cluster # 10865

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Schistosoma mansoni
cluster # 10865 cluster # 10865 Sequences # 23 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10865#0 length = 990 sequences # 4

consensus_10865#1 length = 685 sequences # 18
consensus_10865#2 length = 623 sequences # 1

consensusID : consensus_10865#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 990
fasta sequence

                              [ACCAGCCANAATTTGGCACGAGGAGCTTCCGTGACGGTAAATACAGGACGCTGCTGACAACTAACGTGGCTGCTCGTGGTCTAGATGTTCCAAACGTAGATTTAGTTATACAGTGCCATCCTCCACGGGATATTGAAGACTATATTCACCGTTCAGGTCGAACTGGTCGAGCCGATCGAAGTGGTACTTCCATCTGTTTTTATACTTACAAGGAACGTAGTATGCTTTCCAGGATTGAAAACATGGCGGGTATAACATTTCGCCGCATATCTGCACCTACTATTAACGACATAACTACTGCTTGGGGTGAAGAAATTTTAAAAACATTCTCCAATGTGCCCAAATCTACTTGGTCCACGTTTGTACCTTTGGCCTTATCCATTGCAAACCAGCTTGCACAAAACTCAAAAACTGGGAAAGTGAAAAAAGATTCTTGTGACGACTTAGGGGTTGATGATGATAAGACACCTGGTCGTAAGCCTAAATCTAAAGACATACTTCGTGTTCTTTGTTGTGCATTAGCTTGCCTAAGTGGCAAAGAAGGTGCAGTTGAAAGTCGCTCAGCGCTCACGGCACAGATAGGTAAAACAGCCTATAAGCTTGAGTTGAATTTTATTGCACGAAGCAAGGGACTAGCCTTCGCTACATTACGAAACCACTTACCGGAAAACATTGTGAACAGTGTTCATAGTCTAAGTTTCATTCGTGGGAAAATGGGATACGTGTTCGATCTGCCTTCAGAGCATGATGAATTTGTAAAGTCGACATGGCCAAATGATGCACAAGCTAAACTATCACTACTTTCTAAAATCCCAGAATTAGAAGAGGAAGAATTTTTCAATCAAGGTCGTTCAGGAAATTATGGATCTTGGCAGAGTCGATTTAACGGCGGTTCGAGACAGTCATTTAAACGTTCTTATAATAGTGGTACTTTCAATAGTTCATTCAGAAGTTCAAAGTCCTTTAAATTTGATAACAGTTGAATAAACA]

