cluster # 10855

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Schistosoma mansoni
cluster # 10855 cluster # 10855 Sequences # 23 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10855#0 length = 1108 sequences # 8
consensus_10855#1 length = 890 sequences # 11

consensus_10855#2 length = 425 sequences # 1
consensus_10855#3 length = 321 sequences # 2
consensus_10855#4 length = 301 sequences # 1

consensusID : consensus_10855#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1108
fasta sequence

                              [GAGCCATTAATTCGGCACGACGGGCTTCCCGACACCTATTACTTCAAATTCTGTCTCAAACTATGCCAATGCTTCTAACTATGTAGGCGTGATTGGAGGAGGGCGACCGAATACTGACCATTCAAATGCTACAGTTCGACAAAGAGGTTTACAGCATCACAATTTATTCCCCCATCCAAAC-CTCCCACAGTCACCCTCAGCGCAAGGACAACAGTCTTTTCAGTTGCCATCCAGTTTTTATCCGTCGATTTCACCATCGCATCAACGCGTATCACTTCAGCAGTTTGGAGGTACATCTCGTGCAGCAATCACTGGACCAATTAATCCGCAAAATGGACTTTATGGTCCAGCATTTGGTGGGGCTTCTCATCCACCAAATCAAGCCACTCCACCTCCTATCGGACATCAGTTGAATCCTATAGGTTTTTATAGTAATCAGTTCCAATATCCATCTCGTCCGGACGGAC-TTCACTGACAAATCACCCGTACAATGTGTTTCTTGACTTTTATTGTGGAGAATTATTTTCCGAGTTCTGTGCTTCCATCCTAACTATATATCTTACGATCATACTGTAATCTATTCGTATTAGTCAAAGAATGGTCACTACTTGTCTTTAAATGCACATCATTTTTTTTGTAGATCACTTGTAGTCTTGGCCAGTTTTTCTATAAACAGAACAATTTCTTTTAATCTTTTTTCTTGTTTGTGTCAATTCTCTGTATCTTTGAGTTTTTTTTATCAAATTAAATGTGTTTGATGACTGTAAATTCTGTTTCTTGTGAATCTTTGTCATGTATGTTATACATTGTCTACTAAATGGTCAACATGATGATTGCTTGTGTTTCCGACTAGATTGTCTTTGATCCAATGATGATTTTATTGCTCGGTTTTCTCTATCTTTCAATTAGAGAATCCTATATAATTCTTCTTGTCTGTCTATGATTTGACACTTGATCTGAAATTTTACTTATTATCACTATCACCACTTAATAATAATTGTTGTACACGTTCTCCCTTCTGCTCATTGGCTAACTTGATTGGTTATTCTTGTAAACAGGATATATACATATATATTTATATATATAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CD081724             [GAGCCATTAATTCGGCACGACGGGCTTCCCGACACCTATTACTTCAAATTCTGTCTCAAACTATGCCAATGCTTCTAACTATGTAGGCGTGATTGGAGGAGGGCGACCGAATACTGACCATTCAAATGCTACAGTTCGACAAAGAGGTTTACAGCATCACAATTTATTCCCCCATCCAAAC CTCCCACAGTCACCCTCAGCGCAAGGACAACAGTCTTTTCAGTTGCCATCCAGTTTTTATCCGTCGATTTCACCATCGCATCAACGCGTATCACTTCAGCAGTTTGGAGGTACATCTCGTGCAGCAATCACTGGACCAATTAATCCGCAAAATGGACTTTATGGTCCAGCATTTGGTGGGGCTTCTCATCCACCAAATCAAGCCACTCCACCTCCTATCGGACATCAGTTGAATCCTATAGGTTTTTATAGTAATCAGTTCCAATATCCATCTCGTCCGGACGGAC TTCACTGACAAATCACCCGTACAATGTGTTTCTTGACTTTTATTGTGGAGAATTATTTTCCGAGTTCTGTGCTTCCATCCTAACTATATATCTTACGATCATACTGTAATCTATTCGTATTAGTCAAAGAATGGTCACTACTTGTCTTTAAATGCACATCATTTTTTTTGTAGATCACTTGTAGTCTTGGCCAGTTTTTCTATAAACAGAACAATTTCTTTTAATCTTTTTTCTTGTTTGTGTCAATTCTCTGTATCTTTGAGTTTTTTTTATCAAATTAAAT                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AI559071             [                                                                                                                                                                        CCCCCATCCAAACGATCCCACAGTCACCCTCAGCGCAAGGACAACAGTCTTTTCAGTTGCCATCCAGTTTTTATCCGTCGATTTCACCATCGCATCAACGCGTATCACTTCAGCAGTTTGGAGGTACATCTCGTGCAGCAATCACTGGACCAATTAATCCGCAAAATGGACTTTATGGTCCAGCATTTGGTGGGGCTTCTCATCCACCAAATCAAGCCACTCCACCTCCTATCGGACATCAGTTGAATCCTATAGGTTTTTATAGTAATCAGTTCCAATATCCATCTCGTCGGGACGGACTTTCACTGACAAATCA CCGTA AATGTGTTTCTTGACTTTTATTGTGGAGAATTA TTTCCGAGTTCTGTGCTTCCATCCTAACTATATATCTTACGATCATACTGTAATCTATTCGTATTAGTCAAAGAATGGTCCATACTTGTCTTAAAATGCACATCATTTTTTTTGTAGATCACTTGTAGTCCTGGCCAGTTTTTCTATAAAAAGAACAATTTC TTTAAACCTTTTTCTCGTTg                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD087997             [                                                                                                                                                                                                CACCCTCAGCGCAAGGACAACAGTCTTTTCAGTTGCCATCCAGTTTTTATCCGTCGATTTCACCATCGCATCAACGCGTATCACTTCAGCAGTTTGGAGGTACATCTCGTGCAGCAATCACTGGACCAATTAATCCGCAAAATGGACTTTATGGTCCAGCATTTGGTGGGGCTTCTCATCCACCAAATCAAGCCACTCCACCTCCTATCGGACATCAGTTGAATCCTATAGGTTTTTATAGTAATCAGTTCCAATATCCATCTCGTCCGGACGGAC TTCACTGACAAATCACCCGTACAATGTGTTTCTTGACTTTTATTGTGGAGAATTATTTTCCGAGTTCTGTGCTTCCATCCTAACCATATATCTTACGATCATACTGTAATCTATTCGTATTAGTCAAAGAATGGTCACTACTTGTCTTTAAATGCACATCATTTTTTTTGTAGATCACTTGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD088418             [                                                                                                                                                                                                                         TTTTCAGTTGCCATCCAGTTTTTATCCGTCGATTTCACCATCGCATCAACGCGTATCACTTCAGCAGTTTGGAGGTACATCTCGTGCAGCAATCACTGGACCAATTAATCCGCAAAATGGACTTTATGGTCCAGCATTTGGTGGGGCTTCTCATCCACCAAATCAAGCCACTCCACCTCCTATCGGACATCAGTTGAGTCCTATAGGTTTTTATAGTAATCAGTTCCAATATCCATCTCGTCCGGACGGAC TTCACTGACAAATCACCCGTACAATGTGTTTCTTGACTTTTATTGTGGAGAATTATTTTCCGAGTTCTGTGCTTCCATCCTAACTATATATCTTACGATCATACTGTAATCTATTCGTATTAGTCAAAGAATGGTCACTACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD197019             [                                                                                                                                                                                                                                                               CATCGCATCAACGCGTATCACTTCAGCAGTTTGGAGGTACATCTCGTGCAGCAATCACTGGACCAATTAATCCGCAAAATGGACTTTATGGTCCAGCATTTGGTGGGGCTTCTCATCCACCAAATCAAGCCACTCCACCTCCTATCGGACATCAGTTGAATCCTATAGGTTTTTATAGTAATCAGTTCCAATATCCATCTCGTCCGGACGGAC TTCACTGACAAATCACCCGTACAATGTGTTTCTTGACTTTTATTGTGGAGAATTATTTTCCGAGTTCTGTGCTTCCATCCTAACTATATATCTTACGATCATACTGTAATCTATTCGTATTAGTCAAAGAATGGTCACTACTTGTCTTTTAATGCACATCATTTTTTTTGTAGATCACTTGTAGTCTTGGCCAGTTTTTCTATTAACAGAACAATTTCT                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD088467             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   C TTCACTGACAAATCACCCGTACAATGTGTTTCTTGACTTTTATTGTGGAGAATTATTTTCCGAGTTCTGTGCTTCCATCCTAACTATATATCTTACGATCATACTGTAATCTATTCGTATTAGTCAAAGAATGGTCACTACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AI618806             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AGAACAATTTCTTTTAATCTTTTTTCTTGTTTGTGTCAATTCTCTGTATCTTTGAGTTTTTTTTATCAAATTAAATGTGTTTGATGACTGTAAATTCTGTTTCTTGTGAATCTTTGTCATGTATGTTATACATTGTCTACTAAATGGTCAACATGATGATTGCTTGTGTTTCCGACTAGATTGTCTTTGATCCAATGATGATTTTATTGCTCGGTTTTCTCTATCTTTCAATTAGAGAATCCTATATAATTCTTCTTGTCTGTCTATGATTTGACACTTGATCTGAAATTTTACTTATTATCACTATCACCACTTAATAA                                                                                                                  ]
[-] EMBL AI395258             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TCTGTATCTTTGAG TTTTTTTATCAAATTAAATGTGTTTGATGACTGTAAATTCTGTTTCTTGTGAATCTTTGTCATGTATGTTATACATTGTCTACTAAATGGTCAACATGATGATTGCTTGTGTTTCCGACTAGATTGTCTTTGATCCAATGATGATTTTATTGCTC GTTTTCTCTATCTTTCAATTAGAGAATCCTATATAATTCTTCTTGTCTGTCTATGATTTGACACTTGATCTGAAATTTTACTTATTATCATTATCATCA TTAATAATAATTGTTGTACACGTTCTCCCTTCTGCTCATTGGCTAACTTGATTGGTTATTCTTGTAAACAGGATATATACATATATATTTATATATATAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_10855#0
GAGCCATTAATTCGGCACGACGGGCTTCCCGACACCTATTACTTCAAATTCTGTCTCAAA
CTATGCCAATGCTTCTAACTATGTAGGCGTGATTGGAGGAGGGCGACCGAATACTGACCA
TTCAAATGCTACAGTTCGACAAAGAGGTTTACAGCATCACAATTTATTCCCCCATCCAAA
CCTCCCACAGTCACCCTCAGCGCAAGGACAACAGTCTTTTCAGTTGCCATCCAGTTTTTA
TCCGTCGATTTCACCATCGCATCAACGCGTATCACTTCAGCAGTTTGGAGGTACATCTCG
TGCAGCAATCACTGGACCAATTAATCCGCAAAATGGACTTTATGGTCCAGCATTTGGTGG
GGCTTCTCATCCACCAAATCAAGCCACTCCACCTCCTATCGGACATCAGTTGAATCCTAT
AGGTTTTTATAGTAATCAGTTCCAATATCCATCTCGTCCGGACGGACTTCACTGACAAAT
CACCCGTACAATGTGTTTCTTGACTTTTATTGTGGAGAATTATTTTCCGAGTTCTGTGCT
TCCATCCTAACTATATATCTTACGATCATACTGTAATCTATTCGTATTAGTCAAAGAATG
GTCACTACTTGTCTTTAAATGCACATCATTTTTTTTGTAGATCACTTGTAGTCTTGGCCA
GTTTTTCTATAAACAGAACAATTTCTTTTAATCTTTTTTCTTGTTTGTGTCAATTCTCTG
TATCTTTGAGTTTTTTTTATCAAATTAAATGTGTTTGATGACTGTAAATTCTGTTTCTTG
TGAATCTTTGTCATGTATGTTATACATTGTCTACTAAATGGTCAACATGATGATTGCTTG
TGTTTCCGACTAGATTGTCTTTGATCCAATGATGATTTTATTGCTCGGTTTTCTCTATCT
TTCAATTAGAGAATCCTATATAATTCTTCTTGTCTGTCTATGATTTGACACTTGATCTGA
AATTTTACTTATTATCACTATCACCACTTAATAATAATTGTTGTACACGTTCTCCCTTCT
GCTCATTGGCTAACTTGATTGGTTATTCTTGTAAACAGGATATATACATATATATTTATA
TATATAAAAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_10855#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 890
fasta sequence

