cluster # 10845

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Schistosoma mansoni
cluster # 10845 cluster # 10845 Sequences # 23 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10845#0 length = 586 sequences # 3
consensus_10845#1 length = 579 sequences # 17

consensus_10845#2 length = 318 sequences # 1
consensus_10845#3 length = 284 sequences # 1
consensus_10845#4 length = 239 sequences # 1

consensusID : consensus_10845#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 586
fasta sequence

                              [TCGATTTGAAGGTCAAGTGAACGTAGTACTGGGATTTTTGGCCCTATGCTAGAGTTTCAGTCTTCCAGCCACCATATGGGTTCTGTCCTCTTAGAAGGTCATATCTCTGACAATGGACAATATACTGGTGACAGTTTGACGTTACTTGATGAACCCATTCGTGATACAATTTTTAGATCAGCCCGCGCCGTTGGTCAAAAGTTTGCTTACGTTCTAGTCCCACGCCAAGGACAGGGGTTGTTGAAAGAATGTAGGTGATCCTCTGATATTAATTCTTTATTTCAGGGGATTTGTGGGGTCCGTTAGTGTTGTGTCTTATCATGTCAGCGCTCTTACATAGCAGCTCAAACTCAGAAAGTTTTGGACATGGCGGACCAGAGTTTGCCCAGGTCTTCGTTATTTTCTGGTTGGGTTCGGCAGTTGTGACTTTGAATTCTAAATTACTCGGTGGCGCAGTGTCATTCCTACAAACCGTATGCGTCTTGGGGTATTGTATTTTGCCTCTTGNTATTGGCTTGGTTATATGTCGATTACTGGTGCTTGCAAGTTCTAATTCTGTGTTTGNTTTCATCATACGACTATTCAT]

[+] EMBL CD078455             [TCGATTTGAAGGTCAAGTGAACGTAGTACTGGGATTTTTGGCCCTATGCTAGAGTTTCAGTCTTCCAGCCACCATATGGGTTCTGTCCTCTTAGAAGGTCATATCTCTGACAATGGACAATATACTGGTGACAGTTTGACGTTACTTGATGAACCCATTCGTGATACAATTTTTAGATCAGCCCGCGCCGTTGGTCAAAAGTTTGCTTACGTTCTAGTCCCACGCCAAGGACAGGGGTTGTTGAAAGAATGTAGGTGATCCTCTGATATTAATTCTTTATTTCAGGGGATTTGTGGGGTCCGTTAGTGTTGTGTCTTATCATGTCAGCGCTCTTACATAGCAGCTCAAACTCAGAAAGTTTTGGACATGGCGGACCAGAGTTTGCCCAGGTCTTCGTTATTTTCTGGTTGGGTTCGGCAGTTGTGACTTTGAATTCTAAATTACTCGGTGGCGCAGTGTCATTCCTACAAACCGTATGCGTCTTGGGGTATTGTATTTTGCCTCTTGNTATTGGCTTGGTTATATGTCGATTACTGGTGCTTGCAAGTTCT                                   ]
[+] EMBL CD078386             [             CAAGTGAGCGTAGTACTGGGATTTTTGGCCCTATGCTAGAGTTTCAGTCTTCCAGCCACCATATGGGTTCTGTCCTCTTAGAAGGTCATATCTCTGACAATGGACAATATACTGGTGACAGTTTGACGTTACTTGATGAACCCATTCGTGATACAATTTTTAGATCAGCCCGCGCCGTTGGTCAAAAGTTTGCTTACGTTCTAGTCCCACGCCAAGGACAGGGGTTGTTGAAAGAATGTAGGTGATCCTCTGATATTAATTCTTTATTTCAGGGGATTTGTGGGGTCCGTTAGTGTTGTGTCTTATCATGTCAGCGCTCTTACATAGCAGCTCAAACTCAGAAAGTTTTGGACATGGCGGACCAGAGTTTGCCCAGGTCTTCGTTATTTTCTGGTTGGGTTCGGCAGTTGTGACTTTGAATTCTAAATTACTCGGTGGCGCAGTGTCATTCCTACAAACCGTATGCGTCTTGGGGTATTGTATTTTGCCTCTTGTTATTGGCTTGGTTATATGTCGATTACTGTTGCTTGNCAGTTCTAATTCTGTGTTTGNTTTCATCATACGACTATTCAT]
[+] EMBL CD183858             [                                                                                                                                                                                                                                            GTTGTTGAAAGAATGTAGGTGATCCTCTGATATTAATTCTTTATTTCATGGGATTTGTGGGGTCCGTTAGTGTTGTGTCTTATCATGTCAGCGCTCTTACATAGCATTTTAAACTCAGAAAGTTTTGGACATGGCGGACCAGAGTTTGCCCAGGTCTTCGTTATTTTCTGGTTGGGTTCGGCAGTTGTGACTTTGAATTCTAAATTACTCGGTGGCGCAGTGTCATTCCTACAAACCGTATGCGTCTTGGGGTATTGTATTTTGC                                                                                     ]




