cluster # 10843

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 10843 cluster # 10843 Sequences # 23 consensus # 8

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10843#0 length = 1102 sequences # 9
consensus_10843#1 length = 772 sequences # 2
consensus_10843#2 length = 500 sequences # 1
consensus_10843#3 length = 497 sequences # 6

consensus_10843#4 length = 467 sequences # 1
consensus_10843#5 length = 412 sequences # 2
consensus_10843#6 length = 229 sequences # 1
consensus_10843#7 length = 148 sequences # 1

consensusID : consensus_10843#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1102
fasta sequence

                              [CGAGGCGCGGTCCTGTTTGGGAGTCCATTTCGTCCACCTCATACATTCTGATTAAGTAACCAGTAATTATGGTCCTGCACTTTAAGTGTGAACTTGTTCAGCCTCCTTATTTTATTTACATGGGAGAAGATAAACATGAAAATGATGAGCTTATTCGTTGGGGATGGCCAGAGGACGTTTGGTTTCATGTAGATGCTCTATCATCTGCTCATGTTTACCTACGACTGAAGGAAGGGGAAACTTTAGATGATGTCCCCGCTGCCGTTATACAGGACTGTGCACAACTAGTCAAGGAAAACAGCATCCAAGGTTGCAAACTTAACGATGTCACTGTTGTATATACCAAATGGGAGAACCTGAAAAAAACCAATGATATGGATGCTGGCCAAGTCTCCTTTCACAATAATAAAGCAGTTC-AAAAGATCG-TAGTTGAAAAACGCAATGGAGATGT-AATAAAACGACTCAATAAAACAAAAGAGCAATGCCAACATCCTGATTTAAGAGGTGAGAGAGAGAAGCGAGATACTCGCATTAAAAACAAAGAAAAAGCTGCTCTGGCTGCTAAGAAAAAGTCAGAACTTGAGGCACAGAAAGTCCGTGCAGCGGAAGCA-GAAAAAAGATCCTACGATCGTCTGTTTGTTGAGAGTAAGATGAGAACAAATGAAGATGGCTATGATTCGGATGATTTTATGTAAAAAAGAAATATGAGTACCTCCCTACATCTAAAGGTGTCTCATCTCTTAACTTTATTTCCTACTTATCGGTTACTTTTTCTGAATTGTTGATCGTTTCATCTGTAATAAAAACCATTTTGGTTTACTTGTATATATTATAATGTAAATTTTCTTTGCGATTCTATGTTTGATGAGACTGCTCCGGATGCTAACTTTCCATACATAAACGATATAATTGAGATTATGGACCAATCAGTGTTAGATCACGATTGAAAACCTGAAAGCATTTCTGAAGAGTCTTTAACTAGGATAAAACGGTCGTCCAGTGCTTCCACGCTTCATTGACGGTCTAACATTGATCGGTTTATGATCTCAATTGAAACTCAACCATCTCCACAACCCTATTCTAATAAACAATATAATTTAAT]