                              [ATTTCCATCATACCCAGGCAACAGCACAT-CAGTC-TATCAAAACTCTATA-TAACACCCGCAGATAGAGTAAACATATATTCCAGTGGT-CATAT-GGAAATAACTCTACAGAACTAGGAAAACTATCAAAC-AACCTATGTGTTCCGTCTCAACAAATGACTTATGTATCTGCAGCGCCTTCATTATATGTCCATCCACAGTCAACTGCAATTCAGCCGGCACCTTCTCGATCATTTCACCATTCCTTATCAATTCCGATTCAGTCACAAATGAGTCAAGCTCGGAAGTGCAGACAACAGGTACCACATCAAATGGATCCATCCACATTTACTGCTGGGTATACGAGTTTTCCCACGGACATAAAAAATGAATACAATTTCCCTCCGTCTATTGCTGGTTGTATTCCACCTCCTCCTTCTGTTGGCTTGTATTCAGCCATTCATCAGTCTAATTACCCACAGAATTCAGGAAGACATGCAATCGGATTTCCGACGACTGTAAATTCGTATTCTCTTCTTGGAAACCCTTCTGCTACTTCTAATCTTCAAGCTGCTGGACAACCATATGCCCCAGCGATCGGACCAGCTGCTGGAAACGGTGGAGGTTTATTACCTCATCCTGTTCCTCAGGGTGGTTATAACAATACACCTTGTCACTTCCCGACACCTATTACTTCAAATTCTGTCTCAAACTATGCCAATGCTTCTAACTATGTAGGCGTGATTGGAGGAGGGCGACCGAATACTGACCATTCAAATGCTACAGTTCGACAAAGAGGTTTACAGCATCACAATTTATTCCCCCATCC--ACCTCCCACAGTCACCCTCAGCGCAAGGACAACAGTCTTTTCAGTTGCCATCCAGTTTTTATCCGTCGATTTCACCATCGCATCA]