>consensus_10845#0
TCGATTTGAAGGTCAAGTGAACGTAGTACTGGGATTTTTGGCCCTATGCTAGAGTTTCAG
TCTTCCAGCCACCATATGGGTTCTGTCCTCTTAGAAGGTCATATCTCTGACAATGGACAA
TATACTGGTGACAGTTTGACGTTACTTGATGAACCCATTCGTGATACAATTTTTAGATCA
GCCCGCGCCGTTGGTCAAAAGTTTGCTTACGTTCTAGTCCCACGCCAAGGACAGGGGTTG
TTGAAAGAATGTAGGTGATCCTCTGATATTAATTCTTTATTTCAGGGGATTTGTGGGGTC
CGTTAGTGTTGTGTCTTATCATGTCAGCGCTCTTACATAGCAGCTCAAACTCAGAAAGTT
TTGGACATGGCGGACCAGAGTTTGCCCAGGTCTTCGTTATTTTCTGGTTGGGTTCGGCAG
TTGTGACTTTGAATTCTAAATTACTCGGTGGCGCAGTGTCATTCCTACAAACCGTATGCG
TCTTGGGGTATTGTATTTTGCCTCTTGNTATTGGCTTGGTTATATGTCGATTACTGGTGC
TTGCAAGTTCTAATTCTGTGTTTGNTTTCATCATACGACTATTCAT

consensusID : consensus_10845#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 17
consensus length = 579
fasta sequence

                              [GGACAGGGGTTGTTGAAAGAATGGGATTTGAAGGTCAAGTGAGCGTAGTACTGGGATTTTTGGCCCTATGCTAGAGTTTCAGTCTTCCAGCCACCATATGGGTTCTGTCCTCTTAGAAGGTCATATCTCTGACAATGGACAATATACTGGTGACAGTTTGACGTTACTTGATGAACCCATTCGTGATACAATTTTTAGATCAGCCCGCGCCGTTGGTCAAAAGTTTGCTTACGTTCTAGTCCCACGCCAAGGACAGGGGTTGTTGAAAGAATGGGATTTGTGGGGTCCGTTAGTGTTGTGTCTTATCATGTCAGCGCTCTTACATAGCAGCTCAAACTCAGAAAGTTTTGGACATGGCGGACCAGAGTTTGCCCAGGTCTTCGTTATTTTCTGGTTGGGTTCGGCAGTTGTGACTTTGAATTCTAAATTACTCGGTGGCGCAGTGTCATTCCTACAAACCGTATGCGTCTTGGGGTATTGTATTTTGCCTCTTGTTATTGGCTTGGTTATATGTCGATTACTGTTGCTTGCAAGTTCT-AATTCTGTGTTTGTTTTCATCATACGACTATTCATTGGTAT]