[+] EMBL CD083575             [CGAGGCGCGGTCCTGTTTGGGAGTCCATTTCGTCCACCTCATACATTCTGATTAAGTAACCAGTAATTATGGTCCTGCACTTTAAGTGTGAACTTGTTCAGCCTCCTTATTTTATTTACATGGGAGAAGATAAACATGAAAATGATGAGCTTATTCGTTGGGGATGGCCAGAGGACGTTTGGTTTCATGTAGATGCTCTATCATCTGCTCATGTTTACCTACGACTGAAGGAAGGGGAAACTTTAGATGATGTCCCCGCTGCCGTTATACAGGACTGTGCACAACTAGTCAAGGAAAACAGCATCCAAGGTTGCAAACTTAACGATGTCACTGTTGTATATACCAAATGGGAGAACCTGAAAAAAACCAATGATATGGATGCTGGCCAAGTCTCCTTTCACAATAATAAAGCAGTTC AAAAGATCG TAGTTGAAAAACGCAATGGAGATGT AATAAAACGACTCAATAAAACAAAAGAGCAATGCCAACATCCTGATTTAAGAGGTGAGAGAGAGAAGCGAGATACTCGCATTAAAAACAAAGAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AI618807             [                                        ATACATTCTGATTAAGTAACCAGTAATTATGGTCCTGCACTTTAAGTGTGAACTTGTTCAGCCTCCTTATTTTATTTACATGGGAGAAGATAAACATGAAAATGATGAGCTTATTCGTTGGGGATGGCCAGAGNACGTTTGGTTTCATGTAGATGCTCTATCATCTGCTCATGTTTACCTACCACTGAAGGAAGGGGAAACTTTAGATGATGTCCCCGCTGCCGTTATACAGGACTGTGCACAACTAGTCAAGGAAAACAGCATCCAAGGTTGCAAACTTAACGATGTCACTGGTGTATATACC AATGGGAGAACCTGTAAAAAACC ATGATATGGATGCTGGCCAAGTCTCCTTTCACAATAATAAAGCAGTTC AAAAAATCGTTAGTTG AAAACGC ATGGAGATGT  AT AAACGACTC ATAAAAC AAAGAGGCATGCC ACATCCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD131197             [                                                                                                                                                                                       TTCATGTAGATGCTCTATCATCTGTTCATGTTAACCTACGACTGAAGGAAGGGGAAACTTTAGATGATGTCCCCGCTGCCGTTATACAGGACTGTGCACAACTAGTCAAGGAAAACAGCATCCAAGGTTGCAAACTTAACGATGTCACTGTTGTATATACCAAATGGGAGAACCTGAAAAAAACCAATGATATGGATGCTGGCCAAGTCTCCTTTCACAATAATAAAGCAGTTC AAAGGATCG TAGTTGAAAAACGCAATGGAGATGT AATAAAACGACTCAATAAAACAAAAGAGCAATGCCAACATCCTGATTTAAGAGGTGAGAGAGAGAAGCGAGATACTCGCATTAAAAACAAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD077289             [                                                                                                                                                                                                                                                                                      GCACAACTAGTCAAGGAAAACAGCATCCAAGGTTGCAAACTTAACGATGTCACTGTTGTATATACCAAATGGGAGAACCTGAAAAAAACCAATGATATGGATGCTGGCCAAGTCTCCTTTCACAATAATAAAGCAGTTC AAAAGATCG TAGTTGAAAAACGCAATGGAGATGT AATAAAACGACTCAATAAAACAAAAGAGCAATGCCAACATCCTGATTTAAGAGGTGAGAGAGAGAAGCGAGATACTCGCATTAAAAACAAAGAAAAAGCTGCTCTGGCTGCTAAGAAAAAGTCAGAACTTGAGGCACAGAAAGTCCGTGCAGCGGAAGCA GAAAAAAGATCCTACGATCGTCTGTTTGTTGAGAGTAAGATGAGAACAAATGAAGATGGCTATGATTCGGATGATTTTATGTAAAAAAGAAATATGAGTACCTCCCTACATCTAAAGGTGTCTCATCTCTTAACTTTATTTCCTACTTATCGGTTACTTTTTCTGAATTGTTGATCGTTTCATCTGTAATAAAAACCA                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD140016             [                                                                                                                                                                                                                                                                                                                                                                                                                         AGCAGTTCAAAAAGATCG TAGTTGAAAAACGCAATGGAGATGT AATAAAACGACTCAATAAAACAAAAGAGCAATGCCAACATCCTGATTTAAGAGGTGAGAGAGAGAAGCGAGATACTCGCATTAAAAACAAAGAAAAAGCTGCTCTGGCTGCTAAGAAAAAGTCAGAACTTGAGGCACAGAAAGTCCGTGCAGCGGAAGCA GAAAAAAGATCCTACGATCGTCTGTTTGTTGAGAGTAAGATGAGAACAAATGAAGATGGCTATGATTCGGATGATTTTATGTAAAAAAGAAATATGAGTACCTCCCTACATCTAAAGGTGTCTCATCTCTTAACTTTATTTCCTACTTATCGGTTACTTTTTCTGAAaagtga                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD142252             [                                                                                                                                                                                                                                                                                                                                                                                                                                                         CAATGGAGATGT AATAAAACGACTCAATAAAACAAAAGAG GATGCCAACATCCTGATTTAAGAGGTGAGAGAGAGAAGCGAGATACTCGCATTAAAAACAAAGAAAAAGCTGCTCTGGCTGCTAAGAAAAAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AW061630             [                                                                                                                                                                                                                                                                                                                                                                                                                                                          AATGGAGATGTGCATAAAACGACTCAATAAAACAAAAGAGCAATGCCAACATCCTGATTTAAGAGGTGAGAGAGAGGAGCGAGATACTCGCATTAAAAACAAAGAAAAAGCTGCTCTGGCTGCTAAGAAAAAGTCAGAACTTGAGGCACAGAAAGTCCGTGCAGC GAAGCAGGAAAAAAGATCCTACGATCGTCTGTTTGTTGAGAGTAAGATGAGAACAAATGAAGATGGCTATGATTCGGATGATTTTATGTAAAAAAGAAATATGAGTACCTCCCTACATCTAAAGGTGTCTCATCTCTTAACTTTATTTCCTACTTATCGGTTACTTTTTCTGAATTGTTGATCGTTTCATCTGTAATAAAAACC                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD077052             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AGCGAGATACTCGCATTAAAAACAAAGAAAAAGCTGCTCTGGCTGCTAAGAAAAAGTCAGAACTTGAGGCACAGAAAGTCCGTGCAGCGGAAGCA GAAAAAAGATCCTACGATCGTCTGTTTGTTGAGAGTAAGATGAGAACAAATGAAGATGGCTATGATTCGGATGATTTTATGTAAAAAAGAAATATGAGTACCTCCCTACATCTAAAGGTGTCTCATCTCTTAACTTTATTTCCTACTTATCGGTTACTTTTTCTGAATTGTTGATCGTTTCATCTGTAATAAAAACCATTTTGGTTTACTTGTATATATTATAATGTAAATTTTCTTTGCGATTCTATGTTTGATGAGACTGCTCCGGATGCTAACTTTCCATACATAAACGATATAATTGAGATTATGGACCAATCAGTGTTAGATCACGATTGAAAACCTGAAAGCATTTCTGAAGAGTCTTTAACTAGGATAAAACGGTCGTCCAGTGCTTCCACGCTTCATTGACGGTCTAACATTGATCGGTTTATGATCTCAATTGAAACTCAACCATCTCCACAACCCTATTCTAATAAACAATATAATTTAAT]
[-] EMBL AI723352             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AAAC AAGAAAAAGCTGCTCTGGCTGCTAAGAAAAAGTCAGAACTTGAGGCACAGAAAGTCCGTGCAGCGGAAGCA GAAAAAAGATCCTACGATCGTCTGTTTGTTGAGAGTAAGATGAGAACAAATGAAGATGGCTATGATTCGGATGATTTTATGTAAAAAAGAAATATGAGTACCTCCCTACATCTAAAGGTGTCTCATCTCTTAACTTTATTTCCTACTTATCGGTTACTTTTTCNNAATTGTTGATCGTTTCATCTGTAATAAAAACCA                                                                                                                                                                                                                                                                                                     ]




>consensus_10843#0
CGAGGCGCGGTCCTGTTTGGGAGTCCATTTCGTCCACCTCATACATTCTGATTAAGTAAC
CAGTAATTATGGTCCTGCACTTTAAGTGTGAACTTGTTCAGCCTCCTTATTTTATTTACA
TGGGAGAAGATAAACATGAAAATGATGAGCTTATTCGTTGGGGATGGCCAGAGGACGTTT
GGTTTCATGTAGATGCTCTATCATCTGCTCATGTTTACCTACGACTGAAGGAAGGGGAAA
CTTTAGATGATGTCCCCGCTGCCGTTATACAGGACTGTGCACAACTAGTCAAGGAAAACA
GCATCCAAGGTTGCAAACTTAACGATGTCACTGTTGTATATACCAAATGGGAGAACCTGA
AAAAAACCAATGATATGGATGCTGGCCAAGTCTCCTTTCACAATAATAAAGCAGTTCAAA
AGATCGTAGTTGAAAAACGCAATGGAGATGTAATAAAACGACTCAATAAAACAAAAGAGC
AATGCCAACATCCTGATTTAAGAGGTGAGAGAGAGAAGCGAGATACTCGCATTAAAAACA
AAGAAAAAGCTGCTCTGGCTGCTAAGAAAAAGTCAGAACTTGAGGCACAGAAAGTCCGTG
CAGCGGAAGCAGAAAAAAGATCCTACGATCGTCTGTTTGTTGAGAGTAAGATGAGAACAA
ATGAAGATGGCTATGATTCGGATGATTTTATGTAAAAAAGAAATATGAGTACCTCCCTAC
ATCTAAAGGTGTCTCATCTCTTAACTTTATTTCCTACTTATCGGTTACTTTTTCTGAATT
GTTGATCGTTTCATCTGTAATAAAAACCATTTTGGTTTACTTGTATATATTATAATGTAA
ATTTTCTTTGCGATTCTATGTTTGATGAGACTGCTCCGGATGCTAACTTTCCATACATAA
ACGATATAATTGAGATTATGGACCAATCAGTGTTAGATCACGATTGAAAACCTGAAAGCA
TTTCTGAAGAGTCTTTAACTAGGATAAAACGGTCGTCCAGTGCTTCCACGCTTCATTGAC
GGTCTAACATTGATCGGTTTATGATCTCAATTGAAACTCAACCATCTCCACAACCCTATT
CTAATAAACAATATAATTTAAT

consensusID : consensus_10843#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 772
fasta sequence

