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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10863#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 1788 fasta sequence
[GGTTCTGTGAAGTGTGATCCGGTGAAATCCAAG-GGCTTTGTGTATGTTTTTGTGTGGGAATATGGTGCCACCTATGACCAGTTTATTGAAGGCACATAGGTTTGCAAATCTCCCACCGTTTTCGTTCCTTCCTCCCAGTCCATGTTGTCCCATGACGTCTTCGTATCCAGTGTTGTCCTTTCCAACCTTGGCATTGAAATCTCCCATCAGAATGGTCAGGTCCTTGGTTGGGCACTTCTCGAAGATCGACTGCAGCCTATCGTAGAATTGGTCTTTAGCGTCTTCATCGTAGTCGTTGGTCGGCGCATAGCATTGGATGACGTTCATTGTAATGCCCTCTCTCTTTGTTTTGAAGGAGGCTTTGATGATCCTTGGTCCATGAGAT-TCCCATCCTA-TAAGTGCATTTTGTGCTTTTCTGGACAGCATCAGTGCCACTCCTTGTGTATGTGGGGCATTTTCTTCTTCATGACCGGAGTATAACAGAAGTTCTCCTGAAGACAGTCGTTGTTGTCCAACCTGCGTCCAATGTGTTTCACTGATTCCAAGCACCTCCAGGTTGTATTTTCTCATTTCTGCAGCAATTTGGAAGACTCTTCCGGTCTCCCACATTGTCCGGACATTCCATGTACCTATAAAAATTGTCGCTCTGGTTGTAAGAAGGTGCATCGGCCTCATGACTTCCGAAGGAACTCGGCTTTCATCATGGGACGTCATTTTTCCTTCTACTCCCAGGGCAGAGTTTGAATGGTTTGAATGATTTTTTCTGGTTAGCGTTTTTTTAGCGGGTTGATTTTCTACGGGATGGGGTCGCTAACCCCATGCCCAACCCTCCTCCTTTACCCGGGCTTGGGACCGGCAGTAGCCCCTGGAGGAGCTACAGGCGGAGTTGTTGTTTATAGTCAATGGAATAATAATAATGAAGACAGTGATGGTAACATTAACATAAATAAAACTGGGATGAAAGTTATCAGCGGATAGTGGTTGGCAAACTAACTAACTAATTAACTGTACGTGGTATGAGGATGAGTTTG-TTTTTTCTACTTATTTGACTTGGTTAATTTATATGGTCTGCTTACCTATTTCCTTGTTTCTTATTAATTGTGTACATGAGAGATAGATAAGCATAGCATTGACTTTTGAAACAACTTCTGAATTGACTAGTAGTGAGCAAGAAGTTTTGTGAGAGGTTGAGAGTTGTTTAGTTTTGTTTTCTGGGGTGAATTTCTTACTGGCATTGTAATTATAGTTTTGTAAATCAACTGGTCAGTACTATTATTTTCGATGAAAAAAAGATTTGCTAATTTTAATGATTATGTTCTTGATTTTATAAATATGGNGGGGTAAGCTTGTGGATCCGTTTACTTTAAAATTGGTAGTGTACAGA------AATAATAATAATAATAGCCAAAATGATAATAGCGATAGTAGCAATGATAATGATAAAAGTACCACTGACAGAAATATTATTGATG-ATAATAAGGCGATAGGTGTGTGGTAATTTGTATAATTTTCGAATGTGCAGACAGGTATGTGCATTAGTTTTTTGTTTAGACAGTGTTACGTGTAATGTTGTGTAACTTGTTTGATTT-AGTTAAGTTGAGTAAATGACTGGAATGTGGCTTGTAGCAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTTGCGGATGGACACATTTCTTGGTTAATGAAA-TAACTGTACATGATTANGTANNGTTNGATGGAGNGAAAGATATNATTNGNATTNGATTTNNGATTGNNNATTGGATGATATTTAC]
[+] EMBL CD089036 [GGTTCTGTGAAGTGTGATCCGGTGAAATCCAAGTGGCTTTGTGTATGTTTTTGTGTGGGAATATGGTGCCACCTATGACCAGTTTATT ]
[-] EMBL BE431314 [ GTGAAATCCAAG GGCTTTGTGTATGTTTTTGTGTGGGAATATGGTGCCACCTATGACCAGTTTATTGAAGGCACATAGGTTTGCAAATCTCCCACCGTTTTCGTTCCTTCCTCCCAGTCCATGTTGTCCCATGACGTCTTCGTATCCAGTGTTGTCAATTCCAACCTTGGCATTGAAATCTCCCATTAGAATGGTCAGGTCCTTGGTTGGGCACTTCTCGAAGATTGACTGCAGCCTATCGTAGAATTGGTTTTTAGCGTCTTCATCGTAGTCGTTGGTCGGCGCATAGCATTGGATGATGTTCATTGTAATGCCCTCTCTCTTTGTTTTGAAGGAGGCTTTGATGATCCTCGGTCCATGAGAT TCCCATCCTA TAAGTGCATTTTGTGCTTTTCTAGACAGCATCAGTGCCACTCCTTGTGTATGTGGGGCATTTTCTTCTTCATGATCGGAGTATAACAGAAG ]
[+] EMBL CD117287 [ CATGTTGTCCCATGACGTCTTCGTATCCAGTGTTGTCCTTTCCAACCTTGGCATTGAAATCTCCCATCAGAATGGTCAGGTCCTTGGTTGGGCACTTCTCGAAGATCGACTGCAACCTGTCGTAGAATTGGTCTTTAGCTTCTTCATCGTAGTCGTTGGTCGGCGCATAACATTGGATGACGTTCATTATAATGCCCTATTTCTTTGTTTTGAAGGAGGCTTTGATGATCCTTGGTCCATGAGAT TCCCATCCTA TAAGTGAATTTTGTGCTTGTTTGGATAGCATCAGTGCAACTCCTTGTGTATGTGGGGCATTTTCTTCTTCATGACCGGAGTATAACAGAAGTTCTCCTGAAGACAGTCGTTGTTGTCCAACCTGCGTCCAATGTGTTTCGCTGATCCCAAGCACCTCCAGGTTGTATTTTCTCATTTCTGCAGCAATTTGGAAGACTCTTCCGGTCTCCCACAT ]
[-] EMBL CD180708 [ CCCATGACGTCTTCGTATCCAGTGTTGTCCTTTCCAACCTTGGCATTGAAATCTCCCATTAGAATGGTCAGGTCCTTGGTTGGGCACTTCTCGAAGATTGACTGCAGCCTATCGTAGAATTGGTTTTTAGCGTCTTCATCGTAGTCGTTGGTCGGCGCATAGCATTGGATGATGTTCATTGTAATGCCCTCTCTCTTTGTTTTGAAGGAGGCTTTGATGATCCTCGGTCCATGAGAT TCCCATCCTA TAAGTGCATTTTGTGCTTTTCTAGACAGCATCAGTGCCACTCCTTGTGTATGTGGGGCATTTTCTTCTTCACGACCGGAGTATAACAGAAGTTCCCCTGAAGATAGTCGTTGTTGTCCAACCTGCGTCCAATGTGTTTCACTGATTCCAAGCACTTCCAGGTTGTATTTCCTCATTTCCACAGAAATTTGGAAGACTCTGCCGGTCTCCCACATTGTCCGGACATTCCATGTACCTATAAAA ]