[+] EMBL CD183834             [GGACAGGGGTTGTTGAAAGAATGGGATTTGAAGGTCAAGTGAGCGTAGTACTGGGATTTTTGGCCCTATGCTAGAGTTTCAGTCTTCCAGCCACCATATGGGTTCTGTCCTCTTAGAAGGTCATATCTCTGACAATGGACAATATACTGGTGACAGTTTGACGTTACTTGATGAACCCATTCGTGATACAATTTTTAGATCAGCCCGCGCCGTTGGTCAAAAGTTTGCTTACGTTCTAGTCCCACGCCAAGGACAGGGGTTGTTGAAAGAATGGGATTTGTGGGGTCCGTTAGTGTTGTGTCTTATCATGTCAGCGCTCTTACATAGCAGCTCAAACTCAGAAAGTTTTGGACATGGCGGACCAGAGTTTGCCCAGGTCTTCGTTATTTTCTGGTTGGGTTCGGCAGTTGTGACTTTGAATTCTAAATTACTCGGTGGCGCAGTGTCATTCCTACAAACCGTATGCGTCTTGGGGTGTTGTATTTTGCCTCTTGTTATTGGCTT                                                                            ]
[+] EMBL CD156511             [                                     AGTGAGCGTAGTACTGGGATTTTTGGCCCTATGCTAGAGTTTCAGTCTTCCAGCCACCATATGGGTTCTGTCCTCTTAGAAGGTCATATCTCTGACAATGGACAATATACTGGTGACAGTTTGACGTTACTTGATGAACCCATTCGTGATACAATTTTTAGATCAGCCCGCGCCGTTGGTCAAAAGTTTGCTTACGTTCTAGTCCCACGCCAAGGACAGGGGTTGTTGAAAGAATGGGATTTGTGGGGTCCGTTAGTGTTGTGTCTTATCATGTCAGCGCTCTTACATAGCAGCTCAAACTCAGAAAGTTTTGGACATGGCGGACCAGAGTTTGCCCAGGTCTTCG                                                                                                                                                                                                     ]
[+] EMBL CD156051             [                                     AGTGAGCGTAGTACTGGGATTTTTGGCCCTATGCTAGAGTTTCAGTCTTCCAGCCACCATATGGGTTCTGTCCTCTTAGAAGGTCATATCTCTGACAATGGACAATATACTGGTGACAGTTTGACGTTACTTGATGAACCCATTCGTGATACAATTTTTAGATCAGCCCGCGCCGTTGGTCAAAAGTTTGCTTACGTTCTAGTCCCACGCCAAGGACAGGGGTTGTTGAAAGAATGGGATTTGTGGGGTCCGTTAGTGTTGTGTCTTATCATGTCAGCGCTCTTACATAGCAGCTCAAACTCAGAAAGTTTTGGACATGGCGGACCAGAGTTTGCCCAGGTCTTCG                                                                                                                                                                                                     ]
[+] EMBL CD083623             [                                              AGTACTGGGATTTTTGGCCCTATGCTAGAGTTTCAGTCTTCCAGCCACCATATGGGTTCTGTCCTCTTAGAAGGTCATATCTCTGACAATGGACAATATACTGGTGACAGTTTGACGTTACTTGATGAACCCATTCGTGATACAATTTTTAGATCAGCCCGCGCCGTTGGTCAAAAGTTTGCTTACGTTCTAGTCCCACGCCAAGGACAGGGGTTGTTGAAAGAATGGGATTTGTGGGGTCCGTTAGTGTTGTGTCTTATCATGTCAGCGCTCTTACATAGCAGCTCAAACTCAGAAAGTTTTGGACATGGCGGACCAGAGTTTGCCCAGGTCTTCGTTATTTTCTGGTTGGGTTCGGCAGTTGTGACTTTGAATTCTAAATTACTCGGTGGCGCAGTGTCATTCCTACAAACCGTATGCGTCTTGGGGTATTGTATTTTGCCTCTTGTTATTGGCTTGGTTATATGTCGATTACTGTTGCTTGCAAGTTCT AATTCTGTGT                               ]
[+] EMBL CD077896             [                                                     GGATTTTTGGCCCTATGCTAGAGTTTCAGTCTTCCAGCCACCATATGGGTTCTGTCCTCTTAGAAGGTCATATCTCTGACAATGGACAATATACTGGTGACAGTTTGACGTTACTTGATGAACCCATTCGTGATACAATTTTTAGATCAGCCCGCGCCGTTGGTCAAAAGTTTGCTTACGTTCTAGTCCCACGCCAAGGACAGGGGTTGTTGAAAGAA                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD078299             [                                                     GGATTTTTGGCCCTATGCTAAAGTTTCAGTCTTCCAGCCACCATATGGGTTCTGTCCTCTTAGAAGGTCATATCTATGACAATGGACAATATACTGGTGACAGTTTGACGATACTTGATGAACCCATTCGTGATACAATTTTTATATCAACCCGCGCCGTAGGTCAAAAGTTTGCTTACGTTCTAGTCCCACGCCAAGGACAGGGGATGTTGA                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD199692             [                                                               CCCTATGCTAGAGTTTCAGTCTTCCAGCCACCATATGGGTTCTGTCCTCTTAGAAGGTCATATCTCTGACAATGGACAATATACTGGTGACAGTTTGACGTTACTTGATGAACCCATTCGTGATACAATTTTTAGATCAGCCCGCGCCGTTGGTCAAAAGTTTGCTTACGTTCTAGTCCCACGCCAAGGACAGGGGTTGTTGAAAGAATGGGATTTGTGGGGTCCGTTAGTGTTGTGTCTTATCATGTCAGCGCTCTTACATAGCA                                                                                                                                                                                                                                                           ]
[+] EMBL AI975214             [                                                                      CTAGAGTTTCAGTCTTCCAGCCACCATATGGGTTCTGTCCTCTTAGAAGGTCATATCTCTGACAATGGACAATATACTGGTGACAGTTTGACGTTACTTGATGAACCCATTCGTGATACAATTTTTAGATCAGCCCGCGCCGTTGGTCAAAAGTTTGCTTACGTTCTAGTCCCACGCCAAGGACAGGGGTTGTTGAAAGAATGGGATTTGTGGGGTCCGTTAGTGTTGTGTCTTATCATGTCAGCGCTCTTACATAGCAGCTCAAACTCAGAAAGTTTTGGACATGGCGGACCAGAGTTTGCCCAGGTCTTCGTTATTTTCTGGTTGGGTTCGGCAGTTGTGACTTTGAATTCTAAATTACTCGGTGGCGCAGTGTCATTCCTACAAACCGTATGCGTCTTGGGGTATTGTATTTTGCCTCTTGTTATTGGCTTGGTTATATGTCGATTACTGTTGCTTTGAAGTTCTNAATTCTGTGTTTGTTTTCATCATACGACTATTCATTGGTAT]
[+] EMBL CD183811             [                                                                                                                                                                                                                                                                  GTTGTTGAAAGAATGGGATTTGTGGGGTCCGTTAGTGTTGTGTCTTATCATGTCAGCGCTCTTACATAGCAGCTCAAACTCAGAAAGTTTTGGACATGGCGGACCAGAGTTTGCCCAGGTCATCGTTATTTTCTGGTTGGGTTCGGCAGTTGTGACTTTGAATTCTAAATTACTCGGTGGCGCAGTGTCATTCCTACAAACCGTATGCGTCTTGGGGTATTGTATTTTGC                                                                                            ]
