cluster # 10844

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Schistosoma mansoni
cluster # 10844 cluster # 10844 Sequences # 23 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10844#0 length = 1033 sequences # 20

consensus_10844#1 length = 520 sequences # 2
consensus_10844#2 length = 441 sequences # 1

consensusID : consensus_10844#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 20
consensus length = 1033
fasta sequence

                              [CAATCTCATTCTTTTGTATAACGTAATAGTGAAAAAGTGCTCAAGAGACCTTTCACTCATGGTTTTCA-TTTTACTAAAAAGATATTTTTTTTGAACAGTAGACATTAATAATCCAGCAAAGGCAAGAATGTATACACGAAAATCAAATAGACTAAAAAACATTAATTGTCTTATTTTCTAAAATATCCTGATACTTACAACCATTCATTTCAGGTTTTCGTTTATCATCTCGACTCAAATTTTCATTGTGTTTACCTTCTTTAGCTAGGAAAGCATTGACTAGCTTATGTTCAGTTTGTTTTGTATGAGGATGGAAACTTTAATTGAAAAAGACAAAAACAAAATTAAATGGAATAATAAATCATTACTGTAGCATTAAAAATGTTATGGGATAATGAAAACCAGACAAAATATTTCACCATACATTGAATGTACTGATAAGAAGTACTATTATTAATGAATAATAACATTTGTGAAATCCAGGTGCACCTGGATGACGATAAAAGAAAACTGATAGAAGCCTTGAATAAGGAAGAAAATCAACTATGTATTGATTTCCAACGTGCTCTAAACGAAGAGAACACATTGTTAAAGTTTACAGATGAGGAATTGACTGGATGTCCTGCTGATTTCATTGATGGTTTGAAAAAGCTCCCTTCTGGCAAACGTGAAGTATCTCTCAAATATCCACACTACTTCCCGATCATGCAAAAAGCATCTAATCCAGAAACAAGGAGAACATTAGAAACAGCTTTTAATTCGAGGTGTATTAAAGAAAATACACCCATACTGAAACGTTTAATGGAACTTCGGAGAGAACGTGCATCAATCCTTGGTTTTCCTACACATGCTGATTTTATGCTTGATTTACGTATGGCTAAAACTGCTGCCAATGTTGATAAATTTTTAAATAACGTTGGGACTAAATTAAAGGAAGCTGAAGTAAAAGAGACTGCACGTTTATTGGAATTG-AAAAAAGAAGAGTGTGATCGTTTAGGATACACGTTTAATAATTGCTTAAATCCATGGGATA]

