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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10871#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 23 consensus length = 1405 fasta sequence
[CAACATCCTAGAGGCAAACATGATTGGTATTGCTTTCAGTGT-CATAGACCGGGTGAAGTTTTACGCTGTCTCGTTTGTTTCCGTGTATATCATTCTGATTGTGTTCAAGAAGCATCTGGTCCTAATAGTCCATCAAGAAAGTCTATGCGTTCACCGACTCTTCATGATGGACAGGAAGATAATTTTACTTGTCCTGTATGCGAATCTCGACCAAAATGTGAATTCTCCCGCAAACAGATAAGGAAGCTATTGGAATTTGCAACCCATCAATTGAGGAAGCAGCCATTATGGAAAACATTTATTCAAGTTGGTTATAAAGGTGAAATAACAAAAAATGAGTACCTTGTGTATAAGTACACTGATCTAGAGTTATTGCAACGCAAGATAAAAGATGGTCGGTATGCTGCCCTAGAGGAATTTTCTATGGATGTACAATTGCTTGTTCATGATGTCTGCATTCTTCATGGCCCTTATAGTAATCAGGCCGATGAGATACGATTTTTCTTTCGATCTGTTAATGCAGAATTAAATGAAATTCAACTGTGTACTGACTGTTATATCAATGCTAAGGCTCGTGTAACAGACTGGATTAGTAAACCCTGCAAACCACGTCATGAACTGATATGGGCACGCAATCGCACATCAGCAGGCGCTGGCCTGTTTAACGATACTTCAGTCTCTCAGTTCTATTGGCCTGCAAAAGTTTTGTTGGAGCGCGATGATGGATATGAGATACGCTTCTTTGGAGGCTCCCATGAGCGGATGTTCGTAAAGAAAGCCCATACTCGTGCTTTTCACCTCCCAGCTGATGAAGTTGGTGTACTTCGACGTTCAAACGCGACGGGTGCGATCTCAGGTGGAGGATTTGAGCGAGCTTGGAATGAAGTTAGTAAATTACAAGCTAACATCGATAGTGGATATTACACGCATTCTTCTGGTGAAAGCGATCTTCCGCCATCTGATGATGATTATTCAGATGAAATGTATCTTGGTCCGCGGCGTAAAACCCTCATCCAGAACCAACGTTCACATCGTGCAGATAGTCCTAGATCGTCTCTTACTTCTGGCAATACCAAGGCTAATAAGAGAAGGCGTCACACTTCTTCAAGCAGTCATCAAACAACTACTAGTGATACTCCTACTGGTGGCTCACCCGCTCGTGATGCCTCACCATGTACTCATGGTGGCAAGCACTTCAGAACTCATGGTCTTTTGCTTAATTCGCACACCGATCCTACTGACAAAAGATTGGCGAGTAATCGTCTCCCAATGCCGGTTGTTCAACCCGGTACTCCAGGCGCTGCAGCTATATCCGCCTTAGCAGAGACAAAAGCAGCTATGGCAGCTGCAGTTGGGTCTGGTCGTAGGCCCGCTGGATCATTTACTGCTGACCTCTTATCTTTGA]
[+] EMBL CD187940 [CAACATCCTAGAGGCAAACATGATTGGTATTGCTTTCAGTGT CATAGACCGGGTGAAGTTTTACGCTGTCTCGATTGTTTCCGTGTATATCATTCTGATTGTGTTCAAGAAGCATCTGGTCCTAATAGTCCATCAAGAAAGTCTATGCGTTCACCGACTCTTCATGATGGACAGGAAGATAATTTTACTTGTCCTGTATGCGAATCTCGACCAAAATGTGAATTCTCCCGCAAACAGATAAGGAAGCTATTGGAATTTGCAACCCATCAATTGAGGAAGCAGCCATTATGGAAAACATTTATTCAAGTTGGTTATAAAGGTGAAATAACAAAAAATGAGTACCTTGTGTATAAGTACACTGATCTAGAGTTATTGCAACGCAAGATAAAAGATGGTCGGTATGCTGCCCTAGAGGAATTTTCTATGGATGTA ]