[+] EMBL CD130152             [                                                                                                                                                                                                                                                                  GTTGTTGAAAGAATGGGATTTGTGGGGTCCGTTAGTGTTGTGTCTTATCATGTCAGCGCTCTTACATAGCAGCTCAAACTCAGAAAGTTTTGGACATGGCGGACCAGAGTTTGCCCAGGTCTTCGTTATTTTCTGGTTGGGTTCGGCAGTTGTGACTTTGAATTCTAAATTACTCGGTGGCGCAGTGTCATTCCTACAAACCGTATGCGTCTTGGGGTATTGTATTTTGC                                                                                            ]
[+] EMBL CD165204             [                                                                                                                                                                                                                                                                  GTTGTTGAAAGAATGGGATTTGTGGGGTCCGTTAGTGTTGTGTCTTATCATGTCAGCGCTCTTACATAGCAGCTCAAACTCAGAAAGTTTTGGACATGGCGGACCAGAGTTTGCCCAGGTCTTCGTTATTTTCTGGTTGGGTTCGGCAGTTGTGACTTTGAATTCTAAATTACTCGGTGGCGCAGTGTCATTCCTACAAACCGTATGCGTCTTGGGGTATTGTATTTTGC                                                                                            ]
[+] EMBL CD165222             [                                                                                                                                                                                                                                                                  GTTGTTGAAAGAATGGGATTTGTGGGGTCCGTTAGTGTTGTGTCTTATCATGTCAGCGCTCTTACATAGCAGCTCAAACTCAGAAAGTTTTGGACATGGCGGACCAGAGTTTGCCCAGGTCTTCGTTATTTTCTGGTTGGGTTCGGCAGTTGTGACTTTGAATTCTAAATTACTCGGTGGCGCAGTGTCATTCCTACAAACCGTATGCGTCTTGGGGTATTGTATTTTGC                                                                                            ]
[+] EMBL CD183893             [                                                                                                                                                                                                                                                                  GTTGTTGAAAGAATGGGATTTGTGGGGTCCGTTAGTGTTGTGTCTTATCATGTCAGCGCTCTTACATAGCAGCTCAAACTCAGAAAGTTTTGGACATGGCGGACCAGAGTTTGCCCAGGTCTTCGTTATTTTCTGGTTGGGTTCGGCAGTTGTGACTTTGAATTCTAAATTACTCGGTGGCGCAGTGTCATTCCTACAAACCGTATGCGTCTTGGGGTATTGTATTTTGC                                                                                            ]
[+] EMBL CD183854             [                                                                                                                                                                                                                                                                  GTTGTTGAAAGAATGGGATTTGTGGGGTCCGTTAGTATTGTGTCTTATCATGTCAGCGCTCTTACACAGCAGCTCAAACTCAGAAAGTTTTGGACATGGCGGACCAGAGTTTGCCCAGGTCTTCGTTATTTTCTGGTTGGGTTCGGCAGTTGTGACTTTGAATTCTAAATTACTCGGTGGCGCAGTGTCATTCCTACAAACCGTATGCGTCTTGGGGTATTGTATTTTGC                                                                                            ]
[+] EMBL CD165188             [                                                                                                                                                                                                                                                                  GTTGTTGAAAGAATGGGATTTGTGGGGTCCGTTAGTGTTGTGTCTTATCATGTCAGCGCTCTTACATAGCAGCTCAAACTCAGAAAGTTTTGGACATGGCGGACCAGAGTTTGCCCAGGTCTTCGTTATTTTCTGGTTGGGTTCGACAGTTGTGACTTTGAATTCTAAATTACTCGGTGGCGCAGTGTCATTCCTACAAACCGTATGCGTCTTGGGGTATTGTATTTTGC                                                                                            ]
[+] EMBL CD183904             [                                                                                                                                                                                                                                                                  GTTGTTGAAAGAATGGGATTTGTGGGGTCCGTTAGTGTTGTGTCTTATCATGTCAGCGCTCTTACATAGCAGCTCAAACTCAGAAAGTTTTGGACATGGCGGACCAGAGTTTGCCCAGGTCTT                                                                                                                                                                                                       ]
[+] EMBL CD150671             [                                                                                                                                                                                                                                                                       TGAAAGAATGGGATTTGTGGGGTCCGTTAGTGTTGTGTCTTATCATGTCAGCGCTCTTACATAGCAGCTCAAACTCAGAAAGTTTTGGACATGGCGGACCAGAGTTTGCCCAGGTCTTCGTTATTTTCTGGTTGGGTTCGGCAGTTGTGACTTTGAATTCTAAATTACTCGGTGGCGCAGTGTCATT                                                                                                                                  ]