[+] EMBL CD124984             [CAATCTCATTCTTTTGTATAACGTAATAGTGAAAAAGTGCTCAAGAGACCTTTCACTCATGGTTTTCATTTTTACTAAAAAGATATTTTTTTTGAACAGTAGACATTAATAATCCAGCAAAGGCAAGAATGTATACACGAAAATCAAATAGACTAAAAAACATTAATTGTCTTATTTTCTAAAATATCCTGATACTTACAACCATTCATTTCAGGTTTTCGTTTATCATCTCGACTCAAATTTTCATTGTGTTTACCTTCTTTAGCTAGGAAAGCATTGACTAGCTTATGTTCAGTTTGTTTTGTATGAGGATGGAAACTTTAATTGAAAAAGACAAAAACAAAATTAAATGGAATAATAAATCATTACTGTAGCATTAAAAATGTTATGGGATAATGAAAACCAGACAAAATATTTTACCATACATTGAATGTACTGATAAGAAGTACTATTATTAATGAATAATAACATTTGTGAAATCCAGGTGCACCTGGATGACGATAAAAGAAAACTGATAGAAGCCTTGAATAAGGAAGAAAATCAACTATGTATTGATTTCCAACGTGCTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD125024             [CAATCTCATTCTTTTGTATAACGTAATAGTGAAAAAGTGCTCAAGAGACCTTTCACTCATGGTTTTCA TTTTACTAAAAAGATATTTTTTTTGAACAGTAGACATTAATAATCCAGCAAAGGCAAGAATGTATACACGAAAATCAAATAGACTAAAAAACATTAATTGTCTTATTTTCTAAAATATCCTGATACTTACAACCATTCATTTCAGGTTTTCGTTTATCATCTCGACTCAAATTTTCATTGTGTTTACCTTCTTTAGCTAGGAAAGCATTGACTAGCTTATGTTCAGTTTGTTTTGTATGAGGATGGAAACTTTAATTGAAAAAGACAAAAACAAAATTAAATGGAATAATAAATCATTACTGTAGCATTAAAAATGTTATGGGATAATGAAAACCAGACAAATTATTTCACCATACATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD124903             [CAATCTCATTCTTTTGTATAACGTAATAGTGAAAAAGTGCTCAAGAGACCTTTCACTCATGGTTTTCA TTTTACTAAAAAGATATTTTTTTTGAACAGTAGACATTAATAATCCAGCAAAGGCAAGAATGTATACACGAAAATCAAATAGACTAAAAAACATTAATTGTCTTATTTTCTAAAATATCCTGATACTTACAACCATTCATTTCAGGTTTTCGTTTATCATCTCGACTCAAATTTTCATTGTGTTTACCTTCTTTAGCTAGGAAAGCATTGACTAGCTTATGTTCAGTTTGTTTTGTATGAGGATGGAAACTTTAATTGAAAAAGACAAAAACAAAATTAAATGGAATAATAAATCATTACTGTAGCATTAAAAATGTTATGGGATAATGAAAACCAGACAAAATATTTTACCATACATTGAATGTACTGATAAGAAGTACTATTATTAATGAATAATAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD124949             [CAATCTCATTCTTTTGTATAACGTAATAGTGAAAAAGTGCTCAAGAGACCTTTCACTCATGGTTTTCA TTTTACTAAAAAGATATTTTTTTTGAACAGTAGACATTAATAATCCAGCAAAGGCAAGAATGTATACACGAAAATCAAATAGACTAAAAAACATTAATTGTCTTATTTTCTAAAATATCCTGATACTTACAACCATTCATTTCAGGTTTTCGTTTATCATCTCGACTCAAATTTTCATTGTGTTTACCTTCTTTAGCTAGGAAAGCATTGACTAGCTTATGTTCAGTTTGTTTTGTATGAGGATGGAAACTTTAATTGAAAAAGACAAAAACAAAATTAAATGGAATAATAAATCATTACTGTAGCATTAAAAATGTTATGGGATAATGAAAACCAGACAAAATATTTCACCATACATTGAATGTACTGATAAGAAGTACTATTATTAATGAATAATAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD125017             [CAATCTCATTCTTTTGTATAACGTAATAGTGAAAAAGTGCTCAAGAGACCTTTCACTCATGGTTTTCA TTTTACTAAAAAGATATTTTTTTTGAACAGTAGACATTAATAATCCAGCAAAGGCAAGAATGTATACACGAAAATCAAATAGACTAAAAAACATTAATTGTCTTATTTTCTAAAATATCCTGATACTTACAACCATTCATTTCAGGTTTTCGTTTATCATCTCGACTCAAATTTTCATTGTGTTTACCTTCTTTAGCTAGGAAAGCATTGACTAGCTTATGTTCAGTTTGTTTTGTATGAGGATGGAAACTTTAATTGAAAAAGACAAAAACAAAATTAAATGGAATAATAAATCATTACTGTAGCATTAAAAATGTTATGGGATAATGAAAACCAGACAAATTATTTCACCATACATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD124884             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AGAAAACTGATAGAAGCCTTGAATAAGGAAGAAAATCAACTATGTATTGATTTCCAACGTGCTCTAAACGAAGAGAACACATTGTTAAAGTTTACAGATGAGGAATTGACTGGATGTCCTGCTGATTTCATTGATGGTTTGAAAAAGCTCCCTTCTGGCAAACGTGAAGTATCTCTCAAATATCCACACTACTTCCCGATCATGCAA                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD182028             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AGAAAACTGATAGAAGCCTTGAATAAGGAAGAAAATCAACTATGTATTGATTTCCAACGTGCTCTAAACGAAGAGAACACTTTGTTAAAGTTTACAGATGAGGAATTGACTGGATGTCCTGCTGATTTCATTGATGGTTTGAAAAAGCTCCCTTCTGGCAAACGTGAAGTATCTCTCAAATATCCACACTACTTCCCGATCATGCAA                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD164203             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AGAAAACTGATAGAAGCCTTGAATAAGGAAGAAAATCAACTATGTATTGATTTCCAACGTGCTCTAAACGAAGAGAACACATTGTTAAAGTTTACAGATGAGGAATTGACTGGATGTCCTGCTGATTTCATTGATGGTTTGAAAAAGCTCCCTTCTGGCAAACGTGAAGTATCTCTCAAATATCCACACTACTTCCCGATCATGCAA                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CD124894             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GAAAACTGATAGAAGCCTTGATAAAGGAAGAAAATCAACTATGTATTGATTTCCAACGTGCTCTAAATGAAGAGAACACATTGTTAAAGTTTACAGATGAGGAATTGACTGGATGTCCTGCTGATTTCATTGATGGTTTGAAAAAGCTCCCTTCTGGCAAACGTGAAGTATCTCTCAAATATCCACACTACTTCCCGATCATGCAAAAAGCATCTAATCCAGAAACAAGGAGAACATTAGAAACAGGGCTTTA TCGAGGTGTATTAAAGAAAATACACCCATACTGGAACGTTTAATGGAACTTCGGAGAGAACGTGCACCAATCCTTGGTTTTCCTACACATGCTGATTTTATGCTTGATTTACGTATGGCTAAAACTGCTGCCAATGTTGATAAATTTTTAAATAACGTTGGGACTAAATTAAAGGAAGCTGAAGTAAAAGAGACTGCACG TTATTGGAATCG AAAAAAGAAGAGTGTGATCGTTTAGGATACACGTTTAATA                     ]