[-] EMBL CD165195             [ATTTCCATCATACCCAGGCAACAGCACATACAGTCTTATCAAAACTCTATATTAACACCCGCAGATAGAGTAAACATATATTCCAGTGGTCCATAT GGAAATAACTCTACAGAACTAGGAAAACTATCAAAC AACCTATGTGTTCCGTCTCAACAAATGACTTATGTATCTGCAGCGCCTTCATTATATGTCCATCCACAGTCAACTGCAATTCAGCCGGCACCTTCTCGATCATTTCACCATTCCTTATCAATTCCGATTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD181252             [                         ACAT CAGTC TATCAAAACTCTATA TAACACCNGCAGATAGAGTAACCATATATTCCAGTGGT CATATGGGAAATAACTCTACAGAACTAGGAAAACTATCAAACNACCCTATGTGTTCCGTCTCAACAAATGACTTATGTATCTGCAGCGCCTTCATTATATGTCCATCCACAGTCAACTGCAATTCAGCCGGCACCTTCTCGATCATTTCACCATTCCTTATCAATTCCGATTCAGTCACAAATGAGTCAAGCTCGGAAGTGCAGACAACAGGTACCACATCAAATGGATCCATCCACATTTACTGCTGGGTATACGAGTTTTCCCACGGACATAAAAAATGAATACAATTTCCCTCCGTCTATTGCTGGTTGTATTCCACCTCCTCCTTCTGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD095423             [                                                                                                                                                                                                                                                                                                                ACCACATCAAATGGATCCATCCACATTTACTGCTGGGTATACCAGTTTTCCCACGGACATAAAAAATGAATACAATTTCCCTCCGTCTATTGCTGGTTGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD200657             [                                                                                                                                                                                                                                                                                                                                           cgggnCTGGGTATGCAAGTTTTCCCACGGACATAAAAAATGAATACAGTTTCCCTCCGTCTATTGCTGGTTGTATTCCACCTCCTCCTTCTGTTGGCTTGTATTCAGCCATTCATCAGTCTAATTACCCACAGAATTCAGGAAGACATGCAATCGGATTTCCGACGACTGTAAATTCGTATTCTCTTCTTGGAAACCCTTCTGCTACTTCTAATCTTCAAGCTGCTGGACAACCATATGCCCCAGCGATCGGACCAGCTGCTGGAAACGGTGGAGGTTTATTACCTCATCCTGTTCCTCAGGGTGGTTATAACAATACACCTTGTCACTTCCCGACACCTATTACTTCAAATTCTGTCTCAAACTATGCCAATGCTTCTAACTATGTAGGCGTGATTGGAGGAGGGCGACCGAATACTGACCATTCAAATGCTACAGTTCGACAAAGAGGTTTACAGCATCACA                                                                                                       ]
[+] EMBL CD200716             [                                                                                                                                                                                                                                                                                                                                                              TTTCCCACGGACATAAAAAATGAATACAATTTCCCTCCGTCTATTGCTGGTTGTATTCCACCTCCTCCTTCTGTTGGCTTGTATTCAGCCATTCATCAGTCTAATTACCCACAGAATTCAGGAAGACATGCAATCGGATTTCCGACGACTGTAAATTCGTATTCTCTTCTTGGAAACCCTTCTGCTACTTCTAATCTTCAAGCTGCTGGACAACCATATGCCCCAGCGATCGGACCAGCTGCTGGAAACGGTGGAGGTTTATTACCTCATCCTGTTCCTCAGGGTGGTTATAACAATACACCTTGTCACTTCCCGACACCTATTACTTCAAATTCTGTCTCAAACTATGCCAATGCTTCTAACTATGTAGGCGTGATTGGAGGAGGGCGACCGAATACTGACCATTCAAATGCTACAGTTCGACAAAGAGGTTTACAGCATCACAATTTATTCCCCCAGCC  cc                                                                                   ]
[+] EMBL CD201034             [                                                                                                                                                                                                                                                                                                                                                              TTTCCCACGGACATAAAAAATGAATACAATTTCCCTCCGTCTATTGCTGGTTGTATTCCACCTCCTCCTTCTGTTGGCTTGTATTCAGCCATTCATCAGTCTAATTACCCACAGAATTCAGGAAGACATGCAATCGGATTTCCGACGACTGTAAATTCGTATTCTCTTCTTGGAAACCCTTCTGCTACTTCTAATCTTCAAGCTGCTGGACAACCATATGCCCCAGCGATCGGACCAGCTGCTGGAAACGGTGGAGGTTTATTACCTCATCCTGTTCCTCAGGGTGGTTATAACAATACACCTTGTCACTTCCCGACACCTATTACTTCAAATTCTGTCTCAAACTATGCCAATGCTTCTAACTATGTAGGCGTGATTGGAGGAGGGCGACCGAATACTGACCATTCAAATGCTACAGTTCGACAAAGAGGTTTACAGCATCAC                                                                                                        ]
[+] EMBL CD169140             [                                                                                                                                                                                                                                                                                                                                                               TTCCCACGGACATAAAAAATGAATACAATTTCCCTCCGTCTATTGCTGGTTGTATTCCACCTCCTCCTTCTGTTGGCTTGTATTCAGCCATTCATCAGTCTAATTACCCACAGAATTCAGGAAGACATGCAATCGGATTTCCGACGACTGTAAATTCGTATTCTCTTCTTGGAAACCCTTCTGCTACTTCTAATCTTCAAGCTGCTGGACAACCATATGCCCCAGCGATCGGACCAGCTGCTGGAAACGGTGGAGGTTTATTACCTCATCCTGTTCCTCAGGGTGGTTATAACAATACACCTTGTCACTTCCCGACACCTATTA                                                                                                                                                                                                                               ]
[+] EMBL CD094410             [                                                                                                                                                                                                                                                                                                                                                                      GGACATAAAAAATGAATACAATTTCCCTCCGTCTATTGCTGGTTGTATTCCACCTCCTCCTTCCGTTGGCTTGTATTCAGCCATTCATCAGTCTAATTACCCACAGAATTCAGGAAGACATGCAATCGGATTTCCGACGACTGTAAATTCGTATTCTCTTCTTGGAAACCCTTCTGCTACTTCTAATCTTCAAGCTGCTGGACAACCATATGCCCCAGCGATCGGACCAGCTGCTGGAAACGGTGGAGGTTTATTACCTCATCCTGTTCCTCAGGGTGGTTAAAACAATACACCTTGTCACTTCCCGACACCTATCACTTCAAATTCTGTCTCAAACTATGCCAATGCTTCTAACTATGTAGGCGTGATTGGAGGAGGGCGACCGAATACTGACCATTCAAATGCTACAGTTCGACAAAGAGATTTACAGCATCACAATTTATTCCCCCAT                                                                                         ]
[-] EMBL CD068343             [                                                                                                                                                                                                                                                                                                                                                                                                                                                              CAGTCTAATTACCCACAGAATTCAGGAAGACATGCAATCGGATTTCCGACGACTGTAAATTCGTATTCTCTTCTTGGAAACCCTTCTGCTACTTCTAATCTTCAAGCTGCTGGACAACCATATGCCCCAGCGATCGGACCAGCTGCTGGAAACGGTGGAGGTTTATTACCTCATCCTGTTCCTCAGGGTGGTTATAACAATACACCTTGTCACTTCCCGACACCTATTACTTCAAATTCTGTCTCAAACTATGCCAATGCTTCTAACTATGTAGGCGTGATTGGAGGAGGGCGACCGAATACTGACCATTCAAATGCTACAGTTCGACAAAGAGGTTTACAGCATCACAATCT TTCCCCCATCA  ACCTCCCACAGT                                                                         ]
[-] EMBL CD150610             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 aTCTGCTAC TCTAACCTTCAAGCTGCTGGACAACCATATGCCCCAGCGATCGGACCAGCTGCTGGAAACGGTGGAGGTTTATTACCTCATCCTGTTCCTCAGGGTGGTTATAACAATACACCTTGTCACTTCCCGACACCTATTACTCCAAATTCTGTCTCAGACTATGCCAATGCTTCTAACTATGTAGGCGTGATTGGAGGAGGGCGACCGAATACTGACCATTCAAATGCTACAGTTCGACAAAGAGATTTACAGCATCACAATTTATTCCCCCATCCAAACCTCCCACAGTCACCCTCAGCGCAAGGACAACAGT                                                 ]
[+] EMBL CD185616             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CTGGAAACGGTGGAGGTTTATTACCTCATCCTGTTCCTCAGGGTGGTTATAACAATGCACCTTGTCACTTCCCGACACCTATTACTTCAAATTCTGTCTCAAACTATGCCAATGCTTCTAACTATGTAGGCGTGATTGGAGGAGGGCGACCGAATACTGACCATTCAAATGCTACAGTTCGACAAAGAGGTTTACAGCATCACAATTTATTCCCCCATCCAAACCTCCCACAGTCACCCTCAGCGCAAGGACAACAGTCTTTTCAGTTGCCATCCAGTTTTTATCCGTCGATTTCACCATCGCATCA]