[+] EMBL CD079611             [ACCAGCCANAATTTGGCACGAGGAGCTTCCGTGACGGTAAATACAGGACGCTGCTGACAACTAACGTGGCTGCTCGTGGTCTAGATGTTCCAAACGTAGATTTAGTTATACAGTGCCATCCTCCACGGGATATTGAAGACTATATTCACCGTTCAGGTCGAACTGGTCGAGCCGATCGAAGTGGTACTTCCATCTGTTTTTATACTTACAAGGAACGTAGTATGCTTTCCAGGATTGAAAACATGGCGGGTATAACATTTCGCCGCATATCTGCACCTACTATTAACGACATAACTACTGCTTGGGGTGAAGAAATTTTAAAAACATTCTCCAATGTGCCCAAATCTACTTGGTCCACGTTTGTACCTTTGGCCTTATCCATTGCAAACCAGCTTGCACAAAACTCAAAAACTGGGAAAGTGAAAAAAGATTCTTGTGACGACTTAGGGGTTGATGATGATAAGACACCTGGTCGTAAGCCTAAATCTAAAGACATACTTCGTGTTCTTTGTTGTGCATTAGCTTGCCTAAGTGGCAAAGAAGGTGCAGTTGAAAGTCGCTCAGCGCTCACGGCACAGATAGGTAAAACAGCCTATAAGCTTGAGTTGAATTTTATTGCACGAAGCAAGGGACTAGCCTTCGCTACATTACGAAACCACTTACCGGANAACATTGTGAACAGTGTTCATAGTCTAAGTTTC                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD190868             [                                                                                                                                                                                                                                                                                                                                                         CTACTTGGTCCACGTTTGTACCTTTGGCCTTATCCATTGCAAACCAGCTTGCACAAAACTCAAAAACTGGGAAAGTGAAAAAAGATTCTTGTGACGACTTAGGGGTTGATGATGATAAGACACCTGGTCGTAAGCCTAAATCTAAAGACATACTTCGTGTTCTTTGTTGTGCATTAGCTTGCCTAAGTGGCAAAGAAGGTGCAGTTGAAAGTCGCT                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD073873             [                                                                                                                                                                                                                                                                                                                                                                 TCCACGTTTGTACCTTTGGCCTTATCCATTGCAAACCAGCTTGCACAAAACTCAAAAACTGGGAAAGTGAAAAAAGATTCTTGTGACGACTTAGGGGTTGATGATGATAAGACACCTGGTCGTAAGCCTAAATCTAAAGACATACTTCGTGTTCTTTGTTGTGCATTAGCTTGCCTAAGTGGCAAAGAAGGTGCAGTTGAAAGTCGCTCAGCGCTCACGGCACAGATAGGTAAAACAGCCTATAAGCTTGAGTTGAATTTTATTGCACGAAGCAAGGGACTAGCCTTCGCTACATTACGAAACCACTTACCGGAAAACATTGTGAACAGTGTTCATAGTCTAAGTTTCATTCGTGGGAAAATGGGATACGTGTTCGATCTGCCTTCAGAGCATGATGAATTTGTAAAGTCGACATGGCCAAATGATGCACAAGCTAAACTATCACTACTTTCTAAAATCCCAGAATTAGAAGAGGAAGAATTTTTCAATCAAGGTCGTTCAGGAAATTATGGATCTTGGCAGAGTCGATTTAACGGCGGTTCGAGACAGTCATTTAAACGTTCTTATAATAGTGGTACTTTCAATAGTTCATTCAGAAGTTCAAAGTCCTTTAAATTTGATAACAGTTGAATAAACA]
[-] EMBL CD076125             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GGCACAGATAGGTAAAACAGCCTATAAGCTTGAGTTGAATTTTATTGCCCGAAGCAAGGGACTAGCCTTCGCTACATTACGAAACCCCTTACCGGAAAACATTGTGAACAGTGTTCATAGTTTAAGTTTCATTCGTGGGAAAATGGGAAACGTGTTCGATTTGCCTTCAGAGCATGATGAATTTGTAAAGTCGACATGGCCCAATGATGCCCCAGCTAAACTATCCCTACTTTTTAAAATCCCCGAATTAGAAAAGGAAGAATTTTTCAATCAAGGTCGTTCAGGAAATTATGGATTTTGGCAAAGTCGATTTAACGGCGGTTCGAGACAGTCATTTAAACGTTTTTATAAAAGTGGGACTTTCAATAGTTCATTCAGAAGTTCAAAGTCCTTTAAATTTGATAACAGTTGAATAAACA]




>consensus_10865#0
ACCAGCCANAATTTGGCACGAGGAGCTTCCGTGACGGTAAATACAGGACGCTGCTGACAA
CTAACGTGGCTGCTCGTGGTCTAGATGTTCCAAACGTAGATTTAGTTATACAGTGCCATC
CTCCACGGGATATTGAAGACTATATTCACCGTTCAGGTCGAACTGGTCGAGCCGATCGAA
GTGGTACTTCCATCTGTTTTTATACTTACAAGGAACGTAGTATGCTTTCCAGGATTGAAA
ACATGGCGGGTATAACATTTCGCCGCATATCTGCACCTACTATTAACGACATAACTACTG
CTTGGGGTGAAGAAATTTTAAAAACATTCTCCAATGTGCCCAAATCTACTTGGTCCACGT
TTGTACCTTTGGCCTTATCCATTGCAAACCAGCTTGCACAAAACTCAAAAACTGGGAAAG
TGAAAAAAGATTCTTGTGACGACTTAGGGGTTGATGATGATAAGACACCTGGTCGTAAGC
CTAAATCTAAAGACATACTTCGTGTTCTTTGTTGTGCATTAGCTTGCCTAAGTGGCAAAG
AAGGTGCAGTTGAAAGTCGCTCAGCGCTCACGGCACAGATAGGTAAAACAGCCTATAAGC
TTGAGTTGAATTTTATTGCACGAAGCAAGGGACTAGCCTTCGCTACATTACGAAACCACT
TACCGGAAAACATTGTGAACAGTGTTCATAGTCTAAGTTTCATTCGTGGGAAAATGGGAT
ACGTGTTCGATCTGCCTTCAGAGCATGATGAATTTGTAAAGTCGACATGGCCAAATGATG
CACAAGCTAAACTATCACTACTTTCTAAAATCCCAGAATTAGAAGAGGAAGAATTTTTCA
ATCAAGGTCGTTCAGGAAATTATGGATCTTGGCAGAGTCGATTTAACGGCGGTTCGAGAC
AGTCATTTAAACGTTCTTATAATAGTGGTACTTTCAATAGTTCATTCAGAAGTTCAAAGT
CCTTTAAATTTGATAACAGTTGAATAAACA

consensusID : consensus_10865#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 18
consensus length = 685
fasta sequence