[-] EMBL CD182174             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GAAAACTGATAGAAGCCTTGAATAAGGAAGAAAATCAACTATGTATTGATTTCCAACGTGCTCTAAATGAAGAGAACACATTGTTAAAGTTTACAGATGAGGAATTGACTGGATGTCCTGCTGATTTCATTGATGGCTTGAAAAAGCTCCCTTCTGGCAAACGTGAAGTATCTCTCAAATATCCACACTACTTCCCGATCATGCAAA                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD182186             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GAAAACTGATAGAAGCCTTGAATAAGGAAGAAAATCAACTATGTATTGATTTCCAACGTGCTCTAAATGAAGAGAACACATTGTTAAAGTTTACAGATGAGGAATTGACTGGATGTCCTGCTGATTTCATTGATGGTTTGAAAAAGCTCCCTTCTGGCAAACGTGAAGTATCTCTCAAATATCCACACTACTTCCCGATCATGCAAAAAGCATCTAATCCAGgga                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD164148             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GAAAACTGATAGAAGCCTTGAATAAGGAAGAAAATCAACTATGTATTGATTTCCAACGTGCTCTAAACGAAGAGAACACATTGTTAAAGTTTACAGATGAGGAATTGACTGGATGTCCTGCTGATTTCATTGATGGTTTGAAAAAGCTCCCTTCTGGCAAACGTGAAGTATCTCTCAAATATCCACACTACTTCCCGATCATGCAAA                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD181934             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GAAAACTGATAGAAGCCTTGAATAAGGAAGAAAATCAACTATGTATTGATTTCCAACGTGCTCTAAACGAAGAGAACACATTGTTAAAGTTTACAGATGAGGAATTGACTGGATGTCCTGCTGATTTCATTGATGGTTTGAAAAAGCTCCCTTCTGGCAAACGTGAAGTATCTCTCAAATATCCACACTACTTCCCGATCATGCAAA                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD182185             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GAAAACTGATAGAAGCCTTGAATAAGGAAGAAAATCAACTATGTATTGATTTCCAACGTGCTCTAAACGAAGAGAACACATTGTTAAAGTTTACAGATGAGGAATTGACTGGATGTCCTGCTGATTTCATTGATGGTTTGAAAAAGCTCCCTTCTGGCAAACGTGAAGTATCTCTCAAATATCCACACTACTTCCCGATCATGCAAA                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD093307             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GAAAACTGATAGAAGCCTTGAATAAGGAAGAAAATCAACTATGTATTGATTTCCAACGTGCTCTAAATGAAGAGAACACATTGTTAAAGTTTACAGATGAGGAATTGACTGGATGTCCTGCTGATTTCATTGATGGTTTGAAAAAGCTCCCTTCTGGCAAACGTGAAGTATCTCTCAAATATCCACACTACTTCCCGATCATGCAAA                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD182112             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GAAAACTGATAGAAGCCTTGAATAAGGAAGAAAATCAACTATGTATTGATTTCCAACGTGCTCTAAATGAAGAGAACACATTGTTAAAGTTTACAGATGAGGAATTGACTGGATGTCCTGCTGATTTCATTGATGGTTTGAAAAAGCTCCCTTCTGGCAAACGTGAAGTATCTCTCAAATATCCACACTACTTCCCGATCATGCAAA                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD182120             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GAAAACTGATAGAAGCCTTGAATAAGGAAGAAAATCAACTATGTATTGATTTCCAACGTGCTCTAAATGAAGAGAACACATTGTTAAAGTTTACAGATGAGGAATTGACTGGATGTCCTGCTGATTTCATTGATGGTTTGAAAAAGCTCCCTTCTGGCAAACGTGAAGTATCTCTCAAATAT CACACTACTTCCCGATCATGCAAA                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD138508             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AAAACTGATAGAAGCC TGAATAAGGAAGAAAATCAACTATGTATTGATTTCCAACGTGCTCTAAACGAAGAGAACACATTGTTAAAGTTTACAGATGAGGAATTGACTGGATGTCCTGCTGATTTCATTGATGGTTTGAAAAAGCTCCCTTCTGGCAAACGTGAAGTATCTCTCAAATATCCACACTACTTCCCGATCATGCAAA                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD181579             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGAAAAAGCTCCCTTCTGGCAAACGTGAAGTATCTCTCAAATATCCACACTACTTCCCGATCATGCAAAAAGCATCTAATCCAGAAACAAGGAGAACATTAGAAACAGCTTTTAATTCGAGGTGTATTAAAGAAAATACACCCATACTGAAACGTTTAATGGAACTTCGGAGAGAACGTGCATCAATCCTTGGTTTTCCTACACATGCTGATTTTATGCTTGATTTACGTATGGCTAAAACTGCTGCCAATGTTGATAAATTTTTAAATAACGTTGGGACTAAATTAAAGGAAGCTGAAGTAAAAGAGACTGCACGTTTATTGGAATTGAAAAAAAGAAGAGTGTGATCGTTTAGGATACACGTTTAATAATTGCTT              ]
[+] EMBL CD136879             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AAGGAGAACATTAGAAACAGCTTTTAATTCGAGGCGTATTAAAGAAAATACACCCATACTGAAACGTCTAATGGAACTTCGGAGAGAACGTGCATCAATCCTTGGTTTTCCTACACATGCTGATTTTATGCTTGATTTACGTATGGCTAAAACTGCTGCCAATGTTGATAAATTTTTAAATAACGTTGGGACTAAATTAAAGGAAGCTGAAGTAAAAGAGACTGCACGTTTATTGGAATTG AAAAAAGAAGAGTGTGATCGTTTAGGATACACGTTTAATAATTGCTTAAATCCATGGGATA]