[+] EMBL CD162895 [ TTCCAACCTTGGCATTGAGATCTCCCATCAGAATGGTCAGGTCTTTGGTTGGGCACTTCTCGAAGATCGACTGCAGCCTATCGTAGAATTGGTCTTTAGCGTCTTCATCGTAGTCGTTGGTCGGCGCATAGCATTGGATGACGTTCATTGTAATGCCCTCTCTCTTTGTTTTGAAGGAGGCTTTGATGATCCTTGGTCCATGAGAT TCCCATCCTA TAAGTGCATTTTGTGCTTTTCTGGACAGCATCAATGCAACTCCTTGTGTATGTGGGGCATTTTCTTCTTCATGACCGGAGTATAACAGAAGTTCTCCTGAAGACAGTCGTTGTTGTCCAGCCTGCATCCAATGCGTTTCACTGATTCCAAGCACCTCCAGGTTGTATTTTCTCATTTCTGCAGCAATTTGGAAGACTCTTCCGGTCTCCCACATTGTCCGGACATTCCATGTACCTATAAg ]
[+] EMBL CD162915 [ TTCCAACCTTGGCATTGAGATCTCCCATCAGAATGGTCAGGTCTTTGGTTGGGCACTTCTCGAAGATCGACTGCAGCCTATCGTAGAATTGGTCTTTAGCGTCTTCATCGTAGTCGTTGGTCGGCGCATAGCATTGGATGACGTTCATTGTAATGCCCTCTCTCTTTGTTTTGAAGGAGGCTTTGATGATCCTTGGTCCATGAGAT TCCCATCCTA TAAGTGCATTTTGTGCTTTTCTGGACAGCATCAATGCAACTCCTTGTGTATGTGGGGCATTTTCTTCTTCATGACCGGAGTATAACAGAAGTTCTCCTGAAGACAGTCGTTGTTGTCCAACCTGCGTCCAATGCGTTTCACTGATTCCAAGCACCTCCAGGTTGTATTTTCTCATTTCTGCAGCAATTTGGAAGACTCTTCCGGTCTCCCACATTGTCCGGACATTCCATGTACCTATAAg ]
[-] EMBL CD181140 [ TCCAACCTTAGCATTGAGATCTCCCATCAGAATGGTCAGGTCTTTGGTTGGGCACTTCTTGACGATCGACTGCAACCTGTCGTAGAATTGGTCTTTAGCGTCTTCATCGTAGTCGTTGGTAGGCGCATAGCATTGGATGACGTTCATTGTAATGCCCTCTCTCTTTGTTCTGAAGGAGGCTTTGATGATCCTTGGTCCATGAGAT TCCCATCCTA TAAGTGCATTTTGTGCTTTTCTGGACAGCATCAATGCAACTCCTTGTGTATGTGGGGCATTTTCTTCTTCATGACCGGAGTATAACAGAAGTTCTCCTGAAGACAGTCGTTGTTGTCCAACATGCGTCCAATGTGTTTCGCTGATCCCAAGAACCTCCAGGTTGTATTTTCTCATTTCTGCACCAATTTGGAAGACTATTCCGGTCTCCCACATTGTCCGGACATTCCATGTACCTATAAAA ]
[+] EMBL CD097276 [ TTGGGCACTTCTCGAAGATTGACTGCAGCCTATCGTAGAATTGGTTTTTAGCGTCTTCATCGTAGTCGTTGGTCGGCGCATAGCATTGGATGATGTTCATTGTAATGCCCTCTCTCTTTGTTTTGAAGGAGGCTTTGATGATCCTCGGTCCATGAGAT TCCCATCCTA TAAGTGCATTTTGTGCTTTTCTAGACAGCATCAGTGCCACTCCTTGTGTATGTGGGGCATTTTCTTCTTCATGACCGGAGTATAACAGAAGTTCCCCTGAAGACAGTCTTTGTTGTCCAACCTGTGTCCAATGTGTTTCACTGATTCCAAGCACTTCCAGGTTGTATTTCCTCATCTCCGCAGAAATTTGGAAGACTCTGCCGGTCTCCCACATTGTCCGGACATTCCATGTACCTATAAAAATTGTCGCTCTGGTTGTAAGAAGGTGCATCGGCCTCATGACTTCCGAAGGAACTCGGCTTTCATCATGGGACGTCATTTTTCCTTCTACTCCCAGGGC ]
[-] EMBL CD114440 [ TGGATGACGTTCATTGTAATGCCCACTCTCTTTGTTTTGAAGGAGGCTTTGATGATCATTGGTCCATGAGAT TCCCATCCTA TAAGTGCATTTTGTGATTTTGTGGACAGCATCAATGCAACTCATTGTGTATGTGGGGCATTTTATTATTCATGACCGGAGTATAACAGAAGTTCCCATGAAGACAGTCGTTGTTGTCCAACCTGCGTCCAATGCGTTTCACTGATTCCTAGCACCTCCAGGTTGTATTTTATCAATTATGCAGCAATTTGAAAGACTC ]
[-] EMBL CD171331 [ ATGAGATATCCCTTCCTAGTAAGTGCATTTTGTGCTTTTCTAGACAGCATCAGTGCCACTCCTTGTGTATGTGGGGCATTTTCTTCTTCATGACCGGAGTATAACAGAAGTTCCCCTGAAGACAGTCGTTGT ]
[+] EMBL CD086421 [ AGAT TCCCATCCAA TAAGTGCATTTTGTGCTTTTCTGGACAGCATCAATGCGACTCCTTGTGTATGTGGGGCATTTTCTTCTTCATGACCGGAGTATAACAGAAGTTCTCCTGAAGACAGTCGTTGTTGTTCAACCTGCGTCCAATGTGTTTCACTGATTCCAAGCACC ]
[-] EMBL CD117238 [ AGTGCATTTAGTGCTTTTCTAGACAGCATCAGTGCCACTCCTTGTGTATGTGGGGCATTTTCTTCTTCATGACCGGAGTATAACAGAAGTTCCCCTGAAGACAGTCGTTGTTGTCCAACCTGCGTCCAATGTGTTTCACTGATTCCAAGCACTTCCAGGTTGTATTTCCTCATTTCCGCAGAAATTTGGAAGACTCTTCCGGTCTCCCACATTGTCCGGACATTCCATGTACCTATAAAAATTTTCGCTCTGGTTGTAAGAAGGTGCATCGGCCTCATGACTTCCGAAGGAACTCGGCTTTCATCATGAGACGTCACTTTTCCTTCTACTCCCAGGGCAGAGTTTGAATGGTTTGAATGATTTTTTCTGGTTAGCGTTTTTTTAGCGGGTTGATTTTCTACGGGATGGGGTCGCTAACCCCATGCCCAACCCTCCTCCTTTACCCGGGCTTGGGACCGGCAGTAGCCCCTGGAGGAGCTACAGGCG ]
[+] EMBL CD180904 [ TGAATGGTCTCAATGATTTTTTCTGGTTAGCGTTTTTTTAGCGAGTTGATTTTCTACGGGATGGGGTCGCTAACCCCATGCCCAACCCTCCTCCTTTACCCGGGCGTGGGACCGGCAGTAGCCCCTGGAGGAGCTACAGGCGGAGTTGTTGTTTATAGTCAATGGAATAATAATAATGAAGACAGTGATGGTAACATTAACATAAATAAAACTGGGATGAAAGTTATCAGCGGATAGTGGTTGGCAAACTAACTAACTAATTAACTGTACGTGGTATGAGGATGAGTTTG TTTTTTCTACTTATTTGACTTGGTTAATTTATATGGTCTGCTTACCTATTTCCTTGTTTCTTATTAATTGTGCATATGAGAGATAGATAAGCATAGCATTGACTTTTGAAACAACTTGTGAATTGACTAGTAGTGAGCAAGAAGTTTTGT ]