                              [CATGTTGTCCTAG-ATGAGGTGGATCGTATGCTGGATATGGGTTTCAGTAAAGATGTGGAAAGTATTTTGTCAAAAATATATAACAGCGAAAATTCTGAAAAACCTCAGACTCTTCTTTTCTCCGCTACAATGCCTTCATGGGTTTCAGAGATATCAAGATGTTATCTTTCAGATGATGCCTTACACTTATCTTTAATAGATGAACAAGAAACGAAAACTTCCACCAATGTTACACATTTAGCTCTTTTGTGCCCTTATGAATCACGTGCAGCTACGTTATCAGATGTCATAAAAGTTTATTGCAAGGGTCGAGGAG-GAAGATGCATTGTGTTTTGTGAACGCAAAAAGGACGCAGACGAGTTATCTGCAAGTGATGCTATGTCAGGTGATTGTCATGTTCTTCATGGAAGTGTTCCACAAGACAAACGAGAGTTAGTTCTTCAAAGATTCCGTGACGGTAAATACAGGACGCTGCTGACAACTAACGTGGCTGCTCGTGGTCTAAATGTTCCAAACGTAGATTTAGTTATACAGTGCCATCCTCCACGGGATATTAAAGACTATATTCACCGTTCAGGTCGAACTGGTCGAGCCGATCGAAGTGGTACTTCCATCTGTTTTTATACTTACAAGGAACGTATTATGCTTTCCAGGATTGAAAACATGGCGGGGATAACATTTCGCC]