>consensus_10844#0
CAATCTCATTCTTTTGTATAACGTAATAGTGAAAAAGTGCTCAAGAGACCTTTCACTCAT
GGTTTTCATTTTACTAAAAAGATATTTTTTTTGAACAGTAGACATTAATAATCCAGCAAA
GGCAAGAATGTATACACGAAAATCAAATAGACTAAAAAACATTAATTGTCTTATTTTCTA
AAATATCCTGATACTTACAACCATTCATTTCAGGTTTTCGTTTATCATCTCGACTCAAAT
TTTCATTGTGTTTACCTTCTTTAGCTAGGAAAGCATTGACTAGCTTATGTTCAGTTTGTT
TTGTATGAGGATGGAAACTTTAATTGAAAAAGACAAAAACAAAATTAAATGGAATAATAA
ATCATTACTGTAGCATTAAAAATGTTATGGGATAATGAAAACCAGACAAAATATTTCACC
ATACATTGAATGTACTGATAAGAAGTACTATTATTAATGAATAATAACATTTGTGAAATC
CAGGTGCACCTGGATGACGATAAAAGAAAACTGATAGAAGCCTTGAATAAGGAAGAAAAT
CAACTATGTATTGATTTCCAACGTGCTCTAAACGAAGAGAACACATTGTTAAAGTTTACA
GATGAGGAATTGACTGGATGTCCTGCTGATTTCATTGATGGTTTGAAAAAGCTCCCTTCT
GGCAAACGTGAAGTATCTCTCAAATATCCACACTACTTCCCGATCATGCAAAAAGCATCT
AATCCAGAAACAAGGAGAACATTAGAAACAGCTTTTAATTCGAGGTGTATTAAAGAAAAT
ACACCCATACTGAAACGTTTAATGGAACTTCGGAGAGAACGTGCATCAATCCTTGGTTTT
CCTACACATGCTGATTTTATGCTTGATTTACGTATGGCTAAAACTGCTGCCAATGTTGAT
AAATTTTTAAATAACGTTGGGACTAAATTAAAGGAAGCTGAAGTAAAAGAGACTGCACGT
TTATTGGAATTGAAAAAAGAAGAGTGTGATCGTTTAGGATACACGTTTAATAATTGCTTA
AATCCATGGGATA

