cluster # 10858

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 10858 cluster # 10858 Sequences # 23 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10858#0 length = 1059 sequences # 17
consensus_10858#1 length = 722 sequences # 2

consensus_10858#2 length = 481 sequences # 2
consensus_10858#3 length = 275 sequences # 1
consensus_10858#4 length = 225 sequences # 1

consensusID : consensus_10858#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 17
consensus length = 1059
fasta sequence

                              [CAATTAGTTTATTCAACATATCATTACATTTTTCTTTATGAGATTTCGCCAGACGCAAAAGATTAGACACATTTGGTTGTAACTTATTAGATCGTAAGAATTTATAGAGATGTCTTGGAAATATGTGTGTACTAATGCAAGTTTTATAAAACTCCAGTTTTACCTTTTCCGATGCAATTTTGCACTTCAGATTAGCAAGTTCATCTAACCGTTTAGTGCAAGACGAAGGGAGTCTTCTTTTCAAGAATTTAAAGCAATTAGTCCCTTTTATAAATTTCGATAGAACAATGAGAAGACGTAGTTGATCTGAAAAATGTGATGTATTTGCGCTATACATTTCGAACAATCTGGTCACACATATACTTGTCAAGGCATTTTTATATGAAAATTAATAAAGGTCAAACAAACAAATAAATAAAAGTACAACTAAAATAACTAAGGGGGGAGAAAGAATAAGAAATTGTCGCGTTATTCTAGGCCATAGAATGACTTAAGGATTACCAAGGTAAATTCAAGGTTACGACAAATTGTTTTTGTACACATAAGGGGGGTTTAAATTTACGAATAGCTAAGGCTTCAATAAACTTAAGAATTCGACCTTGACAATTTCTATA-CAACATTCTAAATGCTGTATTAATGTTAATTTTGTGCCCCGTCTCAATAATGTGTTTTGCTATCGATGAACATGGTTTTCTACCGCCTACATTGATC-GGATCATTTGACACACACTGATTTTGAAGCCATCTGGGTACATGTTCATTGACCCTTGA-TTGCATTGTTCGATTACTCCTCCCTATGTATGTGTGTCCACACAAACATGTAAATTGGTAAATACAATGGGATGTGACGTAATCATTAGTGCATTGTTTGGGTCTATTATGAATCATGGCCTTAGACTTTTCAATCACTACCAACTGAGCAGCATAATACGTATTCTCAATGGCTGCTTTCAATCTCTGCCTTAAAACTATACTGTTTGATTCGCCTCTATATGGTAGATTGATGTAAACCTTTTTCTTTGGCACTTCATACAGTAGACATCTTGGCATTAATTGACTT]