[+] EMBL CD084911 [ CGGCAGTAGCCCCTGGAGGAGCTACAGGCGGAGTTGTTGTTTATAGTCAATGGAATAATAATAATGAAGACAGTGATGGTAACATTAACATAAATAAAACTGGGATGAAAGTTATCAGCGGATAGTGGTTGGCAAACTAACTAACTAATTAACTGTACGTGTTATGAGGATGAGTTTGTTTTTTTCTACTTATTTGACTTGGTTAATTTATATGGTCTGCTTACCTAATTCCTTGTTCCTTATTAATTGTGTACATGAGAGATAGATAAGCATAGCATTGACTTTTGAAACAACTTCTGAATTGACTAGTAGTGAGCAAGAAGTTTTGTGAGAGGTTGAGAGTTGTTTAGTTTTGTTTTCTGGGGTGAATTTCTTACTGGCATTGTAATTATAGTTTTGTAAATCAACTGGTCAGTACTATTATTTTCGATGAAAAAAAGATTTGCTAATTTTAATGATTATGTTCTTGATTTTATAAATATGGNGGGGTAAGCTTGTGGATCCGTTTACTTTAAAATTGGTAGTGTACAGA AATAATAATAATAATAGCCAAAATGATAATAGCGATAGTAGCAATGATAATGATAAAAGTACCACT ]
[+] EMBL CD088137 [ TGAGGATGAGTTTG TTCTTTCTACTTATTTGACTTGGTTAATTTATATGGTCTGCTTACCTATTTCTTTGTTTCTTATTAATTGTGTACATGAGAGATAGATAAGCATAGCATTGACTTTTGAAACAACTTCTGAATTGACTAGTAGTGAGCAAGAAGTTTTGTGAGAGGTTGAGAGTTGTTTAGTTTTGTTTTTTGGGGTGAATTTCTTACTGGCATTGTAATTATAGTTTTGTAAATCAACTGGTCAGTACTATTATTTTCGATGAAAAAAAGATTTGCTAATTTTAATGATTATGTTCTTGATTTTATAAATATGGTGGGGTAAGCTTGTGGATCCGTTTACTTTAAAATAGGTAGTGTACAGA AATAATAATAATAATAG TAATAATAGCGATAGTAGCAATGATAATGATAAAAGTACCACTGACAGAGATATTATTGATG ATAATAAGGCGATAGGTGTGTGGTAATTTGCATA ]
[-] EMBL CD156512 [ CGTTTACTTTAAAATTGGTAGTGCACAGAAATAATAATAATAATAATAATAGCCAGAATGATAATAGCGATAGTAGCAATGATAATGATAAAAGTACCACTGACAGAAATATTATTGATG ATAATAAGGCGATAGGTGTGTGGTAATTTGTATAATTTTCGAATGTGCAGACAGGTATGTGCATTAGTTTTTTGTTTAGACAGTGTTACGTGTAATGTTGTGTAACTTGTTTGATTT AGTTAAGTTGAGTAAATGACTGGAATGTGGCTTGTAGCAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTTGCGGATGGACACATTTCTTGGTTAATGAAATTAACTGTA ]
[+] EMBL CD092333 [ TAGCCAAAATGATAATAGCGATAGTAGCAATGATAATGATAAAAGTACCACTGACAGAAATATTATTGATGAATAATAAGGCGATAGGTGTGTGGTAATTTGTATAATTTTCGAATGTGCAGACAGGTATGTGCATTAGTTTTTTGTTTAGACAGTGTTACGTGTAATGTTGTGTAACTTGTTTGATTTAAGTTAAGTTGAGTAAATGACTGGAATGTGGCTTGTAGCAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGAAGTAGTAGTTGCGGATGGACACATTTCTTGGNTAATGAAA TAACTGTACATGATTANGTANNGTTNGATGGAGNGAAAGATATNATTNGNATTNGATTTNNGATTGNNNATTGGATGATATTTAC]
consensusID : consensus_10863#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 882 fasta sequence
[GAGCCATATTCGGCACGACGGAGGCTGTTATTGGTGTTTTGGACTTAACTGGTTGGGCTAGGCAGATCGCAGGACCGGTTAGCACTGTAGACTGCTCGTACGGTTTCATGTGTCACTGTTCCAATCGACAATTCGCTGCTCCCTGTTTGGCGGTCTTATCGCGTCACACATCAACTAGGCATCCACTCGGCTACAAGCATAACAGGAAGACGCAAACAAACATTATAAAAATAAATGATCATCATATTAATTGACCAAGAAGGAATATTCAGGTAAGACCTAAAGAAGAAAAGCCAAATATGGTCCACTGTCACTAGCAACTAAAATCTAGCCGATGTAAAATCAGCTATGGCTTCCGAACATCAATCATATATACCTGAATGTATTCATTGCTTTAATTATTCAACTTTACGTAAAGAATTTGAATAGACGGAGATCGTCTTGCTTTTTAATTTGAAAGGTACTCATCCAACTGTGCAAGTCAGTAACCGAATCGTCTTATAGAAGCACACATACATTTGAGTTTGTTTACATCAAATTTGGCTAAGCCCTTTTGTTAACTTATTTAACGGACAGTCATTCATACAACGACAACCTATCTATACTATTGTACTTTTATTATGTACGCTTGTACATTGCTTACTGCCTAAGCATGTATTTATTCTGCTAGCCTTACTATTAATCGCTTGATCCGATGATTCATGCCATTCCACTTGTATATATATGTACATCTTAATCCTGTTCACTGCTCTACACTGCACTGTACTGTACTCGCTCATTCGGCTCTCACGCTCACTCGCCTGTTTTATGACACCACTTTTTCATGCTTGCTTTACGTGCCTGTGATTTGGATATCTGTGTGTGGCCCAATATAAACGAAAT]
[+] EMBL CD081717 [GAGCCATATTCGGCACGACGGAGGCTGTTATTGGTGTTTTGGACTTAACTGGTTGGGCTAGGCAGATCGCAGGACCGGTTAGCACTGTAGACTGCTCGTACGGTTTCATGTGTCACTGTTCCAATCGACAATTCGCTGCTCCCTGTTTGGCGGTCTTATCGCGTCACACATCAACTAGGCATCCACTCGGCTACAAGCATAACAGGAAGACGCAAACAAACATTATAAAAATAAATGATCATCATATTAATTGACCAAGAAGGAATATTCAGGTAAGACCTAAAGAAGAAAAGCCAAATATGGTCCACTGTCACTAGCAACTAAAATCTAGCCGATGTAAAATCAGCTATGGCTTCCGAACATCAATCATATATACCTGAATGTATTCATTGCTTTAATTATTCAACTTTACGTAAAGAATTTGAATAGACGGAGATCGTCTTGCTTTTTAATTTGAAAGGTACTCATCCAACTGTGCAAGTCAGTAACCGAATCGTCTTATAGAAGCACACATACATTTGAGTTTGTTTACATCAAATTTGGCTAAGCCCTTTTGTTAACTTATTTAACGGACAGTCATTCATACAACGACAACCTATCTATACTATTGTACTTTTATTATGTACGCTTGTACATTGCTTACTGCCTAAGCATGTATTTATTCTGCTAGCCTTACTATTAATCGCTTGATCCGATGATTCATGCCATTCCACTTGTATATATATGTACATCTTAATCCTGTTCACTGCTCTACACTGCACTGTACTGTACTCGCTCATTCGGCTCTCACGCTCACTCGCCTGTTTTATGACACCACTTTTTCATGCTTGCTTTACGTGCCTGTGATTTGGATATCTGTGTGTGGCCCAATATAAACGAAAT]
