCATCGTAAAAGAGATCGAAAGGATTAAACCGCTCTAACTTTTATACTTTGTATATATTATTTATGGTGAAAAAATACTCAAAGTATTTTTTTGACTTTATTGATGAACTTCAGCTGCAAATTATGTGAATTTGTTACGCTTTCACTGAGGTTAATATACCTCTCTGTGTATGTAAAGCCAAATTAAATTAAATTGGATTTGTTACAGTACCTATTACTAGTGAATATATAATTGTTAAATGAAAAAAAAAAAAAATAAAA]




>consensus_10838#0
TCGAGAGTCCTCGTTGCAAAATCAACCATCCCACCGTACGGACACCGGAAAAACTGGGTA
CCACGCAATCAGGAGGATTTTTTAGATGGAGGAGCATTCCCAGAAATACATGTTCCCCAA
TATCCTCTCGGGATGGGGCAGGAGAAAAATATTTCGAATGCTTTGGTTATAAAGACTGAT
AAAGATGGGAGAATCAGATATGATGAACTTGTTCGTCAAGGGCACAGCAAAGACAGGATC
ATCTATTCAAAGTTTTCAGACTTACTACCTAAACCGATTGATGATGACGATCCAGAATTC
AACAAACCAAGTCAAGAAACTATCGAAGAGACAACAGAAAAAACACGTAAAGCTCTAGAA
TCACTGGTCGAAATGAAAGTTGCTGCTGCTGCACCTGTACGCCGAGCTGAGAAAACAAAT
CCTGCTGAATATATCCGTTATACACCATCACAACAAGGTGCTGCTTTTAATAGTGGAGCT
AAACAACGCCTCGTCAGAATGGTGGAAATGCAGAAAGATCCCATGGAACCCCCTAAGTTC
AAAATTAACCAGAAGATCCCTCGCGGGCCCCCTTCTCCCCCACCACCTCTGATGCATTCT
CCGGCACGGAAAGTTACAGTTAAAGAACAACAAGACTGGAAAATCCCCCCATGTATTTCA
AACTGGAAGAACCCCAGGGGATATACTATACCGTTAGACAAACGAGTTGCTGCAGATGGT
CGTGGTCTCCAAACAGTTCATATTAATGAGAACTTTGCGAAACTAGCAGAAGCACTTTAT
ACGGCTGACAGAAAGGCTCGTGAGGCCGTAGAAATGAGAGCACAAATCGAAAGAAAAGTT
GCTCAGAAAGAAAAGGAACGAAAGGAGGAGCAACTCCAGAGGATCGCTCAGCAGGCTCGC
GAATCTCGAGCAGGTCTTCGTCGTCCTGGCGCAACTGAAGGCGGAGACAATGATCCGGAA
CTAATGGACCGAGAAGAATTAAGACGTGATCGTGCACGAGACCGTGCTAGAGAAAGAAAT
CTTGCTCGTTCTAATAATGAAGCCAAGGCTAAGATTGAAAAAGACAAAGAGCGAGACATC
AGCGAACAAATCGCACTTGGACTTCCGAATCCACGGTTTAACTCAACAAACGAAAGCCTA
TTCGATCAAAGACTTTTCAATCAATCTAAGGGTCTAGACTCAGGTTTTGAGGGAGGTGCG
GATGATTTATATAACATTTATGATAAGCCATGGAGAGGTGATTCTGAATTGGTAAATCAT
ATATACCGCCCACGCCAAAAAGATACTGATGCATATGGGACAGACCTTGATGCACTTAAG
AAGACTAAACGCTTTGTTCCTGACCGTGAATTTTCTGGAACTGATCATTCTCGTCGTTTG
GATGGTCCAGTTCAATTTGAAAGAGACGAAGAAGATCCCTTTAATCTTAATAAATTCTTA
TCCAAAGTCAAGAAGGCCGAAAAACGCCCAGGTGAAGGTACCTCGGGAACAGACATCAGT
AATCGTGACACTACTCATCGTAAAAGAGATCGAAAGGATTAAACCGCTCTAACTTTTATA
CTTTGTATATATTATTTATGGTGAAAAAATACTCAAAGTATTTTTTTGACTTTATTGATG
AACTTCAGCTGCAAATTATGTGAATTTGTTACGCTTTCACTGAGGTTAATATACCTCTCT
GTGTATGTAAAGCCAAATTAAATTAAATTGGATTTGTTACAGTACCTATTACTAGTGAAT
ATATAATTGTTAAATGAAAAAAAAAAAAAATAAAA