[+] EMBL CD123512             [CAATTAGTTTATTCAACATATCATTACATTTTTCTTTATGAGATTTCGCCAGACGCAAAAGATTAGACACATTTGGTTGTAACTTATTAGATCGTAAGAATTTATAGAGATGTCTTGGAAATATGTGTGTACTAATGCAAGTTTTATAAAACTCCAGTTTTACCTTTTCCGATGCAATTTTGCACTTCAGATTAGCAAGTTCATCTAACCGTTTAGTGCAAGACGAAGGGAGTCTTCTTTTCAAGAATTTAAAGCAATTAGTCCCTTTTATAAATTTCGATAGAACAATGAGAAGACGTAGTTGATCTGAAAAATGTGATGTATTTGCGCTATACATTTCGAACAATCTGGTCACACATATACTTGTCAAGGCATTTTTATATGAAAATTAATAAAGGTCAAACAAACAAATAAATAAAAGTACAACTAAAATAACTAAGGGGGGAGAAAGAATAAGAAATTGTCGCGTTATTCTAGGCAATAGAATGACTTAAGGATTACCAAGGTAAATTCAAGGTTACGACAAATTGTTTTTGTACACATAAGGGGGGTTTAAATTTACGAATAGCTAAGGCTTCAATAAACTTAAGAATTCGACCTTGACAATTTCTATANNCACATTCT AATGCTGTATTA                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD123478             [CAATTAGCTTATTCAACATATCATTACATTTTTCTTTATGAGATTTCGCCAGACGCAAAAGATTAGACACATTTGGTTGTAACTTATTAGATCGTAAGAATTTATAGAGATGTCTTGGAAATATGTGTGTACTAATGCAAGTTTTATAAAACTCCAGTTTTACCTTTTCCGATGCAATTTTGCACTTCAGATTAGCAAGTTCATCTAACCGTTTAGTGCAAGACGAAGGGAGTCTTCTTTTCAAGAATTTAAAGCAATTAGTCCCTTTTATAAATTTCGATAGAACAATGAGAAGACGTAGTTGATCTGAAAGATGTGATGTATTTGCGCTATACATTTCGAACAATCTGGTCACACATATACTTGTCAAGGCATTTTTATATGAAAATTAATAAAGGTCAAACAAACAAATAAATAAAAGTACAACTAAAATAACTAAGGGGGGAGAAAGAATAAGAAATTGTCGCGTTATTCTAGGCCATAGAATGACTTAAGGATTACCAAGGTAAATTCAAGGTTACGACAAATTGTTTTTGTACACATAAGGGGGGTTTAAATTTACGAATAGCTAAGGCTTCAATAAACTTAAGAATTCGACCTTGACAATTTCTATA NCACATTCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD123497             [CAATTAGTTTATTCAACATATCATTACATTTTTCTCTATGAGATTTCGCCAGACGCAAAAGATTAGACACATTTGGTTGTAACTTATTAGATCGTAAGAATTTATAGAGATGTCTTGGAAATATGTGTGTACTAATGCAAGTTTTATAAAACTCCAGTTTTACCTTTTCCGATGCAATTTTGCACTTCAGATTAGCAAGTTCATCTAACCGTTTAGTGCAAGACGAAGGGAGTCTTCTTTTCAAGAATTTAAAGCAATTAGTCCCTTTTATAAATTTCGATAGAACAATGAGAAGACGTAGTTGATCTGAAAAATGTGATGTATTTGCGCTATACATTTCGAACAATCTGGTCACACATATACTTGTCAAGGCATTTTTATATGAAAATTAATAAAGGTCAAACAAACAAATAAATAAAAGTACAACTAAAATAACTAAGGGGGGAGAAAGAATAAGAAATTGTCGCGTTATTCTAGGCCATAGAATGACTTAAGGATTACCAAGGTAAATTCAAGGTTACGACAAATTGTTTTTGTACACATAAGGGGGGTTTAAATTTACGAATAGCTAAGGCTTCAATAAACTTAAGAATTCGACCTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD123464             [CAATTAGTTTATTCAACATATCATTACATTTTTCTTTATGAGATTTCGCCAGACGCAAAAGATTAGACACATTTGGTTGTAACTTATTAGACCGTAAGAATTTATAGAGATGTCTTGGAAATATGTGTGTACTAATGCAAGTTTTATAAAACTCCAGTTTTACCTTTTCCGATGCAATTTTGCACTTCAGATTAGCAAGTTCATCTAACCGTTTAGTGCAAGACGAAGGGAGTCTTCTTTTCAAGAATTTAAAGCAATTAGTCCCTTTTATAAATTTCGATAGAACAATGAGAAGACGTAGTTGATCTGAAAAACGTGATGTATTTGCGCTATACATTTCGAACAATCTGGTCACACATATACTTGTCAAGGCATTTTTATATGAAAATTAATAAAGGTCAAACAAACAAATAAATAAAAGTACAACTAAAATAACTAAGGGGGGAGAAAGAATAAGAAATTGTCGCGTTATTCTAGGCCATAGAATGACTTAAGGATTACCAAGGTAAATTCAAGGTTACGACAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD153583             [                                                                                                                                                                                                                                                                                                                                                                                                                            AAATAAAAGTACAACTAAAATAACTAAGGGGGGAGAAAGAATAAGAAATTGTCGCGTTATTCTAGGCCATAGAATGACTTAAGGATTACCAAGGTAAATTCAAGGTTACGACAAATTGTTTTTGTACACATAAGGGGGGTTTAAATTTACGAATAGCTAAGGCTTCAATAAACTTAAGAATTCGACCTTGACAATTTCTATA CAACATTCTAAATGCTGTATTAATGTTAATTTTGTGCCCCGTCTCAATAATGTGTTTTGCTATCGATGAACATGGTTTTCTACCGCCTACATTGATC GGATCATTTGACACACACTGATTTTGAAGCCATCTGGGTACATG                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD088758             [                                                                                                                                                                                                                                                                                                                                                                                                                            AAATAAAAGTACAACTAAAATAACTAAGGGGGGAGAAAGAATAAGAAATTGTCGCGTTATTCTAGGCCATAGAATGACTTAAGGATTACCAAGGTAAATTCAAGGTTACGACAAATTGTTTTTGTACACATAAGGGGGGTTTAAATTTACGAATAGCTAAGGCTTCAATAAACTTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD153573             [                                                                                                                                                                                                                                                                                                                                                                                                                             AATAAAAGTACAACTAAAATAACTAAGGGGGGAGAAAGAATAAGAAATTGTCGCGTTATTCTAGGCCATAGAATGACTTAAGGATTACCAAGGTAAATTCAAGGTTACGACAAATTGTTTTTGTACACATAAGGGGGGTTTAAATTTACGAATAGCTAAGGCTTCAATAAACTTAAGAATTCGACCTTGACAATTTCTATA CAACATTCTAAATGCTGTATTAATGTTAATTTTGTGCCCCGTCTCAATAATGTGTTTTGCTATCGATGAACATGGTTTTCTACCGCCTACATTGATC GGATCATTTGACACACACTGATTTTGAAGCCATCTGGGTACATGT                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD123518             [                                                                                                                                                                                                                                                                                                                                                                                                                                AAAAGTACAACTAAAATAACTAAGGGGGGAGAAAGAATAAGAAATTGTCACGTTATTCTAGGCCATAGAATGACTTAAGGATTACCAAGGTAAATTCAAGGTTACGACAAATTGTTTTTGTACACATAAGGGGGGTTTAAATTTACGAATAGCTAAGGCTTCAATAAACTTAAGAATTCGACCTTGACAATTTCTATA CAACATTCTAAATGCTGCATTAATGTTAATTTTGTGCCCCGTCTCAATAATGTGTTTTGCTATCGATGAACATGGTTTTCTACCGCCTACATTGATC GGATCATTTGACACACACTGATTTTGAAGCCATCTGGGTACATGTTCATTGACCCTTGA TTGCATTGTTCGATTACTCCTCCCTATGTATGTGTGTCCACACAAACATGTAAATTGGTAAATACAATGGGATGTGACGTAATCATTAGTGCATTGTTTGGGTCTATTATGAATCATGGCCTTAGACTTTTCAATCACTACCAACTGAGCAGCATAATACGTATTCTCAATGGCTGCTTTCA                                                                                                           ]
[-] EMBL CD123472             [                                                                                                                                                                                                                                                                                                                                                                                                                                  AAGTACAACTAAAATAACTAAGGGGGGAGAAAGAATAAGAAATTGTCGCGTTATTCTAGGCCATAGAATGACTTAAGGATTACCAAGGTAAATTCAAGGTTACGACAAATTGTTTTTGTACACATAAGGGGGGTTTAAATTTACGAATAGCTAAGGCTTCAATAAACTTAAGAATTCGACCTTGACAATTTCTATA CAACATTGTAAATGCTGTATTAATGTTAATTTTGTGCCCCGTCTCAATAATGTGTTTTGCTATCGATGAACATGGTTTTCTACCGCCTACATTGATC GGATCATTTGACACACACTGATTTTGAAGCCATCTGGGTACATGTTCATTGACCCTTGA TTGCATTGTTCGATTACTCCTCCCTATGTATGTGTGTCCACACAAACATGTAAATTGGTAAATACAATGGGATGTGACGTAATCATTAGTGCATTGTTTGGGTCTATTATGAATCATGGCCTTAGACTTTTCAATCACTACCAACTGAGCAGCATAATACGTATTCTCAATGGCTGCTTTCA                                                                                                           ]
[-] EMBL CD123471             [                                                                                                                                                                                                                                                                                                                                                                                                                                  AAGTACAACTAAAATAACTAAGGGGGGAGAAAGAATAAGAAATTGTCGCGTTATTCTAGGCCATAGAATGACTTAAGGATTACCAAGGTAAATTCAAGGTTACGACAAATTGTTTTTGTACACATAAGGGGGGTTTAAATTTACGAATAGCTAAGGCTTCAATAAACTTAAGAATTCGACCTTGACAATTTCTATA CAACATTCTAAATGCTGTATTAATGTTAATTTTGTGCCCCGTCTCAATAATGTGTTTTGCTATCGATGAACATGGTTTTCTACCGCCTACATTGATC GGATCATTTGACACACACTGATTTTGAAGCCATCTGGGTACATGTTCATTGACCCTTGA TTGCATTGTTCGATTACTCCTCCCTATGTATGTGTGTCCACACAAACATGTAAATTGGTAAATACAATGGGATGTGACGTAATCATTAGTGCATTGTTTGGGTCTATTATGAATCATGGCCTTAGACTTTTCAATCACTACCAACTGAGCAGCATAATACGTATTCTCAATGGCTGCTTTCA                                                                                                           ]
[+] EMBL CD090341             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TAAGGCTTCAATAAACTTAAGAATTCGACCTTGACAATTTCTATA CAACATTCTAAATGCTGTATTAATGTTAATTTTGTGCCCCGTCTCAATAATGTGTTTTGCTATCGATGAACATGGTTTTCTACCGCCTACATTGATC GGATCATTTGACACACACTGATTTTGAAGCCATCT GGTACATGTTCATTGAC                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD123458             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          atTTTTAAATGCTGTATTAATGTTAATTTTGTGCCCCGTCTCAATAATGTGTTTTGCTATCGATGAACAATGTTTTCTACCGCCTACATTGATC GGATCATTTGACACACACTGATTTTGAAGCCATCTGGGTACATGTTCATTGACCCTTGA TTGCATTGTTCGATTACTCCTCCCTATGTATGTGTGTCCACACAAACATGTAAATTGGTAAATACAATGGGATGTGACGTAA                                                                                                                                                                                                               ]
[-] EMBL CD090415             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AATGTG TTTGCTATCGATGAACATGGTTTTCTACCGCCTACATTGATC GGATCATTTGACACACACTGATTTGNAAGCCATCTGGGTACATGTTCATTGACCCTTGA TTGCATTGTTCGATTACTCCTCCCTATGTATGTGTGTCCACACAAACATGTAAATTGGTAAATACAATGGGATGTGACGTAATCATTAGTGCATTGTTTGGGTCTATTATGAATCATGGCCTTAGACTTTTCAATCACTACCAACTGAGCAGCATAATACGTATTCTCAATGGCTGCTTTCAATCTCTGCCTTAAAACTATACTGTTTGATTCGCCTCTATATGGTAGATTGATGTAAACCTTTTTCTTTGGCACTTCATACAGGAGACATCTa               ]
[-] EMBL CD090378             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GATCGGGATCATTTGACACACACTGA TTTGAAGCCATCTGGGTACATGTTCATTGACCC TGATTTGCATTGTTCGATTACTCCTCCCTATGTATGTGTGTCCACACAAACATGTAAATTGGTAAATACAATGGGATGTGACGTAATCATTAGTGCATTGTTTGGGTCTATTATGAATCATGGCCTTAGACTTTTCAATCACTACCAACTGAGCAGCATAATACGTATTCTCAATGGCTGCTTTCAATCTCTGCCTTAAAACTATACTGTTTGATTCGCCTCTATATGGTAGATTGATGTAAACCTTTTT                                           ]
[-] EMBL CD090363             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TGTG CCACACAAACATGTAAATCGGTAAATACAATGGGATGTGACGTAATCATTAGTGCATTGTTTGGGTCTATTATGAATCATGGCCTTAGACTTTTCAATCGCTACCAGCTGAGCAGCATAATACGTATTCTCAATGGCTGCTTTCAATCTCTGCCTTAAAACTATACTGTTTGATTCGCCTCTATATGGTAGATTGATGTAATCCTTTTTCTTTGGCACTTCATACAGTA                       ]
[-] EMBL CD090339             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       gtAATCGGTANATACAATGGGATGTGACGTATNCATTAGTGCA TGTTTGGGTCTATTATGAATCATGGCCTTAGACTTTTCAATCACTACCAACTGAGCAGCATAATACGTATTCTCAATGGCTGCTTTCAATCTCTGCCTTAAAACTATACTGTTTGATTCGCCTCTATATGGTAGATTGATGTAAACCTTTTTCTTTGGCACTTCATACAGTAGACATgct               ]
[-] EMBL CD090328             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TGCATTGTTTGGGTCTATTATGAATCATGGCCTTAGACTTTTCAATCACTACCAACTGAGCAGCATAATACGTATTCTCAATGGCTGCTTTCAATCTCTGCCTTAAAACTATACTGTTTGATTCGCCTCTATATGGTAGATTGATGTAAACCTTTTTCTTTGGCACTGAATAAATTAGAGGTCTTGGCATTAATTGACTT]