consensusID : consensus_10863#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 443 fasta sequence
[ACTAGGTAAGGATGGCAAATCAATTGATGAAGTAGTGAAACTTCTCCAGTTGAGATGGCTGGGACACGTGTTACGTATGCCCAACCAGTCACTGACAAGTGGACTGAGCCATTTTTGGTTATCTAATCGGTCTGAGAGGATAATCACAAACAATGAACAAGTTTTGAGAATTGGCAACACAGCTTTTTCAGAAGTGTTTGTCTGCAATCTTTGTGGTTAGTCTAGTTATTTGGGGATCAGAACTCCTTCTGGGGAATAAGAAGTTTGCTGGTTTAAAAGCTTATTTTTCCTCTTCTTCTCTTCATAGCTTTAAGAAAGATGTATTAATGTAGATGTCGGCCATCAAAGGTAATAAAATCCTTGCCTTGGCACCCCATTACAAACAGTAATTTATTTATATCTTTGAACATGGAGTGAGTTGGTTTTAATTTCACTAGTTTCCA]
[+] EMBL CD084822 [ACTAGGTAAGGATGGCAAATCAATTGATGAAGTAGTGAAACTTCTCCAGTTGAGATGGCTGGGACACGTGTTACGTATGCCCAACCAGTCACTGACAAGTGGACTGAGCCATTTTTGGTTATCTAATCGGTCTGAGAGGATAATCACAAACAATGAACAAGTTTTGAGAATTGGCAACACAGCTTTTTCAGAAGTGTTTGTCTGCAATCTTTGTGGTTAGTCTAGTTATTTGGGGATCAGAACTCCTTCTGGGGAATAAGAAGTTTGCTGGTTTAAAAGCTTATTTTTCCTCTTCTTCTCTTCATAGCTTTAAGAAAGATGTATTAATGTAGATGTCGGCCATCAAAGGTAATAAAATCCTTGCCTTGGCACCCCATTACAAACAGTAATTTATTTATATCTTTGAACATGGAGTGAGTTGGTTTTAATTTCACTAGTTTCCA]
[+] EMBL CD084854 [ACTAGGTAAGGATGGCAAATCAATTGATGAAGTAGTGAAACTTCTCCAGTTGAGATGGCTGGGACACGTGTTACGTATGCCCAACCAGTCACTGACAAGTGGACTGAGCCATTTTTGGTTATCTAATCGGTCTGAGAGGATAATCACAAACAATGAACAAGTTCTGAGAATTGGCAACACAGCTTTTTCAGAAGTGTTTGTCTGCAATCTTTGTGGTTAGTCTAGTTATTTGGGGATCAGAACTCCTTCTGGGGAATAAGAAGTTTGCTGGTTTAAAAGCTTATTTTTCCTCTTCTTCTCTTCATAGCTTTAAGAAAGATGTATTAATGTAGATGTCGGCCATCAAAGGTAATAAAATCCTTGCCTTGGCACCCCATTACAAACAGTAATTTATTTATATCTTTGAACATGGAGTGAGTTGGTTTTAATTTCACTAGTTTCCA]
consensusID : consensus_10863#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 391 fasta sequence
[GCCAAAATGATAATAGCGATAGTAGCAATGATAATGATAAAAGTACCACTGACAGAAATATTACTGATGATAATAAGGCGATAGGTGTGTGGTAATTTGTATAATTTTCGAATGTGCAGACAGGTATGTGCATTAGTTTTTTGTTTAGACAGTGTTACGTGTAATGTTGCGTAACTTGTTTGATTTAGTTAAGTTGAGTAAATGACTGGAATGTGGCTTGTAGCAGTAGTAGTAGTAGAAGTAGTAGTAGTAGTAGTAGAAGTAGTAGTTGCGGATGGACACATTTCTTGGTTAAATGAATTCACTGTACATGATTAGGTAGGTTTGATATGAGTGAAGTATATATTTGTATTTGAATTTGCATTTGCACTTGGATGCATATTTATATATC]
[+] EMBL CD120339 [GCCAAAATGATAATAGCGATAGTAGCAATGATAATGATAAAAGTACCACTGACAGAAATATTACTGATGATAATAAGGCGATAGGTGTGTGGTAATTTGTATAATTTTCGAATGTGCAGACAGGTATGTGCATTAGTTTTTTGTTTAGACAGTGTTACGTGTAATGTTGCGTAACTTGTTTGATTTAGTTAAGTTGAGTAAATGACTGGAATGTGGCTTGTAGCAGTAGTAGTAGTAGAAGTAGTAGTAGTAGTAGTAGAAGTAGTAGTTGCGGATGGACACATTTCTTGGTTAAATGAATTCACTGTACATGATTAGGTAGGTTTGATATGAGTGAAGTATATATTTGTATTTGAATTTGCATTTGCACTTGGATGCATATTTATATATC]
consensusID : consensus_10863#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 216 fasta sequence
[GTCTTTAACGTCTTCATTGTGGTCGTTGATAGGCGCATAGCATTGGATGACGTTCATTGTAATGCCCTCTCTCTTTGTTTTGAAGGAGCCTTTGATGATCCTTGGTCCATGAGATTCCCATCCTATAAGTGCATTTTGTGTTTGTTTAGACAGCATCAATGCACCTCCTTGTGTATGTGTAGCATTTTCTTCTTCATGGTTGGAGTATAACAGAAG]
[+] EMBL CD133610 [GTCTTTAACGTCTTCATTGTGGTCGTTGATAGGCGCATAGCATTGGATGACGTTCATTGTAATGCCCTCTCTCTTTGTTTTGAAGGAGCCTTTGATGATCCTTGGTCCATGAGATTCCCATCCTATAAGTGCATTTTGTGTTTGTTTAGACAGCATCAATGCACCTCCTTGTGTATGTGTAGCATTTTCTTCTTCATGGTTGGAGTATAACAGAAG]
consensusID : consensus_10863#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 89 fasta sequence
[AGCCCGGGTAAAGGAGGAGGATTGGGCATGGGGTTAGCGATCCCATCCTGTAGAAAAACTAACTCGCTAAAAGAAACGCTACCAGAAAA]
[+] EMBL CD071685 [AGCCCGGGTAAAGGAGGAGGATTGGGCATGGGGTTAGCGATCCCATCCTGTAGAAAAACTAACTCGCTAAAAGAAACGCTACCAGAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10863#0 GGTTCTGTGAAGTGTGATCCGGTGAAATCCAAGGGCTTTGTGTATGTTTTTGTGTGGGAA 60
consensus_10863#4 ------------------------------------------------------------
consensus_10863#3 ------------------------------------------------------------