consensusID : consensus_10838#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 374
fasta sequence

                              [TTTGGTTATAAAGACTGATAAAGATGGGAGAATCAGATATGATGAACTTGTTCGTCAAGGGCACAGCAAAGACAGGATCATCTATTCAAAGTTTTCAGACTTACTACCTAAACCGATTGATGATGACGATCCAGAATTCAACAAACCAAGTCAAGAAACTATCGAAGAGGTAGATGTTCTATTTTTGTTGATTTTGCTAGACAACAGAAAAAACACGTAAAGCTCTAGAATCACTGGTCGAAATGAAAGTTGCTGCTGCTGCACCTGTACGCCGAGCTGAGAAAACAAATCCTGCTGAATATATCCGTTATACACCATCACAACAAGGTGCTGCTTTTAATAGTGGAGCTAAACAACGCCTCGTCAGAATGGTG]

[+] EMBL CD184283             [TTTGGTTATAAAGACTGATAAAGATGGGAGAATCAGATATGATGAACTTGTTCGTCAAGGGCACAGCAAAGACAGGATCATCTATTCAAAGTTTTCAGACTTACTACCTAAACCGATTGATGATGACGATCCAGAATTCAACAAACCAAGTCAAGAAACTATCGAAGAGGTAGATGTTCTATTTTTGTTGATTTTGCTAGACAACAGAAAAAACACGTAAAGCTCTAGAATCACTGGTCGAAATGAAAGTTGCTGCTGCTGCACCTGTACGCCGAGCTGAGAAAACAAATCCTGCTGAATATATCCGTTATACACCATCACAACAAGGTGCTGCTTTTAATAGTGGAGCTAAACAACGCCTCGTCAGAATGGTG]




>consensus_10838#1
TTTGGTTATAAAGACTGATAAAGATGGGAGAATCAGATATGATGAACTTGTTCGTCAAGG
GCACAGCAAAGACAGGATCATCTATTCAAAGTTTTCAGACTTACTACCTAAACCGATTGA
TGATGACGATCCAGAATTCAACAAACCAAGTCAAGAAACTATCGAAGAGGTAGATGTTCT
ATTTTTGTTGATTTTGCTAGACAACAGAAAAAACACGTAAAGCTCTAGAATCACTGGTCG
AAATGAAAGTTGCTGCTGCTGCACCTGTACGCCGAGCTGAGAAAACAAATCCTGCTGAAT
ATATCCGTTATACACCATCACAACAAGGTGCTGCTTTTAATAGTGGAGCTAAACAACGCC
TCGTCAGAATGGTG

consensusID : consensus_10838#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 297
fasta sequence

                              [CAAATTCAGGAAGCCCGAAAACCCCCCAGTTGAAGTTCCTGCGGGAACAGACATCAGTATTCGTGACACTACTCATCGTAAAAGAGATCGAAAGGATTAAACCGCTCTAACTTTTATACTTTGTATATATTATTTATGGTGAAAAAATACTCAAAGTATTTTTTTGACTTTATTGATGAACTTCAGCTGCAAATTATGTGAATTTGTTACGCTTTCACTGAGGTTAATATACCTCTCTGTGTATGTAAAGCCAAATTAAATTAAATTGGATTTGTTACAGTAAAAAAAAAAAAAAAA]