consensusID : consensus_10844#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 520
fasta sequence

                              [GAGATATCGTCAAAAGGACATCAGCTCTTATAAATTATGCTCGTTCAGTCTATGACAAAGTGGGGTCATCTAAACCTA-CTTTTGAGTCAGTGGTTTTGCCTATTTCTCTGTTCGAAGCTGAATATCAAACAGAAAGGAATGCCATCGATTTCCCTCAACACA-CTTTCCCTTGTAAAGCTATAAGAGATGCCAGTTGTGATGCCACTCGTAAA-CTTTCCGATGTTGAAGTAGAATTGGAAATGCGGAAGGA-CGTATTTGAAAAGTTTGTTTCTGTCCAAAAGAATATAGATTCATCATTCTCCGGTGAATATCGTCGTTATGTAGATAGAAAAGTTCAGCTCGGTCGGAGAAATGGTCTTCACCTGGATGACGATAAAAGAAAACTGATAGAAGCCTTGAATAAGGAAGAAAATCAACTATGTATTGATTTCCAACGTGCTCTAAACGAAGAGAACACATTGTTAAAGTTTACAGATGANGAATTGACTGGATGTCCTGCTGATTTCATTGATGGTTTGAA]

[+] EMBL AI976295             [GAGATATCGTCAAAAGGACATCAGCTCTTATAAATTATGCTCGTTCAGTCTATGACAAAGTGGGGTCATCTAAACCTA CTTTTGAGTCAGTGGTTTTGCCTATTTCTCTGTTCGAAGCTGAATATCAAACAGAAAGGAATGCCATCGATTTCCCTCAACACA CTTTCCCTTGTAAAGCTATAAGAGATGCCAGTTGTGATGCCACTCGTAAA CTTTCCGATGTTGAAGTAGAATTGGAAATGCGGAAGGA CGTATTTGAAAAGTTTGTTTCTGTCCAAAAGAATATAGATTCATCATTCTCCGGTGAATATCGTCGTTATGTAGATAGAAAAGTTCAGCTCGGTCGGAGAAATGGTCTTCACCTGGATGACGATAAAAGAAAACTGATAGAAGCCTTGAATAAGGAAGAAAATCAACTATGTATTGATTTCCAACGTGCTCTAAACGAAGAGAACACATTGTTAAAGTTTACAGATGANGAATTGACTGGATGTCCTGCTGATTTCATTGA         ]
[+] EMBL BF936662             [                                                       CAAAGTGGGGTCATCTAAACCTACCTTTTGAGTCAGTGGTTTTGCCTATTTCTCTGTTCGAAGCTGAATATCAAACAGAAAGGAATGCCATCGATTTCCCTCAACACACCTTTCCCTTGTAAAGCTATAAGAGATGCCAGTTGTGATGCCACTCGTAAACCTTTCCGATGTTGAAGTAGAATTGGAAATGCGGAAGGACCGTATTTGAAAAGTTTGTTTCTGTCCAAAAGAATATAGATTCATCATTCTCCGGTGAATATCGTCGTTATGTAGATAGAAAAGTTCAGCTCGGTCGGAGAAATGGTCTTCACCTGGATGACGATAAAAGAAAACTGATAGAAGCCTTGAATAAGGAAGAAAATCAACTATGTATTGATTTCCAACGTGCTCTAAACGAAGAGAACACATTGTTAAAGTTTACAGATGAGGAATTGACTGGATGTCCTGCTGA TTCATTGATGGTTTGAA]