>consensus_10845#1
GGACAGGGGTTGTTGAAAGAATGGGATTTGAAGGTCAAGTGAGCGTAGTACTGGGATTTT
TGGCCCTATGCTAGAGTTTCAGTCTTCCAGCCACCATATGGGTTCTGTCCTCTTAGAAGG
TCATATCTCTGACAATGGACAATATACTGGTGACAGTTTGACGTTACTTGATGAACCCAT
TCGTGATACAATTTTTAGATCAGCCCGCGCCGTTGGTCAAAAGTTTGCTTACGTTCTAGT
CCCACGCCAAGGACAGGGGTTGTTGAAAGAATGGGATTTGTGGGGTCCGTTAGTGTTGTG
TCTTATCATGTCAGCGCTCTTACATAGCAGCTCAAACTCAGAAAGTTTTGGACATGGCGG
ACCAGAGTTTGCCCAGGTCTTCGTTATTTTCTGGTTGGGTTCGGCAGTTGTGACTTTGAA
TTCTAAATTACTCGGTGGCGCAGTGTCATTCCTACAAACCGTATGCGTCTTGGGGTATTG
TATTTTGCCTCTTGTTATTGGCTTGGTTATATGTCGATTACTGTTGCTTGCAAGTTCTAA
TTCTGTGTTTGTTTTCATCATACGACTATTCATTGGTAT