>consensus_10858#0
CAATTAGTTTATTCAACATATCATTACATTTTTCTTTATGAGATTTCGCCAGACGCAAAA
GATTAGACACATTTGGTTGTAACTTATTAGATCGTAAGAATTTATAGAGATGTCTTGGAA
ATATGTGTGTACTAATGCAAGTTTTATAAAACTCCAGTTTTACCTTTTCCGATGCAATTT
TGCACTTCAGATTAGCAAGTTCATCTAACCGTTTAGTGCAAGACGAAGGGAGTCTTCTTT
TCAAGAATTTAAAGCAATTAGTCCCTTTTATAAATTTCGATAGAACAATGAGAAGACGTA
GTTGATCTGAAAAATGTGATGTATTTGCGCTATACATTTCGAACAATCTGGTCACACATA
TACTTGTCAAGGCATTTTTATATGAAAATTAATAAAGGTCAAACAAACAAATAAATAAAA
GTACAACTAAAATAACTAAGGGGGGAGAAAGAATAAGAAATTGTCGCGTTATTCTAGGCC
ATAGAATGACTTAAGGATTACCAAGGTAAATTCAAGGTTACGACAAATTGTTTTTGTACA
CATAAGGGGGGTTTAAATTTACGAATAGCTAAGGCTTCAATAAACTTAAGAATTCGACCT
TGACAATTTCTATACAACATTCTAAATGCTGTATTAATGTTAATTTTGTGCCCCGTCTCA
ATAATGTGTTTTGCTATCGATGAACATGGTTTTCTACCGCCTACATTGATCGGATCATTT
GACACACACTGATTTTGAAGCCATCTGGGTACATGTTCATTGACCCTTGATTGCATTGTT
CGATTACTCCTCCCTATGTATGTGTGTCCACACAAACATGTAAATTGGTAAATACAATGG
GATGTGACGTAATCATTAGTGCATTGTTTGGGTCTATTATGAATCATGGCCTTAGACTTT
TCAATCACTACCAACTGAGCAGCATAATACGTATTCTCAATGGCTGCTTTCAATCTCTGC
CTTAAAACTATACTGTTTGATTCGCCTCTATATGGTAGATTGATGTAAACCTTTTTCTTT
GGCACTTCATACAGTAGACATCTTGGCATTAATTGACTT