[-] EMBL CD198834 [ aaaaatGAGGCAAACATGATTGGTATTGCTTTCAGTGT CATAGACCGGGTGAAGTTTTACGCTGTCTCGTTTGTTTCCGTGTATATCATTCTGATTGTGTTCAAGAAGCATCTGGTCCTAATAGTCCATCAAGAAAGTCTATGCGTTCACCGACTCTTCATGATGGACAGGAAGATAATTTTACTTGTCCTGTATGCGAATCTCGACCAAAATGTGAATTCTCCCGCAAACAGATAAGGAAGCTATTGGAATTTGCAACCCATCAATTGAGGAAGCAGCCATTATGGAAAACATTTATTCAAGTTGGTTATAAAGGTGAAATAACAAAAAATGAGTACCTTGTGTATAAGTACACTGAACTAGAGTTATTGCAACGCAAGA ]
[-] EMBL CD199020 [ TGGTATTGC TTCAGTGTNCATAGAGCGGGTGAAGTTTTACGCTGTCTCGTTTGTTTCCGTGTATATCATTCTGATTGTGTTCAAGAAGCATCTGGTCCTAATAGTCCATCAAGAAAGTCTATGCGTTCGCCGACTCTTCATGATGGACAGGAAGATAATTTTACTTGTCCTGTATGCGAATCTCGACCAAAATGTGAATTCTCCCGCAAACAGATAAGGAAGCTATTGGAATTTGCAACCCATCAATTGAGGAAGCAGCCATTATGGCAAACATTTATTCAAGTTGGTTATAAAGGTGAAATAACAAAAAATGAGTACCTTGTGTATAAGTACACTGATCTAGAGTTATTGCAACGCAAGA ]
[-] EMBL CD198898 [ GTATTGCTTTCAGTGT CATAGACCGGGTGAAGTTNTACGCTGTCTCGTTTGTTTCCGTGTATATCATTCTGATTGTGTTCAAGAAGCATCTGGTCCTAATAGTCCATCAAGAAAGTCTATGCGTTCACCGACTCTTCATGATGGACAGGAAGATAATTTTACTTGTCCTGTATGCGAATCTCGACCAAAATGTGAATTCTCCCGCAAACAGATAAGGAAGCTATTGGAATTTGCAACCCATCAATTGAGGAAGCAGCCATTATGGAAAACATTTATTCAAGTTGGTTATAAAGGTGAAATAACAAAAAATGAGTACCTTGTGTATAAGTACACTGATCTAGAGTTATTGCAACGCAAGA ]
[-] EMBL CD097360 [ TATTGCTTTCAGTGT CATAGACCGGGTGAAGTTTTACGCTGTCTCGATTGTTTCCGTGTATATCATTCTGATTGTGTTCAAGAAGCATCTGGTCCTAATAGTCCATCAAGAAAGTCTGTGCGTTCACCGACTCTTCATGATGGACAGGAAGATAATTTTACTTGTCCTGTATGCGAATCTCGACCAAAATGTGAATTCTCCCGCAAACAGATAAGGAAGCTATTGGAATTTGCAACCCATCAATTGAGGAAGCAGCCATTATGGAAAACATTTATTCAAGTTGGTTATAAAGGTGAAATAACAAAAAATGAGTACCTTGTGTATAAGTACACTGATCTAGAGTTATTGCAACGCAAGATAAAAGATGGTCGGTATGCTGCCCTAGAGGAATTTTCTATGGATGTACAATTGCTTGTTCATGATGTCTG ]
[-] EMBL CD097361 [ TATTGCTTTCAGTGT CATAGACCGGGTGAAGTTTTACGCTGTCTCGATTGTTTCCGTGTATATCATTCTGATTGTGTTCAAGAAGCATCTGGTCCTAATAGTCCATCAAGAAAGTCTGTGCGTTCACCGACTCTTCATGATGGACAGGAAGATAATTTTACTTGTCCTGTATGCGAATCTCGACCAAAATGTGAATTCTCCCGCAAACAGATAAGGAAGCTATTGGAATTTGCAACCCATCAATTGAGGAAGCAGCCATTATGGAAAACATTTATTCAAGTTGGTTATAAAGGTGAAATAACAAAAAATGAGTACCTTGTGTATAAGTACACTGATCTAGAGTTATTGCAACGCAAGATAAAAGATGGTCGGTATGCTGCCCTAGAGGAATTTTCTATGGATGTACAATTGCTTGTTCATGATGTCTG ]