>consensus_10855#1
ATTTCCATCATACCCAGGCAACAGCACATCAGTCTATCAAAACTCTATATAACACCCGCA
GATAGAGTAAACATATATTCCAGTGGTCATATGGAAATAACTCTACAGAACTAGGAAAAC
TATCAAACAACCTATGTGTTCCGTCTCAACAAATGACTTATGTATCTGCAGCGCCTTCAT
TATATGTCCATCCACAGTCAACTGCAATTCAGCCGGCACCTTCTCGATCATTTCACCATT
CCTTATCAATTCCGATTCAGTCACAAATGAGTCAAGCTCGGAAGTGCAGACAACAGGTAC
CACATCAAATGGATCCATCCACATTTACTGCTGGGTATACGAGTTTTCCCACGGACATAA
AAAATGAATACAATTTCCCTCCGTCTATTGCTGGTTGTATTCCACCTCCTCCTTCTGTTG
GCTTGTATTCAGCCATTCATCAGTCTAATTACCCACAGAATTCAGGAAGACATGCAATCG
GATTTCCGACGACTGTAAATTCGTATTCTCTTCTTGGAAACCCTTCTGCTACTTCTAATC
TTCAAGCTGCTGGACAACCATATGCCCCAGCGATCGGACCAGCTGCTGGAAACGGTGGAG
GTTTATTACCTCATCCTGTTCCTCAGGGTGGTTATAACAATACACCTTGTCACTTCCCGA
CACCTATTACTTCAAATTCTGTCTCAAACTATGCCAATGCTTCTAACTATGTAGGCGTGA
TTGGAGGAGGGCGACCGAATACTGACCATTCAAATGCTACAGTTCGACAAAGAGGTTTAC
AGCATCACAATTTATTCCCCCATCCACCTCCCACAGTCACCCTCAGCGCAAGGACAACAG
TCTTTTCAGTTGCCATCCAGTTTTTATCCGTCGATTTCACCATCGCATCA

consensusID : consensus_10855#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 425
fasta sequence

                              [AAGAATGGTCACTACTTGTCTTTAAATGCACATCATCTTTCTTGTAGATCCCCTTAGTCTTGACCAGTTTTTCTGTAAACAGGACAATTTCTCATTATCTTTTTTCTTGTTTGTGTCAATTCTCTGTATCTTTGAGTTTTTTTTATCAAATTAAATGTGTTTGATGACTGTAAATTCTGTTTCTTGTGAATCTTTGTCATGTATGTTATACATTGTCTACTAAATGGTCAACATGATGATTGCTTGTGTTTCCGACTAGATTGTCTTTGATCCAATGATGATTTTATTGCTCGTTTTCTCTATCTTTCAATTAGAGAATCCTATATAATTCTTCTTGTCTGTCTATGATTTGACACTTGATCTGAAATTTTACTTATTATCATTATCATCATTAATAATAATTGTTGTACAAAAAAAAAAAAAAA]

[-] EMBL AI395398             [AAGAATGGTCACTACTTGTCTTTAAATGCACATCATCTTTCTTGTAGATCCCCTTAGTCTTGACCAGTTTTTCTGTAAACAGGACAATTTCTCATTATCTTTTTTCTTGTTTGTGTCAATTCTCTGTATCTTTGAGTTTTTTTTATCAAATTAAATGTGTTTGATGACTGTAAATTCTGTTTCTTGTGAATCTTTGTCATGTATGTTATACATTGTCTACTAAATGGTCAACATGATGATTGCTTGTGTTTCCGACTAGATTGTCTTTGATCCAATGATGATTTTATTGCTCGTTTTCTCTATCTTTCAATTAGAGAATCCTATATAATTCTTCTTGTCTGTCTATGATTTGACACTTGATCTGAAATTTTACTTATTATCATTATCATCATTAATAATAATTGTTGTACAAAAAAAAAAAAAAA]