>consensus_10844#1
GAGATATCGTCAAAAGGACATCAGCTCTTATAAATTATGCTCGTTCAGTCTATGACAAAG
TGGGGTCATCTAAACCTACTTTTGAGTCAGTGGTTTTGCCTATTTCTCTGTTCGAAGCTG
AATATCAAACAGAAAGGAATGCCATCGATTTCCCTCAACACACTTTCCCTTGTAAAGCTA
TAAGAGATGCCAGTTGTGATGCCACTCGTAAACTTTCCGATGTTGAAGTAGAATTGGAAA
TGCGGAAGGACGTATTTGAAAAGTTTGTTTCTGTCCAAAAGAATATAGATTCATCATTCT
CCGGTGAATATCGTCGTTATGTAGATAGAAAAGTTCAGCTCGGTCGGAGAAATGGTCTTC
ACCTGGATGACGATAAAAGAAAACTGATAGAAGCCTTGAATAAGGAAGAAAATCAACTAT
GTATTGATTTCCAACGTGCTCTAAACGAAGAGAACACATTGTTAAAGTTTACAGATGANG
AATTGACTGGATGTCCTGCTGATTTCATTGATGGTTTGAA

consensusID : consensus_10844#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 441
fasta sequence

                              [TGATGTCACAGACTGTTTAGAAGAAATGGGAATGCAGAAAATTGTTCAATGTCATTTAACAAAGAAAAACTGTGATCCAGAACTAGCTGAACAATTAAATTTATATGAAGCAAGTCTACGATATGAGGATGGTGAAGATTTCGATGAATTACCTTTACCGGCTAGTGGTCGTGAAAGTTTACGTCAAGGTAGACGTATGAGTAGAGTACAATTTATGAAAACACCACAAGGTGAAGCATTATTATCATCTATGCATGCCTTACCAACTAGTCAGTCAATGGCTAGTGATATGGATAGAATGCTCAGTCGGAAGTCCAAGCGTTTTCAATCAGTAGAAAATTTACAAAATAGTGGTTTATCAAAAAGTGTTACAAATACAAATTTCCATCCTCATACAAAACAAACTGAACATAAGCTAGTCAATGCTTTCCTAGCTAAAGA]

[+] EMBL CD066944             [TGATGTCACAGACTGTTTAGAAGAAATGGGAATGCAGAAAATTGTTCAATGTCATTTAACAAAGAAAAACTGTGATCCAGAACTAGCTGAACAATTAAATTTATATGAAGCAAGTCTACGATATGAGGATGGTGAAGATTTCGATGAATTACCTTTACCGGCTAGTGGTCGTGAAAGTTTACGTCAAGGTAGACGTATGAGTAGAGTACAATTTATGAAAACACCACAAGGTGAAGCATTATTATCATCTATGCATGCCTTACCAACTAGTCAGTCAATGGCTAGTGATATGGATAGAATGCTCAGTCGGAAGTCCAAGCGTTTTCAATCAGTAGAAAATTTACAAAATAGTGGTTTATCAAAAAGTGTTACAAATACAAATTTCCATCCTCATACAAAACAAACTGAACATAAGCTAGTCAATGCTTTCCTAGCTAAAGA]