consensusID : consensus_10858#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 722
fasta sequence

                              [GAATATTCTTTTAATAATTTCTCATCAGCGTTCTACAATTATAAATCAATAATCCATATAAAAGTGGCCAAGTTTAAGGCAGAGTACATCATTTAAGAAGCTGTAACATGTGAATCAAGGAGTGTTTGTGTTATCAAATCAAGTCAAATCGTTAATGTTCGAGCTGACTAATGTGAAGTGTTAACTTGAATCAGTTTATAAGTGAAATAAAATCGTAAGATAAATGATTAGAATATATATAGTTGACATGGGGTGAGAGATAAAAAAATGGGATTACAAATCAGAAATTACGTAATATGTAGAATAATATGAATTAGGTCAGATATAGTAAATAGGGGTGGATGCTGAATAAATTTCTCTAAAAGGTTAGCAAGTGTGATAATAATAATAATGACAGTGGTAAGATGTGTAGCTAAAATAAGTTTACGATATAAAAATGAACATTAATCAGATTAATGTCACCATATTACAAAATTGATTATTAACAAGTTGACCCAGAAGTTGGCCAGGGTAAAAGGAGCGGCTGGACATATTTCTTTTGGATGCAAAGCTCTGGCTTTTTGATCCGAATAGTAATTGCCTCAGGCGTCTGCAGGATTCTCACTCTGACTGAATTAAGTAGACTGCTGTTAACACGACATATATTTTTGAGAAAAATTGCTCGACGTTGGCTCTATGTCCCATCTGAATTAAATGGGCTAAAATATTATTATTATCATTAT]