>consensus_10855#2
AAGAATGGTCACTACTTGTCTTTAAATGCACATCATCTTTCTTGTAGATCCCCTTAGTCT
TGACCAGTTTTTCTGTAAACAGGACAATTTCTCATTATCTTTTTTCTTGTTTGTGTCAAT
TCTCTGTATCTTTGAGTTTTTTTTATCAAATTAAATGTGTTTGATGACTGTAAATTCTGT
TTCTTGTGAATCTTTGTCATGTATGTTATACATTGTCTACTAAATGGTCAACATGATGAT
TGCTTGTGTTTCCGACTAGATTGTCTTTGATCCAATGATGATTTTATTGCTCGTTTTCTC
TATCTTTCAATTAGAGAATCCTATATAATTCTTCTTGTCTGTCTATGATTTGACACTTGA
TCTGAAATTTTACTTATTATCATTATCATCATTAATAATAATTGTTGTACAAAAAAAAAA
AAAAA

consensusID : consensus_10855#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 321
fasta sequence

                              [GCGGCACTTCGACGGCCTGGCAACTGAAAAGACTGTTGTCCTTGCGCTGAGGGCGACCGAATACTGACCATTCAAATGCTACAGTTCGACAAAGAGGTTTACAGCATCACAATTTATTCCCCCATCCAAACCTCCCACAGTCACCCTCAGCGCAAGGACAACAGTCTTTTCAGTTGCCATCCAGTTTTTATCCGTCGATTTCACCATCGCATCAACGCGTATCACTTCAGCAGTTTGGAGGTACATCTCGTGCAGCAATCACTGGACCAATTAATCCGCAAAATGGACTTTATGGTCCAGCATTTGGTGGGGCTTCTCATC]

[+] EMBL CD193708             [GCGGCACTTCGACGGCCTGGCAACTGAAAAGACTGTTGTCCTTGCGCTGAGGGCGACCGAATACTGACCATTCAAATGCTACAGTTCGACAAAGAGGTTTACAGCATCACAATTTATTCCCCCATCCAAACCTCCCACAGTCACCCTCAGCGCAAGGACAACAGTCTTTTCAGTTGCCATCCAGTTTTTATCCGTCGATTTCACCATCGCATCAACGCGTATCACTTCAGCAGTTTGGAGGTACATCTCGTGCAGCAATCACTGGACCAATTAATCCGCAAAATGGACTTTATGGTCCAGCATTTGGTGGGGCTTCTCATC]
[-] EMBL CD093275             [                                                            ATACTAACCATTCAAATGCTACAGTTCGACAAAGAGGTTTACAGCATCACAATTTATTCCCCCATCCAAACCTCCCACAGTCACCCTCAGCGCAAGGACAACAGTCTTTTCAGTTGCCATCCAGTTTTTATCCGTCGATTTCACCATCGCATCAACGCGTATCACTTCAGCAGTT                                                                                      ]




>consensus_10855#3
GCGGCACTTCGACGGCCTGGCAACTGAAAAGACTGTTGTCCTTGCGCTGAGGGCGACCGA
ATACTGACCATTCAAATGCTACAGTTCGACAAAGAGGTTTACAGCATCACAATTTATTCC
CCCATCCAAACCTCCCACAGTCACCCTCAGCGCAAGGACAACAGTCTTTTCAGTTGCCAT
CCAGTTTTTATCCGTCGATTTCACCATCGCATCAACGCGTATCACTTCAGCAGTTTGGAG
GTACATCTCGTGCAGCAATCACTGGACCAATTAATCCGCAAAATGGACTTTATGGTCCAG
CATTTGGTGGGGCTTCTCATC

consensusID : consensus_10855#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 301
fasta sequence

                              [TGGATATCGGATATCAAATTAAATGTGAATGATGACTGTAAATTCTGTTTCATGTGAATCTTTGTCATGTATGTTATACGTTGTCTAGTAAATGGTCAACATGATGAGTGCTTGTGTTCCCGATTAGATTGTCTTTGATCCAATGATGATTCTATTGCTCGTTTTGTTTATGTTTCAATTAGAGAATCGTATATAATTGTTATTGTCTGTGTATGATTTGACACTTGATCTGAAATTTTACTTATTACCGCCCCTCATCATTAATAATAATTGTTGTACACGTTCAAAAAAAAAAAAAAAA]

[-] EMBL AI394892             [TGGATATCGGATATCAAATTAAATGTGAATGATGACTGTAAATTCTGTTTCATGTGAATCTTTGTCATGTATGTTATACGTTGTCTAGTAAATGGTCAACATGATGAGTGCTTGTGTTCCCGATTAGATTGTCTTTGATCCAATGATGATTCTATTGCTCGTTTTGTTTATGTTTCAATTAGAGAATCGTATATAATTGTTATTGTCTGTGTATGATTTGACACTTGATCTGAAATTTTACTTATTACCGCCCCTCATCATTAATAATAATTGTTGTACACGTTCAAAAAAAAAAAAAAAA]




>consensus_10855#4
TGGATATCGGATATCAAATTAAATGTGAATGATGACTGTAAATTCTGTTTCATGTGAATC
TTTGTCATGTATGTTATACGTTGTCTAGTAAATGGTCAACATGATGAGTGCTTGTGTTCC
CGATTAGATTGTCTTTGATCCAATGATGATTCTATTGCTCGTTTTGTTTATGTTTCAATT
AGAGAATCGTATATAATTGTTATTGTCTGTGTATGATTTGACACTTGATCTGAAATTTTA
CTTATTACCGCCCCTCATCATTAATAATAATTGTTGTACACGTTCAAAAAAAAAAAAAAA
A