consensusID : consensus_10845#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 318
fasta sequence

                              [CTTCAAGGTCGAGTCGATTTGAAGGTCAAGTGAGCGTAGTACTGGGATTTTTGGCCCTATGCTAGAGTTTCAGTCTTCCAGCCACCATATGGGTTCTGTCCTCTTAGAAGGTCATATCTCTGACAATGGACAATATACTGGTGACAGTTTGACGTTACTTGATGAACCCATTCGTGACACAATTTTTAGATCAGCCCGCGCCGTTGGTCAAAAGTTTGCTTACGTTCTAGTCCCACGCCAAGGACAGGGGTTGTTGAAAGAATGGGATTTGTGGGGTCCGTTAGTGTTGTGTCTTATCATGTCAGCGCTCTTACATAG]

[-] EMBL CD123523             [CTTCAAGGTCGAGTCGATTTGAAGGTCAAGTGAGCGTAGTACTGGGATTTTTGGCCCTATGCTAGAGTTTCAGTCTTCCAGCCACCATATGGGTTCTGTCCTCTTAGAAGGTCATATCTCTGACAATGGACAATATACTGGTGACAGTTTGACGTTACTTGATGAACCCATTCGTGACACAATTTTTAGATCAGCCCGCGCCGTTGGTCAAAAGTTTGCTTACGTTCTAGTCCCACGCCAAGGACAGGGGTTGTTGAAAGAATGGGATTTGTGGGGTCCGTTAGTGTTGTGTCTTATCATGTCAGCGCTCTTACATAG]




>consensus_10845#2
CTTCAAGGTCGAGTCGATTTGAAGGTCAAGTGAGCGTAGTACTGGGATTTTTGGCCCTAT
GCTAGAGTTTCAGTCTTCCAGCCACCATATGGGTTCTGTCCTCTTAGAAGGTCATATCTC
TGACAATGGACAATATACTGGTGACAGTTTGACGTTACTTGATGAACCCATTCGTGACAC
AATTTTTAGATCAGCCCGCGCCGTTGGTCAAAAGTTTGCTTACGTTCTAGTCCCACGCCA
AGGACAGGGGTTGTTGAAAGAATGGGATTTGTGGGGTCCGTTAGTGTTGTGTCTTATCAT
GTCAGCGCTCTTACATAG

consensusID : consensus_10845#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 284
fasta sequence

                              [TTGAAGGTCAAGTGAACGTAGTACTGGGATTTTTGGCCCTATGCTAGAGTTTCAGTCTTCCAGCCACGTAGGTCCTATTAGAGGTGCTTTAATGTTTAGCATATGGGTTCTGTCCTCTTAGAAGGTCATATCTCTGACAATGGACAATATACTGGTGACAGTTTGACGTTACTTGATGAACCCATTCGTGATACGATTTTTAGATCAGCCCGCGCCGTTGGTCAAAAGTTTGCTTACGTTCTAGTCCCACGCCAAGGACAGGGGTTGTTGAAAGAATGGGATTT]

[+] EMBL CD185985             [TTGAAGGTCAAGTGAACGTAGTACTGGGATTTTTGGCCCTATGCTAGAGTTTCAGTCTTCCAGCCACGTAGGTCCTATTAGAGGTGCTTTAATGTTTAGCATATGGGTTCTGTCCTCTTAGAAGGTCATATCTCTGACAATGGACAATATACTGGTGACAGTTTGACGTTACTTGATGAACCCATTCGTGATACGATTTTTAGATCAGCCCGCGCCGTTGGTCAAAAGTTTGCTTACGTTCTAGTCCCACGCCAAGGACAGGGGTTGTTGAAAGAATGGGATTT]




>consensus_10845#3
TTGAAGGTCAAGTGAACGTAGTACTGGGATTTTTGGCCCTATGCTAGAGTTTCAGTCTTC
CAGCCACGTAGGTCCTATTAGAGGTGCTTTAATGTTTAGCATATGGGTTCTGTCCTCTTA
GAAGGTCATATCTCTGACAATGGACAATATACTGGTGACAGTTTGACGTTACTTGATGAA
CCCATTCGTGATACGATTTTTAGATCAGCCCGCGCCGTTGGTCAAAAGTTTGCTTACGTT
CTAGTCCCACGCCAAGGACAGGGGTTGTTGAAAGAATGGGATTT

consensusID : consensus_10845#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 239
fasta sequence