                              [ATTGAATTTGTGTCATATCAGGTTACGTCTTCAAATACAAATTACCTTTTTTTAGAGCGTATGACAATGTATGATTGGATGACTGTTCGCTTAAATCATTAATAACCTCGACTTTTTAACCAAAGAATAGGCGATGTAATACCTGATGTTTAATCAGTCAGCCACAACGTAGGACAACACACATATATACATCGGTCCAAGTTACCACACCTCGTTAGCACAACAAGATGAACACCAAATTCATAGAAGTGGTTACCCACAGTCTTTAACCATTGGTTGCGATGGGCACGTGGACCCCAACCAATTAGTTTGCATCTACCAACATGGCTCAGACTAGAAGTTAGTGACTTCAAGACTGATGCCAAGTTTTGATTTGGCCGCCCATGACTTTCTTCCAACCGTCTCTAACTGTAGTTAGCATTGCGCGTTGTAGTAATCAGTGTTCAGGCATACGTAACTGTTATATCCTAGTGACGACGTAAGTATAGGTAACTTCCGGNGCCTATTAATGAACTNTTATTCTATATATATCCTTACTTTTTAACTATTAAAGTAA-TAGATTGGGTATATCTATATTCATCTTATT-TATAGCTTCATTNTGACCTGGTGAT--TTATATATACGAANTACTGGCTNCTAAA-TATATNCAGNTNACTGGATATGGNATCCNACGNTCACAGCCACATTCGGCTGGATTTTGAAC-AATATTATTTTCTATTTTATGGTGGGATGCCTGGATTATAAACCGA-TATGCTTG-AATTAATGGGTTGTAAA]

[+] EMBL CD083097             [ATTGAATTTGTGTCATATCAGGTTACGTCTTCAAATACAAATTACCTTTTTTTAGAGCGTATGACAATGTATGATTGGATGACTGTTCGCTTAAATCATTAATAACCTCGACTTTTTAACCAAAGAATAGGCGATGTAATACCTGATGTTTAATCAGTCAGCCACAACGTAGGACAACACACATATATACATCGGTCCAAGTTACCACACCTCGTTAGCACAACAAGATGAACACCAAATTCATAGAAGTGGTTACCCACAGTCTTTAACCATTGGTTGCGATGGGCACGTGGACCCCAACCAATTAGTTTGCATCTACCAACATGGCTCAGACTAGAAGTTAGTGACTTCAAGACTGATGCCAAGTTTTGATTTGGCCGCCCATGACTTTCTTCCAACCGTCTCTAACTGTAGTTAGCATTGCGCGTTGTAGTAATCAGTGTTCAGGCATACGTAACTGTTATATCCTAGTGACGACGTAAGTATAGGTAACTTCCGGNGCCTATTAATGAACTNTTATTCTATATATATCCTTACTTTTTAACTATTAAAGTAA TAGATTGGGTATATCTATATTCATCTTATT TATAGCTTCATTNTGACCTGGTGAT  TTATATATACGAANTACTGGCTNCTAAA TATATNCAGNTNACTGGATATGGNATCCNACGNTCACAGCCACATTCGGCTGGATTTTGAAC AATATTATTTTCTATTTTATGGTGGGATGCCTGGATTATAAACCGA TATGCTTG AATTAATGGGTTGTAA ]
[-] EMBL CD076671             [                                                                                                                                                                                                                                                  ATAGAAGTGGTTACCCACAGTCTTTAACCATTGGTTGCGATGGGCACGTGGACCCCAACCAATTAGTTTGCATCTACCAACATGGCTCAGACTAGAAGTTAGTGACTTCAAGACTGATGCCAAGTTTTGATTTGGCCGCCCATGACTTTCTTCCAACCGTCTCTAACTGTAGTTAGCATTGCGCGTTGTAGTAATCAGTGTTCAGGCATACGTAACTGTTATATCCTAGTGACGACGTAAGTATAGGTAACTTCCGGGGCCTATTAATGAACTTTTATTCTATATATATCCTTACTTTTTAACTATT AAGTAATTAGATTGTGTATATCTATATTCATCTTATTATA AGCTTCATTTTGACCTGTTGATTATTAT TATACGAATTACTGTCTCCTAAATTATATTCAGTTTACTGATTATTGTATCCCACGTTCACAGCCACATTCGGCTGTATCTTGTACAAATATTATTTTCTATTTTATGGTGTGATGCCTGGTATATAAACCGAGTATGCTTGAAATAAATGGTTTGTAta]




>consensus_10843#1
ATTGAATTTGTGTCATATCAGGTTACGTCTTCAAATACAAATTACCTTTTTTTAGAGCGT
ATGACAATGTATGATTGGATGACTGTTCGCTTAAATCATTAATAACCTCGACTTTTTAAC
CAAAGAATAGGCGATGTAATACCTGATGTTTAATCAGTCAGCCACAACGTAGGACAACAC
ACATATATACATCGGTCCAAGTTACCACACCTCGTTAGCACAACAAGATGAACACCAAAT
TCATAGAAGTGGTTACCCACAGTCTTTAACCATTGGTTGCGATGGGCACGTGGACCCCAA
CCAATTAGTTTGCATCTACCAACATGGCTCAGACTAGAAGTTAGTGACTTCAAGACTGAT
GCCAAGTTTTGATTTGGCCGCCCATGACTTTCTTCCAACCGTCTCTAACTGTAGTTAGCA
TTGCGCGTTGTAGTAATCAGTGTTCAGGCATACGTAACTGTTATATCCTAGTGACGACGT
AAGTATAGGTAACTTCCGGNGCCTATTAATGAACTNTTATTCTATATATATCCTTACTTT
TTAACTATTAAAGTAATAGATTGGGTATATCTATATTCATCTTATTTATAGCTTCATTNT
GACCTGGTGATTTATATATACGAANTACTGGCTNCTAAATATATNCAGNTNACTGGATAT
GGNATCCNACGNTCACAGCCACATTCGGCTGGATTTTGAACAATATTATTTTCTATTTTA
TGGTGGGATGCCTGGATTATAAACCGATATGCTTGAATTAATGGGTTGTAAA

consensusID : consensus_10843#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 500
fasta sequence

                              [TACACTCGCTCGCTCACATCTCTCGATACAACTACACCTCTTCACAGTCCACTCTCTCCATCGCCAAACCAACACCACCGTCTTCACTCCTGAAACTCATCAACCAACCACTCTTGTCGCCGCCACCGCCGCCGCCACAAAAACTATACTCCCGTCTAGTCAGTACACTCCAATTCAAAAATACACTCGCTCGCTCACATCTCTCGATACAACTACACCTCTTCACAGTCCACTCTCTCCATCGCCAAACCAACACCACCGTCTTCGCTCCTGAAACTCATCAACCAACCACTCTTGTCGCCGCCACCGCCGCCGCAGCAAAGCTCCCAAAATACTACAACCCAACCACTGTCAACGCCGTTAAACTTGCGGAGCAACAACAAAAGCGCAAATTATTGTGGTCAAAAAAAGATGGTGAAAACACTAGTTCTGAAAGTAAAACTCTTTGGACAGCCACATCTTTAATTGCTGGGAAAGGTGATTCTGCAGCTGCAGCTAAA]