[-] EMBL AI394942             [CAAATTCAGGAAGCCCGAAAACCCCCCAGTTGAAGTTCCTGCGGGAACAGACATCAGTATTCGTGACACTACTCATCGTAAAAGAGATCGAAAGGATTAAACCGCTCTAACTTTTATACTTTGTATATATTATTTATGGTGAAAAAATACTCAAAGTATTTTTTTGACTTTATTGATGAACTTCAGCTGCAAATTATGTGAATTTGTTACGCTTTCACTGAGGTTAATATACCTCTCTGTGTATGTAAAGCCAAATTAAATTAAATTGGATTTGTTACAGTAAAAAAAAAAAAAAAA]




>consensus_10838#2
CAAATTCAGGAAGCCCGAAAACCCCCCAGTTGAAGTTCCTGCGGGAACAGACATCAGTAT
TCGTGACACTACTCATCGTAAAAGAGATCGAAAGGATTAAACCGCTCTAACTTTTATACT
TTGTATATATTATTTATGGTGAAAAAATACTCAAAGTATTTTTTTGACTTTATTGATGAA
CTTCAGCTGCAAATTATGTGAATTTGTTACGCTTTCACTGAGGTTAATATACCTCTCTGT
GTATGTAAAGCCAAATTAAATTAAATTGGATTTGTTACAGTAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10838#0      TCGAGAGTCCTCGTTGCAAAATCAACCATCCCACCGTACGGACACCGGAAAAACTGGGTA 60
consensus_10838#1      ------------------------------------------------------------
consensus_10838#2      ------------------------------------------------------------
                                                                                   

consensus_10838#0      CCACGCAATCAGGAGGATTTTTTAGATGGAGGAGCATTCCCAGAAATACATGTTCCCCAA 120
consensus_10838#1      ------------------------------------------------------------
consensus_10838#2      ------------------------------------------------------------
                                                                                   

consensus_10838#0      TATCCTCTCGGGATGGGGCAGGAGAAAAATATTTCGAATGCTTTGGTTATAAAGACTGAT 180
consensus_10838#1      -----------------------------------------TTTGGTTATAAAGACTGAT 19
consensus_10838#2      ---------------------------------------------------CAAATTCAG 9
                                                                           * * * * 

consensus_10838#0      AAAGATGGGAGAATCAG-ATATGATGAACTTGTTCGTCAAGGGCACAGCAAAGACAGGAT 239
consensus_10838#1      AAAGATGGGAGAATCAG-ATATGATGAACTTGTTCGTCAAGGGCACAGCAAAGACAGGAT 78
consensus_10838#2      GAAGCCCGAAAACCCCCCAGTTGAAGTTCCTGCGGGAACAGACATCAGTATTCGTGACAC 69
                        ***   * * *  *   *  *** *  * **   *   **    *** *        * 

consensus_10838#0      CATCTAT--TCAAAGTTTTCAGACTTACTACCTAAACCGATTGATGATGACGATCCAGAA 297
consensus_10838#1      CATCTAT--TCAAAGTTTTCAGACTTACTACCTAAACCGATTGATGATGACGATCCAGAA 136
consensus_10838#2      TACTCATCGTAAAAGAGATCGAAAGGATTA----AACCGCTCTAACTTTTATACTTTGTA 125
                        *   **  * ****   **  *   * **    ***** *  *   *    *    * *

consensus_10838#0      TTCAACAAACCAAGTCAAGAAACTATCGAAGAG--------------------------- 330
consensus_10838#1      TTCAACAAACCAAGTCAAGAAACTATCGAAGAGGTAGATGTTCTATTTTTGTTGATTTTG 196
consensus_10838#2      TATATTATTTATGGTGAAAAAATACTCAAAGTA-------------TTTTTTTGACTTTA 172
                       *  *  *      ** ** ***   ** ***                             