                              [TCTAGTCCCACGCCAAGGACAGGGGTTGTTGAAAGAATGTAGGTGATCCTCTGATATTAATTCTTTATTTCAGGGGATTTGTGGGGTCCGTTAGTGTTGTGTCTTATCATGTCAGCGTAAGTTTACATATAGACTCCACTACAATTTATTGCTAACCTTTGAAGCAATGCGACTTGAATATCCCAGCGAACGTAGTTTATTCTGTTTCAACTCAATGTATGCGAACCGAACCAAAGATC]

[+] EMBL CD185881             [TCTAGTCCCACGCCAAGGACAGGGGTTGTTGAAAGAATGTAGGTGATCCTCTGATATTAATTCTTTATTTCAGGGGATTTGTGGGGTCCGTTAGTGTTGTGTCTTATCATGTCAGCGTAAGTTTACATATAGACTCCACTACAATTTATTGCTAACCTTTGAAGCAATGCGACTTGAATATCCCAGCGAACGTAGTTTATTCTGTTTCAACTCAATGTATGCGAACCGAACCAAAGATC]




>consensus_10845#4
TCTAGTCCCACGCCAAGGACAGGGGTTGTTGAAAGAATGTAGGTGATCCTCTGATATTAA
TTCTTTATTTCAGGGGATTTGTGGGGTCCGTTAGTGTTGTGTCTTATCATGTCAGCGTAA
GTTTACATATAGACTCCACTACAATTTATTGCTAACCTTTGAAGCAATGCGACTTGAATA
TCCCAGCGAACGTAGTTTATTCTGTTTCAACTCAATGTATGCGAACCGAACCAAAGATC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10845#1      GGACAGGGGTTGTTGAAAGAATGGGATTTGAAGGTCAAGTGAGCGTAGTACTGGGATTTT 60
consensus_10845#3      ---------------------------TTGAAGGTCAAGTGAACGTAGTACTGGGATTTT 33
consensus_10845#2      ---------CTTCAAGGTCGAGTCGATTTGAAGGTCAAGTGAGCGTAGTACTGGGATTTT 51
consensus_10845#0      ----------------------TCGATTTGAAGGTCAAGTGAACGTAGTACTGGGATTTT 38
consensus_10845#4      ----------------TCTAGTCCCACGCCAAGGACAGG-GGTTGTTGAAAGAATGTAGG 43
                                                     **** ** * *   ** * *      *   

consensus_10845#1      TGGCCCTATGCTAGAGTTTCAGTCTTCCAGCCAC-------------------------- 94
consensus_10845#3      TGGCCCTATGCTAGAGTTTCAGTCTTCCAGCCACGTAGGTCCTATTAGAGGTGCTTTAAT 93
consensus_10845#2      TGGCCCTATGCTAGAGTTTCAGTCTTCCAGCCAC-------------------------- 85
consensus_10845#0      TGGCCCTATGCTAGAGTTTCAGTCTTCCAGCCAC-------------------------- 72
consensus_10845#4      TGATCCTCTGATATTAATTCTTTATTTCAGGGGA-------------------------- 77
                       **  *** ** **    ***  * ** ***                              

consensus_10845#1      ------CATATGGGTTCTGTCCTCTTAGAAGGTCATATCTCTGACAATGGACAATATACT 148
consensus_10845#3      GTTTAGCATATGGGTTCTGTCCTCTTAGAAGGTCATATCTCTGACAATGGACAATATACT 153
consensus_10845#2      ------CATATGGGTTCTGTCCTCTTAGAAGGTCATATCTCTGACAATGGACAATATACT 139
consensus_10845#0      ------CATATGGGTTCTGTCCTCTTAGAAGGTCATATCTCTGACAATGGACAATATACT 126
consensus_10845#4      ------TTTGTGGGGTCCGTTAGTGTTGTGTCTTATCATGTCAGCGTAAGTTTACATATA 131
                               * **** ** **     * *    * **        *    *   * ***  

consensus_10845#1      GGTGACAGTTTGACGTTACTTGATGAACCCATTCGTGATACAATTTTTAGATC--AGCCC 206
consensus_10845#3      GGTGACAGTTTGACGTTACTTGATGAACCCATTCGTGATACGATTTTTAGATC--AGCCC 211
consensus_10845#2      GGTGACAGTTTGACGTTACTTGATGAACCCATTCGTGACACAATTTTTAGATC--AGCCC 197
consensus_10845#0      GGTGACAGTTTGACGTTACTTGATGAACCCATTCGTGATACAATTTTTAGATC--AGCCC 184
consensus_10845#4      GACTCCACTACAA--TTTATTGCTAACCTTTGAAGCAATGCGACTTGAATATCCCAGCGA 189
                       *    ** *   *  **  *** * * *      *  *  * * **  * ***  ***  