[+] EMBL CD123376             [TACACTCGCTCGCTCACATCTCTCGATACAACTACACCTCTTCACAGTCCACTCTCTCCATCGCCAAACCAACACCACCGTCTTCACTCCTGAAACTCATCAACCAACCACTCTTGTCGCCGCCACCGCCGCCGCCACAAAAACTATACTCCCGTCTAGTCAGTACACTCCAATTCAAAAATACACTCGCTCGCTCACATCTCTCGATACAACTACACCTCTTCACAGTCCACTCTCTCCATCGCCAAACCAACACCACCGTCTTCGCTCCTGAAACTCATCAACCAACCACTCTTGTCGCCGCCACCGCCGCCGCAGCAAAGCTCCCAAAATACTACAACCCAACCACTGTCAACGCCGTTAAACTTGCGGAGCAACAACAAAAGCGCAAATTATTGTGGTCAAAAAAAGATGGTGAAAACACTAGTTCTGAAAGTAAAACTCTTTGGACAGCCACATCTTTAATTGCTGGGAAAGGTGATTCTGCAGCTGCAGCTAAA]




>consensus_10843#2
TACACTCGCTCGCTCACATCTCTCGATACAACTACACCTCTTCACAGTCCACTCTCTCCA
TCGCCAAACCAACACCACCGTCTTCACTCCTGAAACTCATCAACCAACCACTCTTGTCGC
CGCCACCGCCGCCGCCACAAAAACTATACTCCCGTCTAGTCAGTACACTCCAATTCAAAA
ATACACTCGCTCGCTCACATCTCTCGATACAACTACACCTCTTCACAGTCCACTCTCTCC
ATCGCCAAACCAACACCACCGTCTTCGCTCCTGAAACTCATCAACCAACCACTCTTGTCG
CCGCCACCGCCGCCGCAGCAAAGCTCCCAAAATACTACAACCCAACCACTGTCAACGCCG
TTAAACTTGCGGAGCAACAACAAAAGCGCAAATTATTGTGGTCAAAAAAAGATGGTGAAA
ACACTAGTTCTGAAAGTAAAACTCTTTGGACAGCCACATCTTTAATTGCTGGGAAAGGTG
ATTCTGCAGCTGCAGCTAAA

consensusID : consensus_10843#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 497
fasta sequence

                              [AAATACAATCATAAATTAGGGTTTTTGTCTTTTTCACTTTGCATAGCAGAATATGCATTGTAATCTATATGGCTGGATGAACTGAAACCAAGACCGGCGCCTCGCTGAGTATGTGTTATGGTGCGAGACATCTCATATTCGTGTTCAAGTCGCCGGAAAAGTTCAGCTTGCGCTTCAGCTCGACGCAAAGCTTCAGTTTCATTGACATGAGTAGCACTTCCGTCCACGACTTCTTCAGAAGAATCATGAATCCCCATCAATTTCCGAAATTTAGCTGCAGCTGCAGAATCACCTTTCCCAGCAATTAAAGATGTGGCTGTCCAAAGAGTTTTACTTTCAGAACTAGTGTTTTCACCATCTTTTTTTGACCACAATAATTTGCGCTTTTGTTGTTGCTCCGCAAGTTTAACGGCGTTGACAGTGGTTGGGTTGTAGTATTTTGGGAGCTTTGCTGCGGCGGCAGCGGCTAATGCCTGAGCCTTGGCTTGCACTGCTGA]

[-] EMBL CD139120             [AAATACAATCATAAATTAGGGTTTTTGTCTTTTTCACTTTGCATAGCAGAATATGCATTGTAATCTATATGGCTGGATGAACTGAAACCAAGACCGGCGCCTCGCTGAGTATGTGTTATGGTGCGAGACATCTCATATTCGTGTTCAAGTCGCCGGAAAAGTTCAGCTTGCGCTTCAGCTCGACGCAAAGCTTCAGTTTCATTGACATGAGTAGCACTTCCGTCCACGACTTCTTCAGAAGAATCATGAATCCCCATCAATTTCCGAAATTTAGCTGCAGCTGCAGAATCACCTTTCCCAGCAATTAAAGATGTGGCTGTCCAAAGAGTTTTACTTTCAGAACTAGTGTTTTCACCATCTTTTTTTGACCACAATAATTTGCGCTTTTGTTGTTGCTCCGCAAGTTTAACGGCGTTGACAGTGGTTGGGTTGTAGTATTTTGGGAGCTCTGCTGCGGCGGCAGCGG GGATGCATGAGCCTTGGCTTGCACTGCTGA]
[-] EMBL CD139108             [        TCATAAATTAGGGTGTTTGTCTTTTTCACTTTGCATAGCAGAATATGCATTGTAATCTATATGGCTGGATGAACTGAAACCAAGACCGGCGCCTCGCTGAGTATGTGTTATGGTGCGAGACATCTCATATTCGTGTTCAAGTCGCCGGAAAAGTTCAGCTTGCGCTTCAGCTCGACGCAAAGCTTCAGTTTCATTGACATGAGTAGCACTTCCGTCCACGACTTCTTCAGAAGAATCATGAATCCCCATCAATTTCCGAAATTTAGCTGCAGCTGCAGAATCACCTTTCCCAGCAATTAAAGATGTGGCTGTCCAAAGAGTTTTACTTTCAGAACTAGTGTTTTCACCATCTTTTTTTGACCACAATAATTTGCGCTTTTGTTGTTGCTCCGCAAGTTTAACGGCGTTGACAGTGGTTGGGTTGTAGTATTTTGGGAGCTTTGCTGCGGCGGCAGCGGCTAATGCCTGAGC                  ]
[-] EMBL CD139163             [                                                           GTAATCTATATGGCTGGATGAACTGAAACCCAGACCGGCGCCTCGCTGAGTATGTGTTATGGTGCGAGACATCTCATATTCGTGTTCAAGTCGCCGGAAAAGTTCAGCTTGCGCTTCAGCTCGACGCAAAGCTTCAGTTTCATTGACATGAGTAGCACTTCCGTCCACGACTTCTTCAGAAGAATCATGAATCCCCATCAATTTCCGGAATTTAGCTGCAGCTGCAGAATCACCTTTCCCAGCAATTAAAGATGTGGCTGTCCAAAGAGTTTTACTTTCAGAACTAGTGTTTTCACCATCTTTTTTCGACCACAATAATTTGCGCTTTTGTTGTTGCTCCGCAAGTTTAACGGCGTTGACAGTGGTTGGGTTGTAGTATTTTGGGAGCTTTGCTGCGGCGGCAGCGGCTAATGCCTGAGC                  ]
[-] EMBL CD139156             [                                                                       GCTGGATGAACTGAAACCAAGACCGGCGCCTCGCTGAGTATGTGTTATGGTGCGAGACATCTCATATTCGTGTTCAAGTCGCCGGAAAAGTTCAGCTTGCGCTTCAGCTCGACGCAAAGCTTCAGTTTCATTGACATGAGTAGCACTTCCGTCCACGACTTCTTCAGAAGAATCATGAATCCCCATCAATTTCCGAAATTTAGCTGCAGCTGCAGAATCACCTTTCCCAGCAATTAAAGATGTGGCTGTCCAAAGAGTTTTACTTTCAGAACTAGTGTTTTCACCATCTTTTTTTGACCACAATAATTTGCGCTTTTGTTGTTGCTCCGCAAGTTTAACGGCGTTGACAGTGGTTGGGTTGTAGTATTTTGGGAGCTTTGCTGCGGCGGCAGCGGCTAATGCCTGAGC                  ]
[+] EMBL CD160229             [                                                                                   GAAACCAAGACCGGCGCCTCGCTGAGTATGTGTTATGGTGCGAGACATCTCATATTCGTGTTCAAGTCGCCGGAAAAGTTCAGCTTGCGCTTCAGCTCGACGCAAAGCTTCAGTTTCATTGACATGAGTAGCACTTCCGTCCACGACTTCTTCAGAAGAATCATGAATCCCCATCAATTTCCGAAATTTAGCTGCAGCTGCAGAATCACCTTTCCCAGCAATTAAAGATGTGGCTGTCCAAAGAGTTTTACTTTCAGAACTAGTGTTTTCACCATCTTTTTTTGACCACAATAATTTGCGCTTTTGTTGTTGCTCCGCAAGTTTAACGGCGTTGACAGTGGTTGGGTAGTAGTATATAGGGAGCTTTGCTGCGGCGGCAGCGGCTAATGCCT                      ]
[-] EMBL CD139162             [                                                                                               GGCGCCTCGCTGAGTATGTGTTATGGTGCGAGACATCTCATATTCGTGTTCAAGTCGCCGGAAAAGTTCAGCTTGCGCTTCAGCTCGACGCAAAGCTTCAGTTTCATTGACATGAGTAGCACTTCCGTCCACGACTTCTTCAGAAGAATCATGAATCCCCATCAATTTCCGGAATTTAGCTGCAGCTGCAGAATCACCTTTCCCAGCAATTAAAGATGTGGCTGTCCAAAGAGTTTTACTTTCAGAACTAGTGTTTTCACCATCTTTTTTCGACCACAATAATTTGCGCTTTTGTTGTTGCTCCGCAAGTTTAACGGCGTTGACAGTGGTTGGGTTGTAGTATTTTGGGAGCTTTGCTGCGGCGGCAGCGGCTAATGCCTGAGC                  ]