[+] EMBL CD144032             [CATGTTGTCCTAG ATGAGGTGGATCGTATGCTGGATATGGGTTTCAGTAAAGATGTGGAAAGTATTTTGTCAAAAATATATAACAGCGAAAATTCTGAAAAACCTCAGACTCTTCTTTTCTCCGCTACAATGCCTTCATGGGTTTCAGAGATATCAAGATGTTATCTTTCAGATGATGCCTTACACTTATCTTTAATAGATGAACAAGAAACGAAAACTTCCACCAATGTTACACATTTAGCTCTTTTGTGCCCTTATGAATCACGTGCAGCTACGTTATCAGATGTCATAAAAGTTTA                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CD144023             [        CCAAGAATGAGTTGGATCGTATGCTGGATATGGGTTTCAGTAAAGATGTGGAAAGTATTTTGTCAAAAATATATAACAGCGAAAATTCTGAAAAACCTCAGACTCTTCTTTTCTCCGCTACAATGCCTTCATGGGTTTCAGAGGTATCAAGATGTTATCTTTCAGATGATGCCTTACACTTATCTTTAATAGATGAACAAGAAACGAAAACTTCCAGCAATGTTACACATTTAGCTCTTTTGTGCCCTTATGAATCACGTGCAGCTACGTTATCAGATGTCATAAAAGTT                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD143987             [        CCTAG ATGCGGTGGATCGTATGCTGGATATGGGTTTCAGTAAAGATGTGGAAAGTATTTTGTCAAAAATATATAACAGCGAAAATTCTGAAAAACCTCAGACTCTTCTTTTCTCCGCTACAATGCCTTCATGGGTTTCAGAGATATCAAGATGTTATCTTTCAGATGATGCCTTACACTTATCTTTAATAGATGAACAAGAAACGAAAACTTCCACCAATGTTACACATTTAGCTCTTTTGTGCCCTTATGAATCACGTGCAGCTACGTTATCAGATGTCATAAAAGTTTA                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD144022             [        CCTAG ATGAGGTGGATCGTATGCTGGATATGGGTTTCAGTAAAGATGTGGAAAGTATTTTGTCAAAAATATATAACAGCGAAAATTCTGAAAAGCCTCAGACTCTTCTTTTCTCCGCTACAATGCCTTCATGGGTTTCAGAGATATCAAGATGTTATCTTTCAGATGATGCCTTACACTTATCTTTAATAGATGAACAAGAAACGAAAACTTCCACCAATGTTACACATTTAGCTCTTTTGTGCCCTTATGAATCACGTGCAGCTACGTTATCAGATGTCATAAAAGTTTA                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CD143977             [         CTAG ATGAGGTGGATCGTATGCTGGATATGGGTTTCAGTAAAGATGTGGAAAGTATTTTGTCAAAAATATATAACAGCGAAAATTCTGAAAAACCTCAGACTCTTCTTTTCTCCGCTACAATGCCTTCATGGGTTACAGAGATATCAAGATGTTATCTTTCAGATGATGCCTTACACTTATCTTTAATAGATGAACAAGAAACGAAAACTTCCACCAATGTTACACATTTAGCTCTTTTGTGCCCTTATGAATCACGTGCAGCTACGTTATCAGATGTCATAAAAGTTTATTGCAAGGGTCGAGGAG GA                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD143975             [         CTAG ATGAGGTGGATCGTATGCTGGATATGGGTTTCAGTAAAGATGTGGAAAGTATTTTGTCAAAAATATATAACAGCGAAAATTCTGAAAAACCTCAGACTCTTCTTTTCTCCGCTACAATGCCTTCATGGGTTTCAGAGATATCAAGATGTTATCTTTCAGATGATGCCTTACACTTATCTTTAATAGATGAACAAGAAACGAAAACTTCCACCAATGTTACACATTTAGCTCTTTTGTGCCCTTATGAATCACGTGCAGCTACGTTATCAGATGTCATAAAAGTTTAT                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD143992             [         CTAG ATGAGGTGGATCGTATGCCGGATATGGGTTTCAGTAAAGATGTGGAAAGTATTTTGTCAAAAATATATAACAGCGAAAATTCTGAAAAACCTCAGACTCTTCTTTTCTCCGCTACAATGCCTTCATGGGTTTCAGAGATATCAAGATGTTATCTTTCAGATGATGCCTTACACTTATCTTTAATAGATGAACAAGAAACGAAAACTTCCACCAATGTTACACATTTAGCTCTTTTGTGCCCTTATGAATCACGTGCAGCTACGTTATCAGATGTCATAAAAGTTTAT                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD144001             [         CTAG ATGAGTTGGATCGTATGCTGGATATGGGTTTCAGTAATGATGTGGAAAGTATTTTGTCAAAAATATATAACAGCGAAAATTCTGAAAAACCTCAGACTCTTCTTTTCTCCGCTACAATGCCTTCATGGGTTTCAGAGATATCAAGATGTTATCTTTCAGATGATGCCTTACACTTATCTTTAATAGATGAACAAGAAACGAAAACTTCCACCAATGTTACACATTTAGCTCTTTTGTGCCCTTATGAATCACGTGCAGCTACGTTATCAGATGTCATAAAAGTTTAT                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD144019             [         CTAG ATGAGGTGGATCGTATGCTGGATATGGGTTTCAGTAAAGATGTGGAAAGTATTTTGTCAAAAATATATAACAGCGAAAATTCTGAAAAACCTCAGACTCTTCTTTTCTCCGCTACAATGCCTTCATGGGTTTCAGAGATATCAAGATGTTATCTTTCAGATGATGCCTTACACTTATCTTTAATAGATGAACAAGAAACGAAAACTTCCACCAATGTTACACATTTAGCTCTTTTGTGCCCTTATGAATCACGTGCAGCTACGTTATCAGATGTCATAAAAGTTTAT                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD144018             [         CTAG ATGAGGTGGATCGTATGCTGGATATGGGTTTCAGTAAAGATGTGGAAAGTATTTTGTCAAAAATATATAACAGCGAAAATTCTGAAAAACCTCAGACTCTTCTTTTCTCCGCTACAATGCCTTCATGGGTTTCAGAGATATCAAGATGTTATCTTTCAGATGATGCCTTACACTTATCTTTAATAGATGAACAAGAAACGAAAACTTCCACCAATGTTACACATTTAGCTCTTTTGTGCCCTTATGAATCACGTGCAGCTACGTTATCAGATGTCATAAAAGTTTAT                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD144028             [         CTAG ATGAGGTGGATCGTATGCTGGATATGGGTTTCAGTAAAGATGTGGAAAGTATTTTGTCAAAAATATACAACAGCGAAAATTCTGAAAAACCTCAGACTCTTCTTTTCTCCGCTACAATGCCTTCATGGGTTTCAGAGATATCAAGATGTTATCTTTCAGATGATGCCTTACACTTATCTTTAATAGATGAACAAGAAACGAAAACTTCCACCAATGTTACACATTTAGCTCTTTTGTGCCCTTATGAATCACGTGCAGCTACGTTATCAGATGTCATAAAAGTTTAT                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD143961             [         CTAG ATGAGGTGGATCGTATGCTGGATATGGGTTTCAGTAAAGATGTGGAAAGTATTTTGTCAAAAATATATAACAGCGAAAATTCTGAAAAACCTCAGACTCTTCTTTTCTCCGCTACAATGCCTTCATGGGTTTCAGAGATATCAAGATGTTATCTTTCAGATGATGCCTTACACTTATCTTTAATAGATGAACAAGAAACGAAAGCTTCCACCAATGTTACACATTTAGCTCTTTTGTGCCCTTATGAATCACGTGCAGCTACGTTATCAGATGTCATAAAAGTTTAT                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD144016             [         CTAG ATGAGGTGGATCGTATGCTGGATATGGGTTTCAGTAAAGATGTGGAAAGTATTTTGTCAAAAATATATAACAGCGAAAATTCTGAAAAACCTAAGACTCTTCTTTTCTCCGTTACAATGCCTTCATGGGTTTCAGAGATATCAAGATGTTATCTTTCAGATGATGCCTTACACTTATCTTTAATAGGTGAACAAGAAACGAAAACTTCCACCAATGTTACACATTTAGCTCTTTTGTGCCCTTATGAATCACGTGCAGCTACGTTATCAGATGTCATAAAAGTTTAT                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD143968             [         CTAG ATGAGGTGGATCGTATGCTGGATATGGGTTTCAGTAAAGATGTGGAAAGTATTTTGTCAAAAATATATAACAGCGAAAATTCTGAAAAACCTCAGACTCTTCTTTTCTCCGCTACAATGCCTTCATGGGTTTCAGAGATATCAAGATGTTATCTTTCAGATGATGCCTTACACTTATCTTTAATAGATGAACAAGAAACGAAAACTTCCACCAATGTTACACATTTAGCTCTTTTGTGCCCTTATGAATCACGTGCAGCTACGTTATCAGATGTCATAAAAGTTTAT                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD144031             [         CTAG ATGAGGTGGATCGTATGCTGGATATGGGTTTCAGTAAAGATGTGGAAAGTATTTTGTCAAAAATATATAACAGCGAAAATTCTGAAAAACCTCAGACTCTTCTTTTCTCCGCTACAATGCCTTCATGGGTTTCAGAGATATCAAGATGTTATCTTTCAGATGATGCCTTACACTTATCTTTAATAGATGAACAAGAAACGAAAACTTCCACCAATGTTACACATTTAGCTCTTTTGTGCCCTTATGAATCACGTGCAGCTACGTTATCAGATGTCAT AAAGTTTAT                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD143978             [         CTAG ATGAGGTGGATCGTATGCTGGATATGGGTTTCAGTAAAGATGTGGAAAGTATTTTGTC AAAATATATAACAGCGAAAATTCTGAAAAACCTCAGACTCTTCTTTTCTCCGCTACAATGCCTTCATGGGTTTCAGAGATATCAAGATGTTATCTTTCAGATGATGCCTTACACTTATCTTTAATAGATGAACAAGAAACGAAAACTTCCACCAATGTTACACATTTAGCTCTTTTGTGCCCTTATGAATCACGTGCAGCTACGTTATCAGATGTCATAAAAGTTTAT                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD143973             [         CTAG ATGAGGTGGATCGTATGCTGGATATGGGTTTCAGT AAGATGTGGAAAGTATTTTGTCAAAAATATATAACAGCGAAAATTCTGAAAAACCTCAGACTCTTCTTTTCTCCGCTACAATGCCTTCATGGGTTTCAGAGATATCAAGACGTTATCTTTCAGATGATGCCTTACACTTATCTTTAATAGATGAACAAGAAACGAAAACTTCCACCAATGTTACACATTTAGCTCTTTTGTGCCCTTATGAATCACGTGCAGCTACGTTATCAGATGTCATAAAAGTTTAT                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD127677             [                                                                                                                                                                       aggtAGATGATGCTCTACACTTATCTTTAATAGATGAACAAGAAACGAAAACTTCCACCAATGTTACACATTTAGCTCTTTTGTGCCCTTATGAATCACGTGCAGCTACGTTATCAGATGTCATAAAAGTTTATTGCAAGGGTCGA GAGTCGAGATGCATTGTGTTTTGTGAACGCAAAAAGGACGCAGACGAGTTATCTGCAAGTGATGCTATGTCAGGTGATTGTCATGTTCTTCATGGAAGTGTTCCACAAGACAAACGAGAGTTAGTTCTTCAAAGATTCCGTGACGGTAAATACAGGACGCTGCTGACAACTAACGTGGCTGCTCGTGGTCTAAATGTTCCAAACGTAGATTTAGTTATACAGTGCCATCCTCCACGGGATATTAAAGACTATATTCACCGTTCAGGTCGAACTGGTCGAGCCGATCGAAGTGGTACTTCCATCTGTTTTTATACTTACAAGGAACGTATTATGCTTTCCAGGATTGAAAACATGGCGGGGATAACATTTCGCC]