consensus_10838#0      ----ACAACAGAAAAAACACGTAAAGCTCTAGAATCACTG-GTCGAAATGAAAGTTGCTG 385
consensus_10838#1      CTAGACAACAGAAAAAACACGTAAAGCTCTAGAATCACTG-GTCGAAATGAAAGTTGCTG 255
consensus_10838#2      TTGATGAACTTCAGCTGCAAATTA---TGTGAATTTGTTACGCTTTCACTGAGGTTAATA 229
                             ***   *    **  * *   * *  * *   *  *     *   * ***  * 

consensus_10838#0      CTGCTGCACCTGTACGCCGAGCTGAGAAAACAAATCCTGCTGAATATATCCGTTATACAC 445
consensus_10838#1      CTGCTGCACCTGTACGCCGAGCTGAGAAAACAAATCCTGCTGAATATATCCGTTATACAC 315
consensus_10838#2      TACCTCTCTGTGTATGTAAAGCC---AAATTAAATTAAATTGGATTTGTT-ACAGTAAAA 285
                          **     **** *   ***    ***  ****     ** ** * *      ** * 

consensus_10838#0      CATCACAACAAGGTGCTGCTTTTAATAGTGGAGCTAAACAACGCCTCGTCAGAATGGTGG 505
consensus_10838#1      CATCACAACAAGGTGCTGCTTTTAATAGTGGAGCTAAACAACGCCTCGTCAGAATGGTG- 374
consensus_10838#2      AAAAAAAAAAAA------------------------------------------------ 297
                        *  * ** **                                                 

consensus_10838#0      AAATGCAGAAAGATCCCATGGAACCCCCTAAGTTCAAAATTAACCAGAAGATCCCTCGCG 565
consensus_10838#1      ------------------------------------------------------------
consensus_10838#2      ------------------------------------------------------------
                                                                                   

consensus_10838#0      GGCCCCCTTCTCCCCCACCACCTCTGATGCATTCTCCGGCACGGAAAGTTACAGTTAAAG 625
consensus_10838#1      ------------------------------------------------------------
consensus_10838#2      ------------------------------------------------------------
                                                                                   

consensus_10838#0      AACAACAAGACTGGAAAATCCCCCCATGTATTTCAAACTGGAAGAACCCCAGGGGATATA 685
consensus_10838#1      ------------------------------------------------------------
consensus_10838#2      ------------------------------------------------------------
                                                                                   

consensus_10838#0      CTATACCGTTAGACAAACGAGTTGCTGCAGATGGTCGTGGTCTCCAAACAGTTCATATTA 745
consensus_10838#1      ------------------------------------------------------------
consensus_10838#2      ------------------------------------------------------------
                                                                                   

consensus_10838#0      ATGAGAACTTTGCGAAACTAGCAGAAGCACTTTATACGGCTGACAGAAAGGCTCGTGAGG 805
consensus_10838#1      ------------------------------------------------------------
consensus_10838#2      ------------------------------------------------------------
                                                                                   

consensus_10838#0      CCGTAGAAATGAGAGCACAAATCGAAAGAAAAGTTGCTCAGAAAGAAAAGGAACGAAAGG 865
consensus_10838#1      ------------------------------------------------------------
consensus_10838#2      ------------------------------------------------------------
                                                                                   

consensus_10838#0      AGGAGCAACTCCAGAGGATCGCTCAGCAGGCTCGCGAATCTCGAGCAGGTCTTCGTCGTC 925
consensus_10838#1      ------------------------------------------------------------
consensus_10838#2      ------------------------------------------------------------
                                                                                   

consensus_10838#0      CTGGCGCAACTGAAGGCGGAGACAATGATCCGGAACTAATGGACCGAGAAGAATTAAGAC 985
consensus_10838#1      ------------------------------------------------------------
consensus_10838#2      ------------------------------------------------------------
                                                                                   