[-] EMBL CD198901 [ AGTTTTACGCTGTCTCGTTTGTTCCCGTGTATATCATTCTGATTGTGTTCAAGAAGCATCTGGTCCTAATAGTCCATCAAGAAAGTCTATGCGTTCACCGACTCTTCATGATGGACAGGAAGATAATTTTACTTGTCCTGTATGCGAATCTCGACCAAAATGTGAATTCTCCCGCAAACAGATAAGGAAGCTATTGGAATTTGCAACCCATCAATTGAGGAAGCAGCCATTATGGAAAACATTTATTCAAGTTGGTTATAAAGGTGAAATAACAAAAAATGAGTACCTTGTGTATAAGTACACTGATCTAGAGTTATTGCAACGCAAGA ]
[-] EMBL CD198905 [ TTTGTTCCCGTGTATATCATTCTGATTGTGTTCAAGAAGCATCTGGTCCTAATAGTCCATCAAGAAAGTCTATGCGTTCACCGACTCTTCATGATGGACAGGAAGATAATTTTACTTGTCCTGTATGCGAATCTCGACCAAAATGTGAATTCTCCCGCAAACAGATAAGGAAGCTATTGGAATTTGCAACCCATCAATTGAGGAAGCAGCCATTATGGAAAACATTTATTCAAGTTGGTTATAAAGGTGAAATAACAAAAAATGAGTACCTTGTGTATAAGTACACTGATCTAGAGTTAATGCAACGCAAGA ]
[-] EMBL CD199163 [ CATTCTGATNGTGTCAAAGAAGCATCTGGTCCTAATAGTCCATCAAGAAAGTCTATGCGTTCACCGACTCTTCATGATGGACAGGAAGATAATTTTACTTGTCCTGTATGCGAATCTCGACCAAAATGTGAATTCTCCCGCAAACAGATAAGGAAGCTATTGGGATTTGCAACCCATCAATTGAGGAAGCAGCCATTATGGAAAACATTTATTCAAGTTGGTTATAAAGGTGAAATAACAAAAAATGAGTACCTTGTGTATAAGTACACTGATCTAGAGTTATTGCAACGCAAGA ]
[-] EMBL CD199141 [ ATCTGGTCATAATAGTCCATCAAGAAAGTCTATGCGTTCACCGACTCTTCATGATGGACAGGAAGATAATTTTACTTGTCCTGTATGCGAATCTCGACCAAAATGTGAATTCTCCCGCAAACAGATAAGGAAGCTATTGGAATTTGCAACCCATCAATTGAGGAAGCAGCCATTATGGAAAACATTTATTCAAGTTGGTTATAAAGGTGAAATAACAAAAAATGAGTACCTTGTGTATAAGTACNCNGATCTAGAGTTATTGCAACGCAAGA ]
[-] EMBL CD199144 [ GTTCACCGACTCTTCATGATGGACAGGAAGATAA TTTACTTGTCCTGTATGCGAATCTCGACCAAAATGTGAATTCTCCCGCAAACAGATAAGGAAGCTATTGGAATTTGCAACCCATCAATTGAGGAAGCAGCCATTATGGAAAACATTTATTCAAGTTGGTTATAAAGGTGAAATAACAAAAAATGAGTACCTTGTGTATAAGTACACTGATCTAGAGTTATTGCAACGCAAGA ]
[+] EMBL CD111968 [ GAAGCAGCCATTATGGAAAACATTTATTCAAGTTGGTTATAAAGGTGAAATAACAAAAAATGAGTACCTTGTGTATAAGTACACTGATCTAGAGTTATTGCAACGCAAGATAAAAGATGGTCGGTATGCTGCCCTAGAGGAATTTTCTATGGATGTACAATTGCTTGTTCATGATGTCTGCATTCTTCATGGCCCTTATAGTAATCAGGCCGATGAGATACGATTTTTCTTTCGATCTGTTAATGCAGAATTAAATGAAATTCAACTGTGTACTGACTGTTATATCAATGCTAAGGCTCGTGTAACAGACTGGATTAGTAAACCCTGCAAACCACGTCATGAACTGATATGGGCACGCAATCGCACATCAGCAGGCGCTGGCCTGTTTAACGATACTTCAGTCTCTCAGTTCTATTGGCCTGCAAAAGTTTTGTTGGAGCGCGATGATGGATATGAGATACGCTTTCTTGGAGGCTCCCATG ]