>consensus_10844#2
TGATGTCACAGACTGTTTAGAAGAAATGGGAATGCAGAAAATTGTTCAATGTCATTTAAC
AAAGAAAAACTGTGATCCAGAACTAGCTGAACAATTAAATTTATATGAAGCAAGTCTACG
ATATGAGGATGGTGAAGATTTCGATGAATTACCTTTACCGGCTAGTGGTCGTGAAAGTTT
ACGTCAAGGTAGACGTATGAGTAGAGTACAATTTATGAAAACACCACAAGGTGAAGCATT
ATTATCATCTATGCATGCCTTACCAACTAGTCAGTCAATGGCTAGTGATATGGATAGAAT
GCTCAGTCGGAAGTCCAAGCGTTTTCAATCAGTAGAAAATTTACAAAATAGTGGTTTATC
AAAAAGTGTTACAAATACAAATTTCCATCCTCATACAAAACAAACTGAACATAAGCTAGT
CAATGCTTTCCTAGCTAAAGA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10844#0      CAATCTCATTCTTTTGTATAACGTAATAGTGAAAAAGTGCTCAAGAGACCTTTCACTCAT 60
consensus_10844#1      ------------------------------------------------------------
consensus_10844#2      ------------------------------------------------------------
                                                                                   

consensus_10844#0      GGTTTTCATTTTACTAAAAAGATATTTTTTTTGAACAGTAGACATTAATAATCCAGCAAA 120
consensus_10844#1      ------------------------------------------------------------
consensus_10844#2      ------------------------------------------------------------
                                                                                   

consensus_10844#0      GGCAAGAATGTATACACGAAAATCAAATAGACTAAAAAACATTAATTGTCTTATTTTCTA 180
consensus_10844#1      -GAGATATCGT-CAAAAGGACATCAGCT---CTTATAAATTATGCTCGTTCAGTCTATGA 55
consensus_10844#2      ----------------------------------------------------------TG 2
                                                                                   

consensus_10844#0      AAATATCCTGATACTTACAACCATTCATT--TCAG-GTTTTCGTTTATCATCTCGACTCA 237
consensus_10844#1      CAAAGTGGGGTCATCTAAACCTACTTTTGAGTCAGTGGTTTTGCCTATT-TCTCTGTTCG 114
consensus_10844#2      ATGTCACAGACTGTTTAGAAGAAATGGGAATGCAG-AAAATTGTTCAATGTCATTTAACA 61
                                      ** *   * *       ***     * *   *   **      * 

consensus_10844#0      AATTTTCATTGTGTTTACCTTCTTTAGCTAGGAAAGC-ATTGA-CTAGCTTATGTTCAGT 295
consensus_10844#1      AAGCTGAA---TATCAAAC------AGAAAGGAATGCCATCGA-TTTCCCTCAACACACT 164
consensus_10844#2      AAGAAAAACTGTGATCCAG------AACTAGCTGAACAATTAAATTTATATGAAGCAAGT 115
                       **     *   *             *   **     * **  *  *    *      * *

consensus_10844#0      TTGTTTTGTATGAGGATGGAAACTTTAATTGAAAAAGACAAAAACAAAATTA--AATGGA 353
consensus_10844#1      TTCCCTTGTAAAGCTATAAGAGATGCCAGTTGTGATGCCACTCGTAAACTTTCCGATGTT 224
consensus_10844#2      CTACGATATGAGGATGGTGAAGATTTCGATG--AATTACCTTTACCGGCTAGTGGTCGTG 173
                        *    * *           *  *     *    *   *          *       *  

consensus_10844#0      ATAATA-AATCATTACTGTAGCATTAAAAATGTTATG-GGATAATGAAAACCAGACAAAA 411
consensus_10844#1      GAAGTAGAATTGGAAATGCGGAAGGACGTATTTGAAA-AGTTTGTTTCTGTCCAAAAGAA 283
consensus_10844#2      AAAGTTTA--CGTCAAGGTAGACGTATGAGTAGAGTACAATTTATGAAAACACCACAAGG 231
                         * *  *      *  *  *    *    *          *  *         * *   