>consensus_10865#1
CATGTTGTCCTAGATGAGGTGGATCGTATGCTGGATATGGGTTTCAGTAAAGATGTGGAA
AGTATTTTGTCAAAAATATATAACAGCGAAAATTCTGAAAAACCTCAGACTCTTCTTTTC
TCCGCTACAATGCCTTCATGGGTTTCAGAGATATCAAGATGTTATCTTTCAGATGATGCC
TTACACTTATCTTTAATAGATGAACAAGAAACGAAAACTTCCACCAATGTTACACATTTA
GCTCTTTTGTGCCCTTATGAATCACGTGCAGCTACGTTATCAGATGTCATAAAAGTTTAT
TGCAAGGGTCGAGGAGGAAGATGCATTGTGTTTTGTGAACGCAAAAAGGACGCAGACGAG
TTATCTGCAAGTGATGCTATGTCAGGTGATTGTCATGTTCTTCATGGAAGTGTTCCACAA
GACAAACGAGAGTTAGTTCTTCAAAGATTCCGTGACGGTAAATACAGGACGCTGCTGACA
ACTAACGTGGCTGCTCGTGGTCTAAATGTTCCAAACGTAGATTTAGTTATACAGTGCCAT
CCTCCACGGGATATTAAAGACTATATTCACCGTTCAGGTCGAACTGGTCGAGCCGATCGA
AGTGGTACTTCCATCTGTTTTTATACTTACAAGGAACGTATTATGCTTTCCAGGATTGAA
AACATGGCGGGGATAACATTTCGCC