[+] EMBL CD153952 [ ATATGGGCACGCAATCGCACATCAGCAGGCGCTGGCCTGTTTAACGATACTTCAGTCTCTCAGTTCTATTGGCCTGCAAAAGTTTTGTTGGAGCGCGATGATGGATATGAGATACGCTTCTTTGGAGGCTCCCATGAGCGGATGTTCATAAAGAAAGCCCATACTCGTGCTTTTCACCTCCCAGCTGATGAAGTTGGTGTACTTCGACGTTCAAACGCGACGGGTGCGATCTCAGGTGGAGGATTTGAGCGAGCTTGGAATGAAGTTAGTAAATTACAAGCTAACATCGATAGTGGATATTACACGCATTCTTCCGGTGAAAGCGATCTTCCGCCATCTGATGATGGTTATTCAGATGAAATGTATCTTGGTCCGCGGCGTAAAACCCTCATCCAGAACCAACGTTCACATCGTGCAGATAGTCCTAGATCGTCTCTTACTTCTGGCAATACCAAGGCTAATAAGAGAAGGCGTCACACTTCTTCAAGCAGTCATCAAACAACTACTAGTGATACTCCTACTGGTGGCTCACCCGCTCGTGATGCCTCACCATGTACTCATGGTGGCAAGCACTTCAGAACTCATGGTCTTT ]
[+] EMBL CD154102 [ ATATGGGCACGCAATCGCACATCAGCAGGCGCTGGCCTGTTTAACGATACTTCAGTCTCTCAGTTCTATTGGCCTGCAAAAGTTTTGTTGGAGCGCGATGATGGATATGAGATACGCTTCTTTGGAGGCTCCCATGGGCGGATGTTCGTAAAGAAAGCCCATACTCGTGCTTTTCACCTCCCAGCTGATGAAGTTGGTGTACTTCGACGTTCAAACGCGACGGGTGCGATCTCAGGTGGAGGATTTGAGCGAGCTTGGAATGAAGTTAGTAAATTACAAGCTAACATCGATAGTGGATATTACACGCATTCTTCTGGTGAAAGCGATCTTCCGCCATCTGATGATGATTATTCAGATGAAATGTATCTTGGTCCGCGGCGTAAAACCCTCATCCAGAACCAACGTTCACATCGTGCAGATAGTCCTAGATCGTCTCTTACTTCTGGCAATACCAAGGCTAATAAGAGAAGGCGTCACACTTCTTCAAGCAGTCATCANACAACTACTAGTGATACTCCTACTGGTGGCTCACCCGCTCGTGATGCCTCACCATGTACTCATGGTGGCAAGCACT ]
[-] EMBL CD096313 [ CACATCAGCAGGCGCTGGCCTGTTTAACGATACTTCAGTCTCTCAGTTCTATTGGCCTGCAAAAGTTNTGTTGGAGCGCGATGATGGATATGAGATACGCTTCTNTGGAGGCTCCCATGAGCGGATGTTCGTAAAGAAAGCCCATACTCGTGCTTTTCACCTCCCAGCTGATGAAGTTGGTGTACTTCGACGTTCAAACGCGACGGGTGCGATCTCAGGTGGAGGATTTGAGCGAGCTTGGAATGAAGTTAGTAAATTACAAGCTAACATCGATAGTGGATATTACACGCATTCTTCTGGTGAAAGCGATCTTCCGCCATCTGATGATGATTATTCAGATGAAATGTATCTTGGTCCGCGGCGTAAAACCCTCATCCAGAACCAACGTTCACATCGTGCAGATAGTCCTAGATCGTCTCTTACTTCTGGCAATACCAAGGCTAATAAGAGAAGGCGTCACACTTCTTCAAGCAGTCATCAAACAACTACTAGTGATACTCCTACTGGTGGCTCACCCGCTCGTGATGCCTCACCATGTACTCGTGGTGGCAAGCACTTCAGAACTCATGGTCTTTTGC ]
[+] EMBL CD195826 [ CATACTCGGGCTTTT ACCTCCCAGTGGATGAAGTTGGTGTACTTCGACGTTCAAACGCGACGGGTGCAATCTCAGGTGGAGGATTTGA ]
[-] EMBL CD125617 [ CGATCTCAGGTGGAGGATTTGAGCGAGC TGGAATGAAGTTAGTAAATTACAAGCTANCATCGATAGTGGATATTACACGCATTCTTCTGGTGAAAGCGATCTTCCGCCATCTGATGATGATTATTCAGATGAAATGTATCTTGGTCCGCGGCGTAAAACCCTCATCCAGAACCAACGTTCACATCGTGCAGATAGTCCTAGATCGTCTCTTACTT ]