[+] EMBL CD073625             [GAATATTCTTTTAATAATTTCTCATCAGCGTTCTACAATTATAAATCAATAATCCATATAAAAGTGGCCAAGTTTAAGGCAGAGTACATCATTTAAGAAGCTGTAACATGTGAATCAAGGAGTGTTTGTGTTATCAAATCAAGTCAAATCGTTAATGTTCGAGCTGACTAATGTGAAGTGTTAACTTGAATCAGTTTATAAGTGAAATAAAATCGTAAGATAAATGATTAGAATATATATAGTTGACATGGGGTGAGAGATAAAAAAATGGGATTACAAATCAGAAATTACGTAATATGTAGAATAATATGAATTAGGTCAGATATAGTAAATAGGGGTGGATGCTGAATAAATTTCTCTAAAAGGTTAGCAAGTGTGATAATAATAATAATGACAGTGGTAAGATGTGTAGCTAAAATAAGTTTACGATATAAAAATGAACATTAATCAGATTAATGTCACCATATTACAAAATTGATTATTAACAAGTTGACCCAGAAGTTGGCCAGGGTAAAAGGAGCGGCTGGACATATTTCTTTTGGATGCAAAGCTCTGGCTTTTTGATCCGAATAGTAATTGCCTCAGGCGTCTGCAGGATTCTCACTCTGAC                                                                                                                ]
[+] EMBL CD066936             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CATATTTCTTTTGGATGCAAAACTCTGGCTTTTTGATCCGAATAGCGATTGCCTCAGCCGTCTGCACGATTCTCACTCTGACTGAATTAAGTAGACTGCTGTTAACACGACATATATTTTTGAGAAAAATTGCTCGACGTTGGCTCTATGTCCCATCTGAATTAAATGGGCTAAAATATTATTATTATCATTAT]




>consensus_10858#1
GAATATTCTTTTAATAATTTCTCATCAGCGTTCTACAATTATAAATCAATAATCCATATA
AAAGTGGCCAAGTTTAAGGCAGAGTACATCATTTAAGAAGCTGTAACATGTGAATCAAGG
AGTGTTTGTGTTATCAAATCAAGTCAAATCGTTAATGTTCGAGCTGACTAATGTGAAGTG
TTAACTTGAATCAGTTTATAAGTGAAATAAAATCGTAAGATAAATGATTAGAATATATAT
AGTTGACATGGGGTGAGAGATAAAAAAATGGGATTACAAATCAGAAATTACGTAATATGT
AGAATAATATGAATTAGGTCAGATATAGTAAATAGGGGTGGATGCTGAATAAATTTCTCT
AAAAGGTTAGCAAGTGTGATAATAATAATAATGACAGTGGTAAGATGTGTAGCTAAAATA
AGTTTACGATATAAAAATGAACATTAATCAGATTAATGTCACCATATTACAAAATTGATT
ATTAACAAGTTGACCCAGAAGTTGGCCAGGGTAAAAGGAGCGGCTGGACATATTTCTTTT
GGATGCAAAGCTCTGGCTTTTTGATCCGAATAGTAATTGCCTCAGGCGTCTGCAGGATTC
TCACTCTGACTGAATTAAGTAGACTGCTGTTAACACGACATATATTTTTGAGAAAAATTG
CTCGACGTTGGCTCTATGTCCCATCTGAATTAAATGGGCTAAAATATTATTATTATCATT
AT

consensusID : consensus_10858#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 481
fasta sequence

                              [TTAAGGATTACCAGGGTAAATTCAAGGTTACGACAAATTATTTTTGTACACATAAAGGGGGGGGGGCAA-TTACGAATAACCAAGGCTTCGATAAACTTACGAATTCGTCCTTGACAATTTCTATACATTATTTTAAAAGCTGTATTGATATCGATTCTGTGTCCCATTTCATTTCATTGACCTTTATTAATCTTCATATAAAACATCCTGACAAGTATATAGGTGAACAGATTGTTGGAAATGTATAGATCAAATACAACACATTTTTCAGAACAACTCCGCCTTCTCATTACTCTATCGAAATGTGATTGTGTGAGAGATATGTCTTTATGTATATATCTGTATGTGAGTTGGCATTGAAAATATTGTAGCTGTGATACCAACAAACAGATCAATTTGTATATCCTAGTTGGTTTTATTAGGGGGCCATACCCCGAGCCTTTTACCTAGAGATCTATTCCACACGAGAGTGAAGCAATGT]