consensus_10845#1      GCGCCGTTGGTCAAAAGTTTGCTTA-CGTTCTAGTCCCACGCCAAGGACAGGGGTTGTTG 265
consensus_10845#3      GCGCCGTTGGTCAAAAGTTTGCTTA-CGTTCTAGTCCCACGCCAAGGACAGGGGTTGTTG 270
consensus_10845#2      GCGCCGTTGGTCAAAAGTTTGCTTA-CGTTCTAGTCCCACGCCAAGGACAGGGGTTGTTG 256
consensus_10845#0      GCGCCGTTGGTCAAAAGTTTGCTTA-CGTTCTAGTCCCACGCCAAGGACAGGGGTTGTTG 243
consensus_10845#4      ACGTAGTTTATTCTGTTTCAACTCAATGTATGCGAACCGAACCAAAGATC---------- 239
                        **  ***  *      *   ** *  **    *  **   **** **            

consensus_10845#1      AAAGAATG-----------------------------------GGATTTGTGGGGTCCGT 290
consensus_10845#3      AAAGAATG-----------------------------------GGATTT----------- 284
consensus_10845#2      AAAGAATG-----------------------------------GGATTTGTGGGGTCCGT 281
consensus_10845#0      AAAGAATGTAGGTGATCCTCTGATATTAATTCTTTATTTCAGGGGATTTGTGGGGTCCGT 303
consensus_10845#4      ------------------------------------------------------------
                                                                                   

consensus_10845#1      TAGTGTTGTGTCTTATCATGTCAGCGCTCTTACATAGCAGCTCAAACTCAGAAAGTTTTG 350
consensus_10845#3      ------------------------------------------------------------
consensus_10845#2      TAGTGTTGTGTCTTATCATGTCAGCGCTCTTACATAG----------------------- 318
consensus_10845#0      TAGTGTTGTGTCTTATCATGTCAGCGCTCTTACATAGCAGCTCAAACTCAGAAAGTTTTG 363
consensus_10845#4      ------------------------------------------------------------
                                                                                   

consensus_10845#1      GACATGGCGGACCAGAGTTTGCCCAGGTCTTCGTTATTTTCTGGTTGGGTTCGGCAGTTG 410
consensus_10845#3      ------------------------------------------------------------
consensus_10845#2      ------------------------------------------------------------
consensus_10845#0      GACATGGCGGACCAGAGTTTGCCCAGGTCTTCGTTATTTTCTGGTTGGGTTCGGCAGTTG 423
consensus_10845#4      ------------------------------------------------------------
                                                                                   

consensus_10845#1      TGACTTTGAATTCTAAATTACTCGGTGGCGCAGTGTCATTCCTACAAACCGTATGCGTCT 470
consensus_10845#3      ------------------------------------------------------------
consensus_10845#2      ------------------------------------------------------------
consensus_10845#0      TGACTTTGAATTCTAAATTACTCGGTGGCGCAGTGTCATTCCTACAAACCGTATGCGTCT 483
consensus_10845#4      ------------------------------------------------------------
                                                                                   

consensus_10845#1      TGGGGTATTGTATTTTGCCTCTTGTTATTGGCTTGGTTATATGTCGATTACTGTTGCTTG 530
consensus_10845#3      ------------------------------------------------------------
consensus_10845#2      ------------------------------------------------------------
consensus_10845#0      TGGGGTATTGTATTTTGCCTCTTGNTATTGGCTTGGTTATATGTCGATTACTGGTGCTTG 543
consensus_10845#4      ------------------------------------------------------------
                                                                                   

consensus_10845#1      CAAGTTCTAATTCTGTGTTTGTTTTCATCATACGACTATTCATTGGTAT 579
consensus_10845#3      -------------------------------------------------
consensus_10845#2      -------------------------------------------------
consensus_10845#0      CAAGTTCTAATTCTGTGTTTGNTTTCATCATACGACTATTCAT------ 586
consensus_10845#4      -------------------------------------------------