[+] EMBL CD159256 [ TAGTAAATTACAAGCTAACATCGATAGTGGATATTACACGCATTCTTCTGGTGAAAGCGATCTTCCGCCATCTGATGATGATTATTCAGATGAAATGTATCTTGGTCCGCGGCGTAAAACCCTCATCCAGAACCAACGTTCACATCGTGCAGATAGTCCTAGATCGTCTCTTACTTCTGGCAATACCAAGGCTAATAAGAGAAGGCGTCACACTTCTTCAAGCAGTCATCAAACAACTACTAGTGATACTCCTACTGGTGGCTCACCCGCTCGTGATGCCTCACCATGTA ]
[+] EMBL CD159433 [ TAGTAAATTACAAGCTAACATCGATAGTGGATATTACACGCATTCTTCTGGTGAAAGCGATCTTCCGCCATCTGATGATGATTATTCAGATGAAATGTATCTTGGTCCGCGGCGTAAAACCCTCATCCAGAACCAACGTTCACATCGTGCAGATAGTCCTAGATCGTCTCTTACTTCTGGCAATACCAAGGCTAATAAGAGAAGGCGTCACACTTCTTCAAGCAGTCATCAAACAACTACTAGTGATACTCCTACTGGTGGCTCACCCGCTCGTGATGCCTCACCATGTA ]
[-] EMBL CD170782 [ AGTAAATTACAAGCTAACATCGATAGTGGATATTACACGCATTCTTCTGGTGAAAGCGATCTTCCGCCATCTGATGATGATTATTCAGATGAAATGTATCTTGGTCCGCGGCGTAAAACCCTCATCCAGAACCAACGTTCACATCGTGCAGATAGTCCTAGATCGTCTCTTACTTCTGGCAATACCAAGGCTAATAAGAGAAGGCGTCACACTTCTTCAAGCAGTCATCAAACAACTACTAGTGATACTCCTACTGGTGGCTCACCCGCTCGTGATGCCTCACCATGTAC ]
[+] EMBL CD071985 [ TTCAGATGAAATGTATCTTGGTCCGCGGCGTAAAACCCTCATCCAGAACCAACGTTCACATCGTGCAGATAGTCCTAGATCGTCTCTTACTTCTGGCAATACCAAGGCTAATAAGAGAAGGCGTCACACTTCTTCAAGCAGTCATCAAACAACTACTAGTGATACTCCTACTGGTGGCTCACCCGCTCGTGATGCCTCACCATGTACTCATGGTGGCAAGCACTTCAGAACTCATGGTCTTTTGCTTAATTCGCACACCGATCCTACTGACAAAAGATTGGCGAATAATCGTCTCCCAATGCCGGTTGTTCAACCCGGTACTCCAGGCGCTGCAGCTATATCCGCCTTAGCAGAGACAAAAGCAGCTATGGCAGCTGCAGTTGGGTCTGGTCGTAGGCCCGCTGGA ]
[-] EMBL CD182942 [ CTTCAAGCAGTCATCAAACAACTACTAGTGATACTCCTACTGGTGGCTCACCCGCTCGTGATGCCTCACCATGTACTCATGGTGGCAAGCACTTCAGAACTCATGGTCTTTTGCTTAATTCGCACACCGATCCTACTGACAAAAGATTGGCGAGTAATCGTCTCCCAATGCCGGTTGTTCAACCCGGTACTCCAGGCGCTGCAGCTATATCCGCCTTAGCAGAGACAAAAGCAGCTATGGCAGCTGCAGTTGGGTC ]
[+] EMBL BG931442 [ TCACCCGCTCGAGATGCCTCACCATGTACTCATGGTGGCAAGCACTTCAGAACTCATGGTCTTTTGCTTAATTCGCACACCGATCCTACTGACAAAAGATTGGCGAGTAATCGTCTACCAATGCCGGTTGTTCAACCCGGTACTCCAGGCGCTGCAGCTATATCCGCCTTAGCAGAGACAAAAGCAGCTATGGCAGCTGCAGTTGGGTCTGGTCGCACGCCCGCTGGATCATTTACTGCTGACCTCTTATCTTTGA]
clustalw multiple alignements is not computed in this case |
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||