consensus_10863#5 ------------------------------------------------------------
consensus_10863#1 ------------------------------------------------------------
consensus_10863#2 ------------------------------------------------------------
consensus_10863#0 TATGGTGCCACCTATGACCAGTTTATTGAAGGCACATAGGTTTGCAAATCTCCCACCGTT 120
consensus_10863#4 ------------------------------------------------------------
consensus_10863#3 ------------------------------------------------------------
consensus_10863#5 ------------------------------------------------------------
consensus_10863#1 ------------------------------------------------------------
consensus_10863#2 ------------------------------------------------------------
consensus_10863#0 TTCGTTCCTTCCTCCCAGTCCATGTTGTCCCATGACGTCTTCGTATCCAGTGTTGTCCTT 180
consensus_10863#4 ------------------------------------------------------------
consensus_10863#3 ------------------------------------------------------------
consensus_10863#5 ------------------------------------------------------------
consensus_10863#1 ------------------------------------------------------------
consensus_10863#2 ------------------------------------------------------------
consensus_10863#0 TCCAACCTTGGCATTGAAATCTCCCATCAGAATGGTCAGGTCCTTGGTTGGGCACTTCTC 240
consensus_10863#4 ------------------------------------------------------------
consensus_10863#3 ------------------------------------------------------------
consensus_10863#5 ------------------------------------------------------------
consensus_10863#1 ------------------------------------------------------------
consensus_10863#2 ------------------------------------------------------------
consensus_10863#0 GAAGATCGACTGCAGCCTATCGTAGAATTGGTCTTTAGCGTCTTCATCGTAGTCGTTGGT 300
consensus_10863#4 ------------------------------GTCTTTAACGTCTTCATTGTGGTCGTTGAT 30
consensus_10863#3 ---------------------------------GCCAAAATGATAATAGCGATAGTAGCA 27
consensus_10863#5 ------------------------------------------------------------
consensus_10863#1 ----------------------------------GAGCCATATTCGGCACGACGGAGGCT 26
consensus_10863#2 ----------------------------ACTAGGTAAGGATGGCAAATCAATTGATGAAG 32
consensus_10863#0 CGGCGCATAGCATTGGATGACGTTCATTGTAATGCCCTCTCTCTTTGTTTTG-AAG-GAG 358
consensus_10863#4 AGGCGCATAGCATTGGATGACGTTCATTGTAATGCCCTCTCTCTTTGTTTTG-AAG-GAG 88
consensus_10863#3 ATGATAATGATAA-AAGTACCACTGACAGAAATATTACTGATGATAATAAGGCGAT-AGG 85
consensus_10863#5 ---------------------------------------------AGCCCGGGTAA-AGG 14
consensus_10863#1 GTTATTGGTGTTTTGGACTTAACTGGTTGGGCTAGGCAGATCGCAGGACCGGTTAG-CAC 85
consensus_10863#2 TAGTGAAACTTCTCCAGTTGAGATGGCTGGGACACGTGTTACGTATGCCCAACCAGTCAC 92
*
consensus_10863#0 GCTTTGATGATCCTTG--GTCCATGAGATTCCCATCCTATAAGTGCATTTTGT--GCTTT 414
consensus_10863#4 CCTTTGATGATCCTTG--GTCCATGAGATTCCCATCCTATAAGTGCATTTTGT--GTTTG 144
consensus_10863#3 TGTGTGGTAATTTGTATAATTTTCGAATGTGCAGACAGGTATGTGCATTAGTT--TTTTG 143
consensus_10863#5 AGGAGGATTGGGCATGGGGTTAGCGA---TCCCATCCTGTAGAAAAACTAACT--CGCTA 69
consensus_10863#1 TGTA-GACTGCTCGTACGGTTTCATGTGTCACTGTTCCAATCGACAATTCGCTGCTCCCT 144
consensus_10863#2 TGACAAGTGGACTGAGCCATTTTTGGTTATCTAATCGGTCTGAGAGGATAATCACAAACA 152
* *
consensus_10863#0 TCTGGACAGCATC---AGTGCCACTCCTTGTGTA-TGTGGGGCATTTTCTTC-------T 463
consensus_10863#4 TTTAGACAGCATC---AATGCACCTCCTTGTGTA-TGTGTAGCATTTTCTTC-------T 193
consensus_10863#3 TTTAGACAGTGTT---A-CGTGTAATGTTGCGTAACTTGTTTGATTTAGTTAAGTTGAGT 199
consensus_10863#5 --AAAGAAACGCT---ACCAGAAAA----------------------------------- 89
consensus_10863#1 GTTTGGCGGTCTT---ATCGCGTCACACATCAACTAGGCATCCACTCGGCTA-----CAA 196