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10855#2      ------------------------------------------------------------
consensus_10855#4      ------------------------------------------------------------
consensus_10855#0      GAGCCATTAATTCGGCACGACGGGCTTCCCGACACCTATTACTTCAAATTCTGTCTCAAA 60
consensus_10855#1      ------------------------------------------------------------
consensus_10855#3      ------------------------------------------------------------
                                                                                   

consensus_10855#2      ------------------------------------------------------------
consensus_10855#4      ------------------------------------------------------------
consensus_10855#0      CTATGCCAATGCTTCTAACTATGTAGGCGTGATTGGAGGAGGGCGACCGAATACTGACCA 120
consensus_10855#1      ------------------------------------------------------------
consensus_10855#3      ------------------------------------------------------------
                                                                                   

consensus_10855#2      ------------------------------------------------------------
consensus_10855#4      ------------------------------------------------------------
consensus_10855#0      TTCAAATGCTACAGTTCGACAAAGAGGTTTACAGCATCACAATTTATTCCCCCATCCAAA 180
consensus_10855#1      -----------ATTTCCATCATACCCAGGCAACAGCACATCAGTCTATCAAAACTCTATA 49
consensus_10855#3      ------------------------------------------------------------
                                                                                   

consensus_10855#2      ------------------------------------------------------------
consensus_10855#4      ------------------------------------------------------------
consensus_10855#0      CCTCCCACAGTCACCCTCAGCGCAAGGACAACAGTCTTTTCAGTTGCCATCCAGTTTTTA 240
consensus_10855#1      TAACACCCGCAGATAGAGTAAACATATATTCCAGTGGTCATATGGAAATAACTCTACAGA 109
consensus_10855#3      ------------------------------------------------------------
                                                                                   

consensus_10855#2      ------------------------------------------------------------
consensus_10855#4      ------------------------------------------------------------
consensus_10855#0      TCCGTCGATTTCACCATCGCATCAACGCGTATCACTTCAGCAGTTTGGAGGTACATCTCG 300
consensus_10855#1      ACTAGGAAAACTATCAAACAACCTATGTGTTCCGTCTCAACAAATGACTTATGTATCTGC 169
consensus_10855#3      ------------------------------------------------------------
                                                                                   

consensus_10855#2      ------------------------------------------------------------
consensus_10855#4      ------------------------------------------------------------
consensus_10855#0      TGCAGCAATCACTGGACCAATTAATCCGCAAAATGGACTTTATGGTCCAGCATTTGGTGG 360
consensus_10855#1      AGCGCCTTCATTATATGTCCATCCACAGTCAACTGCAATTCAGCCGGCACCTTCTCGATC 229
consensus_10855#3      ------------------------------------------------------------
                                                                                   

consensus_10855#2      ------------------------------------------------------------
consensus_10855#4      ------------------------------------------------------------
consensus_10855#0      GGCTTCTCATCCACCAAATCAAGCCACTCCACCTCCTATCGGACATCAGTTGAATCCTAT 420
consensus_10855#1      ATTTCACCATTCCTTATCAATTCCGATTCAGTCACAAATGAGTCAAGCTCGGAAGTGCAG 289
consensus_10855#3      ------------------------------------------------------------
                                                                                   

consensus_10855#2      ------------------------------------------------------------
consensus_10855#4      ------------------------------------------------------------
consensus_10855#0      AGGTTTTTATAGTAATCAGTTCCAATATCCATCTCGTCCGGACGGACTTCACTGACAAAT 480
consensus_10855#1      ACAACAGGTACCACATCAAATGGATCCATCCACATTTACTGCTGGGTATACGAGTTTTCC 349
consensus_10855#3      ------------------------------------------------------------
                                                                                   

consensus_10855#2      ------------------------------------------------------------
consensus_10855#4      ------------------------------------------------------------
consensus_10855#0      CACCCGTACAATGTGTTTCTTGACTTTTATTGTGGAGAATTATTTTCCGAGTTCTGTGCT 540
consensus_10855#1      CACGGACATAAAAAATGAATACAATTTCCCTCCGTCTATTGCTGGTTGTATTCCACCTCC 409
consensus_10855#3      ------------------------------------------------------------
                                                                                   

consensus_10855#2      -----------------------------------------------------AAGAATG 7
consensus_10855#4      ------------------------------------------------------------
consensus_10855#0      TCCATCCTAACTATATATCTTACGATCATACTGTAATCTATTCGTATTAGTCAAAGAATG 600
consensus_10855#1      TCCTTCTGTTGGCTTGTATTCAGCCATTCATCAGTCTAATTACCCACAGAATTCAGGAAG 469
consensus_10855#3      ------------------------------------------------------------
                                                                                   

consensus_10855#2      GTCACTACTTGTCTTTAAATGCACATCATCTTTCTTGTAGATCCCCT-TAGTCTTGACCA 66
consensus_10855#4      ------------------------------------------------------------
consensus_10855#0      GTCACTACTTGTCTTTAAATGCACATCATTTTTTTTGTAGATCACTTGTAGTCTTGGCCA 660
consensus_10855#1      ACATGCAATCGGATTTCCGACGACTGTAAATTCGTATTCTCTTCTTGGAAACCCTTCTGC 529
consensus_10855#3      ------------------------------------------------------------
                                                                                   