[+] EMBL CD090942             [TTAAGGATTACCAGGGTAAATTCAAGGTTACGACAAATTATTTTTGTACACATAAAGGGGGGGGGGCAA TTACGAATAACCAAGGCTTCGATAAACTTACGAATTCGTCCTTGACAATTTCTATACATTATTTTAAAAGCTGTATTGATATCGATTCTGTGTCCCATTTCATTTCATTGACCTTTATTAATCTTCATATAAAACATCCTGACAAGTATATAGGTGAACAGATTGTTGGAAATGTATAGATCAAATACAACACATTTTTCAGAACAACTCCGCCTTCTCATTACTCTATCGAAATGTGATTGTGTGAGAGATATGTCTTTATGTATATATCTGTATGTGAGTTGGCATTGAAAATATTGTAGCTGTGATACCAACAAACAGATCAATTTGTATATCCTAGTTGGTTTTATTAGGGGGCCATACCCCGAGCCTTTTACCTAGAGATCTATTCCACACGAGAGTGAAGCAATGT]
[+] EMBL CD091015             [TTAAGGATTACCAGGGTAAATTCAAGGTTACGACAAATTATTTTTGTACACATAAAGGGGGGGGGGCAATTTACGAATAACCAAGGCTTCGATAAACTTACGAATTCGTCCTTGACAATTTCTATACATTATTTTAAAAGCTGTATTGATATCGATTCTGTGTCCCATTTCATTTCATTGACCTTTATTAATCTTCATATAAAATATCCTGACAAGTATATAGGTGAACAGATTGTTGGAAATGTATAGATCAAATACAACACATTTTTCAGAACAACTCCGCCTTCTCATTACTCTATCGAAATGTGATTGTGTGAGAGATATGTCTTTATGTATATATCTGTATGTGAGTTGNCATTGAACATATTGCAGCTGTGATACCANCACACAGATCAATTTGCATATC                                                                            ]




>consensus_10858#2
TTAAGGATTACCAGGGTAAATTCAAGGTTACGACAAATTATTTTTGTACACATAAAGGGG
GGGGGGCAATTACGAATAACCAAGGCTTCGATAAACTTACGAATTCGTCCTTGACAATTT
CTATACATTATTTTAAAAGCTGTATTGATATCGATTCTGTGTCCCATTTCATTTCATTGA
CCTTTATTAATCTTCATATAAAACATCCTGACAAGTATATAGGTGAACAGATTGTTGGAA
ATGTATAGATCAAATACAACACATTTTTCAGAACAACTCCGCCTTCTCATTACTCTATCG
AAATGTGATTGTGTGAGAGATATGTCTTTATGTATATATCTGTATGTGAGTTGGCATTGA
AAATATTGTAGCTGTGATACCAACAAACAGATCAATTTGTATATCCTAGTTGGTTTTATT
AGGGGGCCATACCCCGAGCCTTTTACCTAGAGATCTATTCCACACGAGAGTGAAGCAATG
T

consensusID : consensus_10858#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 275
fasta sequence

                              [TCAATAATGTGTTTTGCTATCGATGAACATGGTTTTCTACCGCNTACATTGATCGGATCATTTGACACACACTGATTTTGAAGCCATCTGGGTACATGTTCANTGACTCTTGATTGCATTGTTCGAGTAGTCCCCCCCACGCCATGTGTGTGGCGCGCCCACAACGTAAAATTGTGGTCCCACGGGGATGAGCGGTATCACTGGCTGTTGGGTNTAAAATATCAGGCCTAGACTTCATCATCCAATGAGCAGCATAAAGTATTCAATGGTGCTTT]

[-] EMBL CD123483             [TCAATAATGTGTTTTGCTATCGATGAACATGGTTTTCTACCGCNTACATTGATCGGATCATTTGACACACACTGATTTTGAAGCCATCTGGGTACATGTTCANTGACTCTTGATTGCATTGTTCGAGTAGTCCCCCCCACGCCATGTGTGTGGCGCGCCCACAACGTAAAATTGTGGTCCCACGGGGATGAGCGGTATCACTGGCTGTTGGGTNTAAAATATCAGGCCTAGACTTCATCATCCAATGAGCAGCATAAAGTATTCAATGGTGCTTT]




>consensus_10858#3
TCAATAATGTGTTTTGCTATCGATGAACATGGTTTTCTACCGCNTACATTGATCGGATCA
TTTGACACACACTGATTTTGAAGCCATCTGGGTACATGTTCANTGACTCTTGATTGCATT
GTTCGAGTAGTCCCCCCCACGCCATGTGTGTGGCGCGCCCACAACGTAAAATTGTGGTCC
CACGGGGATGAGCGGTATCACTGGCTGTTGGGTNTAAAATATCAGGCCTAGACTTCATCA
TCCAATGAGCAGCATAAAGTATTCAATGGTGCTTT

consensusID : consensus_10858#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 225
fasta sequence

                              [ACATCACATTTTCAGAGATCAACTACGTCTTCTCATTGTTCTATCGAAATTTATAAAAGGGACTAATTGCTTTAAATTAACGATTTTATTTTATATTACAAACACTCCTTGATTCACATGTTACAGTTTCCTAAATGATGTACTCTGCCTTAAACTTGGCCAATTTTATATGGATTATTAATTTATAATTGTAGAACCTGATGAGAAATTATTGAAAAGAATATT]

[+] EMBL AW053297             [ACATCACATTTTCAGAGATCAACTACGTCTTCTCATTGTTCTATCGAAATTTATAAAAGGGACTAATTGCTTTAAATTAACGATTTTATTTTATATTACAAACACTCCTTGATTCACATGTTACAGTTTCCTAAATGATGTACTCTGCCTTAAACTTGGCCAATTTTATATGGATTATTAATTTATAATTGTAGAACCTGATGAGAAATTATTGAAAAGAATATT]