consensus_10838#0      GTGATCGTGCACGAGACCGTGCTAGAGAAAGAAATCTTGCTCGTTCTAATAATGAAGCCA 1045
consensus_10838#1      ------------------------------------------------------------
consensus_10838#2      ------------------------------------------------------------
                                                                                   

consensus_10838#0      AGGCTAAGATTGAAAAAGACAAAGAGCGAGACATCAGCGAACAAATCGCACTTGGACTTC 1105
consensus_10838#1      ------------------------------------------------------------
consensus_10838#2      ------------------------------------------------------------
                                                                                   

consensus_10838#0      CGAATCCACGGTTTAACTCAACAAACGAAAGCCTATTCGATCAAAGACTTTTCAATCAAT 1165
consensus_10838#1      ------------------------------------------------------------
consensus_10838#2      ------------------------------------------------------------
                                                                                   

consensus_10838#0      CTAAGGGTCTAGACTCAGGTTTTGAGGGAGGTGCGGATGATTTATATAACATTTATGATA 1225
consensus_10838#1      ------------------------------------------------------------
consensus_10838#2      ------------------------------------------------------------
                                                                                   

consensus_10838#0      AGCCATGGAGAGGTGATTCTGAATTGGTAAATCATATATACCGCCCACGCCAAAAAGATA 1285
consensus_10838#1      ------------------------------------------------------------
consensus_10838#2      ------------------------------------------------------------
                                                                                   

consensus_10838#0      CTGATGCATATGGGACAGACCTTGATGCACTTAAGAAGACTAAACGCTTTGTTCCTGACC 1345
consensus_10838#1      ------------------------------------------------------------
consensus_10838#2      ------------------------------------------------------------
                                                                                   

consensus_10838#0      GTGAATTTTCTGGAACTGATCATTCTCGTCGTTTGGATGGTCCAGTTCAATTTGAAAGAG 1405
consensus_10838#1      ------------------------------------------------------------
consensus_10838#2      ------------------------------------------------------------
                                                                                   

consensus_10838#0      ACGAAGAAGATCCCTTTAATCTTAATAAATTCTTATCCAAAGTCAAGAAGGCCGAAAAAC 1465
consensus_10838#1      ------------------------------------------------------------
consensus_10838#2      ------------------------------------------------------------
                                                                                   

consensus_10838#0      GCCCAGGTGAAGGTACCTCGGGAACAGACATCAGTAATCGTGACACTACTCATCGTAAAA 1525
consensus_10838#1      ------------------------------------------------------------
consensus_10838#2      ------------------------------------------------------------
                                                                                   

consensus_10838#0      GAGATCGAAAGGATTAAACCGCTCTAACTTTTATACTTTGTATATATTATTTATGGTGAA 1585
consensus_10838#1      ------------------------------------------------------------
consensus_10838#2      ------------------------------------------------------------
                                                                                   

consensus_10838#0      AAAATACTCAAAGTATTTTTTTGACTTTATTGATGAACTTCAGCTGCAAATTATGTGAAT 1645
consensus_10838#1      ------------------------------------------------------------
consensus_10838#2      ------------------------------------------------------------
                                                                                   

consensus_10838#0      TTGTTACGCTTTCACTGAGGTTAATATACCTCTCTGTGTATGTAAAGCCAAATTAAATTA 1705
consensus_10838#1      ------------------------------------------------------------
consensus_10838#2      ------------------------------------------------------------
                                                                                   

consensus_10838#0      AATTGGATTTGTTACAGTACCTATTACTAGTGAATATATAATTGTTAAATGAAAAAAAAA 1765
consensus_10838#1      ------------------------------------------------------------
consensus_10838#2      ------------------------------------------------------------
                                                                                   

consensus_10838#0      AAAAATAAAA 1775
consensus_10838#1      ----------
consensus_10838#2      ----------