consensus_10855#2      GTTTTTCTGTAAACAGGACAATTTCTCATTATCTTTTTTCTTGTTTGTGTCAATTCTCTG 126
consensus_10855#4      ------------------------------------------------------------
consensus_10855#0      GTTTTTCTATAAACAGAACAATTTCTTTTAATCTTTTTTCTTGTTTGTGTCAATTCTCTG 720
consensus_10855#1      TACTTCTAATCTTCAAGCTGCTGGACAACCATATGCCCCAGCGATCGGACCAGCTGCTGG 589
consensus_10855#3      ------------------------------------------------------------
                                                                                   

consensus_10855#2      TATCTTTGAGTTTTTTTTATCAAATTAAATGTGTTTGATGACTGTAAATTCTGTTTCTTG 186
consensus_10855#4      ------TGGATATCGGATATCAAATTAAATGTGAATGATGACTGTAAATTCTGTTTCATG 54
consensus_10855#0      TATCTTTGAGTTTTTTTTATCAAATTAAATGTGTTTGATGACTGTAAATTCTGTTTCTTG 780
consensus_10855#1      AAACGGTGGAGGTTTATTACCTCATCCTGTTCCTCAGGGTGGTTATAACAATACACCTTG 649
consensus_10855#3      ------------------------------------------------------------
                                                                                   

consensus_10855#2      TGAATCTTTGTCATGTAT-GTTATACATTGTCTACTAAATGGTCAACATGATGATTGCTT 245
consensus_10855#4      TGAATCTTTGTCATGTAT-GTTATACGTTGTCTAGTAAATGGTCAACATGATGAGTGCTT 113
consensus_10855#0      TGAATCTTTGTCATGTAT-GTTATACATTGTCTACTAAATGGTCAACATGATGATTGCTT 839
consensus_10855#1      TCACTTCCCGACACCTATTACTTCAAATTCTGTCTCAAACT-ATGCCAATGCTTCTAACT 708
consensus_10855#3      -------------------------------GCGGCACTTCGACGGCCTGGCAACTGAAA 29
                                                           *         *        *    

consensus_10855#2      GTGTTTCCG--ACTAGATTGTCTTTGATCCAATGATGA---TTTTATTGCTCG-TTTTCT 299
consensus_10855#4      GTGTTCCCG--ATTAGATTGTCTTTGATCCAATGATGA---TTCTATTGCTCG-TTTTGT 167
consensus_10855#0      GTGTTTCCG--ACTAGATTGTCTTTGATCCAATGATGA---TTTTATTGCTCGGTTTTCT 894
consensus_10855#1      ATGTAGGCGTGATTG-GAGGAGGGCGACCGAATACTGACCATTCAAATGCTACAGTTCGA 767
consensus_10855#3      AGACTGTTGTCCTTGCGCTGAGGGCGACCGAATACTGACCATTCAAATGCTACAGTTCGA 89
                               *    *     *     ** * ***  ***   **  * ****    **   

consensus_10855#2      CTATCTTTCAATTAGAGAATCCTATATAATTCTTCTTGTC---TGTCTATGATTTGACAC 356
consensus_10855#4      TTATGTTTCAATTAGAGAATCGTATATAATTGTTATTGTC---TGTGTATGATTTGACAC 224
consensus_10855#0      CTATCTTTCAATTAGAGAATCCTATATAATTCTTCTTGTC---TGTCTATGATTTGACAC 951
consensus_10855#1      CAAAGA--GGTTTACAGCATCACAATTTATTCCCCCATCCA--CCTCCCACAGTCACCCT 823
consensus_10855#3      CAAAGA--GGTTTACAGCATCACAATTTATTCCCCCATCCAAACCTCCCACAGTCACCCT 147
                         *        *** ** ***  *  * ***        *     *     * *   *  

consensus_10855#2      TTGATCTGAAATTTTACTTATTATCATTA-TCATCA-TTAATAATAATTGTTGTACA--- 411
consensus_10855#4      TTGATCTGAAATTTTACTTATTACCGCCCCTCATCA-TTAATAATAATTGTTGTACACGT 283
consensus_10855#0      TTGATCTGAAATTTTACTTATTATCACTA-TCACCACTTAATAATAATTGTTGTACACGT 1010
consensus_10855#1      CAGCGCAAGGACAACAGTCTTTTCAGTTGCCATCCAGTTTTTATCCGTCGAT-TTCACCA 882
consensus_10855#3      CAGCGCAAGGACAACAGTCTTTTCAGTTGCCATCCAGTTTTTATCCGTCGAT-TTCACCA 206
                         *  *    *    * *  **            ** **  **    * * * * **   

consensus_10855#2      --AAAAAAAAAAAAAA-------------------------------------------- 425
consensus_10855#4      TCAAAAAAAAAAAAAAAA------------------------------------------ 301
consensus_10855#0      TCTCCCTTCTGCTCATTGGCTAACTTGATTGGTTATTCTTGTAAACAGGATATATACATA 1070
consensus_10855#1      TCGCATCA---------------------------------------------------- 890
consensus_10855#3      TCGCATCAACGCGTATCACTTCAGCAGTTTGGAGGTACATCTCGTGCAGCAATCACTGGA 266
                                                                                   

consensus_10855#2      -------------------------------------------------------
consensus_10855#4      -------------------------------------------------------
consensus_10855#0      TATATTTATATATATAAAAAAAAAAAAAAAAAAAAAAA----------------- 1108
consensus_10855#1      -------------------------------------------------------
consensus_10855#3      CCAATTAATCCGCAAAATGGACTTTATGGTCCAGCATTTGGTGGGGCTTCTCATC 321