>consensus_10858#4
ACATCACATTTTCAGAGATCAACTACGTCTTCTCATTGTTCTATCGAAATTTATAAAAGG
GACTAATTGCTTTAAATTAACGATTTTATTTTATATTACAAACACTCCTTGATTCACATG
TTACAGTTTCCTAAATGATGTACTCTGCCTTAAACTTGGCCAATTTTATATGGATTATTA
ATTTATAATTGTAGAACCTGATGAGAAATTATTGAAAAGAATATT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10858#0      CAATTAGTTTATTCAACATATCATTACATTTTTCTTTATGAGATTTCGCCAGACGCAAAA 60
consensus_10858#3      ------------------------------------------------------------
consensus_10858#2      ------------------------------------------------------------
consensus_10858#4      ------------------------------------------------------------
consensus_10858#1      ------------------------------------------------------------
                                                                                   

consensus_10858#0      GATTAGACACATTTGGTTGTAACTTATTAGATCGTAAGAATTTATAGAGATGTCTTGGAA 120
consensus_10858#3      ------------------------------------------------------------
consensus_10858#2      ------------------------------------------------------------
consensus_10858#4      ------------------------------------------------------------
consensus_10858#1      ------------------------------------------------------------
                                                                                   

consensus_10858#0      ATATGTGTGTACTAATGCAAGTTTTATAAAACTCCAGTTTTACCTTTTCCGATGCAATTT 180
consensus_10858#3      ------------------------------------------------------------
consensus_10858#2      ------------------------------------------------------------
consensus_10858#4      ------------------------------------------------------------
consensus_10858#1      ------------------------------------------------------------
                                                                                   

consensus_10858#0      TGCACTTCAGATTAGCAAGTTCATCTAACCGTTTAGTGCAAGACGAAGGGAGTCTTCTTT 240
consensus_10858#3      ------------------------------------------------------------
consensus_10858#2      ------------------------------------------------------------
consensus_10858#4      ------------------------------------------------------------
consensus_10858#1      ------------------------------------------------------------
                                                                                   

consensus_10858#0      TCAAGAATTTAAAGCAATTAGTCCCTTTTATAAATTTCGATAGAACAATGAGAAGACGTA 300
consensus_10858#3      ------------------------------------------------------------
consensus_10858#2      ------------------------------------------------------------
consensus_10858#4      ------------------------------------------------------------
consensus_10858#1      ------------------------------------------------------------
                                                                                   

consensus_10858#0      GTTGATCTGAAAAATGTGATGTATTTGCGCTATACATTTCGAACAATCTGGTCACACATA 360
consensus_10858#3      ------------------------------------------------------------
consensus_10858#2      ------------------------------------------------------------
consensus_10858#4      ------------------------------------------------------------
consensus_10858#1      ---------------------------------GAATATTCTTTTAATAATTTCTCATCA 27
                                                                                   

consensus_10858#0      TACTTGTCAAGGCATTTTTATATGAAAATTAATAAAGGTCAAACAAACAAATAAATAAAA 420
consensus_10858#3      ------------------------------------------------------------
consensus_10858#2      ------------------------------------------------------------
consensus_10858#4      ------------------------------------------------------------
consensus_10858#1      GCGTTCTACAATTATAAATCAATAATCCATATAAAAGTGGCCAAGTTTAAGGCAGAGTAC 87
                                                                                   

consensus_10858#0      GTACAACTAAAATAACTAAGGGGGGAGAAAGAATAAGAAATTGTCGCGTTATTCTAGGCC 480
consensus_10858#3      ------------------------------------------------------------
consensus_10858#2      ------------------------------------------------------------
consensus_10858#4      ------------------------------------------------------------
consensus_10858#1      ATCATTTAAGAAGCTGTAACATGTGAATCAAGGAGTGTTTGTGTTATCAAATCAAGTCAA 147
                                                                                   

consensus_10858#0      ATAGAATGACTTAAGGATTACCAAGGTAAATTCAAGGTTACGACAAATTGTTTTTGTACA 540
consensus_10858#3      ------------------------------------------------------------
consensus_10858#2      ----------TTAAGGATTACCAGGGTAAATTCAAGGTTACGACAAATTATTTTTGTACA 50
consensus_10858#4      ------------------------------------------------------------
consensus_10858#1      ATCGTTAATGTTCGAGCTGACTAATGTGAAGTGTTAACTTGAATCAGTTTATAAGTGAAA 207
                                                                                   

consensus_10858#0      CATAAGGGGGGTTTAA-ATTTACGAATAGCTAAGGCTTCAATAAACTTAAGAATTCGACC 599
consensus_10858#3      ------------------------------------------------------------
consensus_10858#2      CATAAAGGGGGGGGGGCAATTACGAATAACCAAGGCTTCGATAAACTTACGAATTCGTCC 110
consensus_10858#4      ------------------------------------------------------------
consensus_10858#1      TAAAATCGTAAGATAAATGATTAGAATATATATAGTTGACATGGGGTGAGAGATAAAAAA 267
                                                                                   

consensus_10858#0      TTGACAATTTCTATACAACATTCTAAATGCTGTAT--TAATGTTAATTTTGTGCCCCGTC 657
consensus_10858#3      ------------------------------------------------------------
consensus_10858#2      TTGACAATTTCTATACATTATTTTAAAAGCTGTAT--TGATATCGATTCTGTGTCCCATT 168
consensus_10858#4      ------------------------------------------------------------
consensus_10858#1      ATGGGATTACAAATCAGAAATTACGTAATATGTAGAATAATATGAATTAGGTCAGATATA 327
                                                                                   