>consensus_10843#3
AAATACAATCATAAATTAGGGTTTTTGTCTTTTTCACTTTGCATAGCAGAATATGCATTG
TAATCTATATGGCTGGATGAACTGAAACCAAGACCGGCGCCTCGCTGAGTATGTGTTATG
GTGCGAGACATCTCATATTCGTGTTCAAGTCGCCGGAAAAGTTCAGCTTGCGCTTCAGCT
CGACGCAAAGCTTCAGTTTCATTGACATGAGTAGCACTTCCGTCCACGACTTCTTCAGAA
GAATCATGAATCCCCATCAATTTCCGAAATTTAGCTGCAGCTGCAGAATCACCTTTCCCA
GCAATTAAAGATGTGGCTGTCCAAAGAGTTTTACTTTCAGAACTAGTGTTTTCACCATCT
TTTTTTGACCACAATAATTTGCGCTTTTGTTGTTGCTCCGCAAGTTTAACGGCGTTGACA
GTGGTTGGGTTGTAGTATTTTGGGAGCTTTGCTGCGGCGGCAGCGGCTAATGCCTGAGCC
TTGGCTTGCACTGCTGA

consensusID : consensus_10843#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 467
fasta sequence

                              [CGTGCCGCGGGNAATTCGATTACTGCGAACCGGCTTCTTCAAACACGTATACAAGAATTAGAAGAAGATTTAGAAGCGGAACGTGCAGCTCGTTCAAAAGCTGAAAAGAGTCGACAACAANCTTGAAAGTGAATTAGAAGAAGTTGTTGATCGTTTAGAAGAACAAGATGGTGCTACAGCAGCACAAAGTGATTTAACTAAAAAACGTGAGGCTGAATTAATGAAATTAAAACGTGATTTAGAAGATACACATTTACAAAATGAACAAGCTATAGCTACAATGCGTAAAAAACAAAGTGATGCTATTAATGAATTAGCTGATCAATTAGATCAAGCTAATAAAGCTAAAGCAAAAGCTGAAAAAGAACGAAGTCAATTCAAAGCTGNAATTAGATGATGCACATAATCAGGTGGATAGTATTATGAAAGCTAAATTGAATTCCGAGAAAACAGTGAAGGCTCTAGAA]

[+] EMBL CD130628             [CGTGCCGCGGGNAATTCGATTACTGCGAACCGGCTTCTTCAAACACGTATACAAGAATTAGAAGAAGATTTAGAAGCGGAACGTGCAGCTCGTTCAAAAGCTGAAAAGAGTCGACAACAANCTTGAAAGTGAATTAGAAGAAGTTGTTGATCGTTTAGAAGAACAAGATGGTGCTACAGCAGCACAAAGTGATTTAACTAAAAAACGTGAGGCTGAATTAATGAAATTAAAACGTGATTTAGAAGATACACATTTACAAAATGAACAAGCTATAGCTACAATGCGTAAAAAACAAAGTGATGCTATTAATGAATTAGCTGATCAATTAGATCAAGCTAATAAAGCTAAAGCAAAAGCTGAAAAAGAACGAAGTCAATTCAAAGCTGNAATTAGATGATGCACATAATCAGGTGGATAGTATTATGAAAGCTAAATTGAATTCCGAGAAAACAGTGAAGGCTCTAGAA]




>consensus_10843#4
CGTGCCGCGGGNAATTCGATTACTGCGAACCGGCTTCTTCAAACACGTATACAAGAATTA
GAAGAAGATTTAGAAGCGGAACGTGCAGCTCGTTCAAAAGCTGAAAAGAGTCGACAACAA
NCTTGAAAGTGAATTAGAAGAAGTTGTTGATCGTTTAGAAGAACAAGATGGTGCTACAGC
AGCACAAAGTGATTTAACTAAAAAACGTGAGGCTGAATTAATGAAATTAAAACGTGATTT
AGAAGATACACATTTACAAAATGAACAAGCTATAGCTACAATGCGTAAAAAACAAAGTGA
TGCTATTAATGAATTAGCTGATCAATTAGATCAAGCTAATAAAGCTAAAGCAAAAGCTGA
AAAAGAACGAAGTCAATTCAAAGCTGNAATTAGATGATGCACATAATCAGGTGGATAGTA
TTATGAAAGCTAAATTGAATTCCGAGAAAACAGTGAAGGCTCTAGAA

consensusID : consensus_10843#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 412
fasta sequence