consensus_10863#2 ATGAACAAGTTTTGAGAATTGGCAACACAGCTTTTTCAGAAGTGTTTGTCTGCA--ATCT 210
*
consensus_10863#0 TCATGACCGGAGTATAAC----AGAAGTTCTCCTGAAGACAGTCGTTGTTGTCCAACCTG 519
consensus_10863#4 TCATGGTTGGAGTATAAC----AGAAG--------------------------------- 216
consensus_10863#3 AAATGACTGGAATGTGGCTTGTAGCAGTAGTAGTAGTAGAAGTAGTAGTAGTAGTAGTAG 259
consensus_10863#5 ------------------------------------------------------------
consensus_10863#1 GCATAACAGGAAGACGCAAACAAACATTATAAAAATAAATGATCATCATATTAATTGACC 256
consensus_10863#2 TTGTGGTTAGTCTAGTTATTTGGGGATCAGAACTCCTTCTGGGGAATAAGAAGTTTGCTG 270
consensus_10863#0 CGTCCAATG-TGTTTCACTGATTCCAAGCACCTCCAGGTTGTATTTTCTCATTTCTGCAG 578
consensus_10863#4 ------------------------------------------------------------
consensus_10863#3 AAGTAGTAG-TTGCGGATGGACACATTTCTTGGTTAAATGAATTCACTGTACATGATTAG 318
consensus_10863#5 ------------------------------------------------------------
consensus_10863#1 AAGAAGGAA-TATTCAGGTAAGACCTAAAGAAGAAAAGCCAAAT-ATGGTCCACTGTCAC 314
consensus_10863#2 GTTTAAAAGCTTATTTTTCCTCTTCTTCTCTTCATAGCTTTAAGAAAGATGTATTAATGT 330
consensus_10863#0 CAATTTGGAAGACTCTTCCGGTCTCCCACATTGTCCGGACATTCCATGTACCTATAAAAA 638
consensus_10863#4 ------------------------------------------------------------
consensus_10863#3 GTAGGTTTGATATGAGTGAAGTATATATTTGTATTTGAATTTGCATTTGCACTTGGATGC 378
consensus_10863#5 ------------------------------------------------------------
consensus_10863#1 TAGCAACTAAAATCTAGCCGATGTAAAATCAGCTATGGCTTCCGAACATCAATCATATAT 374
consensus_10863#2 AGATGTCGGCCATCAAAGGTAATAAAATCCTTGCCTTGGCACCCCATTACAAACAGTAAT 390
consensus_10863#0 TTGTCGCTCTGGTTGTAAGAAGGTGCATCGGCCTCATGACTTCCGAAGGAACTCGGCTTT 698
consensus_10863#4 ------------------------------------------------------------
consensus_10863#3 ATATTTATATATC----------------------------------------------- 391
consensus_10863#5 ------------------------------------------------------------
consensus_10863#1 ACCTGAATGTATTCATTGCTTTAATTATTCAACTTTACGTAAAGAATTTGAATAGACGGA 434
consensus_10863#2 TTATTTATATCTTTGAACATGGAGTGAGTTGGTTTTAATTTCACTAGTTTCCA------- 443
consensus_10863#0 CATCATGGGACGTCATTTTTCCTTCTACTCCCAGGGCAGAGTTTGAATGGTTTGAATGAT 758
consensus_10863#4 ------------------------------------------------------------
consensus_10863#3 ------------------------------------------------------------
consensus_10863#5 ------------------------------------------------------------
consensus_10863#1 GATCGTCTTGCTTTTTAATTTGAAAGGTACTCATCCAACTGTGCAAGTCAGTAACCGAAT 494
consensus_10863#2 ------------------------------------------------------------
consensus_10863#0 TTTTTCTGGTTAGCGTTTTTTTAGCGGGTTGATTTTCTACGGGATGGGGTCGCTAACCCC 818
consensus_10863#4 ------------------------------------------------------------
consensus_10863#3 ------------------------------------------------------------
consensus_10863#5 ------------------------------------------------------------
consensus_10863#1 CGTCTTATAGAAGCACACATACATTTGAGTTTGTTTACATCAAATTTGGCTAA-GCCCTT 553
consensus_10863#2 ------------------------------------------------------------
consensus_10863#0 ATGCCCAACCCTCCTCCTTTACCCGGGCTTGGGACCGGCAGTAGCCCCTGGAGGAGCTAC 878
consensus_10863#4 ------------------------------------------------------------
consensus_10863#3 ------------------------------------------------------------
consensus_10863#5 ------------------------------------------------------------
consensus_10863#1 TTGTTAACTTATTTAACGGACAGTCATTCATACAACGACAACCTATCTATACTATTGTAC 613
consensus_10863#2 ------------------------------------------------------------
consensus_10863#0 AGGCGGAGTTGTTGTTTATAGTCAATGGAATAATAATAATGAAGACAGTGATGGTAACAT 938
consensus_10863#4 ------------------------------------------------------------