consensusID : consensus_10865#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 623
fasta sequence

                              [TCGAGCCAANAATTCGGCACGAGGTGTGTTTTGTGAACGCAAAAAGGACGCAGACGAGTTATCTGCAAGTGATGCTATGTGAGGTGATTGTCATGTTCTTCATGGAAGTGTTCCACAAGACAAACGAGAGTTAGTTCTTCAAAGATTCCGTGACGGTAAATACAGGACGCTGCTGACAACTAACGTGGCTGCTCGTGGTCTAGATGTTCCAAACGTAGATTTAGTTATACAGTGCCATCCTCCACGGGATATTGAAGACTATATTCACCGTTCAGGTCGAACTGGTCGAGCCGATCGAAGTGGTACTTCCATCTGTTTTTATACTTACAAGGAACGTAGTATGCTTTCCAGGATTGAAAACATGGCGGGTATAACATTTCGCCGCATATCTGCACCTACTATTAACGACATAACTACTGCTTGGGGTGAAGAAATTTTAAAAACATTCTCCAATGTGCCCAAATCTACTTGGTCCACGTTTGTACCTTTGGCCTTATCCATTGCAAACCAGCTTGCACAAAACTCAAAAACTGGGAAAGTGAAAAAAGATTCTTGTGACGACTTANGGGTTGATGATGATAAGACACCTGGTCGTAAGCCTAAATCTAAAGACATACTTCGTG]

[+] EMBL CD082530             [TCGAGCCAANAATTCGGCACGAGGTGTGTTTTGTGAACGCAAAAAGGACGCAGACGAGTTATCTGCAAGTGATGCTATGTGAGGTGATTGTCATGTTCTTCATGGAAGTGTTCCACAAGACAAACGAGAGTTAGTTCTTCAAAGATTCCGTGACGGTAAATACAGGACGCTGCTGACAACTAACGTGGCTGCTCGTGGTCTAGATGTTCCAAACGTAGATTTAGTTATACAGTGCCATCCTCCACGGGATATTGAAGACTATATTCACCGTTCAGGTCGAACTGGTCGAGCCGATCGAAGTGGTACTTCCATCTGTTTTTATACTTACAAGGAACGTAGTATGCTTTCCAGGATTGAAAACATGGCGGGTATAACATTTCGCCGCATATCTGCACCTACTATTAACGACATAACTACTGCTTGGGGTGAAGAAATTTTAAAAACATTCTCCAATGTGCCCAAATCTACTTGGTCCACGTTTGTACCTTTGGCCTTATCCATTGCAAACCAGCTTGCACAAAACTCAAAAACTGGGAAAGTGAAAAAAGATTCTTGTGACGACTTANGGGTTGATGATGATAAGACACCTGGTCGTAAGCCTAAATCTAAAGACATACTTCGTG]