                              [GGTGTTGGTTTGGCGATGGAGAGAGTGGACTGTGAAGAGGTGTAGTTGTATCGAGAGATGTGAGCGAGCGAGTGTATTTTTGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGCGGCGGTGGCGGCGACAAGAGTGGTTGGTTGATGAGCTTGACTCTAGTCCGACTTTGTGAGGAGACATGATGGATGTAGTATAGGTGGGAG-CTGGGTGCTTC-GGTGTCCA-GCGCAAATGAAATACCACTGCTATCATTGTTTCTTTACTTATTCAGNGAAACGGGAACGAAATTGTATTTTGGTTCAAAGCACATTTCGGGGTGCGTGGTCTATCGCTGCGTGCTTCGATATCTTGGTCATGTCAGATTCCCGATAGTGCATGTGTACACAGGAACAGCTATGACC]

[+] EMBL CD179891             [GGTGTTGGTTTGGCGATGGAGAGAGTGGACTGTGAAGAGGTGTAGTTGTATCGAGAGATGTGAGCGAGCGAGTGTATTTTTGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCGGCGGCGGTGGCGGCGACAAGAGTGGTTGGTTGATGAGCTTGACTCTAGTCCGACTTTGTGAGGAGACATGATGGATGTAGTATAGGTGGGAG CTGGGTGCTTC GGTGTCCA GCGCAAATGAAATACCACTGCTATCATTGTTTCTTTACTTATTCAGNGAAACGGGAACGAAA                                                                                                                  ]
[-] EMBL CD061716             [                                                                                                                                                                                                                   TGGGAGACTGGGTGCTTCAGGTGTCCANGCGCAAATGAAATACCACTGCTATCATTGTTTCTTTACTTATTCAGTGAAACGGGAACGAAATTGTATTTTGGTTCAAAGCACATTTCGGGGTGCGTGGTCTATCGCTGCGTGCTTCGATATCTTGGTCATGTCAGATTCCCGATAGTGCATGTGTACACAGGAACAGCTATGACC]




>consensus_10843#5
GGTGTTGGTTTGGCGATGGAGAGAGTGGACTGTGAAGAGGTGTAGTTGTATCGAGAGATG
TGAGCGAGCGAGTGTATTTTTGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTG
TGGCGGCGGCGGTGGCGGCGACAAGAGTGGTTGGTTGATGAGCTTGACTCTAGTCCGACT
TTGTGAGGAGACATGATGGATGTAGTATAGGTGGGAGCTGGGTGCTTCGGTGTCCAGCGC
AAATGAAATACCACTGCTATCATTGTTTCTTTACTTATTCAGNGAAACGGGAACGAAATT
GTATTTTGGTTCAAAGCACATTTCGGGGTGCGTGGTCTATCGCTGCGTGCTTCGATATCT
TGGTCATGTCAGATTCCCGATAGTGCATGTGTACACAGGAACAGCTATGACC

consensusID : consensus_10843#6
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 229
fasta sequence

                              [TGTATTTTTGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCAGTGGCGGTGGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGAGCGAAGACGGTGGTGTTGGTTTGGCGATGGAGAGAGTGGACTGTGAAGAGGTGTGGTTGGTTGATGAGTTTCAGGAGCGAAGACGGTGGTGTTGGTTTGGCGATGGAGAGAGTGGACTGTGAAGAGGAAGG]

[+] EMBL CD126908             [TGTATTTTTGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCAGTGGCGGTGGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGAGCGAAGACGGTGGTGTTGGTTTGGCGATGGAGAGAGTGGACTGTGAAGAGGTGTGGTTGGTTGATGAGTTTCAGGAGCGAAGACGGTGGTGTTGGTTTGGCGATGGAGAGAGTGGACTGTGAAGAGGAAGG]




>consensus_10843#6
TGTATTTTTGAATTGGAGTGTACTGACTAGACGGGAGTATAGTTTTTGTGGCAGTGGCGG
TGGCGGCGACAAGAGTGGTTGGTTGATGAGTTTCAGGAGCGAAGACGGTGGTGTTGGTTT
GGCGATGGAGAGAGTGGACTGTGAAGAGGTGTGGTTGGTTGATGAGTTTCAGGAGCGAAG
ACGGTGGTGTTGGTTTGGCGATGGAGAGAGTGGACTGTGAAGAGGAAGG

consensusID : consensus_10843#7
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 148
fasta sequence

                              [GGACTGTGAAGAGGTGTAGTTGTATCGAGAGATGTGAGCGAGCGAGTGTATTTTTGGCGATGGAGAGAGTGGACTGTGAAGAGGTGTAGTTGTATCGAGAGATGTGAGCGTAGCAAGGAGATGTGTATTTTCGAATTGGAGTGTACTG]

[+] EMBL CD167769             [GGACTGTGAAGAGGTGTAGTTGTATCGAGAGATGTGAGCGAGCGAGTGTATTTTTGGCGATGGAGAGAGTGGACTGTGAAGAGGTGTAGTTGTATCGAGAGATGTGAGCGTAGCAAGGAGATGTGTATTTTCGAATTGGAGTGTACTG]




>consensus_10843#7
GGACTGTGAAGAGGTGTAGTTGTATCGAGAGATGTGAGCGAGCGAGTGTATTTTTGGCGA
TGGAGAGAGTGGACTGTGAAGAGGTGTAGTTGTATCGAGAGATGTGAGCGTAGCAAGGAG
ATGTGTATTTTCGAATTGGAGTGTACTG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10843#5      ------------------------------------------------------------
consensus_10843#7      ------------------------------------------------------------
consensus_10843#6      ------------------------------------------------------------
consensus_10843#1      ----------------------ATTGAATTTGTGTCATATCAGGTTACGTCTTCAAATAC 38
consensus_10843#0      CGAGGCGCGGTCCTGTTTGGGAGTCCATTTCGTCCACCTCATACATTCTGATTAAGTAAC 60
consensus_10843#3      ------------------------------------------------------------
consensus_10843#4      ------------------------------------------------------------
consensus_10843#2      ------------------------------------------------------------
                                                                                   

consensus_10843#5      ------------------------------------------------------------
consensus_10843#7      ------------------------------------------------------------
consensus_10843#6      ------------------------------------------------------------
consensus_10843#1      AAATTACCTTTTTTTAGAGCGTATGACAATGTATGATTGGATGACTGTTCGCTTAAATCA 98
consensus_10843#0      CAGTAATTATGGTCCTGCACTTTAAGTGTGAACTTGTTCAGCCTCCTTATTTTATTTACA 120
consensus_10843#3      ------------------------------------------------------------
consensus_10843#4      ------------------------------------------------------------
consensus_10843#2      ------------------------------------------------------------
                                                                                   

consensus_10843#5      ------------------------------------------------------------
consensus_10843#7      ------------------------------------------------------------
consensus_10843#6      ------------------------------------------------------------
consensus_10843#1      TTAATAACCTCGACTTTTTAACCAAAGAATAGGCGATGTAATACCTGATGTTTAATCAGT 158
consensus_10843#0      TGGGAGAAGATAAACATGAAAATGATGAGCTTATTCGTTGGGGATGGCCAGAGGACGTTT 180
consensus_10843#3      ------------------------------------------------------------
consensus_10843#4      ------------------------------------------------------------
consensus_10843#2      ------------------------------------------------------------
                                                                                   