consensus_10863#3 ------------------------------------------------------------
consensus_10863#5 ------------------------------------------------------------
consensus_10863#1 TTTTATTATGTACGCTTGTACATTGCTTACTGCCTAAGCATGTATTTATTCTGCTAGCCT 673
consensus_10863#2 ------------------------------------------------------------
consensus_10863#0 TAACATAAATAAAACTGGGATGAAAGTTATCAGCGGATAGTGGTTGGCAAACTAACTAAC 998
consensus_10863#4 ------------------------------------------------------------
consensus_10863#3 ------------------------------------------------------------
consensus_10863#5 ------------------------------------------------------------
consensus_10863#1 TACTATTAATCGCTTGATCCGATGATTCATGCCATTCCACTTGTATATATATGTACATCT 733
consensus_10863#2 ------------------------------------------------------------
consensus_10863#0 TAATTAACTGTACGTGGTATGAGGATGAGTTTGTTTTTTCTACTTATTTGACTTGGTTAA 1058
consensus_10863#4 ------------------------------------------------------------
consensus_10863#3 ------------------------------------------------------------
consensus_10863#5 ------------------------------------------------------------
consensus_10863#1 TAATCCTGTTCAC-TGCTCTACACTGCACTGTACTGTACTCGCTCATTCGGCTCTCACGC 792
consensus_10863#2 ------------------------------------------------------------
consensus_10863#0 TTTATATGGTCTGCTTACCTATTTCCTTGTTTCTTATTAATTGTGTACATGAGAGATAGA 1118
consensus_10863#4 ------------------------------------------------------------
consensus_10863#3 ------------------------------------------------------------
consensus_10863#5 ------------------------------------------------------------
consensus_10863#1 TCACTCGCCTGTTTTATGACACCACTTTTTCATGCTTGCTTTACGTGCCTGTGATTTGGA 852
consensus_10863#2 ------------------------------------------------------------
consensus_10863#0 TAAGCATAGCATTGACTTTTGAAACAACTTCTGAATTGACTAGTAGTGAGCAAGAAGTTT 1178
consensus_10863#4 ------------------------------------------------------------
consensus_10863#3 ------------------------------------------------------------
consensus_10863#5 ------------------------------------------------------------
consensus_10863#1 TATCTGTGTGTGGCCCAATATAAACGAAAT------------------------------ 882
consensus_10863#2 ------------------------------------------------------------
consensus_10863#0 TGTGAGAGGTTGAGAGTTGTTTAGTTTTGTTTTCTGGGGTGAATTTCTTACTGGCATTGT 1238
consensus_10863#4 ------------------------------------------------------------
consensus_10863#3 ------------------------------------------------------------
consensus_10863#5 ------------------------------------------------------------
consensus_10863#1 ------------------------------------------------------------
consensus_10863#2 ------------------------------------------------------------
consensus_10863#0 AATTATAGTTTTGTAAATCAACTGGTCAGTACTATTATTTTCGATGAAAAAAAGATTTGC 1298
consensus_10863#4 ------------------------------------------------------------
consensus_10863#3 ------------------------------------------------------------
consensus_10863#5 ------------------------------------------------------------
consensus_10863#1 ------------------------------------------------------------
consensus_10863#2 ------------------------------------------------------------
consensus_10863#0 TAATTTTAATGATTATGTTCTTGATTTTATAAATATGGNGGGGTAAGCTTGTGGATCCGT 1358
consensus_10863#4 ------------------------------------------------------------
consensus_10863#3 ------------------------------------------------------------
consensus_10863#5 ------------------------------------------------------------
consensus_10863#1 ------------------------------------------------------------
consensus_10863#2 ------------------------------------------------------------