>consensus_10865#2
TCGAGCCAANAATTCGGCACGAGGTGTGTTTTGTGAACGCAAAAAGGACGCAGACGAGTT
ATCTGCAAGTGATGCTATGTGAGGTGATTGTCATGTTCTTCATGGAAGTGTTCCACAAGA
CAAACGAGAGTTAGTTCTTCAAAGATTCCGTGACGGTAAATACAGGACGCTGCTGACAAC
TAACGTGGCTGCTCGTGGTCTAGATGTTCCAAACGTAGATTTAGTTATACAGTGCCATCC
TCCACGGGATATTGAAGACTATATTCACCGTTCAGGTCGAACTGGTCGAGCCGATCGAAG
TGGTACTTCCATCTGTTTTTATACTTACAAGGAACGTAGTATGCTTTCCAGGATTGAAAA
CATGGCGGGTATAACATTTCGCCGCATATCTGCACCTACTATTAACGACATAACTACTGC
TTGGGGTGAAGAAATTTTAAAAACATTCTCCAATGTGCCCAAATCTACTTGGTCCACGTT
TGTACCTTTGGCCTTATCCATTGCAAACCAGCTTGCACAAAACTCAAAAACTGGGAAAGT
GAAAAAAGATTCTTGTGACGACTTANGGGTTGATGATGATAAGACACCTGGTCGTAAGCC
TAAATCTAAAGACATACTTCGTG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10865#0      ------------------------------------------------------------
consensus_10865#2      TCGAGCCAANAATTCGGCACGAGGTGTGTTTTGTGAACGCAAAAAGGACGCAGACGAGTT 60
consensus_10865#1      ------------------------------------------------------------
                                                                                   

consensus_10865#0      -----------------------------------------------------------A 1
consensus_10865#2      ATCTGCAAGTGATGCTATGTGAGGTGATTGTCATGTTCTTCATGGAAGTGTTCCACAAGA 120
consensus_10865#1      ------------------------------------------------------------
                                                                                   

consensus_10865#0      CCAGCCANAATTTGGCACGAGGAGCTTCCGTGACGGTAAATACAGGACGCTGCTGACAAC 61
consensus_10865#2      CAAACGAGAGTTAGTTCTTCAAAGATTCCGTGACGGTAAATACAGGACGCTGCTGACAAC 180
consensus_10865#1      ------------------------------------------------------------
                                                                                   

consensus_10865#0      TAACGTGGCTGCTCGTGGTC-TAGATGTTCCAAACGTAGATTTAGTTATACAGTGCCATC 120
consensus_10865#2      TAACGTGGCTGCTCGTGGTC-TAGATGTTCCAAACGTAGATTTAGTTATACAGTGCCATC 239
consensus_10865#1      -----------CATGTTGTCCTAGATG------AGGTGGATCGTATGCTGGA-TATGGGT 42
                                  *  ** *** ******      * ** ***    *  *  * *      

consensus_10865#0      CTCCACGGGATATTGAAGACTATATTCACCGTTCAGGTCGAACTGGTCGAGCCGATCGAA 180
consensus_10865#2      CTCCACGGGATATTGAAGACTATATTCACCGTTCAGGTCGAACTGGTCGAGCCGATCGAA 299
consensus_10865#1      TTCAGTAAAGATGTGGAAAGTAT-TTTGTCAAAAATATATAACAG--CGAAAATTCTGAA 99
                        **          ** * * *** **   *    *  *  *** *  ***       ***

consensus_10865#0      GTGGTACTTCCATCTGTTTTTATACTTACAAGGAACGTAGTATGCTTTCCAGGATTGAAA 240
consensus_10865#2      GTGGTACTTCCATCTGTTTTTATACTTACAAGGAACGTAGTATGCTTTCCAGGATTGAAA 359
consensus_10865#1      ---AAACCTCAGACTCTTCTTTTCTCCGC--------TACAATGCCTTCATGGGTTTCAG 148
                            ** **   ** ** ** *     *        **  **** ***  ** **  * 

consensus_10865#0      ACATGGCGGG-TATAACATTTCGCCGCATATCT-GCACCTACTATTAACGACATAACTAC 298
consensus_10865#2      ACATGGCGGG-TATAACATTTCGCCGCATATCT-GCACCTACTATTAACGACATAACTAC 417
consensus_10865#1      AGATATCAAGATGTTATCTTTCAGATGATGCCTTACACTTATCTTTAATAGATGAACAA- 207
                       * **  *  * * * *  ****     **  **  *** **   ****      *** * 