consensus_10843#5      ------------------------------------------------------------
consensus_10843#7      ------------------------------------------------------------
consensus_10843#6      ------------------------------------------------------------
consensus_10843#1      CAGCCACAACGTAGGACAACACACATATATACATCGGTCCAAGTTACCACACCTCGTTAG 218
consensus_10843#0      GGTTTCATGTAGATGCTCTATCATCTGCTCATGTTTACCTACGACTGAAGGAAGGGGAAA 240
consensus_10843#3      ------------------------------------------------------------
consensus_10843#4      ------------------------------------------------------------
consensus_10843#2      ------------------------------------------------------------
                                                                                   

consensus_10843#5      ------------------------------------------------------------
consensus_10843#7      ------------------------------------------------------------
consensus_10843#6      ------------------------------------------------------------
consensus_10843#1      CACAACAAGATGAACACCAAATTCATAGAAGTGGTTACCCACAGTCTTTAACCATTGGTT 278
consensus_10843#0      CTTTAGATGATGTCCCCGCTGCCGTTATACAGGACTGTGCACAACTAGTCAAGGAAAACA 300
consensus_10843#3      ------------------------------------------------------------
consensus_10843#4      ------------------------------------------------------------
consensus_10843#2      ----------------------------------------------------------TA 2
                                                                                   

consensus_10843#5      ------------------------------------------------------------
consensus_10843#7      ------------------------------------------------------------
consensus_10843#6      ------------------------------------------------------------
consensus_10843#1      GCGATGGGCACGTGGACCCCAACCAATTAGTTTGCATCTAC-CAACATGGCTCAGACTAG 337
consensus_10843#0      GCATCCAAGGTTGCAAACTTAACGATGTCACTGTTGTATATACCAAATGGGAGAACCTGA 360
consensus_10843#3      -------------AAATACAATCATAAATTAGGGTTTTTGTCTTTTTCACTTTGCATAGC 47
consensus_10843#4      -------------------------------------------CGTGCCGCGGGNAATTC 17
consensus_10843#2      CACTCGCTCGCTCACATCTCTCGATACAACTACACCTCTTCACAGTCCACTCTCTCCATC 62
                                                                                   

consensus_10843#5      -----------GGTGTTGGTTTGGCGATGGAGAGAGTGGACTGTGAAGAGGTGTAGTTGT 49
consensus_10843#7      -------------------------------------GGACTGTGAAGAGGTGTAGTTGT 23
consensus_10843#6      ------------------------------------------------------------
consensus_10843#1      AAGTTAGTGACTTCAAGACTGATGCCAAGTTTTGATTTGGCCGCCCATGACTTTCTTCCA 397
consensus_10843#0      AAAAAACCAATGATATGGATGCTGGCCAAGTCTCCTTTCACAATAATAAAG--CAGTTCA 418
consensus_10843#3      AGAATATGCATTGTAATCTATATGGCTGGATGAACTGAAACCAAGACCGGCGCCTCGCTG 107
consensus_10843#4      GATTACTGCGAACCGGCTTCTTCAAACACGTATACAAGAATTAGAAGAAGATTTAGAAGC 77
consensus_10843#2      GCCAAACCAACACCACCGTCTTCACTC--CTGAAACTCATCAACCAACCACTCTTGTCGC 120
                                                                                   

consensus_10843#5      ATCGAG---AGATGTGAGCGAGCGAGTGTATTTTTGA----ATTGGAGTGTACTGACTAG 102
consensus_10843#7      ATCGAG---AGATGTGAGCGAGCGAGTGTATTTTTGGC---GATGGAGAGAGTGGACTGT 77
consensus_10843#6      --------------------------TGTATTTTTGA----ATTGGAGTGTACTGACTAG 30
consensus_10843#1      ACCGTCTCTAACTGTAGTTAGCATTGCGCGTTGTAGTA---ATCAGTGTTCA-GGCATAC 453
consensus_10843#0      AAAGATCGTAGTTGAAAAACGCAATGGAGATGTAATAA---AACGACTCAATAAAACAAA 475
consensus_10843#3      AGTATGTGTTATGGTGCGAGACATCTCATATTCGTGTTCA-AGTCGCCGGAAAAGTTCAG 166
consensus_10843#4      GGAACGTGCAGCTCGTTCAAAAGCTGAAAAGAGTCGACAACAANCTTGAAAGTGAATTAG 137
consensus_10843#2      CGCCACCGCCGCCGCCACAAAAACTATACTCCCGTCTA---GTCAGTACACTCCAATTCA 177
                                                                                   

consensus_10843#5      ACGGGAGTATAGTTTTTGTGGCGGCGGCGGTGGCGGCGACAAGAGTGG----TTGGTTGA 158
consensus_10843#7      GAAGAGGTGTAGTTGTATCGAGAGATGTGAGCGTAGCAAGGAGAT--G----TGTATTTT 131
consensus_10843#6      ACGGGAGTATAGTTTTTGTGGCAGTGGCGGTGGCGGCGACAAGAGTGG----TTGGTTGA 86
consensus_10843#1      GTAACTGTTATATCCTAGTGACGACGTAAGTATAGGTAACTTCCGGNG----CCTATTAA 509
consensus_10843#0      AGAGCAATGCCAACATCCTGATTTAAGAGGTGAGAGAGAGAAGCGAGA----TACTCGCA 531
consensus_10843#3      CTTGCGCTTCAGCTCGACGCAAAGCTTCAGTTTCATTGACATGAGTAGCACTTCCGTCCA 226
consensus_10843#4      AAGAAGTTGTTGATCGTTTAGAAGAACAAGATGGTGCTACAGCAGCACAAAGTGATTTAA 197
consensus_10843#2      AAAATACACTCGCTCG-CTCACATCTCTCGATACAACTACACCTCTTCACAGTCCACTCT 236
                                                             *                     

consensus_10843#5      TGAGCTTG---ACTCTAGTCCGACTTTGTGAGGAGACA-TGATGGATGTAGTATAGGTGG 214
consensus_10843#7      CGAATTGG---AGTGTACTG---------------------------------------- 148
consensus_10843#6      TGAGTTTC---AGGAGCGAAGACGGTGGTGTTGGTTTGGCGATGGAGAGAGTGGACTGTG 143
consensus_10843#1      TGAACTNT---TATTCTATATATATCCTTACTT-TTTAACTATTAAAGTAATAGATTGGG 565
consensus_10843#0      TTAAAAAC---AAAGAAAAAGCTGCTCTGGCTGCTAAGAAAAAGTCAGAACTTGAGGCAC 588
consensus_10843#3      CGACTTCTTCAGAAGAATCATGAATCCCCATCAATTTCCGAAATTTAGCTGCAGCTGCAG 286
consensus_10843#4      CTAAAAAACGTGAGGCTGAATTAATGAAATTAAAACGTGATTTAGAAGATACACATTTAC 257
consensus_10843#2      CTCCATCGC--CAAACCAACACCACCGTCTTCGCTCCTGAAACTCATCAACCAACCACTC 294
                                                                                   