consensus_10858#0      TCAAT--AATGTGTTTTGCTA-TCGATGAACATGGTTTTCTACCGCCTACAT---TGATC 711
consensus_10858#3      TCAAT--AATGTGTTTTGCTA-TCGATGAACATGGTTTTCTACCGCNTACAT---TGATC 54
consensus_10858#2      TCATTTCATTGACCTTTATTAATCTTCATATAAAACATCCTGACAAGTATATAGGTGAAC 228
consensus_10858#4      -----ACATCACATTTTCAGA---GATCAACTACGTCTTCTCATTGTTCTAT---CGAAA 49
consensus_10858#1      GTAAATAGGGGTGGATGCTGAATAAATTTCTCTAAAAGGTTAGCAAGTGTGATAATAATA 387
                                      *    *                   *      *         *  

consensus_10858#0      GGATCATTTGACACACACTGATTT--TGAAGCCATCTG--GGTACATGT--------TCA 759
consensus_10858#3      GGATCATTTGACACACACTGATTT--TGAAGCCATCTG--GGTACATGT--------TCA 102
consensus_10858#2      AGATTGTTGGAAATGTATAGATCAAATACAACACATTT--TTCAGAACA--------ACT 278
consensus_10858#4      TTTATAAAAGGGACTAATTGCTTTAAATTAACGATTTTATTTTATATTA--------CAA 101
consensus_10858#1      ATAATGACAGTGGTAAGATGTGTAGCTAAAATAAGTTTACGATATAAAAATGAACATTAA 447
                                *         *         *      *      * *              

consensus_10858#0      TTGACCCTTGATTGCATTGTTCGATTACTCCTCCCTATGT-ATGTGTGTC-CACACAAAC 817
consensus_10858#3      NTGACTCTTGATTGCATTGTTCGAGTAGTCCCCCCCACGCCATGTGTGTGGCGCGCCCAC 162
consensus_10858#2      CCGCCTTCTCATTACTCTATCGAAATGTGATTGTGTGAGAGATATGTCTT-TATGTATAT 337
consensus_10858#4      ACACTCCTTGATTCACATGTTACAGTTTCCTAAATGATGTACTCTGCCTTAAACTTGGCC 161
consensus_10858#1      TCAGATTAATGTCACCATATTACAAAATTGATTATTAACAAGTTGACCCAGAAGTTGGCC 507
                                  *     * *   *                  *                 

consensus_10858#0      A-TGTAAATTG-GTAAATACAATGGGATGTGACGTAATCATTAGTGCATTGTTTGGGTCT 875
consensus_10858#3      AACGTAAAATT-GTGGTCCCACGGGGATGAGCGGTA-TCACTGGC----TGTT-GGGTNT 215
consensus_10858#2      A-TCTGTATGT-GAGTTGGCATTGAAA-ATATTGTAGCTGTGATACCAACAAACAGATCA 394
consensus_10858#4      AATTTTATATG-GATTATTAATTTATAATTGTAGAACCTGATGAGAAATTATTGAAAAGA 220
consensus_10858#1      AGGGTAAAAGGAGCGGCTGGACATATTTCTTTTGGATGCAAAGCTCTGGCTTTTTGATCC 567
                       *   *       *       *            * *                        

consensus_10858#0      ATTATGAATCATGGCCTTAGACTTTTCAATCACTACCAACTGAGCAGCATAATACGTATT 935
consensus_10858#3      A----AAATATCAGGCCTAGACTT------CATCATCCAATGAGCAGCATAAAGTAT--- 262
consensus_10858#2      ATT-TGTATATCCTAGTTGGTTTT-------ATTAGGGGGCCA-TACCCCGAGCCTTTTA 445
consensus_10858#4      ATATT------------------------------------------------------- 225
consensus_10858#1      GAA--TAGTAATTGCCTCAGGCGTCTGCAGGATTCTCACTCTGACTGAATTAAGTAGACT 625
                                                                                   

consensus_10858#0      CTCAATGGCTGCTTTCAATCTCTGCCTTAAAACTATACTGTTTGATTCGCCTCTATATGG 995
consensus_10858#3      -TCAATGG-TGCTTT--------------------------------------------- 275
consensus_10858#2      CCTAGAGATCTATTCCACACGAGAGTGAAGCAATGT------------------------ 481
consensus_10858#4      ------------------------------------------------------------
consensus_10858#1      GCTGTTAACACGACATATATTTTTGAGAAAAATTGCTCGACGTTGGCTCTATGTCCCATC 685
                                                                                   

consensus_10858#0      TAGATTGATGTAAACCTTTTTCTTTGGCACTTCATACAGTAGACATCTTGGCATTAATTG 1055
consensus_10858#3      ------------------------------------------------------------
consensus_10858#2      ------------------------------------------------------------
consensus_10858#4      ------------------------------------------------------------
consensus_10858#1      TGAATTAAATGGGCTAAAATATTATTATTATCATTAT----------------------- 722
                                                                                   

consensus_10858#0      ACTT 1059
consensus_10858#3      ----
consensus_10858#2      ----
consensus_10858#4      ----
consensus_10858#1      ----