consensus_10844#0      TAT---TTCACCATACATTGA-ATGTACTGATAAGAAGTACTATTATT-AATGAATAATA 466
consensus_10844#1      TATAGATTCATCATTCTCCGGTGAATATCGTCGTTATGTA--GATAGA-AAAGTTCAGCT 340
consensus_10844#2      TGAAGCATTATTAT-CATCTATGCATGCC-TTACCAACTA--GTCAGTCAATGGCTAGTG 287
                       *      * *  ** *         *         *  **     *   ** *   *   

consensus_10844#0      ACATTTGTGAAATCCAGGTGCACCTGGATGACGATAAAAGAAAACTGATAGAAGCCTTGA 526
consensus_10844#1      CGGTCGGAGAAATG-GTCTTCACCTGGATGACGATAAAAGAAAACTGATAGAAGCCTTGA 399
consensus_10844#2      ATATGGATAGAATG----CTCAGTCGGAAGTC----------------CAAGCGTTTTCA 327
                          *      ***       **   *** * *                 *   *  ** *

consensus_10844#0      ATAAGGAAGAAAATCAACTATGTATTGATTT-CCAACGTGCTCTAAACGAAGAGAACACA 585
consensus_10844#1      ATAAGGAAGAAAATCAACTATGTATTGATTT-CCAACGTGCTCTAAACGAAGAGAACACA 458
consensus_10844#2      ATCAGTA-GAAAATTTACAAAATAGTGGTTTATCAAAAAGTGTTACA-----AATACAAA 381
                       ** ** * ******  ** *  ** ** ***  ***   *   ** *     *  *** *

consensus_10844#0      TTGTTAAAGTTTACAGATGAGGAATTGACTGGATGTCCTGCTGATTTCATTGATGGTTTG 645
consensus_10844#1      TTGTTAAAGTTTACAGATGANGAATTGACTGGATGTCCTGCTGATTTCATTGATGGTTTG 518
consensus_10844#2      TT-TCCATCCTCATACAAAACAAACTGAAC--ATAAGCTAGTCAATGCTTTCCTAGCTAA 438
                       ** *  *   * * * *  *  ** ***    **   **  * * * * **  * * *  

consensus_10844#0      AAAAAGCTCCCTTCTGGCAAACGTGAAGTATCTCTCAAATATCCACACTACTTCCCGATC 705
consensus_10844#1      AA---------------------------------------------------------- 520
consensus_10844#2      AGA--------------------------------------------------------- 441
                       *                                                           

consensus_10844#0      ATGCAAAAAGCATCTAATCCAGAAACAAGGAGAACATTAGAAACAGCTTTTAATTCGAGG 765
consensus_10844#1      ------------------------------------------------------------
consensus_10844#2      ------------------------------------------------------------
                                                                                   

consensus_10844#0      TGTATTAAAGAAAATACACCCATACTGAAACGTTTAATGGAACTTCGGAGAGAACGTGCA 825
consensus_10844#1      ------------------------------------------------------------
consensus_10844#2      ------------------------------------------------------------
                                                                                   

consensus_10844#0      TCAATCCTTGGTTTTCCTACACATGCTGATTTTATGCTTGATTTACGTATGGCTAAAACT 885
consensus_10844#1      ------------------------------------------------------------
consensus_10844#2      ------------------------------------------------------------
                                                                                   

consensus_10844#0      GCTGCCAATGTTGATAAATTTTTAAATAACGTTGGGACTAAATTAAAGGAAGCTGAAGTA 945
consensus_10844#1      ------------------------------------------------------------
consensus_10844#2      ------------------------------------------------------------
                                                                                   

consensus_10844#0      AAAGAGACTGCACGTTTATTGGAATTGAAAAAAGAAGAGTGTGATCGTTTAGGATACACG 1005
consensus_10844#1      ------------------------------------------------------------
consensus_10844#2      ------------------------------------------------------------
                                                                                   

consensus_10844#0      TTTAATAATTGCTTAAATCCATGGGATA 1033
consensus_10844#1      ----------------------------
consensus_10844#2      ----------------------------