consensus_10863#0 TTACTTTAAAATTGGTAGTGTACAGAAATAATAATAATAATAGCCAAAATGATAATAGCG 1418
consensus_10863#4 ------------------------------------------------------------
consensus_10863#3 ------------------------------------------------------------
consensus_10863#5 ------------------------------------------------------------
consensus_10863#1 ------------------------------------------------------------
consensus_10863#2 ------------------------------------------------------------
consensus_10863#0 ATAGTAGCAATGATAATGATAAAAGTACCACTGACAGAAATATTATTGATGATAATAAGG 1478
consensus_10863#4 ------------------------------------------------------------
consensus_10863#3 ------------------------------------------------------------
consensus_10863#5 ------------------------------------------------------------
consensus_10863#1 ------------------------------------------------------------
consensus_10863#2 ------------------------------------------------------------
consensus_10863#0 CGATAGGTGTGTGGTAATTTGTATAATTTTCGAATGTGCAGACAGGTATGTGCATTAGTT 1538
consensus_10863#4 ------------------------------------------------------------
consensus_10863#3 ------------------------------------------------------------
consensus_10863#5 ------------------------------------------------------------
consensus_10863#1 ------------------------------------------------------------
consensus_10863#2 ------------------------------------------------------------
consensus_10863#0 TTTTGTTTAGACAGTGTTACGTGTAATGTTGTGTAACTTGTTTGATTTAGTTAAGTTGAG 1598
consensus_10863#4 ------------------------------------------------------------
consensus_10863#3 ------------------------------------------------------------
consensus_10863#5 ------------------------------------------------------------
consensus_10863#1 ------------------------------------------------------------
consensus_10863#2 ------------------------------------------------------------
consensus_10863#0 TAAATGACTGGAATGTGGCTTGTAGCAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTA 1658
consensus_10863#4 ------------------------------------------------------------
consensus_10863#3 ------------------------------------------------------------
consensus_10863#5 ------------------------------------------------------------
consensus_10863#1 ------------------------------------------------------------
consensus_10863#2 ------------------------------------------------------------
consensus_10863#0 GTAGTAGTAGTAGTTGCGGATGGACACATTTCTTGGTTAATGAAATAACTGTACATGATT 1718
consensus_10863#4 ------------------------------------------------------------
consensus_10863#3 ------------------------------------------------------------
consensus_10863#5 ------------------------------------------------------------
consensus_10863#1 ------------------------------------------------------------
consensus_10863#2 ------------------------------------------------------------
consensus_10863#0 ANGTANNGTTNGATGGAGNGAAAGATATNATTNGNATTNGATTTNNGATTGNNNATTGGA 1778
consensus_10863#4 ------------------------------------------------------------
consensus_10863#3 ------------------------------------------------------------
consensus_10863#5 ------------------------------------------------------------
consensus_10863#1 ------------------------------------------------------------
consensus_10863#2 ------------------------------------------------------------
consensus_10863#0 TGATATTTAC 1788
consensus_10863#4 ----------
consensus_10863#3 ----------
consensus_10863#5 ----------
consensus_10863#1 ----------
consensus_10863#2 ----------
|
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||