consensus_10865#0      TGCTTGGGGTGAAGAAATTTTAAAAACATTCTCCAATGTGCCCAAATCTACTTGGTCCAC 358
consensus_10865#2      TGCTTGGGGTGAAGAAATTTTAAAAACATTCTCCAATGTGCCCAAATCTACTTGGTCCAC 477
consensus_10865#1      -----GAAACGAA-AACTTCCACCAATGTTACACATTTAGCTCTTTTGTGCCCTTATGAA 261
                            *    *** ** **  *  **  **   ** *  ** *   * * *       * 

consensus_10865#0      GTTTGTACCTTTGGCCTTATCCATTG-CAAACCAGCTTGC-ACAAAACTCAAAAACTGGG 416
consensus_10865#2      GTTTGTACCTTTGGCCTTATCCATTG-CAAACCAGCTTGC-ACAAAACTCAAAAACTGGG 535
consensus_10865#1      TCACGTGCAGCTA-CGTTATCAGATGTCATAAAAGTTTATTGCAAGGGTCGAGGA---GG 317
                           ** *   *  * *****   ** ** *  ** **    ***   ** *  *   **

consensus_10865#0      AAAGTGAAAAAAGATTCTTGTGACGACTTAGGGGTTGATGATGATAAGACACCTGGTCGT 476
consensus_10865#2      AAAGTGAAAAAAGATTCTTGTGACGACTTANGGGTTGATGATGATAAGACACCTGGTCGT 595
consensus_10865#1      AAGATGCATTGTG--TTTTGTGAACGCAAAAAG---GACGCAGACGAGTTATCTGCAAGT 372
                       **  ** *    *  * ******   *  *  *   ** *  **  **  * ***   **

consensus_10865#0      AAGCCTAAATCTAAAGACATACTTCGTGTTCTTTGTTGTGCATTAGCTTGCCTAAGTGGC 536
consensus_10865#2      AAGCCTAAATCTAAAGACATACTTCGTG-------------------------------- 623
consensus_10865#1      GATGCTATGTC---AGGTGATTGTCATGTTCTTCATGG--AAGTGTTCCACAAGACAAAC 427
                        *  ***  **   **       ** **                                

consensus_10865#0      AAAGAAGGTGCAGTTGAAAGTCGCTCAGCGCTCACGGCACAGATAGGTAAAACAGCCTAT 596
consensus_10865#2      ------------------------------------------------------------
consensus_10865#1      GAGAGTTAGTTCTTCAAAGATTCCGTGACGGTAAATACA-GGACGCTGCTGACAACTAAC 486
                                                                                   

consensus_10865#0      AAGCTTGAGTTGAATTTTATTGCACGAAGCAAGGGACTAGCCTTCGCTACATTACGAAAC 656
consensus_10865#2      ------------------------------------------------------------
consensus_10865#1      GTGGCTGCTCGTGGTCTAAATGTTCCAAACG------TAGATTTAGTTA---TACAGTGC 537
                                                                                   

consensus_10865#0      CACTTACCGGAAAACATTGTGAACAGTGTTCATAGTCTAAGTTTCATTCGT-GGGAAAAT 715
consensus_10865#2      ------------------------------------------------------------
consensus_10865#1      CATCCTCCACGGGATATTAAAGACTATATTCACCGTTCAGGTCGAACTGGTCGAGCCGAT 597
                                                                                   

consensus_10865#0      GGGATACGTG-TTCGATCTGCCTTCAGAGC-ATGATGAATTTGTAAAGTCGACATGGCCA 773
consensus_10865#2      ------------------------------------------------------------
consensus_10865#1      CGAAGTGGTACTTCCATCTGTTTTTATACTTACAAGGAACGTATTATGCTTTCCAGGATT 657
                                                                                   

consensus_10865#0      AATGATGCACAAGCTAAACTATCACTACTTTCTAAAATCCCAGAATTAGAAGAGGAAGAA 833
consensus_10865#2      ------------------------------------------------------------
consensus_10865#1      GAAAACATGGCGGGGATAACATTTCGCC-------------------------------- 685
                                                                                   

consensus_10865#0      TTTTTCAATCAAGGTCGTTCAGGAAATTATGGATCTTGGCAGAGTCGATTTAACGGCGGT 893
consensus_10865#2      ------------------------------------------------------------
consensus_10865#1      ------------------------------------------------------------
                                                                                   

consensus_10865#0      TCGAGACAGTCATTTAAACGTTCTTATAATAGTGGTACTTTCAATAGTTCATTCAGAAGT 953
consensus_10865#2      ------------------------------------------------------------
consensus_10865#1      ------------------------------------------------------------
                                                                                   

consensus_10865#0      TCAAAGTCCTTTAAATTTGATAACAGTTGAATAAACA 990
consensus_10865#2      -------------------------------------
consensus_10865#1      -------------------------------------