consensus_10843#5      GAGCTGGGTGCTTCGGTGTCC----AGCGCAAATGAAATACCACTGCTATCATTGTTTCT 270
consensus_10843#7      ------------------------------------------------------------
consensus_10843#6      AAGAGGTGTGGTTGGTTGATG----AGTTTCAG-GAGCGAAGACGGTGGTGTTGGTTTGG 198
consensus_10843#1      TATATCTATATTCATCTTATTTA-TAGCTTCATTNTGACCTGGTGATTTATATATACGAA 624
consensus_10843#0      AGAAAGTCCGTGCAGCGGAAGC---AGAAAAAAGATCCTACGATCGTCTGTTTGTTGAGA 645
consensus_10843#3      AATCACCTTTCCCAGCAATTAA---AGATGTGGCTGTCCAAAGAGTTTTACTTTCAGAAC 343
consensus_10843#4      AAAATGAACAAGCTATAGCTAC---AATGCGTAAAAAACAAAGTGATGCTATTAATGAAT 314
consensus_10843#2      TTGTCGCCGCCACCGCCGCCGCAGCAAAGCTCCCAAAATACTACAACCCAACCACTGTCA 354
                                                                                   

consensus_10843#5      TTACTTATTCAGNGAAACGGGAACGAAATTGTA-TTTTGGTTCAAAGCACATTTCGGGGT 329
consensus_10843#7      ------------------------------------------------------------
consensus_10843#6      CGATGGAGAGAGTGGACTGTGAAGAGGAAGG----------------------------- 229
consensus_10843#1      NTACTGGCTNCTAAATATATNCAGNTNACTGGA-TATGGNATCCNACGNTCACAGCCACA 683
consensus_10843#0      GTAAGATGAGAACAAATGAAGATGGCTATGATT-CGGATGATTTTATGTAAAAAAGAAAT 704
consensus_10843#3      TAGTGTTTTCACCATCTTTTTTTGACCACAATAATTTGCGCTTTTGTTGTTGCTCCGCAA 403
consensus_10843#4      TAGCTGATCAATTAGATCAAGCTAATAAAGCTAAAGCAAAAGCTGA--AAAAGAACGAAG 372
consensus_10843#2      ACGCCGTTAAACTTGCGGAGCAACAACAAAAGCGCAAATTATTGTGGTCAAAAAAAGATG 414
                                                                                   

consensus_10843#5      GCGTGGTCTATCGCTGCGTGCTTCGATATCTTGGTCATGTCAGATTCCCGATAGTGCATG 389
consensus_10843#7      ------------------------------------------------------------
consensus_10843#6      ------------------------------------------------------------
consensus_10843#1      TTCGGCTGGATTTTGAACAATATTATTTTCTATTTTATGGTGGGATGCCTGGATTATAAA 743
consensus_10843#0      ATGAGTACCTCCCTACATCTAAAGGTGTCTCATCTCTTAACTTTATTTCCTACTTATCGG 764
consensus_10843#3      GTTTAACGGCGTTGACAGTGGTTGGGTTGTAGTATTTTGGGAGCTTTGCTGCGGCGGCAG 463
consensus_10843#4      TCAATTCAAAGCTGNAATTAGATGATGCACATAATCAGGTGGATAGTATTATGAAAGCTA 432
consensus_10843#2      GTGAAAACACTAGTTCTGAAAGTAAAACTCTTTGGACAGCCACATCTTTAATTGCTGGGA 474
                                                                                   

consensus_10843#5      TGTACACAGGAACAGCTATGACC------------------------------------- 412
consensus_10843#7      ------------------------------------------------------------
consensus_10843#6      ------------------------------------------------------------
consensus_10843#1      CCGATATGCTTGAATTAATGGGTTGTAAA------------------------------- 772
consensus_10843#0      TTACTTTTTCTGAATTGTTGATCGTTTCATCTGTAATAAAAACCATTTTGGTTTACTTGT 824
consensus_10843#3      CGGCTAATGCCTGAGCCTTGGCTTGCACTGCTGA-------------------------- 497
consensus_10843#4      AATTGAATTCCGAGAAAACAGTGAAGGCTCTAGAA------------------------- 467
consensus_10843#2      AAGGTGATTCTGCAGCTGCAGCTAAA---------------------------------- 500
                                                                                   

consensus_10843#5      ------------------------------------------------------------
consensus_10843#7      ------------------------------------------------------------
consensus_10843#6      ------------------------------------------------------------
consensus_10843#1      ------------------------------------------------------------
consensus_10843#0      ATATATTATAATGTAAATTTTCTTTGCGATTCTATGTTTGATGAGACTGCTCCGGATGCT 884
consensus_10843#3      ------------------------------------------------------------
consensus_10843#4      ------------------------------------------------------------
consensus_10843#2      ------------------------------------------------------------
                                                                                   

consensus_10843#5      ------------------------------------------------------------
consensus_10843#7      ------------------------------------------------------------
consensus_10843#6      ------------------------------------------------------------
consensus_10843#1      ------------------------------------------------------------
consensus_10843#0      AACTTTCCATACATAAACGATATAATTGAGATTATGGACCAATCAGTGTTAGATCACGAT 944
consensus_10843#3      ------------------------------------------------------------
consensus_10843#4      ------------------------------------------------------------
consensus_10843#2      ------------------------------------------------------------
                                                                                   

consensus_10843#5      ------------------------------------------------------------
consensus_10843#7      ------------------------------------------------------------
consensus_10843#6      ------------------------------------------------------------
consensus_10843#1      ------------------------------------------------------------
consensus_10843#0      TGAAAACCTGAAAGCATTTCTGAAGAGTCTTTAACTAGGATAAAACGGTCGTCCAGTGCT 1004
consensus_10843#3      ------------------------------------------------------------
consensus_10843#4      ------------------------------------------------------------
consensus_10843#2      ------------------------------------------------------------
                                                                                   

consensus_10843#5      ------------------------------------------------------------
consensus_10843#7      ------------------------------------------------------------
consensus_10843#6      ------------------------------------------------------------
consensus_10843#1      ------------------------------------------------------------
consensus_10843#0      TCCACGCTTCATTGACGGTCTAACATTGATCGGTTTATGATCTCAATTGAAACTCAACCA 1064
consensus_10843#3      ------------------------------------------------------------
consensus_10843#4      ------------------------------------------------------------
consensus_10843#2      ------------------------------------------------------------
                                                                                   

consensus_10843#5      --------------------------------------
consensus_10843#7      --------------------------------------
consensus_10843#6      --------------------------------------
consensus_10843#1      --------------------------------------
consensus_10843#0      TCTCCACAACCCTATTCTAATAAACAATATAATTTAAT 1102
consensus_10843#3      --------------------------------------
consensus_10843#4      --------------------------------------
consensus_10843#2      --------------------------------------